View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13995_low_35 (Length: 218)

Name: NF13995_low_35
Description: NF13995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13995_low_35
NF13995_low_35
[»] chr8 (9 HSPs)
chr8 (21-103)||(29168248-29168330)
chr8 (21-99)||(3117990-3118068)
chr8 (21-98)||(1548424-1548501)
chr8 (21-102)||(23033662-23033743)
chr8 (21-78)||(20901053-20901110)
chr8 (22-99)||(34784243-34784320)
chr8 (21-101)||(3376072-3376152)
chr8 (39-102)||(3277750-3277813)
chr8 (19-72)||(8481318-8481371)
[»] chr1 (2 HSPs)
chr1 (21-99)||(47523954-47524032)
chr1 (21-54)||(43866475-43866508)
[»] chr3 (5 HSPs)
chr3 (19-101)||(53208428-53208510)
chr3 (21-102)||(7323123-7323204)
chr3 (21-98)||(32130443-32130520)
chr3 (21-100)||(9454903-9454982)
chr3 (21-100)||(7227359-7227438)
[»] chr2 (6 HSPs)
chr2 (22-100)||(33391758-33391836)
chr2 (22-104)||(36536121-36536203)
chr2 (21-102)||(25438576-25438657)
chr2 (21-102)||(37154587-37154668)
chr2 (21-99)||(44673448-44673526)
chr2 (25-92)||(41714894-41714961)
[»] chr4 (6 HSPs)
chr4 (21-98)||(5650486-5650563)
chr4 (21-102)||(16497451-16497532)
chr4 (21-98)||(2588236-2588313)
chr4 (19-100)||(49577305-49577386)
chr4 (21-101)||(39598851-39598931)
chr4 (21-100)||(4289822-4289901)
[»] chr6 (4 HSPs)
chr6 (21-100)||(13425442-13425521)
chr6 (31-104)||(25100775-25100848)
chr6 (21-59)||(23889827-23889865)
chr6 (19-59)||(18133687-18133727)
[»] chr7 (6 HSPs)
chr7 (21-100)||(32775451-32775530)
chr7 (21-100)||(36167472-36167551)
chr7 (21-73)||(19886852-19886904)
chr7 (19-59)||(46082249-46082289)
chr7 (21-100)||(12858969-12859048)
chr7 (21-58)||(5465479-5465516)
[»] chr5 (2 HSPs)
chr5 (21-100)||(7992131-7992210)
chr5 (21-103)||(28276991-28277073)
[»] scaffold0302 (1 HSPs)
scaffold0302 (21-100)||(17371-17450)
[»] scaffold0325 (1 HSPs)
scaffold0325 (22-100)||(8627-8706)


Alignment Details
Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 29168330 - 29168248
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggtt 103  Q
    ||||||||||||||||||  ||||||||||||||||||| || ||| ||||||||||| ||| | ||||||||||||||||||    
T  29168330 gaaccgtgttacgttcctcatgtttacgttctttcaccggccgaccgatcctatgtaggatctctatcctgactacattggtt 29168248  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 3117990 - 3118068
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacatt 99  Q
    ||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||| | | || |||||||||||||    
T  3117990 gaaccatgttacgttcctcgtgtttacgttctttcaccggccgaccaatcctatgtaggaactcgttcctgactacatt 3118068  T

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Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 1548424 - 1548501
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacat 98  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || ||||||||||||    
T  1548424 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacat 1548501  T

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Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 23033662 - 23033743
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggt 102  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| | |||| |||| | | || ||||||||||||||||    
T  23033662 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgaacctacgtaggaactcgttcctgactacattggt 23033743  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 20901053 - 20901110
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtag 78  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| ||||    
T  20901053 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtag 20901110  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 34784320 - 34784243
Alignment:
Q  22 aaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacatt 99  Q
    ||||||||||||||||| ||||||| |||||||||||| || ||| |||||| |||| | | || |||||||||||||    
T  34784320 aaccgtgttacgttcctcgtgtttatgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacatt 34784243  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 3376152 - 3376072
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattgg 101  Q
    |||||||||||||||||| ||||||||||||||||| || |  ||| | |||| |||| |||  |||||||||||||||||    
T  3376152 gaaccgtgttacgttcctcgtgtttacgttctttcatcggcggaccgaacctacgtaggatcttgatcctgactacattgg 3376072  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 3277750 - 3277813
Alignment:
Q  39 tgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggt 102  Q
    ||||||||||||||||||||| || ||| |||||| |||| | | || ||||||||||||||||    
T  3277750 tgtgtttacgttctttcaccggccgaccgatcctaagtaggaactcgttcctgactacattggt 3277813  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 8481318 - 8481371
Alignment:
Q  19 atgaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcct 72  Q
    ||||||||| ||||| |||| ||||||||| |||||||||  ||||||||||||    
T  8481318 atgaaccgtcttacgatcctcgtgtttacgatctttcacctgcctaccaatcct 8481371  T

