View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13995_low_4 (Length: 625)

Name: NF13995_low_4
Description: NF13995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13995_low_4
NF13995_low_4
[»] chr8 (49 HSPs)
chr8 (17-237)||(8410794-8411015)
chr8 (244-416)||(11287779-11287951)
chr8 (241-417)||(12353286-12353460)
chr8 (241-417)||(10007687-10007864)
chr8 (273-417)||(18978051-18978195)
chr8 (241-417)||(12351921-12352097)
chr8 (242-417)||(18979046-18979220)
chr8 (245-420)||(45112875-45113043)
chr8 (240-417)||(10006343-10006521)
chr8 (241-417)||(24122883-24123058)
chr8 (241-417)||(30335639-30335816)
chr8 (240-408)||(22220387-22220556)
chr8 (244-381)||(29968298-29968434)
chr8 (273-417)||(18970942-18971085)
chr8 (241-408)||(22221297-22221465)
chr8 (241-408)||(22227639-22227807)
chr8 (241-412)||(42982584-42982758)
chr8 (273-417)||(24123827-24123967)
chr8 (268-417)||(18488187-18488336)
chr8 (241-420)||(45114438-45114617)
chr8 (246-408)||(1824011-1824174)
chr8 (246-408)||(1858456-1858619)
chr8 (244-371)||(11282011-11282138)
chr8 (241-371)||(5513982-5514111)
chr8 (241-371)||(11283180-11283310)
chr8 (312-417)||(30570181-30570286)
chr8 (525-617)||(39889321-39889410)
chr8 (538-617)||(28977933-28978009)
chr8 (243-402)||(43661267-43661427)
chr8 (241-349)||(1823552-1823660)
chr8 (241-349)||(1857997-1858105)
chr8 (241-372)||(8388464-8388593)
chr8 (305-417)||(30568950-30569062)
chr8 (239-407)||(36249550-36249718)
chr8 (241-415)||(30336427-30336602)
chr8 (241-417)||(43661747-43661924)
chr8 (244-372)||(8389659-8389787)
chr8 (362-417)||(17844395-17844450)
chr8 (243-379)||(29043400-29043536)
chr8 (240-298)||(24483142-24483200)
chr8 (241-318)||(5514294-5514370)
chr8 (273-358)||(32207309-32207394)
chr8 (241-371)||(32968456-32968586)
chr8 (273-358)||(24488664-24488748)
chr8 (240-292)||(3819488-3819539)
chr8 (365-409)||(11288831-11288875)
chr8 (241-297)||(11456638-11456694)
chr8 (240-324)||(38974794-38974878)
chr8 (240-324)||(39005892-39005976)
[»] scaffold0302 (3 HSPs)
scaffold0302 (241-420)||(17470-17649)
scaffold0302 (527-617)||(17758-17848)
scaffold0302 (239-417)||(18701-18879)
[»] chr2 (44 HSPs)
chr2 (241-417)||(36449778-36449954)
chr2 (244-415)||(7898694-7898865)
chr2 (244-417)||(36450846-36451018)
chr2 (241-417)||(38840418-38840594)
chr2 (241-417)||(38839242-38839418)
chr2 (241-410)||(7899814-7899983)
chr2 (241-417)||(41879137-41879313)
chr2 (241-417)||(13570482-13570658)
chr2 (241-417)||(22587879-22588054)
chr2 (240-417)||(41878091-41878264)
chr2 (241-405)||(11257622-11257786)
chr2 (241-417)||(22848191-22848368)
chr2 (240-372)||(18299372-18299504)
chr2 (305-417)||(22587564-22587676)
chr2 (241-371)||(11938760-11938889)
chr2 (241-417)||(11258735-11258912)
chr2 (241-358)||(23869519-23869635)
chr2 (244-417)||(8534586-8534758)
chr2 (244-417)||(26544152-26544325)
chr2 (241-417)||(16446154-16446330)
chr2 (241-408)||(18797246-18797415)
chr2 (241-358)||(18904367-18904484)
chr2 (241-417)||(802516-802691)
chr2 (273-417)||(810706-810850)
chr2 (241-417)||(18905912-18906088)
chr2 (244-346)||(8535652-8535752)
chr2 (540-617)||(8972574-8972648)
chr2 (273-417)||(13568004-13568148)
chr2 (258-372)||(24475241-24475355)
chr2 (244-417)||(28617926-28618098)
chr2 (241-318)||(18868924-18869001)
chr2 (242-408)||(13030293-13030457)
chr2 (241-324)||(32739623-32739706)
chr2 (540-612)||(35780107-35780176)
chr2 (273-417)||(26545445-26545590)
chr2 (540-610)||(20440113-20440180)
chr2 (540-610)||(20445718-20445785)
chr2 (319-406)||(27553701-27553788)
chr2 (305-417)||(32739715-32739827)
chr2 (241-336)||(1034475-1034570)
chr2 (281-417)||(18869086-18869224)
chr2 (269-323)||(24476863-24476917)
chr2 (275-323)||(18300743-18300791)
chr2 (241-297)||(26829333-26829389)
[»] chr3 (64 HSPs)
chr3 (241-417)||(54540715-54540891)
chr3 (244-415)||(7268754-7268924)
chr3 (241-417)||(22776737-22776913)
chr3 (244-415)||(7267647-7267817)
chr3 (241-417)||(55191920-55192095)
chr3 (241-417)||(19984849-19985025)
chr3 (241-417)||(54539755-54539931)
chr3 (241-417)||(19985995-19986173)
chr3 (311-417)||(22775816-22775922)
chr3 (242-405)||(8456479-8456642)
chr3 (265-417)||(34940112-34940264)
chr3 (241-408)||(51038723-51038891)
chr3 (241-407)||(7758402-7758569)
chr3 (241-417)||(29931226-29931403)
chr3 (241-417)||(29980380-29980557)
chr3 (240-417)||(49216246-49216423)
chr3 (241-417)||(53614819-53614995)
chr3 (305-417)||(10457604-10457716)
chr3 (239-370)||(46719939-46720070)
chr3 (240-417)||(47614184-47614362)
chr3 (244-413)||(49398130-49398298)
chr3 (240-408)||(51037535-51037703)
chr3 (240-372)||(51469971-51470103)
chr3 (241-417)||(12700175-12700350)
chr3 (264-417)||(4271463-4271616)
chr3 (274-415)||(55191544-55191684)
chr3 (273-417)||(31645005-31645149)
chr3 (240-373)||(52840573-52840706)
chr3 (244-372)||(47610550-47610678)
chr3 (540-617)||(18009857-18009931)
chr3 (245-343)||(24516464-24516562)
chr3 (244-410)||(39843054-39843220)
chr3 (311-408)||(47615510-47615608)
chr3 (241-346)||(29932695-29932799)
chr3 (241-346)||(29981849-29981953)
chr3 (241-404)||(47609697-47609861)
chr3 (361-417)||(49220477-49220533)
chr3 (241-417)||(52839037-52839213)
chr3 (241-417)||(12703424-12703600)
chr3 (244-402)||(23770346-23770505)
chr3 (241-405)||(8875906-8876071)
chr3 (263-406)||(11670406-11670550)
chr3 (129-177)||(19543733-19543781)
chr3 (273-336)||(534531-534594)
chr3 (244-417)||(34019069-34019241)
chr3 (241-372)||(46721190-46721321)
chr3 (241-343)||(5029682-5029783)
chr3 (241-299)||(47615591-47615649)
chr3 (244-346)||(53616012-53616114)
chr3 (244-408)||(51347271-51347436)
chr3 (315-406)||(10583976-10584067)
chr3 (310-417)||(26722601-26722708)
chr3 (333-417)||(49401413-49401497)
chr3 (241-370)||(11671313-11671441)
chr3 (244-417)||(54986931-54987103)
chr3 (312-370)||(53897173-53897231)
chr3 (240-337)||(535787-535884)
chr3 (241-301)||(5001200-5001260)
chr3 (362-417)||(6171168-6171223)
chr3 (241-324)||(28263129-28263212)
chr3 (331-417)||(32829829-32829915)
chr3 (241-372)||(51470425-51470555)
chr3 (314-417)||(26723786-26723889)
chr3 (240-339)||(53901391-53901488)
[»] chr5 (43 HSPs)
chr5 (241-417)||(40255597-40255773)
chr5 (241-417)||(28538676-28538852)
chr5 (241-417)||(36486413-36486589)
chr5 (244-417)||(28539745-28539917)
chr5 (241-417)||(33160212-33160387)
chr5 (243-417)||(36485302-36485476)
chr5 (241-417)||(18486826-18487003)
chr5 (244-417)||(24332916-24333089)
chr5 (241-417)||(25523069-25523246)
chr5 (241-417)||(16650779-16650956)
chr5 (241-417)||(1797222-1797397)
chr5 (244-417)||(20216687-20216861)
chr5 (241-417)||(19752912-19753088)
chr5 (240-412)||(22940552-22940724)
chr5 (249-417)||(1015492-1015660)
chr5 (240-417)||(20214195-20214372)
chr5 (240-417)||(1796053-1796231)
chr5 (241-417)||(19754054-19754232)
chr5 (244-417)||(1016789-1016961)
chr5 (241-408)||(25055412-25055580)
chr5 (241-417)||(18485138-18485322)
chr5 (244-408)||(42195137-42195300)
chr5 (282-417)||(25524022-25524158)
chr5 (241-372)||(5778806-5778937)
chr5 (237-336)||(25056387-25056486)
chr5 (311-417)||(5961476-5961582)
chr5 (294-415)||(16650045-16650167)
chr5 (241-321)||(25524148-25524229)
chr5 (326-417)||(14061537-14061628)
chr5 (269-371)||(2686372-2686474)
chr5 (32-175)||(20424808-20424952)
chr5 (273-372)||(5730832-5730931)
chr5 (273-336)||(7311622-7311685)
chr5 (241-358)||(5777901-5778016)
chr5 (284-358)||(21835083-21835157)
chr5 (241-323)||(33158098-33158180)
chr5 (241-301)||(5730441-5730502)
chr5 (564-617)||(32234222-32234275)
chr5 (328-419)||(24468509-24468601)
chr5 (241-408)||(42196133-42196301)
chr5 (92-175)||(12402285-12402368)
chr5 (240-299)||(41663768-41663827)
chr5 (244-372)||(2186774-2186901)
[»] chr6 (31 HSPs)
chr6 (241-417)||(10784592-10784770)
chr6 (246-417)||(29473082-29473253)
chr6 (241-415)||(14822360-14822534)
chr6 (244-417)||(1829528-1829701)
chr6 (241-417)||(16704422-16704598)
chr6 (241-415)||(14823502-14823677)
chr6 (273-417)||(26574979-26575123)
chr6 (241-417)||(7316218-7316395)
chr6 (269-417)||(10785838-10785986)
chr6 (240-417)||(7314879-7315056)
chr6 (241-372)||(8659265-8659396)
chr6 (241-372)||(27437828-27437959)
chr6 (244-372)||(34834549-34834677)
chr6 (241-388)||(26574619-26574765)
chr6 (244-372)||(5658759-5658887)
chr6 (241-372)||(8660174-8660304)
chr6 (242-408)||(12382644-12382811)
chr6 (241-358)||(8821873-8821990)
chr6 (241-372)||(3721612-3721743)
chr6 (240-358)||(8822777-8822895)
chr6 (260-417)||(26949110-26949264)
chr6 (241-343)||(27322067-27322168)
chr6 (241-291)||(1828739-1828789)
chr6 (240-417)||(16703569-16703734)
chr6 (241-371)||(17496793-17496928)
chr6 (311-408)||(26717046-26717144)
chr6 (273-358)||(3333010-3333095)
chr6 (275-342)||(12350832-12350898)
chr6 (241-292)||(27447963-27448014)
chr6 (374-415)||(13345682-13345723)
chr6 (241-317)||(6842308-6842384)
[»] chr4 (51 HSPs)
chr4 (241-417)||(31599789-31599965)
chr4 (240-417)||(31600910-31601087)
chr4 (244-417)||(35935458-35935631)
chr4 (241-417)||(52491534-52491708)
chr4 (244-417)||(8758766-8758935)
chr4 (241-417)||(10448185-10448361)
chr4 (241-408)||(1290131-1290299)
chr4 (241-373)||(1963196-1963328)
chr4 (244-417)||(35934347-35934518)
chr4 (241-417)||(17388135-17388311)
chr4 (241-390)||(8757675-8757822)
chr4 (241-416)||(10447006-10447182)
chr4 (240-417)||(50909597-50909775)
chr4 (241-417)||(17382993-17383169)
chr4 (241-408)||(1835035-1835203)
chr4 (244-417)||(12129626-12129800)
chr4 (254-344)||(21539069-21539159)
chr4 (240-408)||(1964374-1964543)
chr4 (243-372)||(19750545-19750673)
chr4 (243-372)||(19789133-19789261)
chr4 (240-372)||(10471358-10471490)
chr4 (240-408)||(1834118-1834288)
chr4 (305-417)||(21178060-21178172)
chr4 (236-372)||(25684929-25685065)
chr4 (241-416)||(13509284-13509459)
chr4 (241-372)||(5526096-5526226)
chr4 (241-372)||(10470546-10470677)
chr4 (241-372)||(25685792-25685923)
chr4 (362-417)||(46637804-46637859)
chr4 (241-358)||(48780248-48780365)
chr4 (241-372)||(5525360-5525490)
chr4 (241-403)||(26421561-26421722)
chr4 (244-372)||(37728535-37728662)
chr4 (244-412)||(1289100-1289269)
chr4 (540-617)||(44890878-44890952)
chr4 (330-417)||(54107948-54108035)
chr4 (241-323)||(49308046-49308127)
chr4 (241-372)||(13386502-13386634)
chr4 (312-417)||(8896835-8896940)
chr4 (567-617)||(43242654-43242704)
chr4 (241-372)||(13386014-13386147)
chr4 (244-417)||(8155741-8155914)
chr4 (244-324)||(33296227-33296306)
chr4 (244-417)||(55603456-55603628)
chr4 (241-317)||(50909273-50909348)
chr4 (321-372)||(2193425-2193476)
chr4 (241-344)||(3928856-3928959)
chr4 (249-371)||(46638696-46638817)
chr4 (238-292)||(51291421-51291475)
chr4 (241-289)||(20919584-20919632)
chr4 (365-417)||(50909386-50909438)
[»] chr1 (58 HSPs)
chr1 (240-415)||(39699694-39699868)
chr1 (240-417)||(36613828-36614006)
chr1 (244-417)||(39153041-39153214)
chr1 (240-417)||(45148580-45148756)
chr1 (244-417)||(45149895-45150068)
chr1 (241-405)||(24422800-24422965)
chr1 (244-417)||(39151934-39152107)
chr1 (241-408)||(11436042-11436210)
chr1 (241-413)||(39698563-39698734)
chr1 (276-417)||(44411891-44412032)
chr1 (239-372)||(51684364-51684497)
chr1 (225-405)||(52274952-52275133)
chr1 (241-412)||(11437128-11437300)
chr1 (273-417)||(44404474-44404618)
chr1 (241-417)||(14999285-14999457)
chr1 (244-417)||(50680335-50680508)
chr1 (241-417)||(14999876-15000056)
chr1 (244-417)||(37526802-37526975)
chr1 (20-175)||(20424927-20425083)
chr1 (241-388)||(45157163-45157309)
chr1 (235-372)||(24426045-24426182)
chr1 (241-408)||(35594217-35594383)
chr1 (241-371)||(35066973-35067103)
chr1 (244-417)||(43378637-43378810)
chr1 (241-417)||(36612853-36613029)
chr1 (273-417)||(52276087-52276232)
chr1 (240-372)||(41364828-41364959)
chr1 (241-404)||(52827347-52827511)
chr1 (244-372)||(52828040-52828168)
chr1 (240-417)||(39222397-39222576)
chr1 (241-408)||(35595125-35595294)
chr1 (273-371)||(43058817-43058915)
chr1 (241-350)||(23980458-23980567)
chr1 (244-372)||(7983053-7983180)
chr1 (315-412)||(46525730-46525827)
chr1 (255-344)||(7675457-7675546)
chr1 (241-417)||(12389906-12390082)
chr1 (321-417)||(16281227-16281321)
chr1 (241-417)||(16290093-16290270)
chr1 (240-370)||(50681580-50681706)
chr1 (241-358)||(51685749-51685866)
chr1 (263-417)||(43377742-43377897)
chr1 (264-390)||(40384748-40384874)
chr1 (244-385)||(45156052-45156193)
chr1 (241-297)||(21185208-21185264)
chr1 (273-417)||(33088099-33088243)
chr1 (241-372)||(41366101-41366231)
chr1 (310-417)||(14512547-14512654)
chr1 (315-408)||(46524613-46524706)
chr1 (241-318)||(7674528-7674603)
chr1 (320-373)||(17505040-17505093)
chr1 (273-350)||(33088609-33088686)
chr1 (331-417)||(39221404-39221491)
chr1 (362-408)||(46312185-46312232)
chr1 (241-290)||(11190385-11190434)
chr1 (241-297)||(21945708-21945763)
chr1 (354-417)||(21946523-21946587)
chr1 (273-404)||(43059943-43060075)
[»] scaffold2034 (2 HSPs)
scaffold2034 (239-417)||(231-409)
scaffold2034 (262-417)||(903-1058)
[»] chr7 (34 HSPs)
chr7 (241-417)||(22629483-22629663)
chr7 (241-417)||(7500455-7500631)
chr7 (269-417)||(14999080-14999228)
chr7 (241-417)||(7501776-7501953)
chr7 (241-417)||(11658379-11658556)
chr7 (240-405)||(31659621-31659788)
chr7 (240-408)||(18371423-18371592)
chr7 (241-417)||(769413-769589)
chr7 (244-378)||(11662515-11662649)
chr7 (265-417)||(18372381-18372534)
chr7 (241-417)||(34352711-34352887)
chr7 (244-404)||(42886224-42886384)
chr7 (241-372)||(31949322-31949453)
chr7 (273-417)||(34351524-34351664)
chr7 (241-372)||(3227564-3227695)
chr7 (240-372)||(47525337-47525469)
chr7 (309-407)||(14998048-14998145)
chr7 (240-346)||(48934899-48935005)
chr7 (538-617)||(33131956-33132032)
chr7 (241-372)||(31949772-31949903)
chr7 (242-372)||(3227109-3227238)
chr7 (243-404)||(17781663-17781825)
chr7 (241-371)||(22630423-22630553)
chr7 (241-417)||(47369781-47369958)
chr7 (312-410)||(770693-770791)
chr7 (241-372)||(127337-127466)
chr7 (269-407)||(6618235-6618374)
chr7 (243-417)||(46482599-46482774)
chr7 (244-372)||(128571-128699)
chr7 (241-337)||(17782558-17782654)
chr7 (311-417)||(32253352-32253458)
chr7 (236-320)||(43899443-43899525)
chr7 (241-358)||(21505416-21505531)
chr7 (241-313)||(20163585-20163657)
[»] scaffold0320 (1 HSPs)
scaffold0320 (241-417)||(19488-19665)
[»] scaffold0059 (2 HSPs)
scaffold0059 (260-417)||(3694-3851)
scaffold0059 (242-417)||(4655-4829)
[»] scaffold0632 (1 HSPs)
scaffold0632 (241-417)||(3233-3408)
[»] scaffold0019 (2 HSPs)
scaffold0019 (242-372)||(61429-61559)
scaffold0019 (240-372)||(60089-60221)
[»] scaffold0294 (1 HSPs)
scaffold0294 (241-372)||(5408-5539)
[»] scaffold0045 (1 HSPs)
scaffold0045 (240-317)||(49109-49186)
[»] scaffold1303 (1 HSPs)
scaffold1303 (241-408)||(1439-1607)
[»] scaffold0003 (2 HSPs)
scaffold0003 (241-372)||(49403-49534)
scaffold0003 (241-292)||(39344-39395)
[»] scaffold0321 (1 HSPs)
scaffold0321 (243-408)||(18730-18896)
[»] scaffold0049 (1 HSPs)
scaffold0049 (241-358)||(7399-7516)
[»] scaffold0112 (1 HSPs)
scaffold0112 (240-372)||(37147-37278)
[»] scaffold0586 (2 HSPs)
scaffold0586 (244-417)||(6346-6509)
scaffold0586 (241-371)||(8998-9126)
[»] scaffold0186 (1 HSPs)
scaffold0186 (240-417)||(23080-23255)
[»] scaffold0093 (2 HSPs)
scaffold0093 (242-372)||(2435-2564)
scaffold0093 (242-372)||(7058-7187)
[»] scaffold0227 (1 HSPs)
scaffold0227 (240-324)||(137-221)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 1e-95; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 8411015 - 8410794
Alignment:
Q  17 aggaacaaagagaaaaccaacaaagtagtaaatttcttgatatgcacattgttggtccctggagtgtcc-cgtagcatacttggactatattcaagaacc 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||| ||||||||||||||||||||    
T  8411015 aggaacaaagagaaatccaacaaagtagtaaatttcttgatatgcacattgttggtccctgaagtgtcgtcgtaacatatttggactatattcaagaacc 8410916  T
Q  116 accatcttggtgtggtttgggttcctctattgtcgaggtttccaaagaggttttaaatcccaccaaagtggtttgatataattttgacacgtggttgatt 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  8410915 accatcttggtgtggtttgggttcctctaatgtcgaggtttccaaagaggttttaaatcccactaaagtggtttcatataattttgacacgtgattgatt 8410816  T
Q  216 ttaatgatgataataatacaaa 237  Q
    ||||||||||||||||||||||    
T  8410815 ttaatgatgataataatacaaa 8410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 244 - 416
Target Start/End: Original strand, 11287779 - 11287951
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||| | ||| ||| ||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||| | |||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatta 416  Q
    |||||||||| |||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||||    
T  11287879 aattttgatcatttttatcaattttgaccggtcaacgcctatgcggcatgccacatgtgtaattattgaatta 11287951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 12353460 - 12353286
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||| |||||||| | |||||| ||||||||||||| |||| |||||||| |    
T  12353460 ggctaaagtgcacttttcc-cccttaactttcaaaaacttgcaattttggccccctaagtaca-aaactataattttggccccctaagatttagccccat 12353363  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| || |||||  ||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||    
T  12353362 tgcaattttaattcttttggtcaattttgaccggtcaatgcttacatggcgtgccacgtgtgtaattatttaattaa 12353286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 10007864 - 10007687
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  10007864 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccctt 10007765  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  10007764 tgcatctttggtccttttcgtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 10007687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 18978051 - 18978195
