View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13990_low_15 (Length: 246)
Name: NF13990_low_15
Description: NF13990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13990_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 7040877 - 7041073
Alignment:
| Q |
17 |
cacagatgaacgtgaaatttggtttgcactactactgaatcaaata----------------attgataccaggtattttaatttacgaagagaaaatgc |
100 |
Q |
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| T |
7040877 |
cacagatgaacgtgaaatttggtttgcactactactgaatcaaataacataacagatgaataattgataccaggtattttaatttacgaagagaaaatgc |
7040976 |
T |
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| Q |
101 |
tggggtgtctttgaggtgtttgacgagttttccaggagtcgcaaccttgaagagtaagaaatgaattaggagtggtaaattgaaatagataaagttt |
197 |
Q |
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| T |
7040977 |
tggggtgtctttgaggtgtttgacgagttttccaggagtcgcaaccttgaagagtaagaaatgaattaggagtggtaaattgaaatagataaagttt |
7041073 |
T |
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