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Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 47523954 - 47524032
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacatt 99  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| ||||||  ||| ||| ||||||||||||||||    
T  47523954 gaaccgtgttacgttccttgtgtttacgttctttcaccggccgaccgatcctacataggatctcgatcctgactacatt 47524032  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 43866475 - 43866508
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttcttt 54  Q
    |||||||||||||||||| |||||||||||||||    
T  43866475 gaaccgtgttacgttcctcgtgtttacgttcttt 43866508  T

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Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 53208510 - 53208428
Alignment:
Q  19 atgaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattgg 101  Q
    |||||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || |||||||||||||||    
T  53208510 atgaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacattgg 53208428  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 7323123 - 7323204
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggt 102  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | |  | ||||||||||||||||    
T  7323123 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaacttgttcctgactacattggt 7323204  T

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Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 32130443 - 32130520
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacat 98  Q
    |||||||||||||||||| ||||||||||||||||| || || ||| |||||| |||| | | || ||||||||||||    
T  32130443 gaaccgtgttacgttcctcgtgtttacgttctttcatcggccgaccgatcctacgtaggaactcgttcctgactacat 32130520  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 9454903 - 9454982
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    ||||||||||||  |||| ||| ||||||| |||||||| || ||| |||||| |||| ||| |||||||||||||||||    
T  9454903 gaaccgtgttacactcctcgtggttacgttttttcaccggccgaccgatcctacgtaggatcacgatcctgactacattg 9454982  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 7227359 - 7227438
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||| ||| ||||| ||||||||||||||||||||  | ||  ||||||  ||| ||| |||||||||||||||||    
T  7227359 gaaccgtggtacattcctcgtgtttacgttctttcaccggacgactgatcctacataggatctcgatcctgactacattg 7227438  T

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Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 33391836 - 33391758
Alignment:
Q  22 aaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    ||||||||||||||||| ||||||||||||  |||||| || ||||||||||||||| |||  ||||||||||||||||    
T  33391836 aaccgtgttacgttcctcgtgtttacgttccatcaccggccgaccaatcctatgtaggatcttgatcctgactacattg 33391758  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 36536203 - 36536121
Alignment:
Q  22 aaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggtta 104  Q
    ||||||||||||| |||||||||||| ||||||||| | || |||||||||| |||| ||| |||| ||||||||||||||||    
T  36536203 aaccgtgttacgtgccttgtgtttactttctttcactggccgaccaatcctacgtaggatctcgattctgactacattggtta 36536121  T

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Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 25438576 - 25438657
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggt 102  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || ||||||||||||||||    
T  25438576 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacattggt 25438657  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 37154668 - 37154587
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggt 102  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||| || ||| |||| ||| ||||| |||||||||||||    
T  37154668 gaaccgtgttacgttcctcgtgtttacgttctttcaccaaccaaccgattctacgtaggatctcgatcttgactacattggt 37154587  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 44673448 - 44673526
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacatt 99  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || |||||||||||||    
T  44673448 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacatt 44673526  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 41714961 - 41714894
Alignment:
Q  25 cgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctga 92  Q
    ||||||| ||||||||||||||||||||||| |||| | ||||||| || |||| ||| |||||||||    
T  41714961 cgtgttatgttccttgtgtttacgttctttcgccgaacaaccaatcatacgtaggatctcgatcctga 41714894  T

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Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 5650563 - 5650486
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacat 98  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||| | | || ||||||||||||    
T  5650563 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctatgtaggaactcgttcctgactacat 5650486  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 16497532 - 16497451
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggt 102  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || ||||||||||||||||    
T  16497532 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacattggt 16497451  T