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||| ||| ||||||||||| |||||||| | |||||||||||||||||||  |||| ||||||||||||||| |||||||||||||  ||||||||||     
T  18978051 aaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttgatccttttttccaattttgacg 18978150  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||    
T  18978151 ggtcaatgcctacgtggcacgccacgtgtctaattattaaattaa 18978195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 12351921 - 12352097
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||||||| || ||||||| ||| ||||| ||||||||||| || |||||||| | |||||||||||||| ||||| |||| |||||| | |    
T  12351921 ggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcctcat 12352020  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| | ||||||   |||||||||||||||||||| || ||||| || |||||||||||||||| ||||||    
T  12352021 tgcaattttaacccttttggacaattttgaccggtcaatgcatatgtggcgtgtcacgtgtgtaattatttaattaa 12352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 18979220 - 18979046
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||||| ||| ||| ||| || ||||||||||||||||| ||||| |||| |||||||||||||||||||  | || ||||||| |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  342 gcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||| |||||||||||||  |||||||||| ||||||||||||| || | ||||| ||||||||||||| ||||||    
T  18979120 gcaactttgatcctttttgccaattttgacaggtcaatgcctacatgac-tgccatgtgtgtaattattaaattaa 18979046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 245 - 420
Target Start/End: Original strand, 45112875 - 45113043
Alignment:
Q  245 aaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgca 344  Q
    |||||||||||||||||||| || ||| ||||| ||| |||||| | ||| |||||| | ||| || |||||||| |||| |||||||||||||||||||    
T  45112875 aaagtgcatttttcctccct-aactttcaaaaatttgtaattttagtctc-taagtacaaaaattataattttggtcccctaagaattagcccctttgca 45112972  T
Q  345 attttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaattt 420  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||||     ||||||||||||||||||||||||||    
T  45112973 attttgatcttttttatcaattttgactggtcaatacctacgtgg-----cacgtgtgtaattattgaattaattt 45113043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 10006343 - 10006521
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| |||||||||  |||| ||||||||||||||| |||| |||||||||    
T  10006343 tggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccct 10006442  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  |||| |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  10006443 ttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 10006521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 24122883 - 24123058
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||| |||| || ||| ||||| ||||||||||| || |||||||| | |||||| |||||| | |||| |||| |||||  |||    
T  24122883 ggctaaagtgcatttttcccccct-aactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttctt 24122981  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  ||||||||||||||||||||||||||||||| | || ||||||||||||| ||||||    
T  24122982 tgcatctttggtccttttggtcaattttgaccggtcaatgcctacgtggcacgacatgtgtgtaattattaaattaa 24123058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 30335639 - 30335816
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||   ||||||| | ||| |||||||||  ||||| |||| ||||||||||    
T  30335639 ggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccctt 30335738  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  ||||||||||||  ||||| || |  |||||||||||| ||||||| || ||||||||    
T  30335739 tgcatctttggtccttttgttcaattttgaccaagtcaacgcatgtgtggcatgccacatgtgtaaataatgaattaa 30335816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 22220387 - 22220556
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||| ||| ||| ||||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||||||| |    
T  22220387 tggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccat 22220486  T
Q  340 ttgcaattttgatcctttttatcaattttga-ccggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||  |||| ||||||| ||||||||||| |  ||||||||  |  ||||||||||||||||||||||    
T  22220487 ttgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtgtaatta 22220556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 244 - 381
Target Start/End: Complemental strand, 29968434 - 29968298
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||| |||||||| | ||||||||||| ||| |||| |||| |||||||| ||||    
T  29968434 taaagtgcacttttcc-cccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattgc 29968336  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgc 381  Q
    || ||| ||| ||||   ||||||||||||||||||||    
T  29968335 aactttaatcattttggccaattttgaccggtcaatgc 29968298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 18970942 - 18971085
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||| ||| ||||||||||| |||||||| | |||||||||||||| ||||  |||| ||| ||||||||||| |||| ||||||||  |||||||||||    
T  18970942 aaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgcaactttggtcctttttgccaattttgacc 18971041  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||| || | ||||| ||||||||||||| ||||||    
T  18971042 ggtcaatgcctacatgac-tgccatgtgtgtaattattaaattaa 18971085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 22221465 - 22221297
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||||||||||||||| || |||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  22221465 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22221366  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    | ||  ||||||||||||   ||||||||||  |||||| || ||  ||| ||||||||||||||||||    
T  22221365 tacatctttgatccttttagccaattttgacttggtcaacgcttatttggtatgccacgtgtgtaatta 22221297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 22227807 - 22227639
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||||||||||||||| || |||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  22227807 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22227708  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    | ||  ||||||||||||   ||||||||||  |||||| || ||  ||| ||||||||||||||||||    
T  22227707 tacatctttgatccttttagccaattttgacttggtcaacgcttatttggtatgccacgtgtgtaatta 22227639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 412
Target Start/End: Complemental strand, 42982758 - 42982584
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| || |||| ||||||||| ||| |||||||||| |||    | | |||||||||||||| |||| ||||||||||||| ||    
T  42982758 ggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgacccctcaagaattagcccatt 42982659  T
Q  341 tgcaattttgatcctttttat---caattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattga 412  Q
    | ||||||||||| ||||| |   ||||||||||||||||| ||||| |||| | || |||||||||||||||||    
T  42982658 tacaattttgatcattttttttgccaattttgaccggtcaaagcctatgtggtacgctacgtgtgtaattattga 42982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 273 - 417
Target Start/End: Complemental strand, 24123967 - 24123827
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||||||||||||||||||| ||||||   ||| ||||||||| ||| || |||| ||||||||||||||  |||| |||||||  ||||||||||||    
T  24123967 aaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtccttttggtcaattttgacc 24123868  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||| ||||    ||||||| |||||||||||||||||| ||||||    
T  24123867 ggttaatg----cgtggcacgccacgtgtgtaattattaaattaa 24123827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 18488336 - 18488187
Alignment:
Q  268 tttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattt 367  Q
    |||| ||||| |||||||||| | | ||||  || | |||||||||||||||||| | ||||  || ||||||||||  |||| ||||||| | || |||    
T  18488336 ttttaaaaaagttgcaattttagtcccctatatacaaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttgaccagttt 18488237  T
Q  368 tgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  18488236 tgaccagtcaatgcctacgtggcatgccaaatgtgtaattattgaattaa 18488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 241 - 420
Target Start/End: Complemental strand, 45114617 - 45114438
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||| ||||||| |||||| ||| ||| ||| ||||||||||||||||||    ||| ||| | ||||||||||||||||| |  |||| ||| || | |    
T  45114617 ggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcctct-aagatttaacctcat 45114519  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt-gaattaattt 420  Q
    ||||| ||| ||| ||||  | |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  45114518 tgcaactttaatcattttggttaattttgaccggtcaatgcctacgtggcacaccacgtgtgtaattattggaattaattt 45114438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 1824174 - 1824011
Alignment:
Q  246 aagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaa 345  Q
    |||||||||||||| ||  ||| ||| |||||||||||||||||| | |||||||| | |||||||||||||||||||| |||| ||||||  ||||||     
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1824075  T
Q  346 ttttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
     |||| |||||||  |||||||||||    |||| |||||||||| | ||||| ||||||||||    
T  1824074 ctttggtccttttggtcaattttgacttattcaacgcctacgtggtaggccacatgtgtaatta 1824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 1858619 - 1858456
Alignment:
Q  246 aagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaa 345  Q
    |||||||||||||| ||  ||| ||| |||||||||||||||||| | |||||||| | |||||||||||||||||||| |||| ||||||  ||||||     
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1858520  T
Q  346 ttttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
     |||| |||||||  |||||||||||    |||| |||||||||| | ||||| ||||||||||    
T  1858519 ctttggtccttttggtcaattttgacttattcaacgcctacgtggtaggccacatgtgtaatta 1858456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 244 - 371
Target Start/End: Original strand, 11282011 - 11282138
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||| | ||||||| ||||||||| |||||||||||||| ||||  || | |||  ||||||||| ||||| |||| ||| |||||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T
Q  344 aattttgatcctttttatcaattttgac 371  Q
    |||||||||| |||| ||||||||||||    
T  11282111 aattttgatctttttgatcaattttgac 11282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 5513982 - 5514111
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | |||| || ||| |||||||| ||||||||||| |||||||| | |||||||||||||| ||||| || | ||||||||||    
T  5513982 ggctaaagtgcacttttaccccct-aactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctt 5514080  T
Q  341 tgcaattttgatcctttttatcaattttgac 371  Q
    ||||  |||| ||||||| ||||||||||||    
T  5514081 tgcatctttggtccttttgatcaattttgac 5514111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 11283310 - 11283180
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||||||| || ||||||| ||| ||||| ||| |||||| ||| |||| ||||| |||  |||||||||| |||| || | ||||||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctt 11283211  T
Q  341 tgcaattttgatcctttttatcaattttgac 371  Q
    ||||||||||||| ||||  |||||||||||    
T  11283210 tgcaattttgatcattttagtcaattttgac 11283180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 417
Target Start/End: Complemental strand, 30570286 - 30570181
Alignment:
Q  312 aattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattg 411  Q
    ||||||||||||| |||| ||||||| ||||||  |||| |||||||   ||||||||||| ||||||| |||||||||| ||||||||||||||||||     
T  30570286 aattttggccccctaagatttagcccttttgcatctttggtccttttggccaattttgaccagtcaatgtctacgtggcacgccacgtgtgtaattattt 30570187  T
Q  412 aattaa 417  Q
    ||||||    
T  30570186 aattaa 30570181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 525 - 617
Target Start/End: Complemental strand, 39889410 - 39889321
Alignment:
Q  525 actcatcaaggtgcttcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||| ||||| | ||||||||||||||||||| || ||||||||||||   ||||||||||||||||||||||| ||||||||||||| ||||    
T  39889410 actcctcaagattcttcttcttcatactcctcaagattcttcttcttc---cattcaaacccaaactcatgaatcttcatcatcttcaactca 39889321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 617
Target Start/End: Original strand, 28977933 - 28978009
Alignment:
Q  538 cttcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    ||||||||||||||||||| || ||||   ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  28977933 cttcttcttcatactcctcaagattct---tcttcttccattcaaacccaaactcatgaatcttcatcatcttcaactca 28978009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 243 - 402
Target Start/End: Original strand, 43661267 - 43661427
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    |||||||||| |||||  ||||||||||| ||||| || ||||||||| | | || ||| | |||||| ||||||||||||| |||| ||||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  343 caattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtg 402  Q
    ||  |||| | |||||  |||| |||||||  ||||| || || |||||||||||||||||    
T  43661367 catctttggttcttttggtcaactttgaccaagtcaacgcatatgtggcatgccacgtgtg 43661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 1823552 - 1823660
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||| | ||||||| ||||||||||||||||||||| ||  ||||||| | |||||||||||| || |||| |||| ||||||| ||    
T  1823552 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1823651  T
Q  341 tgcaatttt 349  Q
    |||| ||||    
T  1823652 tgcattttt 1823660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 1857997 - 1858105
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||| | ||||||| ||||||||||||||||||||| ||  ||||||| | |||||||||||| || |||| |||| ||||||| ||    
T  1857997 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1858096  T
Q  341 tgcaatttt 349  Q
    |||| ||||    
T  1858097 tgcattttt 1858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 8388464 - 8388593
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||  ||| ||||||||| |||||||||| ||| |||| ||| | |||||| ||||||||||||| |||| ||||||||||    
T  8388464 ggctaaagtgcactttcccccc--taacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctt 8388561  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    |||  ||||| |||||||   |||||||||||    
T  8388562 tgcgtttttggtccttttgcccaattttgacc 8388593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 30568950 - 30569062
Alignment:
Q  305 aaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    |||||| |||||||  |||| |||| ||||||||||||||  |||| |||||||   ||||| ||||| ||||||| |||||||||| ||||||||| ||    
T  30568950 aaactataattttgatcccctaagatttagcccctttgcatctttggtccttttggccaattgtgaccagtcaatgtctacgtggcacgccacgtgtata 30569049  T
Q  405 attattgaattaa 417  Q
    |||||| ||||||    
T  30569050 attatttaattaa 30569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 407
Target Start/End: Original strand, 36249550 - 36249718
Alignment:
Q  239 atggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    |||||||||||||| |||||| ||||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||| |||   |||  | |  |||| |||    
T  36249550 atggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctcctatgaataaaaatgacaaatttaatcccttatgttttaggccc 36249649  T
Q  339 tttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaatt 407  Q
    |||||||| || ||||||||   ||||||||||| |||||||| |  |||||||||||| ||| |||||    
T  36249650 tttgcaatattaatccttttgtccaattttgaccagtcaatgcatgtgtggcatgccacatgtataatt 36249718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 415
Target Start/End: Complemental strand, 30336602 - 30336427
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| || | | ||| ||| ||| ||||||||  |||||| |||||||||||| | |||||||||||||  ||| | |||| ||||||  ||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    ||||  |||| |||||||  ||||||||||||  |||||||| |  |||||||||||||| ||||| || ||||||    
T  30336502 tgcatctttggtccttttggtcaattttgaccaagtcaatgcatgtgtggcatgccacgtatgtaaataatgaatt 30336427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 43661924 - 43661747
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||| ||||||| |||||| ||||||| ||| ||||| ||||||||||   |  ||| ||| | |||||| ||||||||||||| |||| || ||||  |    
T  43661924 ggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaat 43661825  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| ||||||| |||||||||||||  ||||| || |  |||||||||||| ||||||| || ||||||||    
T  43661824 tgcatctttggtccttttgatcaattttgaccaagtcaacgcatgtgtggcatgccacatgtgtaaataatgaattaa 43661747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 8389787 - 8389659
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| | ||||| ||| ||||| |||||||||||| | | || ||| | ||||||||||||| | |||| |||| ||| ||||||| |    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacccctttac 8389688  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    | ||||| ||||||| | |||||||||||    
T  8389687 atttttggtccttttgaacaattttgacc 8389659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 17844395 - 17844450
Alignment:
Q  362 caattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| |||||||||||||| ||||| | |||||||||||||||||||||||    
T  17844395 caattttgatcggtcaatgcctacatggcacgtcacgtgtgtaattattgaattaa 17844450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 379
Target Start/End: Original strand, 29043400 - 29043536
