View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13995_high_27 (Length: 271)
Name: NF13995_high_27
Description: NF13995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13995_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 35146248 - 35146491
Alignment:
| Q |
18 |
gttacatgccattgccactcctttagggcaacatgaccaatgactcttccccacttttgcttcatgtgaatttcccaaaaatgatcacttctacatttat |
117 |
Q |
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| T |
35146248 |
gttacatgccattgccactcctttagggcaacatgaccaatgactcttccccacttttgcttcatgtgaatttcccaaaaatgatcacttctacatttat |
35146347 |
T |
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| Q |
118 |
ttcttagacaaatgcatacttcagacattttgatgagttctattggtgaaagacgttcgagaattccatctaaaatggattcgggaaaattcaaaagaga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35146348 |
ttcttagacaaatgcatacttcagacattttgatgagttctattggtgaaagacgttcgagaattccatctaaaatggattcgggaaaattcaaaagaga |
35146447 |
T |
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| Q |
218 |
gatgctaacactatttgcaattttcttcattctagtttcctttg |
261 |
Q |
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| T |
35146448 |
gatgctaacactatttgcaattttcttcattctagtttcctttg |
35146491 |
T |
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