View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13994_low_4 (Length: 347)
Name: NF13994_low_4
Description: NF13994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13994_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 74 - 329
Target Start/End: Complemental strand, 17328278 - 17328023
Alignment:
| Q |
74 |
tgggagtgattaaatcagccataggagatgcaattctaacatcaatatttgttttcttcatctcaacattaagaattctctctacaaaaacatctctatt |
173 |
Q |
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| T |
17328278 |
tgggagtgattaaatcagccataggagatgcaattctaacatcaatatttgttttcttcatctcaacattaagaattctctctacaaaaacatctctttt |
17328179 |
T |
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| Q |
174 |
tctcaaccttcaaccactttcactaccaggcctattcatcacaaccatcctaaacacaataatcatcctcacaataagccttattggaagaatcttaggt |
273 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17328178 |
tctcaaccttcaaccactttcactaccaggcttattcatcacaaccatcctaaacacaataatcatcctcacaataagccttattggaagaatcttaggt |
17328079 |
T |
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| Q |
274 |
ggtgctagtttcaacccttcatccacaatttccttctatacattaggactaagacc |
329 |
Q |
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| T |
17328078 |
ggtgctagttttaacccttcatccacaatttccttctacacattaggactaagacc |
17328023 |
T |
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