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    ||||||| || ||||||||||||||  || ||||| | || |||||| || |||| ||| | |||||||||||||  ||| | |||| ||||||||||||    
T  29043400 ctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttg 29043499  T
Q  343 caattttgatcctttttatcaattttgaccggtcaat 379  Q
     |  ||||||||||||   ||||||||||| ||||||    
T  29043500 tatctttgatccttttagacaattttgaccagtcaat 29043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 24483142 - 24483200
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaa 298  Q
    ||||||||||||| |||||| | | ||||||| |||||||||||||||||||| |||||    
T  24483142 tggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 5514370 - 5514294
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttg 318  Q
    |||||||||||| ||||  |||| ||||||| |||||||||||||||| |||| |||| || | ||||||||||||||    
T  5514370 ggctaaagtgcactttta-tcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 358
Target Start/End: Complemental strand, 32207394 - 32207309
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttt 358  Q
    ||||||||||||||||| |  |||||||| | ||||||||||||||||| |  |||| |||||| |||||||  |||| |||||||    
T  32207394 aaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctttgcatctttggtcctttt 32207309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 32968456 - 32968586
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||  |||| ||||||||| || | ||||  |||| ||||||||||||| | | |  ||||||||||    
T  32968456 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccctt 32968555  T
Q  341 tgcaattttgatcctttttatcaattttgac 371  Q
    |||| |||   ||||||| | ||||||||||    
T  32968556 tgcattttcagtccttttgagcaattttgac 32968586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 358
Target Start/End: Complemental strand, 24488748 - 24488664
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttt 358  Q
    |||||||||||||||||||| ||||| |||  |||| |||||||| |||||  |||| |||||||| |||||| ||| ||| ||||    
T  24488748 aaaaacttgcaattttggccccctaaatatcaaaacaacaatttt-gccccgtaagatttagccccattgcaaatttcatcatttt 24488664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 3819488 - 3819539
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcc 292  Q
    |||||||||||||||||||| ||||||| ||| ||||  ||||||||||||||    
T  3819488 tggctaaagtgcatttttcc-cccttaagtttcaaaatgttgcaattttggcc 3819539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 11288875 - 11288831
Alignment:
Q  365 ttttgaccggtcaatgcctacgtggcatgccacgtgtgtaattat 409  Q
    ||||||||||||||||  ||||||||| | |||||||||||||||    
T  11288875 ttttgaccggtcaatgtttacgtggcacgtcacgtgtgtaattat 11288831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 11456638 - 11456694
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctccta 297  Q
    |||||||||||| |||||  ||| ||||||| ||||| |||||||||||||| ||||    
T  11456638 ggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 38974794 - 38974878
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    ||||||||||||| |||||| ||| ||| ||| ||||  |||| ||||||||| || | ||||  |||| |||||||||||||||    
T  38974794 tggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 38974878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 39005892 - 39005976
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    ||||||||||||| |||||| ||| ||| ||| ||||  |||| ||||||||| || | ||||  |||| |||||||||||||||    
T  39005892 tggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 39005976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 132; Significance: 3e-68; HSPs: 3)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 241 - 420
Target Start/End: Original strand, 17470 - 17649
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||||||| |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||    
T  17470 ggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccctt 17569  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaattt 420  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17570 tgcaatttcgatcttttttaccaattttgaccggtcaatgcctacgtggcatgccacgagtgtaattattgaattaattt 17649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 527 - 617
Target Start/End: Original strand, 17758 - 17848
Alignment:
Q  527 tcatcaaggtgcttcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17758 tcatcaagatgcttcttcttcatactcctccaggttcgtcttcttcttccattcaaacccaaactcatgaatattcatcatcttcttctca 17848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 417
Target Start/End: Complemental strand, 18879 - 18701
Alignment:
Q  239 atggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    |||||||||||||| |||| | | | ||| ||||||||| |||||||||||| | |||| ||| | |||||| ||||||||||||  || | ||||||||    
T  18879 atggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagcccc 18780  T
Q  339 tttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
     |||||| ||| ||| ||||  |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  18779 attgcaactttaatcattttggtcaattttgaccggtcaatgcctacgtggcacaccacttgtgtaattattgaattaa 18701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 2e-66; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 36449778 - 36449954
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||| |||||    
T  36449778 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattaggccctt 36449877  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36449878 tgcaattttgatccttttgaccaattttgaccggtcaatgcctacgtggcatgccatgtgtgtaattattgaattaa 36449954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 244 - 415
Target Start/End: Original strand, 7898694 - 7898865
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||  ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgc 7898793  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    |||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  7898794 aattttaatccttttgatcaattttgaccagtcaatgcttacgtggcatgccacgtgtgtaattattaaatt 7898865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 36451018 - 36450846
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  36451018 taaagtgcacttttcc-cccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgc 36450920  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||   |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  36450919 aattttgatccttttggccaattttgactggtcaatgcctacgtggcataccacgtatgtaattattgaattaa 36450846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 38840594 - 38840418
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||| ||| |||||||| | ||||||||||||| |||||| |||| |||||||| |    
T  38840594 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagccccat 38840495  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  38840494 tgcaattttaatccttttgatcaattttgaccggtcaatgcctacgcggcgtgccacgtgtgtaattatttaattaa 38840418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 38839242 - 38839418
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||| | ||||||||||| |||||||||||||||| ||| ||||| || | |||||||||||||||||||| |||| |||||||| |    
T  38839242 ggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccat 38839341  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| ||| ||||  |||||||||||| |||||||| |||||||| |||||| |||||||||||| ||||||    
T  38839342 tgcaattttaatcattttggtcaattttgacccgtcaatgcttacgtggcgtgccacttgtgtaattatttaattaa 38839418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 7899983 - 7899814
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||| | |||||||| ||||||||||||||| |||||| |||| |||||||| |    
T  7899983 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagccccat 7899884  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    || || ||| ||| ||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  7899883 tgtaactttaatctttttggtcaattttgaccggtcaatgcatacgtggcacgccacgtgtgtaattatt 7899814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 41879313 - 41879137
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||| || |||| | ||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||  ||||| || | ||||| || |    
T  41879313 ggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagcaccat 41879214  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| ||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  41879213 tgcaattttaatcattttgatcaattttgaccagtcaatgcctacgtggcgtgccacgtgtgtaattatttaattaa 41879137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 13570658 - 13570482
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||  ||| ||| ||| |||||||||||||||| | | | |||||| | |||||| |||||||| |||||||||||||| |||||    
T  13570658 ggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattagtccctt 13570559  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    | ||| |||||||||||||  ||||||||| |||||||| |||| |||||| |||||||| ||||||||| ||||||    
T  13570558 tacaactttgatcctttttgccaattttgagcggtcaattcctatgtggcacgccacgtgcgtaattatttaattaa 13570482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 22588054 - 22587879
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||| | | ||| ||| |||||||||||||||||||| |||| ||| | |||||||||||||||||||  |||| ||||||||||    
T  22588054 ggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcc-cctatgtacaaaaactacaattttggccccttaagatttagcccctt 22587956  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||   |||||| |||| ||||| | ||| ||||||||||||||||||| ||||| ||||||    
T  22587955 tgcatctttggtccttttggccaatttcgaccagtcaacgtctatgtggcatgccacgtgtgtatttatttaattaa 22587879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 41878091 - 41878264
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaact---tgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcc 336  Q
    ||||||||||||| ||| || ||||||| ||| |||||||   ||||||||||||| |||||||| |||||||||||||||||||||  |||| ||||||    
T  41878091 tggctaaagtgcactttccc-cccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcc 41878189  T
Q  337 cctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || |||||||||| ||| ||||  |||||||||||||||||||| ||||||||     |||||||||||||||| ||||||    
T  41878190 ccattgcaattttaatctttttggtcaattttgaccggtcaatg-ctacgtgg-----cacgtgtgtaattatttaattaa 41878264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 405
Target Start/End: Original strand, 11257622 - 11257786
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| ||||  ||| ||| ||||||||||||||||   | |||||||||| ||||||||||||||||| || |||| |||||||| |    
T  11257622 ggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaac-cctaagtataaaaactacaattttggcctcctaagatttagccccat 11257720  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaa 405  Q
    ||||| |||||||||||| ||||||||||||   ||||| |||| |||||||||||||||||||||    
T  11257721 tgcaaatttgatccttttgatcaattttgacatagtcaacgcctgcgtggcatgccacgtgtgtaa 11257786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 22848191 - 22848368
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||| ||| ||| |||||||||||||||||| | ||||| || | |||||||||||||||| ||| |||| ||||||||||    
T  22848191 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccctt 22848290  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| ||||||| ||||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  22848291 tgcagctttggtccttttgatcaattttgacttattcaacgcctacgtggcaagccacgtgtgtaattaattaattaa 22848368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 18299372 - 18299504
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||| ||| ||| |||||||| ||||||||||| |||||||||| |||||||||||||||||||| | || ||||||| |    
T  18299372 tggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagccctt 18299471  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||  ||||||||||||  ||||||||||||    
T  18299472 ttgcatctttgatccttttggtcaattttgacc 18299504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 22587564 - 22587676
Alignment:
Q  305 aaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    |||||||||||||||||||| |||| |||||| |||||||  |||| |||||||   ||||||||||| |||||||||||| ||||||||||||||||||    
T  22587564 aaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaattttgaccagtcaatgcctacatggcatgccacgtgtgta 22587663  T
Q  405 attattgaattaa 417  Q
    |||||| ||||||    
T  22587664 attatttaattaa 22587676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 11938889 - 11938760
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| |||||||||||||||||| |||||||||| | ||| || ||||||| ||||| |||||||||| | ||    
T  11938889 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtaca-aaaatataattttgcccccctaagaattagctcttt 11938791  T
Q  341 tgcaattttgatcctttttatcaattttgac 371  Q
    ||||||||||||| |||||  ||||||||||    
T  11938790 tgcaattttgatcatttttgccaattttgac 11938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 11258912 - 11258735
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||||||| ||  |  ||| ||| |||||||||||||||||||| |||||||| | ||||||||||||| | |||| |||| |||||||| |    
T  11258912 ggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccat 11258813  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  ||||||||||||  ||||||||||||  ||||| || | | |||||||||||| ||| || || ||||||||    
T  11258812 tgcagatttgatccttttggtcaattttgacctagtcaacgcttgcatggcatgccacgcgtgcaaataatgaattaa 11258735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 241 - 358
Target Start/End: Complemental strand, 23869635 - 23869519
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||| ||||| || | ||||||||||||| || ||| |||| ||||||||||    
T  23869635 ggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccctt 23869537  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||  ||||||||||||    
T  23869536 tgcatctttgatcctttt 23869519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 8534586 - 8534758
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||  |||||| ||||||||||| |||||||| ||||||||  |   ||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  8534586 taaagtgctcttttcc-cccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttgg-tccccaagaattagcctctttgc 8534683  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||  |  ||||||   |||||||||||  |||||| |||||  ||||| || ||||||||||||||||||||||    
T  8534684 aatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcaggctacgtgtgtaattattgaattaa 8534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 26544152 - 26544325
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||  ||| ||||||||||||| || |||||||||  ||||||||| | |||||||| |||| ||| || |||| ||||| |||||||    
T  26544152 taaagtgcacttttctacccctaatttttaaaaatttacaattttggt-tcctaagtacaaaaactacagttttagcctcctaagatttagcacctttgc 26544250  T
Q  344 aattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| ||||||| |||||||||||||  ||||| || || |||||||||| ||||||||| || ||||||||    
T  26544251 atatttggtccttttgatcaattttgaccaagtcaacgcatatgtggcatgccgcgtgtgtaaataatgaattaa 26544325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 16446154 - 16446330
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||  ||||||| ||| ||||||||||||||||  |||| ||| || | ||||||||||||||   |||||||||||| ||| ||    
T  16446154 ggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttgataccccaagaattaacccatt 16446253  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaa-ttattgaattaa 417  Q
    ||||||  |  ||||||   |||||||| ||  |||||||||||  ||||| ||||||||||||| ||||||||||||    
T  16446254 tgcaatagtagtcctttagttcaattttaactcgtcaatgcctatatggca-gccacgtgtgtaatttattgaattaa 16446330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 18797246 - 18797415
Alignment:
Q  241 ggctaaagtgcatttttcctccct-taatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| |||||| |||  ||| ||| ||||||||||||||||| || | |||||||  |||||||||||||| ||||| || | |||||||||    
T  18797246 ggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccct 18797345  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||  |||| |||||||   ||||||||||  |||||| || ||  ||||||||||||||||||||||    
T  18797346 ttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 18797415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 18904367 - 18904484
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||| ||||||||||||| | |||||| | |||||||||||||||  ||| |||||||||||||||    
T  18904367 ggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccctt 18904466  T
Q  341 tgcaattttgatcctttt 358  Q
    | ||  |||| |||||||    
T  18904467 tacatctttggtcctttt 18904484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 802691 - 802516
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||||| |||| || ||| |||||||||||||||||||| |||  ||| | |||||||||||||| ||| | |||| ||  ||||||    
T  802691 ggctaaagtgtacttttcccccct-aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctt 802593  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| ||||||   |||||||||| | |||||| |||| |||||||| || ||||||||||||| ||||||    
T  802592 tgcatatttggtcctttaggtcaattttgagcagtcaatacctaggtggcatgtcatgtgtgtaattattaaattaa 802516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 273 - 417
Target Start/End: Complemental strand, 810850 - 810706
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||||||||||||||||| |||  ||| | |||||||||||||| ||| | |||| ||  ||||||||||  |||| ||||||  ||||||||||| |    
T  810850 aaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttagatcaattttgagc 810751  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
     |||||| |||| |||||||| || ||||||||||||| ||||||    
T  810750 agtcaatacctaggtggcatgtcatgtgtgtaattattaaattaa 810706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 18906088 - 18905912
