View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13993_low_34 (Length: 249)

Name: NF13993_low_34
Description: NF13993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13993_low_34
NF13993_low_34
[»] chr8 (3 HSPs)
chr8 (18-234)||(43845461-43845677)
chr8 (18-234)||(38896116-38896333)
chr8 (118-175)||(8565107-8565164)
[»] chr4 (3 HSPs)
chr4 (23-234)||(14137211-14137423)
chr4 (139-188)||(40687721-40687770)
chr4 (138-175)||(19163626-19163663)
[»] chr6 (6 HSPs)
chr6 (70-234)||(5041100-5041264)
chr6 (59-170)||(6766546-6766657)
chr6 (69-172)||(6775466-6775569)
chr6 (75-172)||(6757356-6757453)
chr6 (141-189)||(3550740-3550788)
chr6 (139-175)||(27580649-27580685)
[»] chr7 (3 HSPs)
chr7 (48-234)||(10704745-10704931)
chr7 (65-228)||(36363103-36363266)
chr7 (138-175)||(39694124-39694161)
[»] chr1 (1 HSPs)
chr1 (48-234)||(48129699-48129885)
[»] chr5 (2 HSPs)
chr5 (18-176)||(39073325-39073484)
chr5 (75-234)||(10685245-10685405)
[»] chr3 (3 HSPs)
chr3 (79-232)||(26084113-26084266)
chr3 (142-188)||(6985559-6985605)
chr3 (139-175)||(31770117-31770153)
[»] chr2 (4 HSPs)
chr2 (48-217)||(17568965-17569141)
chr2 (69-175)||(16241459-16241565)
chr2 (139-188)||(6728214-6728263)
chr2 (141-188)||(13415339-13415386)
[»] scaffold0351 (1 HSPs)
scaffold0351 (118-175)||(13442-13499)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 43845677 - 43845461
Alignment:
Q  18 aaaaggactactaaatgtacaatagtcaagtgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtat 117  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||     
T  43845677 aaaaggactactaaatgtacaacaatcaagtgagtaacaacaaaacggtgttagccgatacccaaacacgtaaggggattcaaccaccacacatgagtac 43845578  T
Q  118 caaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttactttttcaagtaattgataactagtgcattcataattattaaacaa 217  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  43845577 caaaaacaaaagaaacatgcctagctttcagccaccacaaaaaatgatattttactttttcaagtaactgataactagtgcattcctgattattaaacaa 43845478  T
Q  218 tctattatttctttcat 234  Q
    |||||||||||||||||    
T  43845477 tctattatttctttcat 43845461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 38896333 - 38896116
Alignment:
Q  18 aaaaggactactaaatgtacaat-agtcaagtgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagta 116  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||   ||||||    
T  38896333 aaaaggactactaaatgtacaaacagtcaagcgagtaacaacaaaacggtgctagccgataccctaacacatgaggggattcgaccaccacaattgagta 38896234  T
Q  117 tcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttactttttcaagtaattgataactagtgcattcataattattaaaca 216  Q
     |||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| | ||| |||||||    
T  38896233 ccaaaaacaaaagaaacatgtctagctttcatccaccacaaagaatgatactttactttttcaaataactgataactagtgcattcctgatttttaaaca 38896134  T
Q  217 atctattatttctttcat 234  Q
    ||||||||||| ||||||    
T  38896133 atctattatttttttcat 38896116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 8565164 - 8565107
Alignment:
Q  118 caaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttacttt 175  Q
    |||||||||||  |||||  ||||||||||||||||||||||| ||||| ||||||||    
T  8565164 caaaaacaaaaacaaccttactagctttcagccaccacaaagactgatactttacttt 8565107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 14137211 - 14137423
Alignment:
Q  23 gactactaaatgtacaat-agtcaagtgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaa 121  Q
    |||||||||||||||||  | || | |||||||||||||||| |||  |||||||||||||||| || ||||||||| ||||||||  ||||||| || |    