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Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 2588313 - 2588236
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacat 98  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || ||||||||||||    
T  2588313 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacat 2588236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 49577386 - 49577305
Alignment:
Q  19 atgaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||| ||||||||||||| |||||||| ||||||||||| || ||| |||||| |||| ||| ||||| |||||||||||    
T  49577386 atgaactgtgttacgttcctcgtgtttacattctttcaccggccgaccgatcctacgtaggatctcgatcatgactacattg 49577305  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 39598931 - 39598851
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattgg 101  Q
    |||| ||| ||||||||| |||||||||||||||||| | || ||| ||||||  ||| ||| ||||||||||||||||||    
T  39598931 gaacagtgctacgttcctcgtgtttacgttctttcactgcccgaccgatcctacataggatctcgatcctgactacattgg 39598851  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 4289901 - 4289822
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||| ||||||||||| ||||||| ||||||||| || || ||| |||||| |||| ||| |||| ||||||||||||    
T  4289901 gaaccgggttacgttcctcgtgtttaagttctttcaacggccaaccgatcctacgtaggatctcgatactgactacattg 4289822  T

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Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 13425521 - 13425442
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || ||||||||||||||    
T  13425521 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcctgactacattg 13425442  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 25100848 - 25100775
Alignment:
Q  31 acgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggtta 104  Q
    |||||||| || |||| |||| ||||||| || ||||||||||||||| |||  |||||| |||||||||||||    
T  25100848 acgttcctcgtttttatgttccttcaccggccgaccaatcctatgtaggatcttgatcctaactacattggtta 25100775  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 23889865 - 23889827
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccg 59  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  23889865 gaaccgtgttacgttcctcgtgttttcgttctttcaccg 23889827  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 18133727 - 18133687
Alignment:
Q  19 atgaaccgtgttacgttccttgtgtttacgttctttcaccg 59  Q
    |||||||||||||||||||| |||||| ||||| |||||||    
T  18133727 atgaaccgtgttacgttcctcgtgttttcgttcattcaccg 18133687  T

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Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 32775451 - 32775530
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| | || | | || ||||||||||||||    
T  32775451 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgcaggaactcgttcctgactacattg 32775530  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 36167551 - 36167472
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||||||||||||| |||||||| ||||||||||| || ||| |||||| |||| | | || ||||||||||||||    
T  36167551 gaaccgtgttacgttcctcgtgtttacattctttcaccggccaaccgatcctacgtaggaactcgttcctgactacattg 36167472  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 19886852 - 19886904
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatccta 73  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| ||||||    
T  19886852 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatccta 19886904  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 46082289 - 46082249
Alignment:
Q  19 atgaaccgtgttacgttccttgtgtttacgttctttcaccg 59  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  46082289 atgaaccgtgttacgttccttgtgtttacgttccttcaccg 46082249  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 12859048 - 12858969
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    ||||||||||||||||||  ||||||||||||||||||| || ||| || ||| |||| | | || ||||||||||||||    
T  12859048 gaaccgtgttacgttcctcatgtttacgttctttcaccggccgaccgatgctacgtaggaactcgttcctgactacattg 12858969  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 5465516 - 5465479
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcacc 58  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5465516 gaaccatgttacgttccttgtgtttacgttctttcacc 5465479  T

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Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 7992210 - 7992131
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||||||||||||| |||||||||||||||||||| || ||| |||||| |||| | | || || |||||||||||    
T  7992210 gaaccgtgttacgttcctcgtgtttacgttctttcaccggccgaccgatcctacgtaggaactcgttcatgactacattg 7992131  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 28276991 - 28277073
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattggtt 103  Q
    |||| ||||||||||||| || ||||||||||||||||| || | | |||||| |||| ||| | ||||||||||||| ||||    
T  28276991 gaactgtgttacgttcctcgtatttacgttctttcaccggccaatcgatcctacgtaggatctcaatcctgactacatcggtt 28277073  T

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Target: scaffold0302 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 17371 - 17450
Alignment:
Q  21 gaaccgtgttacgttccttgtgtttacgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||||||||||||| |||||||||||||||||||  ||  |  |||||| |||| ||| ||||||||| |||||||    
T  17371 gaaccgtgttacgttcctcgtgtttacgttctttcacctgccggcagatcctacgtaggatctcgatcctgattacattg 17450  T

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Target: scaffold0325 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 8627 - 8706
Alignment:
Q  22 aaccgtgttacgttccttgtgttt-acgttctttcaccgacctaccaatcctatgtagaatcccgatcctgactacattg 100  Q
    |||||||| |||||||| |||||| |||||| ||||||| || ||| |||||| |||| ||| | |||||||||||||||    
T  8627 aaccgtgtcacgttcctcgtgttttacgttcgttcaccggccgaccgatcctacgtaggatctccatcctgactacattg 8706  T

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