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |   ||| ||| |||||||||||||||| ||| |||||||| | ||||||||||||| | |||| |||| ||||| | ||    
T  18906088 ggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttag-cccctaagatttagctcatt 18905990  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| || |||| ||||||||||||    |||| ||||||||||||  ||||||||||||||| | ||||||    
T  18905989 tgcatctttggtctttttgatcaattttgacttattcaacgcctacgtggcagaccacgtgtgtaattaattaattaa 18905912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 8535752 - 8535652
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||| || |||||||||  ||| ||||||||||||| |||||||  |   |||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  8535752 taaagtacacttttcctcc--taacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccctttgc 8535655  T
Q  344 aat 346  Q
    |||    
T  8535654 aat 8535652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 617
Target Start/End: Original strand, 8972574 - 8972648
Alignment:
Q  540 tcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||||| |||||||||||| |||||   ||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  8972574 tcttctacatactcctccatgttct---tcttctttcattcaaacccaaactcatgaatcttcatcatcttcaactca 8972648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 13568004 - 13568148
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgac- 371  Q
    |||||||||||||||||||| ||||| || | ||||||||||||||    ||||| ||||||||||||||||||  |  || |||   |||||||||||     
T  13568004 aaaaacttgcaattttggccccctaaatacaaaaactacaattttg--atcccaaaaattagcccctttgcaatagtagtcatttaggtcaattttgact 13568101  T
Q  372 cggtcaatgcctacgtggcatgccacgtgtgtaatt-attgaattaa 417  Q
    ||||||| |||||  ||||| ||||||||||||||| ||||||||||    
T  13568102 cggtcaacgcctatatggcaggccacgtgtgtaattcattgaattaa 13568148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 372
Target Start/End: Original strand, 24475241 - 24475355
Alignment:
Q  258 cctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatccttt 357  Q
    |||||| ||| ||| ||||||||| |||||| ||| |||||||||| |||||||||||||||||||| |  | ||||| | ||||||  |||| ||||||    
T  24475241 cctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatctttggtccttt 24475340  T
Q  358 ttatcaattttgacc 372  Q
    |  ||||||||||||    
T  24475341 tggtcaattttgacc 24475355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 28617926 - 28618098
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||| ||||||| |||||| || ||| |||| ||||||||||||||| || ||||| | ||||| ||||||| |||||| |||| |||||||||||||    
T  28617926 taaagtacattttttctccct-aactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgc 28618023  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| |  ||||  || ||||||||    |||||||||||||||||  ||||||||||||||| | ||||||    
T  28618024 atctttggttattttggtctattttgactaattcaatgcctacgtggcagaccacgtgtgtaattaattaattaa 28618098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 18868924 - 18869001
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttg 318  Q
    |||||||||| | |||||| ||| ||| ||| |||||||||||||||||||||||||| || | ||||||||||||||    
T  18868924 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 13030293 - 13030457
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||||| ||  ||| ||| ||||||||| |||||||||| |||||||| | ||| ||||||||| |||||| |||| ||||| | |||    
T  13030293 gctaaagtgcacttttccccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttttgccccctaagatttagctctttt 13030389  T
Q  342 gcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||  |||| || ||||  |||||||||||    |||| |||||||||||| ||||| ||||||||||    
T  13030390 gcatctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacatgtgtaatta 13030457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 32739623 - 32739706
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    |||||||||| ||||||  |||| ||| ||| |||||||||||||||||||| | || ||| | ||||||||||||||||||||    
T  32739623 ggctaaagtgtattttttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 540 - 612
Target Start/End: Original strand, 35780107 - 35780176
Alignment:
Q  540 tcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttca 612  Q
    |||||| |||||||||||| |||||   |||||||||||||||||||||| |||||| | |||||||||||||    
T  35780107 tcttctacatactcctccatgttct---tcttcttccattcaaacccaaattcatgattcttcatcatcttca 35780176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 273 - 417
Target Start/End: Complemental strand, 26545590 - 26545445
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| ||||||||||| || | ||| || | ||| || ||||||| ||| | |||| ||||||||||||||  |||| || |||| |||||||||||||    
T  26545590 aaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaattttgacc 26545491  T
Q  373 -ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
       |||| || || |||||||||||||||||||| || ||||||||    
T  26545490 aaatcaacgcatatgtggcatgccacgtgtgtaaataatgaattaa 26545445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 610
Target Start/End: Complemental strand, 20440180 - 20440113
Alignment:
Q  540 tcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatctt 610  Q
    |||||| |||||||||||| |||||||||||||   |||||||||||||| |||||| | |||||||||||    
T  20440180 tcttctacatactcctccatgttcttcttcttc---cattcaaacccaaattcatgattcttcatcatctt 20440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 610
Target Start/End: Complemental strand, 20445785 - 20445718
Alignment:
Q  540 tcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatctt 610  Q
    |||||| |||||||||||| |||||||||||||   |||||||||||||| |||||| | |||||||||||    
T  20445785 tcttctacatactcctccatgttcttcttcttc---cattcaaacccaaattcatgattcttcatcatctt 20445718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 406
Target Start/End: Complemental strand, 27553788 - 27553701
Alignment:
Q  319 gccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaat 406  Q
    |||||| |||| |||||||||||||||| | || ||||||  ||||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  27553788 gccccctaagatttagcccctttgcaatatcga-ccttttggtcaattttgaccgagtcaacgcctaagtggcatgccacgtatgtaat 27553701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 32739715 - 32739827
Alignment:
Q  305 aaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    |||||||||||||||||||  |||| |||| |  ||| ||  |||| ||| |||   ||||||||||||||||| |||||| | |||  |||||||||||    
T  32739715 aaactacaattttggccccttaagatttagtcattttccatctttggtccatttggccaattttgaccggtcaacgcctacatcgcacaccacgtgtgta 32739814  T
Q  405 attattgaattaa 417  Q
    |||||||||||||    
T  32739815 attattgaattaa 32739827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 1034570 - 1034475
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcc 336  Q
    |||||||||||| |||||| ||||||| ||| |||||| ||||||||||||| |||| |||   |||| ||||||| | ||||| |||| ||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 417
Target Start/End: Complemental strand, 18869224 - 18869086
Alignment:
Q  281 gcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccc-ctttgcaattttgatcctttttatcaattttgac-cggtcaa 378  Q
    ||||||||||||| ||||||| | |||||||||||||   |||| |||| |||||||  ||||||  |||| || |||| ||||||||||||    ||||    
T  18869224 gcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatctttggtctttttgatcaattttgacttattcaa 18869125  T
Q  379 tgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
     ||||| |||||| |||||||||||||||| | ||||||    
T  18869124 cgcctatgtggcaggccacgtgtgtaattaattaattaa 18869086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 24476917 - 24476863
Alignment:
Q  269 ttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccc 323  Q
    ||||||||||||| |||||||| | |||||||| | |||||||||||||| ||||    
T  24476917 ttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccc 24476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 18300791 - 18300743
Alignment:
Q  275 aaacttgcaattttggcctcctaagtatagaaactacaattttggcccc 323  Q
    ||||||||||||||| || |||||||| | |||||||||||||| ||||    
T  18300791 aaacttgcaattttgaccccctaagtacaaaaactacaattttgacccc 18300743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 26829389 - 26829333
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctccta 297  Q
    |||||||||||| ||||| |||||||| ||||||||  |||| ||||||||| ||||    
T  26829389 ggctaaagtgcacttttcatcccttaagttttaaaatgttgcgattttggcccccta 26829333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 54540891 - 54540715
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||||||| || | |||||| | |||||||||||||||||||| |||| ||||||||||    
T  54540891 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccctt 54540792  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  54540791 tgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattaatgaattaa 54540715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 244 - 415
Target Start/End: Complemental strand, 7268924 - 7268754
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| |||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||| ||||    
T  7268924 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgc 7268826  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  7268825 aattttaatccttttgatcaattttgaccggtcaatgcttacgtggcacgccacgtgtgtaattattaaatt 7268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 22776913 - 22776737
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| | ||| |||||||||||||| |||| ||| | |||||||||||||||||||| |||||||||||||||    
T  22776913 ggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcccctt 22776814  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22776813 tgcatatttggtccattttcccaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 22776737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 244 - 415
Target Start/End: Original strand, 7267647 - 7267817
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||| | ||||    
T  7267647 taaagtgcacttttcc-cccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcctcattgc 7267745  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    || ||| ||||||||  ||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  7267746 aactttaatccttttggtcaattttgaccggtcaatgcatacatggcacgccacgtgtgtaattattaaatt 7267817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 55192095 - 55191920
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| ||||| || ||||||| ||| ||||||||||||||||||||  ||||||| | ||||||||||||||||||| ||||||||| ||||||    
T  55192095 ggctaaagtgtattttccc-cccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctt 55191997  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||| ||||| |||||||||| |||| |||| |||| |||||  |||| |||||||||||||||||||    
T  55191996 tgcaattttgatcatttttgtcaattttgatcggttaatgtctacatggcacaccacatgtgtaattattgaattaa 55191920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 19984849 - 19985025
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| |||||||||||||||||||| |||| ||| | |||||||||||||| |||   |||| ||| ||||||    
T  19984849 ggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 19984948  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  19984949 tgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacatgtgtaattattaaattaa 19985025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 54539755 - 54539931
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||||||  || ||||| || | ||||||||||||||  |||| |||| ||||| | ||    
T  54539755 ggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcatt 54539854  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| |||||||||||||  |||||||||| |||||| || |||||||||||||||||||||||||| ||||||||    
T  54539855 tgcaactttgatcctttttgccaattttgactggtcaaagcatacgtggcatgccacgtgtgtaattaatgaattaa 54539931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 19986173 - 19985995
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcc--tcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    |||||||||||| |||||| | ||||| ||| ||||||||||||||||||||  ||||| ||||| |||||||||||||| ||| | |||| ||| ||||    
T  19986173 ggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacccc 19986074  T
Q  339 tttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |||| || |||   |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  19986073 tttgcatctttggtcatttcggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtgtaattattaaattaa 19985995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 311 - 417
Target Start/End: Original strand, 22775816 - 22775922
Alignment:
Q  311 caattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  22775816 caattttggccccccaagaattagcccctttgcagatttggtcctttttcccaattttgaccggtcaatgcctacgtggcatgttacgtgtgtaattatt 22775915  T
Q  411 gaattaa 417  Q
    |||||||    
T  22775916 gaattaa 22775922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 242 - 405
Target Start/End: Original strand, 8456479 - 8456642
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||| | |||| |||||| |||||||||||||||||| | ||||| || | |||||||||||||||||||| |||| |||||| | ||    
T  8456479 gctaaagtgcactttttccccct-aattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcctcatt 8456577  T
Q  342 gcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaa 405  Q
    |||| ||||||||||||  ||||||||||||  ||||| |||| |||||||||||||||||||||    
T  8456578 gcaaatttgatccttttagtcaattttgacctagtcaacgcctgcgtggcatgccacgtgtgtaa 8456642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 34940264 - 34940112
Alignment:
Q  265 taatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaa 364  Q
    ||||||||||||||||||||||||   ||| || ||||| ||| ||||||||||| || | || ||||||||| |||| |  |||| || ||||| ||||    
T  34940264 taatttttaaaaacttgcaattttaatctcttatgtataaaaattacaattttggtcctctaataattagcccatttgtatatttggtcttttttctcaa 34940165  T
Q  365 ttttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||| | ||||||||||||| ||||||||| |||||||||||||||||||    
T  34940164 ttttgactgatcaatgcctacgtagcatgccacatgtgtaattattgaattaa 34940112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 51038891 - 51038723
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||| || |||| | | | ||||||||||||||| |||  |||||||  ||||||    
T  51038891 ggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtcccttaagaattgtcccctt 51038792  T
Q  341 tgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||||  || ||||||||| |||||||||||| ||||| ||  |  ||||||||||||||||||||||    
T  51038791 tgcaatagtggtcctttttagcaattttgaccgagtcaacgctgatttggcatgccacgtgtgtaatta 51038723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 241 - 407
Target Start/End: Original strand, 7758402 - 7758569
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||||||| ||| ||||||||||||||||| || |||||||| | ||||||||||||| |||||| |||| ||| ||||||    
T  7758402 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccctt 7758501  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatt 407  Q
    || |  |||| |||||||  ||||||||||||  ||||| || || |||||||||||||||| |||||    
T  7758502 tgtatctttggtccttttggtcaattttgacctagtcaacgcttaagtggcatgccacgtgtataatt 7758569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 29931226 - 29931403
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| |||||||||||||||| ||| ||||| || | |||||||||||||||||||| |||| ||| ||||||    
T  29931226 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29931325  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |  |||||||  ||||||||||| | ||||| ||||   |||||| |||||||||||| || ||||||||    
T  29931326 tgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtgtaaataatgaattaa 29931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 29980380 - 29980557
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| |||||||||||||||| ||| ||||| || | |||||||||||||||||||| |||| ||| ||||||    
T  29980380 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29980479  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |  |||||||  ||||||||||| | ||||| ||||   |||||| |||||||||||| || ||||||||    
T  29980480 tgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtgtaaataatgaattaa 29980557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 49216246 - 49216423
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| | | ||| ||| ||||| ||||||||||| || |||| ||| | ||||||||||| || ||||  |||| ||||| | |    
T  49216246 tggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcat 49216345  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  ||||||| ||||   |||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||    
T  49216346 ttgcatctttgatcattttggccaattttgaccgatcaatgtctacgtggcatgtcacgtgtgtaattatttaattaa 49216423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 53614819 - 53614995
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||| | |  |||  |||| ||||||||||||||| ||||||||||||||||| ||    
T  53614819 ggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttgg-cccccaagaattagcccatt 53614917  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||     |||||| | ||||||||||| || |||| |||||  ||||| | |||||||||||||||| ||||||    
T  53614918 tgcaatagcagtcctttatgtcaattttgactcgatcaacgcctatatggcaggtcacgtgtgtaattattaaattaa 53614995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 10457604 - 10457716
Alignment:
Q  305 aaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    |||||||||||||||||||| | ||||||| |  |||| |  |||| ||||||||  |||||||||| |||||||||||||||||||| |||||||||||    