T  14137211 gactactaaatgtacaagcaatccaatgagtaacaacaaaacagtgcaagccgatacccaaacatattaggggattcgaccaccacaactgagtaccaga 14137310  T
Q  122 aacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttactttttcaagtaattgataactagtgcattcataattattaaacaatcta 221  Q
    |||||||  |  || | ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||| |||||||| |||    
T  14137311 aacaaaatgattctacttagctttcaaccaccacaaagaataatattttactttttcaagtaactgataactattgcattcatgatttttaaacaaccta 14137410  T
Q  222 ttatttctttcat 234  Q
    |||||||||||||    
T  14137411 ttatttctttcat 14137423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 40687721 - 40687770
Alignment:
Q  139 tagctttcagccaccacaaagaatgatattttactttttcaagtaattga 188  Q
    |||||||||||||||||||||||||||| |||||||| || | |||||||    
T  40687721 tagctttcagccaccacaaagaatgatactttactttatctaataattga 40687770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 19163663 - 19163626
Alignment:
Q  138 ctagctttcagccaccacaaagaatgatattttacttt 175  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  19163663 ctagctttcagccaccacaaagactgatactttacttt 19163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 234
Target Start/End: Original strand, 5041100 - 5041264
Alignment:
Q  70 agccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattt 169  Q
    ||||||||||||||||| | ||||||||| ||||| ||  ||| ||| |||||||||||  |  ||||||| ||||||||||||||||||||| ||||||    
T  5041100 agccgatacccaaacacttgaggggattcgaccactacaactgtgtaccaaaaacaaaactagtctgcctaactttcagccaccacaaagaataatattt 5041199  T
Q  170 tactttttcaagtaattgataactagtgcattcataattattaaacaatctattatttctttcat 234  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| ||||    
T  5041200 tactttttcaagtaattgataactagtgcattcctgatttttaaacaatctattatttctctcat 5041264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 6766546 - 6766657
Alignment:
Q  59 aaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaa 158  Q
    ||||| |||||| ||||||| ||||||||| ||||| ||| |||||| |   || ||| |||||||||||| ||||||| ||||||||| | ||||||||    
T  6766546 aaaacagtgttaaccgatactcaaacacattagggggttcgaccaccgcatttgggtaccaaaaacaaaagtaacctgcttagctttcaactaccacaaa 6766645  T
Q  159 gaatgatatttt 170  Q
    |||| |||||||    
T  6766646 gaataatatttt 6766657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 6775466 - 6775569
Alignment:
Q  69 tagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatatt 168  Q
    |||||||||||||||||||| ||||| ||| |||||||    |  ||| |||||||||||| ||||||| || |||||| | |||||||||||| |||||    
T  6775466 tagccgatacccaaacacattagggggttcgaccaccatatttaggtaacaaaaacaaaagtaacctgcttaactttcaacaaccacaaagaataatatt 6775565  T
Q  169 ttac 172  Q
    ||||    
T  6775566 ttac 6775569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 6757356 - 6757453
Alignment:
Q  75 atacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttac 172  Q
    |||||||||||||| ||||| ||| |||||||    || ||| |||||||||||| |||||   || ||||||||||||||||||||| |||||||||    
T  6757356 atacccaaacacattagggggttcgaccaccatatttgggtaccaaaaacaaaagtaacctatttaactttcagccaccacaaagaattatattttac 6757453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 3550740 - 3550788
Alignment:
Q  141 gctttcagccaccacaaagaatgatattttactttttcaagtaattgat 189  Q
    ||||||| |||||||||||||| |||||||||||| || |||| |||||    
T  3550740 gctttcaaccaccacaaagaataatattttactttgtctagtagttgat 3550788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 27580649 - 27580685
Alignment:
Q  139 tagctttcagccaccacaaagaatgatattttacttt 175  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  27580649 tagcttttagccaccacaaagaatgaaattttacttt 27580685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 234
