View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13991_low_9 (Length: 234)
Name: NF13991_low_9
Description: NF13991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13991_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 5688169 - 5688392
Alignment:
| Q |
7 |
atcaccattaatataccacaaaatatttaagacatgagcaaatttcctccaccacttcacccttccggattaatagtaaagcaaaaacctaactagtatc |
106 |
Q |
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| T |
5688169 |
atcaccattaatataccacaaaatatttaagacatgagcaagtttcatccaccagttcacccttccggattaatagtaaagcaaaaacctaactagtatc |
5688268 |
T |
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| Q |
107 |
ttaattcgtcaatcttcttcgaatttgataaagttcacaaagaaatagtacatgtggcttatatactcagaagatgtattttaaattagaaattccacat |
206 |
Q |
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| T |
5688269 |
ttaattcgtcaatcttcttcgaatttgataaagttcacaaagaaatagtacatgtggcttatatactcagaagatgtattttaaattagaaattccacat |
5688368 |
T |
|
| Q |
207 |
gagctacataattctcgataattc |
230 |
Q |
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| T |
5688369 |
gagctacataatcctcgataattc |
5688392 |
T |
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