T  10457604 aaactacaattttggccccctaggaattagtctatttgtatatttggtcctttttcccaattttgactggtcaatgcctacgtggcattccacgtgtgta 10457703  T
Q  405 attattgaattaa 417  Q
    |||||||||||||    
T  10457704 attattgaattaa 10457716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 239 - 370
Target Start/End: Original strand, 46719939 - 46720070
Alignment:
Q  239 atggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||| |||| ||||| ||||||||||||| | || | |||| |||||||     
T  46719939 atggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagccca 46720038  T
Q  339 tttgcaattttgatcctttttatcaattttga 370  Q
    ||||||  |||| |||||||  ||||||||||    
T  46720039 tttgcatatttggtccttttggtcaattttga 46720070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 47614184 - 47614362
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||| | ||  ||| ||| |||||||||||||||||||| |||||||||  |||| ||||||||||||||| |||| |||||| ||    
T  47614184 tggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctct 47614283  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  |||| | |||||  | |||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  47614284 ttgcatctttggtgcttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 47614362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 244 - 413
Target Start/End: Original strand, 49398130 - 49398298
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||| ||||||||| ||   |||||||  | ||| | | | ||| ||||||||||||| |  |||| ||||| | |||||    
T  49398130 taaagtgcacttttcc-cccttaagttttaaaaaattattattttggtgttctatgaacaaaaattacaattttggcctcttaagatttagctcatttgc 49398228  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaa 413  Q
    || |||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  49398229 aactttgatcctttttaccaatgttgaccggtcaatgcctacgtggcacgccatgtgtgtaattactgaa 49398298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 51037535 - 51037703
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| ||||| |||||||| ||| ||||| ||||||||||| ||  ||| | | | ||||||||||||| |||||| ||||||||||||||    
T  51037535 tggctaaagtgcacttttc-tcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcccct 51037633  T
Q  340 ttgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||| |  || ||||||||| |||||||||||| |||||  |  |  ||||||||||||||||||||||    
T  51037634 ttgcagtagtggtcctttttaacaattttgaccgagtcaacactgatttggcatgccacgtgtgtaatta 51037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 51469971 - 51470103
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| ||||||  || ||||||| |||||||||||||||||||| ||||||||   |||| |||||||   ||||| |||| ||||||||     
T  51469971 tggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 51470070  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||| |||| ||||||| |||||||||||||    
T  51470071 ttgcaactttggtccttttgatcaattttgacc 51470103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 12700175 - 12700350
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||  ||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||| | || |||||| | |    
T  12700175 ggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccacat 12700272  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  12700273 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 12700350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 264 - 417
Target Start/End: Original strand, 4271463 - 4271616
Alignment:
Q  264 ttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatca 363  Q
    |||| ||| ||||| ||| |||||||  ||| ||| |||| ||||||||||||| ||  |  |||| ||||||| ||||||| ||||||||||||| |||    
T  4271463 ttaactttcaaaaatttgtaattttgatctcttaaatataaaaactacaattttagcatcttaagatttagcccatttgcaactttgatcctttttgtca 4271562  T
Q  364 attttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||||||| |||  || || ||||| |||||||||||| ||||||    
T  4271563 attttgaccggtcaatgtctatatgacacgccacatgtgtaattattaaattaa 4271616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 415
Target Start/End: Original strand, 55191544 - 55191684
Alignment:
Q  274 aaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccg 373  Q
    |||||||||||||||| |  ||||| || | |||||| ||||||  || | ||||| ||||||||||||||||||||||||||||||||| |||||| |     
T  55191544 aaaacttgcaattttgacaccctaaatacaaaaactataattttc-cctctcaagatttagcccctttgcaattttgatcctttttatcacttttgatca 55191642  T
Q  374 gtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    ||||| ||||| | || | |||||||||||||||||| ||||    
T  55191643 gtcaaagcctatgcggtacgccacgtgtgtaattattaaatt 55191684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 31645005 - 31645149
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||||| ||||||||||| |||||||  | |||||||||||||  || || |||| ||||||| ||||||  |||| ||||||| | |||||||||||    
T  31645005 aaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttgaccaattttgacc 31645104  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| | ||| ||| |||| ||||||||| |||||| ||||||    
T  31645105 ggtcaacgtctatgtgtcatgtcacgtgtgttattatttaattaa 31645149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 240 - 373
Target Start/End: Complemental strand, 52840706 - 52840573
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||  |||||||||| ||| ||| |||||||||||||||||||  ||||| |||  |||| ||||||||| ||||| |||| ||||||||     
T  52840706 tggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagcccca 52840607  T
Q  340 ttgcaattttgatcctttttatcaattttgaccg 373  Q
    |||||| ||| ||| ||||  | |||||||||||    
T  52840606 ttgcaaattttatcattttggttaattttgaccg 52840573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 47610678 - 47610550
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||  ||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| |||||||| ||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 47610579  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    || |||| ||||||| | |||||||||||    
T  47610578 aactttggtccttttgaccaattttgacc 47610550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 540 - 617
Target Start/End: Complemental strand, 18009931 - 18009857
Alignment:
Q  540 tcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||||| |||||||||||| |||||||||||||   ||||||||||||||||||||||| ||||||||||||| ||||    
T  18009931 tcttctacatactcctccatgttcttcttcttc---cattcaaacccaaactcatgaatcttcatcatcttcaactca 18009857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 24516464 - 24516562
Alignment:
Q  245 aaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||| |||| | ||| ||| ||| |||||||||||||||||||  |||||||||| |||||||||||||||||||  |||| ||||| |||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgc 24516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 244 - 410
Target Start/End: Original strand, 39843054 - 39843220
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||| | ||||||| ||| ||||| |||||||||| | | |||| ||| |||||  |||| |||||||| | |  |||||| ||||||||    
T  39843054 taaagtgcactttttcccccttaagtttgaaaaagttgcaattttagtcccctatgtaaagaaatgacaaatttggccctctataaattagtccctttgc 39843153  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    |||||| ||| |||| | | |||||||| |||||| || | | |||||||||||| |||||||||||    
T  39843154 aattttcatcattttgaccgattttgacaggtcaacgcttgcatggcatgccacgcgtgtaattatt 39843220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 47615608 - 47615510
Alignment:
Q  311 caattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||||||||||| |||| ||||||||||||||  |||| |||||||  |||||||||||    ||||||||||||||||| ||||||||||||||||    
T  47615608 caattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtgtaatta 47615510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 346
Target Start/End: Complemental strand, 29932799 - 29932695
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||  |||| |||| |||||    
T  29932799 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtacaaaaactacaattttgaccccttaagatttagtccctt 29932701  T
Q  341 tgcaat 346  Q
    ||||||    
T  29932700 tgcaat 29932695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 346
Target Start/End: Complemental strand, 29981953 - 29981849
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||  |||| |||| |||||    
T  29981953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtacaaaaactacaattttgaccccttaagatttagtccctt 29981855  T
Q  341 tgcaat 346  Q
    ||||||    
T  29981854 tgcaat 29981849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 404
Target Start/End: Original strand, 47609697 - 47609861
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||| |||| |||||| ||| ||| ||| ||||||||||||||||| || ||||||||   |||| |||||||   ||||| |||| |||||||| |    
T  47609697 ggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 47609796  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    ||||| |||| ||||||| | |||||||||||  ||||| ||| |  ||||||||||| ||||||    
T  47609797 tgcaactttggtccttttgaccaattttgaccaagtcaacgccaatttggcatgccacatgtgta 47609861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 49220533 - 49220477
Alignment:
Q  361 tcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  49220533 tcaattttgaccggtcaatgtctacgtggcttgccacgtgtgtaattatttaattaa 49220477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 52839037 - 52839213
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||  ||||| ||| ||||||| ||  |||||||   |||| ||||||||  ||| | || | |||||||| |    
T  52839037 ggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagccccat 52839136  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||| ||||||||  |||||||||||||||||| ||||| |||| | ||||||||| ||||| |||||||||    
T  52839137 tgcaaatttcatccttttggtcaattttgaccggtcaaagcctatgtggtacgccacgtgtataattgttgaattaa 52839213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 12703600 - 12703424
Alignment:
Q  241 ggctaaagtgcatttttcctccct-taatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| ||||  ||||| ||| ||| ||||| ||| |||||||||| |||||||| | |||||||||||||||||||| | || ||||||||     
T  12703600 ggctaaagtgcactttt--tccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagcccca 12703503  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  |||| || |||| |  |||||||||    |||| ||||||||||||  ||||||||||||||| | ||||||    
T  12703502 ttgcatctttggtcattttgaataattttgacttattcaacgcctacgtggcagaccacgtgtgtaattaattaattaa 12703424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 402
Target Start/End: Complemental strand, 23770505 - 23770346
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||  ||||||||||| ||||| || ||||||||| | | || ||| | ||||||||||||| |||||| |||| ||| |||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgc 23770406  T
Q  344 aattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtg 402  Q
    |  |||  |||||||  |||| |||||||  ||||| || || |||||||||||||||||    
T  23770405 atctttagtccttttggtcaactttgaccaagtcaacgcatatgtggcatgccacgtgtg 23770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 405
Target Start/End: Original strand, 8875906 - 8876071
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||  ||||||| ||  |||||  ||||||||| ||| | || ||| | |||||||||||||||||||| |||| ||||||  ||    
T  8875906 ggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaatt 8876005  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaa 405  Q
    ||||  |||| |||||||  |||||||||||    |||| |||||||||||| ||||| |||||||    
T  8876006 tgcatatttggtccttttagtcaattttgacttattcaacgcctacgtggcaggccacatgtgtaa 8876071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 263 - 406
Target Start/End: Original strand, 11670406 - 11670550
Alignment:
Q  263 cttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatc 362  Q
    ||||||||| ||||| |||||||||| | | |||||||||| |||||| |||||||| |||  | || |||| ||| ||||| ||||  ||||||| |||    
T  11670406 cttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttggtcccttatgatttagtcccattgcattttttgtccttttgatc 11670505  T
Q  363 aattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaat 406  Q
    |||||||||    |||| || ||||||||| ||||||||||||||    
T  11670506 aattttgacttattcaacgcttacgtggcaggccacgtgtgtaat 11670550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 19543781 - 19543733
Alignment:
Q  129 ggtttgggttcctctattgtcgaggtttccaaagaggttttaaatccca 177  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  19543781 ggtttgggttcctccaatgtcgaggtttccaaagaggttttaaatccca 19543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 534531 - 534594
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcc 336  Q
    ||||||||||||||||| ||||||| ||| | |||||||||||||||||||| |||| ||||||    
T  534531 aaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcc 534594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 34019241 - 34019069
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||| |||||||||  |||||| ||| ||||||||||||||||| || |||| ||| | | ||||||||||||| |||| || | ||||| | |||||    
T  34019241 taaagtacatttttcc--ccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgc 34019144  T
Q  344 aattttgatcctttttatcaattttga-ccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| |||||||  ||||||||||     |||| ||||||||| || |||||||||||||||| | ||||||    
T  34019143 atctttggtccttttggtcaattttgatttattcaacgcctacgtgacaggccacgtgtgtaattaattaattaa 34019069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 46721321 - 46721190
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||  ||| ||| ||||||||| |||| |||||  || |||| ||| | ||||||||||||| | |||| |||| ||||||||||    
T  46721321 ggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccctt 46721222  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||  |||| ||||| |  ||||||||||||    
T  46721221 tgcatatttggtccttctggtcaattttgacc 46721190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 5029783 - 5029682
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |||| |  ||| |||| ||||||||||||||||||||||||   |||| ||||||||  ||||| ||||||||||||| |    
T  5029783 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccat 5029685  T
Q  341 tgc 343  Q
    |||    
T  5029684 tgc 5029682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 47615649 - 47615591
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaag 299  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||| ||||||    
T  47615649 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 53616114 - 53616012
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||||||||||| ||||||| ||||| ||||||     | || ||| | ||||||||||||  ||||||||||||||||| |||||||    
T  53616114 taaagtgcacttttcctcccttaacttttaaacacttgtaattttaattccttatgtacaaaaactacaatttcagccccccaagaattagctcctttgc 53616015  T
Q  344 aat 346  Q
    |||    
T  53616014 aat 53616012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 408
Target Start/End: Original strand, 51347271 - 51347436
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||| || | ||||| ||| ||||| |||||||||||| |  ||| | | | |||  ||||||||| ||||| |||| ||| ||| |||||    
T  51347271 taaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaacccgtttgc 51347370  T
Q  344 aattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    || ||||||| |||| |||||| ||||||  ||||| || ||||||||| || |||||||||||||    
T  51347371 aactttgatcattttgatcaatgttgacctagtcaacgcatacgtggcaggctacgtgtgtaatta 51347436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 406
Target Start/End: Complemental strand, 10584067 - 10583976
Alignment:
Q  315 tttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaat 406  Q
    |||||||||| |||| |||||||||||||||| |||| ||||||  ||||||||||||  |||||  |||| |||||||||||||| ||||||    
T  10584067 tttggccccctaagatttagcccctttgcaatattga-ccttttggtcaattttgaccaagtcaacacctaagtggcatgccacgtatgtaat 10583976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 417
Target Start/End: Original strand, 26722601 - 26722708
Alignment:
Q  310 acaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||||||| |||| | || ||||||||||||||||  ||| ||||||   |||||||||||  ||||| ||||| |||||||||||||||||||||||    
T  26722601 acaattttggtcccctatgatttagcccctttgcaatagtga-ccttttagccaattttgacctagtcaacgcctaagtggcatgccacgtgtgtaatta 26722699  T
Q  409 ttgaattaa 417  Q
     | ||||||    
T  26722700 ctaaattaa 26722708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 417
Target Start/End: Complemental strand, 49401497 - 49401413
Alignment:
Q  333 agcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| |||||| |||| ||||||||| ||||||||||| | |||||||||||||||||   ||  | |||||||||||||||||    
T  49401497 agcccatttgcattttttatcctttttgtcaattttgactgatcaatgcctacgtggcacatcatatatgtaattattgaattaa 49401413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 370
Target Start/End: Complemental strand, 11671441 - 11671313
Alignment:
Q  241 ggctaaagtgca-tttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| ||||||| ||  ||| ||| |||||||||||||||| ||| ||||| |||| ||||||||  |||| ||||| | || ||| |||||    
T  11671441 ggctaaagtgcactttttccgcc--taactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaacccct 11671344  T
Q  340 ttgcaattttgatcctttttatcaattttga 370  Q
    || ||  |||| ||||||| |||||||||||    
T  11671343 ttacatctttggtccttttgatcaattttga 11671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 54987103 - 54986931
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||  ||| ||| ||||| |||| ||||| | | |||| ||||| |||||| ||||||| ||| | |||| ||||| |||||||    
T  54987103 taaagtgcacttttccccc--taagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgc 54987006  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgcc-acgtgtgtaattattgaattaa 417  Q