Target Start/End: Complemental strand, 10704931 - 10704745
Alignment:
Q  48 tgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttca 147  Q
    |||| ||||||||||| ||||||||||||||| |||||||| || || ||| ||||||||   |  ||| ||||| |||||| ||| ||  || ||||||    
T  10704931 tgagaaacaacaaaacagtgttagccgatacctaaacacattagagggttcgaccaccacatttaggtaccaaaagcaaaagtaacatgtttatctttca 10704832  T
Q  148 gccaccacaaagaatgatattttactttttcaagtaattgataactagtgcattcataattattaaacaatctattatttctttcat 234  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||| ||||||| | ||| ||||||||   ||||||||||||||    
T  10704831 gccaccacaaagaataattttttactttttcaagtagttgataactattgcattcctgatttttaaacaactgattatttctttcat 10704745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 228
Target Start/End: Original strand, 36363103 - 36363266
Alignment:
Q  65 gtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatga 164  Q
    ||||||| ||||||||||| || | |||| |||| |||||||| |||||||| |||||||||||| | | ||  ||| ||||||||| |||||||||| |    
T  36363103 gtgttagtcgatacccaaaaacgtgagggaattcgaccaccacagctgagtaccaaaaacaaaagtagcatgattagttttcagccatcacaaagaataa 36363202  T
Q  165 tattttactttttcaagtaattgataactagtgcattcataattattaaacaatctattatttc 228  Q
    |||||||||||||||||||| |||| ||||  |||||  | ||| |||||||| ||||||||||    
T  36363203 tattttactttttcaagtaagtgatgactacagcatttctgatttttaaacaacctattatttc 36363266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 39694124 - 39694161
Alignment:
Q  138 ctagctttcagccaccacaaagaatgatattttacttt 175  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  39694124 ctagctttcagccaccacaaagattgatactttacttt 39694161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 234
Target Start/End: Original strand, 48129699 - 48129885
Alignment:
Q  48 tgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttca 147  Q
    |||| ||||||||||  | | |||| |||||||||||||||  |||| ||| |||||||||  || ||| |||||||||||| || |||  ||||||||     
T  48129699 tgagaaacaacaaaatagagctagcagatacccaaacacattggggggttcgaccaccacgtttgggtaccaaaaacaaaagtaaactgtttagctttcg 48129798  T
Q  148 gccaccacaaagaatgatattttactttttcaagtaattgataactagtgcattcataattattaaacaatctattatttctttcat 234  Q
    |||| || ||||||| |||||||||||||||||||| ||||||||||  |||||| | ||| |||||||||| ||||||||||||||    
T  48129799 gccatcataaagaataatattttactttttcaagtagttgataactatcgcattcctgattgttaaacaatcgattatttctttcat 48129885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 39073325 - 39073484
Alignment:
Q  18 aaaaggactactaaatgtacaat-agtcaagtgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagta 116  Q
    |||| |||||||||||||||||  | ||||| | ||||||||| ||||||| |   |||||||||||| ||| | ||||||  ||||||||  || ||||    
T  39073325 aaaaagactactaaatgtacaagcaatcaagcgtgtaacaacataacggtgctgaacgatacccaaactcatgaagggatttgaccaccacaactaagta 39073424  T
Q  117 tcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttactttt 176  Q
     |||||||||||| ||| || ||||||||||||||||||||||||| ||||| |||||||    
T  39073425 ccaaaaacaaaagtaacttgtctagctttcagccaccacaaagaataatattctactttt 39073484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 10685405 - 10685245
Alignment:
Q  75 atacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttac-t 173  Q
    ||||||||||| || ||||||||| |  |||||   || ||| | |||||||||| ||||||| | |||||||||||||||||||||| ||| || || |    
T  10685405 atacccaaacaaattaggggattcgaaaaccacatttgggtaccgaaaacaaaagtaacctgctttgctttcagccaccacaaagaataatacttaactt 10685306  T
Q  174 ttttcaagtaattgataactagtgcattcataattattaaacaatctattatttctttcat 234  Q
