View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13993_low_23 (Length: 333)
Name: NF13993_low_23
Description: NF13993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13993_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-175
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 28032376 - 28032693
Alignment:
| Q |
1 |
tatttatatagttaattacttgagaaatgatcaaactcttacccactatgtgtctcaatggcttcaagctgtcgcaaaatgaaccataaccaataggttg |
100 |
Q |
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| T |
28032376 |
tatttatatagttaattacttgagaaatgatcaaactcttacccactatgtgtctcaatggcttcaagctgtcgcaaaatgaaccataaccaataggttg |
28032475 |
T |
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| Q |
101 |
ttatgtgccctggaactagtgctggtccaagaaatgcagggaaacctagtatcaaaatctcagaccaatgggcataaggtgctgcaagtgcaataggtgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
28032476 |
ttatgtgccctggaactagtgctggtccaagaaatgcagggaaacctagtatcaaaatctcagaccaatgggcataaggagctgcaagtgcaataggtgt |
28032575 |
T |
|
| Q |
201 |
tttgtattcatggtgaaccttgtggatattatcaaatgcccatttgttatggagcatcctatggaaccagtaatttacataatcttcaataataacgtaa |
300 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28032576 |
tttgtattcatggtgaaccttgtggatgttatcaaatgcccatttgttatggagcatcctatggaaccagtaatttacataatcttcaataataacgtaa |
28032675 |
T |
|
| Q |
301 |
actattaggtgccaaaac |
318 |
Q |
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|||||||||||||||||| |
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| T |
28032676 |
actattaggtgccaaaac |
28032693 |
T |
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