    |  ||||||| ||||   ||||||||||||||||||  ||| |||||| ||| | |||| |||||||| ||||||    
T  54987005 atctttgatcattttggccaattttgaccggtcaatttctatgtggcacgcctaggtgtttaattatttaattaa 54986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 53897173 - 53897231
Alignment:
Q  312 aattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttga 370  Q
    ||||||||||||| ||| |||||||| ||||||| ||||||||||||  ||||||||||    
T  53897173 aattttggccccctaagtattagcccatttgcaactttgatccttttggtcaattttga 53897231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 240 - 337
Target Start/End: Complemental strand, 535884 - 535787
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccc 337  Q
    ||||||||||| | |||||| ||| ||| ||| |||||||||||||||||| | | |||||||  |||||| ||||||  ||||| |||| |||||||    
T  535884 tggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 5001200 - 5001260
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagta 301  Q
    |||||||||||| |||||||||| ||  ||| |||| ||||||||||||||| ||||||||    
T  5001200 ggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagta 5001260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 6171223 - 6171168
Alignment:
Q  362 caattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||   ||||||||||| ||||| ||||| |||||||||||||||||||    
T  6171223 caattttgactaatcaatgcctacttggcacgccacatgtgtaattattgaattaa 6171168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 28263212 - 28263129
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    |||||||||||| |||||| ||| ||| ||||||||  |||| ||||||||| || | ||||  |||| |||||||||||||||    
T  28263212 ggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 28263129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 417
Target Start/End: Original strand, 32829829 - 32829915
Alignment:
Q  331 ttagcccctttgcaattttgatcctttttatcaattttgaccgg-tcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||   ||| |||||| ||||||||||||||| ||||   ||| ||||||||||| ||||||| ||||||||||||    
T  32829829 ttagcccctttgcaaaagtga-ccttttgatcaattttgaccgggtcaaccactatgtggcatgccatgtgtgtatttattgaattaa 32829915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 51470555 - 51470425
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| | |||| |||| || ||| ||||||||||||||| |  | ||||||||   |||| ||||||| |  |||| |||| ||||| || |    
T  51470555 ggctaaagtgcactcttcccccct-aactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagctccat 51470457  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| |||||||||||||    
T  51470456 tgcaactttggtccttttgatcaattttgacc 51470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 417
Target Start/End: Complemental strand, 26723889 - 26723786
Alignment:
Q  314 ttttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaattattga 412  Q
    |||||| |||| | || ||||||||||||||||  ||| ||||||  ||||||||||||  ||||| || || |||||||||||| |||||||||| | |    
T  26723889 ttttggtcccctatgatttagcccctttgcaatagtga-ccttttagtcaattttgacctagtcaacgcttaagtggcatgccacatgtgtaattactaa 26723791  T
Q  413 attaa 417  Q
    |||||    
T  26723790 attaa 26723786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 53901488 - 53901391
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||| ||| ||||| ||||||||||| |  | |||||| | |||||||||| ||||||||| ||  ||||||||||    
T  53901488 tggctaaagtgcacttttccccc--taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccctaaatattagcccct 53901391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 7e-57; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 40255773 - 40255597
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||||| |||| ||| |||| |    
T  40255773 ggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccccat 40255674  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  40255673 tgcaattttaatctttttgatcaattttgaccggtcaatgcctacgtggcgtgccacgtgtgtaattatttaattaa 40255597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 28538676 - 28538852
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||||||||||||||| || | |||||| | ||||||||||||| |||||| |||| ||||||||||    
T  28538676 ggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccctt 28538775  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  28538776 tgcaactttgatcctttttgtcaattttgaccggtcaatgtctatgtggcatgccacgtgtgtaattaatgaattaa 28538852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 36486589 - 36486413
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||| ||||||| |||| | ||| ||| ||||||||||||||||||||| || |||||||| | ||||||||||||||| |||| |||| |||| |||||    
T  36486589 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctt 36486490  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  36486489 tgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattaataaattaa 36486413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 28539917 - 28539745
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||||||||||| |||| || ||||||||||||||||||||| ||  ||||||| | ||||||||||||||| |||| |||| |||| ||||||||    
T  28539917 taaagtgcatttttcccccct-aacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgc 28539819  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  28539818 aactttgatcctttttgccaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattaataaattaa 28539745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 33160387 - 33160212
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||  |||| |||| ||| |    
T  33160387 ggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttag-cccat 33160289  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||| ||||||||   |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  33160288 tgcaactttaatccttttagccaattttgaccggtcaatgcctacgtggcacgccacatgtgtaattattgaattaa 33160212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 243 - 417
Target Start/End: Original strand, 36485302 - 36485476
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    ||||||||||||||||| ||| ||| ||| |||||||| |||||||| |||| |||||| | |||||| ||||||||||||| |||| ||| ||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttg 36485401  T
Q  343 caattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||| ||||||| ||||| ||||||||||||||||||||||||  ||||||||||||  |||||||| ||||||||    
T  36485402 caactttgatcatttttgtcaattttgaccggtcaatgcctatatggcatgccacggatgtaattaatgaattaa 36485476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 18487003 - 18486826
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  18487003 ggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccctt 18486904  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  18486903 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 18486826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 24332916 - 24333089
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||| | ||||||| ||| |||||||||||||||||||| | || ||| | |||||||||||||| ||| | |||| ||| |||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  24333016 atctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtgtaattattaaattaa 24333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 25523069 - 25523246
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||| ||| |||||||| | |||||||||||||| ||||| |||| ||||||||||    
T  25523069 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccctt 25523168  T
Q  341 tgcaattttgatcctttttatcaattttga-ccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||||||||||| |||||||||||     |||| ||||||||||| ||||||||||||||||| | ||||||    
T  25523169 tgcatctttgatccttttgatcaattttgatttattcaacgcctacgtggcctgccacgtgtgtaattaattaattaa 25523246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 16650956 - 16650779
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||| |||||| |||  ||||||| ||    
T  16650956 ggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccatt 16650857  T
Q  341 tgcaattttgatcctttttatcaattttga-ccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||| |  ||||| || |  ||||||||||||||||||||||| ||||||||    
T  16650856 tgcatctttggtccttttggtcaattttgatcaagtcaacgcatgtgtggcatgccacgtgtgtaattaatgaattaa 16650779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 1797397 - 1797222
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| |||||| | || |||| |||||||||||||||||||||||  | ||   | | ||||||||||||||| |||  |||| ||||||||||    
T  1797397 ggctaaagtggattttttc-cctttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctt 1797299  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| |||||| | |||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  1797298 tgcaactttgattccttttttcaattttgaccggtcaatgcctatgtggcacgccacatgtgtaattattgaattaa 1797222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 20216861 - 20216687
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||| ||  ||||  || | ||||||||||||||||||||||||||||||||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||  |  ||||||   ||||||||||| ||||||| |||||  ||||| | |||||||||||||||| ||||||    
T  20216761 aatagtagtcctttacgtcaattttgactcggtcaacgcctatatggcaggtcacgtgtgtaattattaaattaa 20216687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 19752912 - 19753088
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |||| || ||| |||||||||||||||||||| |||||||| | |||||||||||||||||||| | || |||||||| |    
T  19752912 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 19753010  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  19753011 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 19753088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 240 - 412
Target Start/End: Complemental strand, 22940724 - 22940552
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||||||| ||| |||||||||||||||||||| |||||||| | ||| ||||||||| | |||| || | |||||||||    
T  22940724 tggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaatttt-gacccctaaaatttagcccct 22940626  T
Q  340 ttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattga 412  Q
    || ||  ||| ||||||||  ||||||||||||  ||||| ||||| |||||||||||||||| ||||||||||    
T  22940625 tttcatcttttatccttttggtcaattttgaccaagtcaacgcctaagtggcatgccacgtgtataattattga 22940552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 417
Target Start/End: Original strand, 1015492 - 1015660
Alignment:
Q  249 tgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattt 348  Q
    |||| |||||||||| ||| ||||||||| || ||||||||||| |||  ||| | || ||||||||||  ||||| ||||||||| |||||||||  ||    
T  1015492 tgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattagtccctttgcatatt 1015591  T
Q  349 tgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || |||||||   |||||||||||  |||||||||||||| |||||||| |||||||||||||||||||    
T  1015592 tggtccttttccccaattttgaccaatcaatgcctacgtgacatgccacatgtgtaattattgaattaa 1015660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 20214195 - 20214372
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||||||| ||| |||||||||||||||| ||   ||| ||| | ||||||||||||||||||| ||||||||| ||| |    
T  20214195 tggctaaagtgcacttttcc-cccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatcccat 20214293  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||  |  |||||| | ||||||||||| ||||||| |||||  ||||| |||||||||||||||||| ||||||    
T  20214294 ttgcaatagtagtcctttatgtcaattttgactcggtcaacgcctatatggcaggccacgtgtgtaattattaaattaa 20214372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 1796053 - 1796231
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||||||||||| ||| ||| ||| |||||||||||| ||||||| |||||||| | ||||||||||||||  ||||||||||||| ||| |    
T  1796053 tggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttgatcccccaagaattaacccat 1796152  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaa-ttattgaattaa 417  Q
    |||||||  |  ||||||   ||||||||||| | ||||| |||||  ||||| ||||| ||||||| ||||||||||||    
T  1796153 ttgcaatagtagtcctttagttcaattttgactcagtcaacgcctatatggca-gccacatgtgtaatttattgaattaa 1796231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 19754232 - 19754054
Alignment:
Q  241 ggctaaagtgcatttttc-ctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||||||||  | ||| ||| ||| |||||||||||||||||||| ||||| || | |||||||||||||||||||| | || ||||||||     
T  19754232 ggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccca 19754133  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  |||| ||||||| | ||||||||||    |||| |||||||||| | |||||||||||||||| | ||||||    
T  19754132 ttgcatctttggtccttttgaacaattttgacttattcaacgcctacgtggaaggccacgtgtgtaattaattaattaa 19754054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 1016961 - 1016789
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||| ||||||   ||| ||||||||||||| ||| |||||||| || ||| ||| | |||||||||||||| | ||  |||||||||| |||||||    
T  1016961 taaagtgtatttttttccccctaatttttaaaaaattgtaattttggtcttctatgtacaaaaactacaattttgactcct-aagaattagctcctttgc 1016863  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |   ||| || ||||   ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  1016862 atagttggtcattttccccaattttgatcggtcaatgcctacgtagcatgtcacgtgtgtaattattgaattaa 1016789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 25055412 - 25055580
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| ||   ||||||||||||  | |||| ||||| |||||||||||||||||||| |||| ||||||| ||    
T  25055412 ggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccatt 25055511  T
Q  341 tgcaattttgatcctttttatcaattttga-ccggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| ||||||| ||||||||||| |  ||||||||  |  ||||||||||||||||||||||    
T  25055512 tgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtgtaatta 25055580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 18485138 - 18485322
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaatttt-------ggccccccaagaatta 333  Q
    |||||||||||| |||| | ||  ||| ||| |||||||||||||||||||| |||||||||  |||| ||||||||       ||||||| |||| |||    
T  18485138 ggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagattta 18485237  T
Q  334 gcccctttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||  ||||||||||||  | |||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  18485238 gcccctttgcatctttgatccttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 18485322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 244 - 408
Target Start/End: Original strand, 42195137 - 42195300
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||| ||| ||||| |||| ||||||||| |||| ||| | || |||||||||||| |||| |||| |||||||||||||    
T  42195137 taaagtgcacttttcc-cccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgc 42195234  T
Q  344 aattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |  |||| |||||||  ||||||||||||  ||||| ||  |  ||||||||||||||||||||||    
T  42195235 atctttggtccttttggtcaattttgaccaagtcaacgctgatttggcatgccacgtgtgtaatta 42195300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 282 - 417
Target Start/End: Complemental strand, 25524158 - 25524022
Alignment:
Q  282 caattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgac-cggtcaatg 380  Q
    |||||||||||||||||||| | |||||| ||||||| ||||| |||| ||||||||||||||  |||  |||||||  |||||||||||    |||| |    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattttgacttattcaacg 25524059  T
Q  381 cctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||  ||||||||||||||| | ||||||    
T  25524058 cctacgtggcagaccacgtgtgtaattaattaattaa 25524022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 5778937 - 5778806
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||| ||| ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  5778937 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5778838  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | |||||||||||    
T  5778837 tgcaactttggtccttttgaccaattttgacc 5778806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 336
Target Start/End: Complemental strand, 25056486 - 25056387
Alignment:
Q  237 atatggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcc 336  Q
    |||||||||||||||| |||||| | | ||| ||| ||||||||||||||||| || |||||||||  |||||||||||||| ||||| |||| ||||||    
T  25056486 atatggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 417
Target Start/End: Original strand, 5961476 - 5961582
Alignment:
Q  311 caattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    ||||||| |||||| || | ||| ||||||||||  |||||||||||| | || |||| ||||||||||| |||| || |||||||||||||| ||||||    
T  5961476 caattttagccccctaaaatttaacccctttgcatctttgatccttttgaccatttttaaccggtcaatgtctacatgacatgccacgtgtgttattatt 5961575  T
Q  411 gaattaa 417  Q
     ||||||    
T  5961576 taattaa 5961582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 415
Target Start/End: Original strand, 16650045 - 16650167
Alignment:
Q  294 cctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcat 392  Q
    |||||||| | |||||||||||||| ||| | |||| ||| ||||||||||  |||| |||||||  ||||||||||||  |||||||| |  |||||||    
T  16650045 cctaagtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgaccaagtcaatgcatgtgtggcat 16650144  T
Q  393 gccacgtgtgtaattattgaatt 415  Q
    ||||||||||||| || ||||||    
T  16650145 gccacgtgtgtaaataatgaatt 16650167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 25524229 - 25524148
Alignment:
Q  241 ggctaaagtgcatttttcctccct-taatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcc 321  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| |||||||||| |||||||| | |||||||||||||||||    