    ||||| ||||  ||||||||||| ||||| | ||| |||||||| ||||||||||||||||    
T  10685305 ttttctagtagctgataactagtacattcctgatttttaaacaacctattatttctttcat 10685245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 26084266 - 26084113
Alignment:
Q  79 ccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttactttttc 178  Q
    |||||||||| ||||||||||||||||||   || ||| | |||||||||| ||| ||| | |||||||||| |||  || ||| ||| || ||||||||    
T  26084266 ccaaacacattaggggattcaaccaccacatttgggtaccgaaaacaaaagtaacatgctttgctttcagcccccatgaaaaataatacttaactttttc 26084167  T
Q  179 aagtaattgataactagtgcattcataattattaaacaatctattatttctttc 232  Q
     |||| |||||||||||| ||||||| ||| |||||||| | ||||||||||||    
T  26084166 tagtagttgataactagtacattcatgatttttaaacaaccgattatttctttc 26084113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 6985559 - 6985605
Alignment:
Q  142 ctttcagccaccacaaagaatgatattttactttttcaagtaattga 188  Q
    ||||||||||||||||||||||||| |||||||| || | |||||||    
T  6985559 ctttcagccaccacaaagaatgatactttactttgtctaataattga 6985605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 31770153 - 31770117
Alignment:
Q  139 tagctttcagccaccacaaagaatgatattttacttt 175  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  31770153 tagcttttagccaccacaaagaatgaaattttacttt 31770117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 17569141 - 17568965
Alignment:
Q  48 tgagtaacaacaaaacggtgttagccgatacccaaacacataaggggattcaaccaccacggctgagtatca-------aaaacaaaagaaacctgccta 140  Q
    |||| |||||||||||  ||||||||||||||||||||||| ||||| ||| ||||||||   ||  || ||       |||| |||| |||   || ||    
T  17569141 tgagaaacaacaaaacaatgttagccgatacccaaacacattagggggttcgaccaccacatttggataccaaaaaattaaaaaaaaaaaaaatcgctta 17569042  T
Q  141 gctttcagccaccacaaagaatgatattttactttttcaagtaattgataactagtgcattcataattattaaacaa 217  Q
    ||||||| |||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| | ||| ||||||||    
T  17569041 gctttcaaccaccacaaagaataatattttactttttcaagtagctgataactattgcattcctgatttttaaacaa 17568965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 16241459 - 16241565
Alignment:
Q  69 tagccgatacccaaacacataaggggattcaaccaccacggctgagtatcaaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatatt 168  Q
    ||||| |||||||||||||||||||||||| ||||||||  | ||||  || | ||||||||||| ||  ||||||||||||||||||| |||| | | |    
T  16241459 tagccaatacccaaacacataaggggattcgaccaccacatccgagtgccagagacaaaagaaacatgtttagctttcagccaccacaaggaataagact 16241558  T
Q  169 ttacttt 175  Q
    |||||||    
T  16241559 ttacttt 16241565  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 6728263 - 6728214
Alignment:
Q  139 tagctttcagccaccacaaagaatgatattttactttttcaagtaattga 188  Q
    |||||||||||||||||||||||||||| |||||||| || | |||||||    
T  6728263 tagctttcagccaccacaaagaatgatactttactttatctaataattga 6728214  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 13415339 - 13415386
Alignment:
Q  141 gctttcagccaccacaaagaatgatattttactttttcaagtaattga 188  Q
    |||||||||||||||||||||||||| |||||||| || | |||||||    
T  13415339 gctttcagccaccacaaagaatgatactttactttgtctaataattga 13415386  T

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Target: scaffold0351 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 13499 - 13442
Alignment:
Q  118 caaaaacaaaagaaacctgcctagctttcagccaccacaaagaatgatattttacttt 175  Q
    ||||||||||| ||||||  ||||||||||||||||||||||| ||||| ||||||||    
T  13499 caaaaacaaaaaaaaccttactagctttcagccaccacaaagactgatactttacttt 13442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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