T  25524229 ggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcc 25524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 417
Target Start/End: Complemental strand, 14061628 - 14061537
Alignment:
Q  326 aagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||| ||||| | |||||| ||||||||||||| |  |||||| || |||||| ||||| |||||||||||||| | |||||||||||||||    
T  14061628 aagatttagctcatttgcatttttgatccttttgacaaatttttactggtcaacgcctatgtggcatgccacgtatataattattgaattaa 14061537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 2686474 - 2686372
Alignment:
Q  269 ttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaatttt 368  Q
    |||||||||||||||||||||  ||| |||||| | |||||| |||||||| |||| | || |||||| | |||||  |||| ||||||| |||||||||    
T  2686474 ttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgatttagcctcattgcatctttggtccttttgatcaatttt 2686375  T
Q  369 gac 371  Q
    |||    
T  2686374 gac 2686372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 20424808 - 20424952
Alignment:
Q  32 accaacaaagtagtaaatttcttgatatgcacattgttggtccctggagtgtccc-gtagcatacttggactatattcaagaaccaccatcttggtgtgg 130  Q
    |||||||||| |  ||||||| |||||||| ||| |||||| | ||||||| | | ||  || |||| ||||||| |||||| || |||||||||| |||    
T  20424808 accaacaaagcaacaaatttcctgatatgcgcatagttggttcttggagtgacgctgtgacagacttagactataatcaagatcccccatcttggtatgg 20424907  T
Q  131 tttgggttcctctattgtcgaggtttccaaagaggttttaaatcc 175  Q
    ||| ||||| || | ||||  |||||| |||||||||||||||||    
T  20424908 tttaggttcttccaatgtcatggtttctaaagaggttttaaatcc 20424952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 273 - 372
Target Start/End: Complemental strand, 5730931 - 5730832
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||||| ||||||||||| ||||||||   |||| ||||||| | ||||| |||| ||| |||| |||||| |||| | ||||| |||||||||||||    
T  5730931 aaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagatttaaccccattgcaactttggttcttttgatcaattttgacc 5730832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 7311622 - 7311685
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcc 336  Q
    ||||||||||||| ||||||||| ||||| | ||||||||||||| |||||| |||| ||||||    
T  7311622 aaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagcc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 5777901 - 5778016
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||  ||| ||| ||||||||||||||||| || ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  5777901 ggctaaagtgcactttcccccc--taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5777998  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||| |||| |||||||    
T  5777999 tgcaactttggtcctttt 5778016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 21835083 - 21835157
Alignment:
Q  284 attttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttt 358  Q
    |||||| || |||| ||| | |||||||||||||| ||||| |||| ||| ||||||||||| ||||||||||||    
T  21835083 attttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctttgcaactttgatcctttt 21835157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 33158098 - 33158180
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccc 323  Q
    |||||||||||||||||   ||| ||| ||| ||||||||||||||||| |  |||||||| | |||||||||||||| ||||    
T  33158098 ggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgacccc 33158180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 5730441 - 5730502
Alignment:
Q  241 ggctaaagtgcatttttcctccc-ttaatttttaaaaacttgcaattttggcctcctaagta 301  Q
    |||||||||||| |||||| ||| |||| ||| ||||||||||||||||||| |||||||||    
T  5730441 ggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagta 5730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 564 - 617
Target Start/End: Original strand, 32234222 - 32234275
Alignment:
Q  564 ttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||||||||||| |||||||| ||||||||||||| || |||||||||| ||||    
T  32234222 ttcttcttcttcaattcaaactcaaactcatgaatctttatcatcttcaactca 32234275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 24468601 - 24468509
Alignment:
Q  328 gaattagcccctttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaatt 419  Q
    |||||||||| ||| |||| ||  ||||||| |||||||||||| |  ||| ||| || ||| ||||||||||||||||||||| ||||||||    
T  24468601 gaattagcccatttacaatattagtccttttaatcaattttgactcaatcattgcttatgtgtcatgccacgtgtgtaattattcaattaatt 24468509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 42196301 - 42196133
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||| ||| ||||||||| |||  | |||||||  ||| ||| | |||||||| |||| | |||| |||| ||||||| ||    
T  42196301 ggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagcccatt 42196202  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| |||||||  ||||||||||||  ||||| ||  |  ||||||||||| ||||||||||    
T  42196201 tgcatctttggtccttttggtcaattttgaccaagtcaacgctgatttggcatgccacatgtgtaatta 42196133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 12402368 - 12402285
Alignment:
Q  92 atacttggactatattcaagaaccaccatcttggtgtggtttgggttcctctattgtcgaggtttccaaagaggttttaaatcc 175  Q
    ||||||||| ||||||||||| || || ||||||| ||||||| |||| || | ||||  |||||| ||||| |||||||||||    
T  12402368 atacttggattatattcaagatcccccgtcttggtatggtttgagttcttccaatgtcatggtttctaaagatgttttaaatcc 12402285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 41663827 - 41663768
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaag 299  Q
    |||||||||||||||||||  || |||| ||||||||| |||| ||||||||| ||||||    
T  41663827 tggctaaagtgcatttttcaccctttaagttttaaaaagttgcgattttggccccctaag 41663768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 372
Target Start/End: Original strand, 2186774 - 2186901
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||||||||| | |||| || ||| ||||| |||||||||||| || ||| ||| | |||||||||||||   |||| |||| ||||||  ||| |    
T  2186774 taaagtgcattttttccccct-aagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttac 2186872  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    |  |||| |||||||  ||||||||||||    
T  2186873 atctttggtccttttggtcaattttgacc 2186901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 10784592 - 10784770
Alignment:
Q  241 ggctaaagtgcatttttcc-tcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||  || |||||||||| |||||||||||||||||||| |||| |||||||||    
T  10784592 ggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccct 10784691  T
Q  340 ttgcaattttgatcc-tttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||| ||||||    
T  10784692 ttgcaactttgatccttttttatcaattttgaccggttaatgcctacggggcacgccatgtgtgtaattattaaattaa 10784770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 246 - 417
Target Start/End: Original strand, 29473082 - 29473253
Alignment:
Q  246 aagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaa 345  Q
    ||||||| |||||| ||||||| ||||||||| ||||||||||||   |||| | | | |||  ||||||||||||| ||||||||| ||||||||||||    
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctccaagaattggcccctttgcaa 29473181  T
Q  346 ttttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  29473182 ttttgatcctttttgtcaatttttaccggtcaatgcctacgtggcatgccacatgtgtaattattgaattaa 29473253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 241 - 415
Target Start/End: Original strand, 14822360 - 14822534
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||| |||||| |||||  ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||| | | |    
T  14822360 ggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttagtctcat 14822459  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    ||||| ||| |||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  14822460 tgcaactttaatccttttaatctattttgaccggtcaatgcttacgtggcacgccacgtgtgtaattattaaatt 14822534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 1829701 - 1829528
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||||   ||| ||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||| |||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgc 1829602  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| || ||||  |||||||||||||||||||||||||||||||  |||||||||||||| || ||||||    
T  1829601 atctttggtcattttggtcaattttgaccggtcaatgcctacgtggcacaccacgtgtgtaattgttaaattaa 1829528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 16704598 - 16704422
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||| || |||||||| | ||||||||||||||  ||   |||| |||||| |||    
T  16704598 ggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctctt 16704499  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| | ||||||||||| ||||||||||  ||||||||||||||||| ||||||||| |||||||| ||||||||    
T  16704498 tgcaactatgatcctttttgtcaattttgattggtcaatgcctacgtggtatgccacgtatgtaattaatgaattaa 16704422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 241 - 415
Target Start/End: Complemental strand, 14823677 - 14823502
Alignment:
Q  241 ggctaaagtgca-tttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| ||||| | ||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||||||||||| |||| ||||  ||     
T  14823677 ggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttagaaccg 14823578  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    ||||||  || || |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  14823577 ttgcaaccttaattcttttggtcaattttgaccggtcaatgcctacgtggcacgccacgtgtgtaattattaaatt 14823502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 273 - 417
Target Start/End: Complemental strand, 26575123 - 26574979
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    ||||||||||||||||  || | |||||| | |||||||||||||||||||| |||| ||| | ||||||||| |||||||||||||  |||||||||||    
T  26575123 aaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgcaactttgatcctttttgccaattttgacc 26575024  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||| |||||||||||||||| || ||||||| ||||||||    
T  26575023 ggtcaatgtctacgtggcatgccacatgcgtaattaatgaattaa 26574979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 7316395 - 7316218
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||||| ||||| ||| ||||| ||||||||||||||  |||| ||||||||||    
T  7316395 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccctt 7316296  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  | || |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  7316295 tgcatctatggtccttttggtcaattttgacttattcaacgcctacgtggcaagccacgtgtgtaattaattaattaa 7316218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 10785986 - 10785838
Alignment:
Q  269 ttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaatttt 368  Q
    ||||||||| ||||||||||  || |||||||| | |||||||||||||  ||||  |||| ||||||||||||||| |||||||||||||| |||||||    
T  10785986 ttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatcctttttaccaatttt 10785887  T
Q  369 gaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||  |||||||| ||| ||||| |||||||||||||||||| ||||||    
T  10785886 gactagtcaatgcatacatggcacgccacgtgtgtaattattaaattaa 10785838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 7314879 - 7315056
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| |||||||||  |||| ||||||||| ||||| |||| |||||||||    
T  7314879 tggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtatcaaaacaacaattttgaccccctaagatttagcccct 7314977  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  |||| || ||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  7314978 ttgcatctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 7315056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 8659265 - 8659396
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  8659265 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 8659364  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | |||||||||||    
T  8659365 tgcaactttggtccttttgaccaattttgacc 8659396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 27437828 - 27437959
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||  ||||||| ||| ||||| |||||||||||||| ||||   ||| |||||||||||||| ||||| |||| ||||| ||||    
T  27437828 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 27437927  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| |||||||   |||||||||||    
T  27437928 tgcaactttggtccttttggccaattttgacc 27437959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 34834677 - 34834549
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||||||  || ||| ||| |||||||||||||||||  |||||||||||  |||| ||||||| | ||||| |||| |||||||| ||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 34834578  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    || |||| ||||||| | |||||||||||    
T  34834577 aactttggtccttttgaccaattttgacc 34834549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 388
Target Start/End: Original strand, 26574619 - 26574765
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||  ||| ||| |||||||||||||||||  |  ||||||| | |||||||| |||||  |||  |||| ||||||||||    
T  26574619 ggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca-ttttgatcccttaagatttagcccctt 26574717  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtg 388  Q
    ||||| ||||||| ||||| ||||||||||||| | ||||||||||||    
T  26574718 tgcaactttgatcttttttgtcaattttgaccgattaatgcctacgtg 26574765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 372
Target Start/End: Original strand, 5658759 - 5658887
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||||||||||| ||||||| ||||||||| ||  |||||| |   |||| ||| | ||||||||||||||  |||  |||| ||||||| |||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagcccatttgc 5658858  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    || ||||||||||||  ||||||||||||    
T  5658859 aactttgatccttttggtcaattttgacc 5658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 8660304 - 8660174
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| | | ||| ||| ||||||||||||||||| || ||||||||   |||| ||||||| | ||||| |||| ||||| || |    
T  8660304 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacc-cctaagtaccaaaaccacaatttagcccccctaagatttagctccat 8660206  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||||||||||| | |||||||||||    
T  8660205 tgcaactttgatccttttgaccaattttgacc 8660174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 408
Target Start/End: Complemental strand, 12382811 - 12382644
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||||| ||  ||||||||||||| ||| ||||||| || |||||||||  |||||| |||||||  |||| |||| ||| ||| |||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  342 gcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||  |||| |||||||    |||||||||  |||||| || ||  ||||||||||||||||||||||    
T  12382711 gcatctttggtccttttagctaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 12382644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 8821873 - 8821990
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| ||||| || |    
T  8821873 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctccat 8821972  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||| |||| |||||||    
T  8821973 tgcaactttggtcctttt 8821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 3721612 - 3721743
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| ||||||||||||||||| || ||||||||   |||| | ||||| | ||||  |||| |||||||| |    
T  3721612 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagccccat 3721711  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | |||||||||||    
T  3721712 tgcaactttggtccttttgaccaattttgacc 3721743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 8822895 - 8822777
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| ||||||  | |||| ||| ||||||||||||||||| || ||||||||   |||| ||||||| | ||||| |||| |||||||      
T  8822895 tggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccaa 8822796  T
Q  340 ttgcaattttgatcctttt 358  Q
    |||||| |||| |||||||    
T  8822795 ttgcaactttggtcctttt 8822777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 260 - 417
Target Start/End: Complemental strand, 26949264 - 26949110
Alignment:
Q  260 tcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatccttttt 359  Q
    |||||||| ||| ||||| ||||||||||| ||  ||||||||| |||||||||||||   |  | |||| ||| ||||||||||  |||  |  ||||     
T  26949264 tcccttaactttcaaaaa-ttgcaattttgccc--ctaagtataaaaactacaattttaatcttctaagatttaacccctttgcatctttagtgtttttg 26949168  T
Q  360 atcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||| |||||||||| | ||||| ||||| |||||||||||| ||||||    
T  26949167 atcaattttgaccagtcaatgccttcatggcacgccacatgtgtaattattaaattaa 26949110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 27322168 - 27322067
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |||| |  ||| |||| ||||||||||||||| ||||||||   |||| ||||||||  ||||| |||||||||||||||    
T  27322168 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctt 27322070  T
Q  341 tgc 343  Q
    |||    
T  27322069 tgc 27322067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 1828739 - 1828789
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggc 291  Q
    ||||||||||||||||| | || |||||||||||||| |||||||||||||    
T  1828739 ggctaaagtgcattttttcccctttaatttttaaaaatttgcaattttggc 1828789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 16703569 - 16703734
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||  ||| |||||||||||||||||  | | ||| || | ||||||||||||| |||||| || | ||| |||||    
T  16703569 tggctaaagtgcacttttccccc--tatctttcaaaaacttgcaattttgatc-cataaatacaaaaactacaattttagccccctaaaatttaacccct 16703665  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  ||| ||||||||||||||         |||||||||| | |||||||||| ||||||||||||||| ||||||||    
T  16703666 tcccaactttgatccttttta---------accggtcaatacttacgtggcattccacgtgtgtaattaatgaattaa 16703734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 17496793 - 17496928
Alignment:
Q  241 ggctaaagtgcatttttcctcc----cttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccccc-aagaattagc 335  Q
    ||||||||||||||||||| ||    | ||| ||| |||||||| |||||||  ||  ||||||| | ||||| ||||||||||||||| |||| ||| |    
T  17496793 ggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaac 17496892  T
Q  336 ccctttgcaattttgatcctttttatcaattttgac 371  Q
    | |||||||  |||| ||||||| ||||||||||||    
T  17496893 ctctttgcatctttggtccttttgatcaattttgac 17496928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 26717144 - 26717046
Alignment:
Q  311 caattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||||| ||||  |||| ||||| | ||||||| |||||||||||| |||||||||||||  |||||||| ||  ||||||||||| | ||||||||    
T  26717144 caattttgaccccttaagatttagctcttttgcaactttgatccttttgatcaattttgaccaagtcaatgcttaattggcatgccacctatgtaatta 26717046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 358
Target Start/End: Complemental strand, 3333095 - 3333010
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttt 358  Q
    ||||| |||| ||||||||| |||| ||| | |||||||||||||  ||| | || | ||||||||||||||| ||||||||||||    
T  3333095 aaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccctttgcaactttgatcctttt 3333010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 12350832 - 12350898
Alignment:
Q  275 aaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    ||||||||||||||| || |||| ||||| |||||||||||||  ||||| |||| ||||||||||||    
T  12350832 aaacttgcaattttgacc-cctatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 27448014 - 27447963
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcc 292  Q
    |||||||||||| |||||| ||||||| ||||||||| || |||||||||||    
T  27448014 ggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggcc 27447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 13345723 - 13345682
Alignment:
Q  374 gtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    |||||||| || |||||||||||| |||||||||||||||||    
T  13345723 gtcaatgcatatgtggcatgccacatgtgtaattattgaatt 13345682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 6842384 - 6842308
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaatttt 317  Q
    |||||||||||| |||||| ||  ||| ||| ||||| |||||||||||||| |||| ||  | |||||||||||||    
T  6842384 ggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 31599789 - 31599965
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||| ||||||| |||| | ||| ||| ||||||||||||||||||||| || |||||||| | ||||||||||||||| |||| |||| ||||||||||    
T  31599789 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctt 31599888  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31599889 tgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattaataaattaa 31599965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 240 - 417
Target Start/End: Complemental strand, 31601087 - 31600910
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||| | ||  ||| ||||||||||||||||||||| || |||||||| | |||||||||||||| ||||  |||| ||||||| |    
T  31601087 tggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccat 31600988  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  31600987 ttgcaactttgatcctttttgtcaattttgaccggtcaatgcctatgtggcatgccacgtgtgtaattaatgaattaa 31600910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 35935631 - 35935458
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||| || ||||||| ||||||||| |||||||||| ||| |||||||| | |||||||||||||||||||| |||| |||||| | ||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcctcattgc 35935532  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || ||| ||||||||   ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  35935531 aactttaatccttttggccaattttgaccggtcaatgcctatgtggcacgccacgtgtataattattgaattaa 35935458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 52491708 - 52491534
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||||| ||||||| ||| |||||||||||||||||| |  |||| || |||||||||||||||||||||| || | |||||||| |    
T  52491708 ggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccccat 52491609  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||| ||||||||  ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  52491608 tgcaactttaatccttttggtcaattttgacaggtcaatgcctacgtggc--gccacgtgtgtaattattgaattaa 52491534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 8758935 - 8758766
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||| |||| |||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||  |||| ||||| || ||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgc 8758836  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| ||||||||  |||||||||| || ||||||||||||||    |||||||||||||||||| ||||||    
T  8758835 aattttaatccttttggtcaattttgatcgatcaatgcctacgtg----gccacgtgtgtaattatttaattaa 8758766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 10448361 - 10448185
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||  |||||| ||| ||| ||||| |||| ||||| ||| |||| ||| | |||||||||||||||||| | ||||  |||||||||    
T  10448361 ggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctt 10448262  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10448261 tgcatctttggtccttttggccaattttgaccagtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 10448185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 1290299 - 1290131
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||| |||||||||||||||  ||||||| | ||||||||||||| |||||| |||| ||| ||||||    
T  1290299 ggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccctt 1290200  T
Q  341 tgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| |||||||  ||||||||||||| ||||| ||||| |||||||||||| ||||||||||    
T  1290199 tgcatctttggtccttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtgtaatta 1290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 373
Target Start/End: Original strand, 1963196 - 1963328
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| ||||| ||||||||||||||||||| ||| | ||||||||||||| |||||| |||||||||||||||    
T  1963196 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccctt 1963295  T
Q  341 tgcaattttgatcctttttatcaattttgaccg 373  Q
    ||||||  || ||||||||| ||||||||||||    
T  1963296 tgcaatagtggtcctttttagcaattttgaccg 1963328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 35934347 - 35934518
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||  ||| ||| ||||||||| |||||||| | |||||||| ||||| || ||||||||||||  |||| |||||||| ||||    
T  35934347 taaagtgcacttttccccc--taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgc 35934444  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || ||| || |||||  |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||    
T  35934445 aactttaattcttttggtcaattttgaccagtcaatgcctacgtggcatgtcacgtgtgtaattaatgaattaa 35934518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 17388311 - 17388135
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |||| || ||| |||||||||||||||||| | | |||||| | ||||||||||||||||||||||||||||||||||||    
T  17388311 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagcccctt 17388213  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    | ||||  |  ||||||   |||||||||||  |||||| |||||  ||||| |||||||||||||||||||||||||    
T  17388212 tacaatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcaggccacgtgtgtaattattgaattaa 17388135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 390
Target Start/End: Original strand, 8757675 - 8757822
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||||||| ||| |||||||| ||||||| ||| |||||||| ||||||||||||||||| |||  |||| |||||||| |    
T  8757675 ggctaaagtgcactttttc-cccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccat 8757773  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggc 390  Q
    ||||||||| ||||||||  |||||||||| |||||||||||||||||||    
T  8757774 tgcaattttaatccttttggtcaattttga-cggtcaatgcctacgtggc 8757822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 241 - 416
Target Start/End: Original strand, 10447006 - 10447182
Alignment:
Q  241 ggctaaagtgcatttttcctcc-cttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| |||||| || ||||| ||| ||||| |||||||||| ||| |||| ||| | |||| ||||||||  ||||| |||| |||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatta 416  Q
    |||||  |||| |||||||    |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  10447106 ttgcatctttggtccttttggctaattttaaccagtcaatgcctacgtggcacgccacgtgtgtaattattgaatta 10447182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 240 - 417
Target Start/End: Complemental strand, 50909775 - 50909597
Alignment:
Q  240 tggctaaagtgca-tttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccccc-aagaattagccc 337  Q
    ||||||||||||| ||||||| |||| || ||||||||| |||| |||||| |  |||| ||||| |||||||||||||| |||||  |||| |||||||    
T  50909775 tggctaaagtgcactttttccaccct-aagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagccc 50909677  T
Q  338 ctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||  |||| ||||||| ||||||||||||||||||||| ||| ||| ||||| ||| ||||||||||| ||||||    
T  50909676 ctttgcatctttggtccttttgatcaattttgaccggtcaatgtctatgtgacatgcaacgcgtgtaattatttaattaa 50909597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 17382993 - 17383169
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||||| |||| ||| ||| |||||||||||||||||| | | |||||| | ||||||||||||||||||||||||||||| ||||||    
T  17382993 ggctaaagtgcacttttc-tcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcccctt 17383091  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |  ||||||   |||||||||||  |||||| |||||  |||||  |||| |||||||||||||||||||    
T  17383092 tgcaatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcagaccacctgtgtaattattgaattaa 17383169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 1835203 - 1835035
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||||||  || ||| ||| ||||||||||||||||| || |||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  1835203 ggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 1835104  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| |||||||   ||||||||||  |||||| || ||  ||||||||||||||||||||||    
T  1835103 tgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 1835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 12129626 - 12129800
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| | ||||| ||| |||||||||||||||||||| | |||||| | |||||||||||||| ||||  |||| ||||||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| || |||| ||||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  12129726 atctttggtcattttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 12129800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 21539159 - 21539069
Alignment:
Q  254 ttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgca 344  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||| ||||| ||||||||    
T  21539159 ttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgca 21539069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 408
Target Start/End: Complemental strand, 1964543 - 1964374
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||||||| ||||||||| || ||||||||||| |||| | | | ||||||||||||||| |||  |||||||| |||||    
T  1964543 tggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccct 1964444  T
Q  340 ttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||| ||  || ||||||||| |||||||||||  ||||| ||  |  ||||||||||||||||||||||    
T  1964443 ttgcgatagtggtcctttttagcaattttgaccaagtcaacgctgatttggcatgccacgtgtgtaatta 1964374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 372
Target Start/End: Complemental strand, 19750673 - 19750545
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    |||||||||| |||||| |||| || |||||||||||||||||||||||| |||||||| | |||||||||||||  ||||| |||| |||||||| |||    
T  19750673 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattg 19750575  T
Q  343 caattttgatcctttttatcaattttgacc 372  Q
    ||| ||||||||||||  ||| ||||||||    
T  19750574 caaatttgatccttttggtcacttttgacc 19750545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 372
Target Start/End: Original strand, 19789133 - 19789261
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    |||||||||| |||||| |||| || |||||||||||||||||||||||| |||||||| | |||||||||||||  ||||| |||| |||||||| |||    
T  19789133 ctaaagtgcacttttcccccct-aacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattg 19789231  T
Q  343 caattttgatcctttttatcaattttgacc 372  Q
    ||| ||||||||||||  ||| ||||||||    
T  19789232 caaatttgatccttttggtcacttttgacc 19789261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 240 - 372
Target Start/End: Complemental strand, 10471490 - 10471358
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||||||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| ||||||||     
T  10471490 tggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 10471391  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||| |||| ||||||| | |||||||||||    
T  10471390 ttgcaactttggtccttttgaccaattttgacc 10471358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 1834118 - 1834288
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccccc-aagaattagcccc 338  Q
    ||||||||||||| |||||| ||  ||| ||| |||||||| |||||||| || |||| ||||| ||||||||||||||||||||| |||| |||||||     
T  1834118 tggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagccca 1834217  T
Q  339 tttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||||  |||| |||||||  ||||||||||||   |||||||  |  ||||||||||||||||||||||    
T  1834218 tttgcatctttggtccttttggtcaattttgaccaaatcaatgctgatttggcatgccacgtgtgtaatta 1834288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 21178060 - 21178172
Alignment:
Q  305 aaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    |||||||||||||| ||||| || | ||||||| ||||||| ||||||| |||||  |||||||||| |||||||||||| |||||| |||||||||| |    
T  21178060 aaactacaattttgaccccctaaaatttagcccttttgcaactttgatcatttttgccaattttgactggtcaatgcctatgtggcacgccacgtgtgca 21178159  T
Q  405 attattgaattaa 417  Q
    |||| ||||||||    
T  21178160 attaatgaattaa 21178172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 372
Target Start/End: Original strand, 25684929 - 25685065
Alignment:
Q  236 aatatggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagc 335  Q
    ||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||| ||  |||||||   |||| ||||||| | ||||| |||| |||||    
T  25684929 aatatggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagc 25685028  T
Q  336 ccctttgcaattttgatcctttttatcaattttgacc 372  Q
    ||| |||||| |||| ||||||| |||||||||||||    
T  25685029 cccattgcaactttggtccttttgatcaattttgacc 25685065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 416
Target Start/End: Complemental strand, 13509459 - 13509284
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||||| |||| || ||||||||| |||||||||||||| || ||||||  ||||||||||||||  |||| |||| ||||||||||    
T  13509459 ggctaaagtgtacttttcccccct-aacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctt 13509361  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattgaatta 416  Q
    ||||  |||| |||||||   |||||||||||  ||||| || |  |||||||||||| ||||||| || |||||||    
T  13509360 tgcacctttgctccttttggccaattttgaccaagtcaacgcatgtgtggcatgccacatgtgtaaataatgaatta 13509284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 5526226 - 5526096
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| | || || ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  5526226 ggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccat 5526128  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    |||||||||| ||||||| | |||||||||||    
T  5526127 tgcaattttggtccttttgaccaattttgacc 5526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 10470546 - 10470677
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||||||| ||  |||||||   |||  ||||||| | ||||| |||| |||||||| |    
T  10470546 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagccccat 10470645  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| |||||||||||||    
T  10470646 tgcaactttggtccttttgatcaattttgacc 10470677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 25685923 - 25685792
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  25685923 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagccccat 25685824  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | |||||||||||    
T  25685823 tgcaactttggtccttttgaccaattttgacc 25685792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 46637804 - 46637859
Alignment:
Q  362 caattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46637804 caattttgaccggtcaatgcctacgtggcatgccacatgtgtaattattgaattaa 46637859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 48780248 - 48780365
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||||||||||||||||||||| || ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  48780248 ggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 48780347  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||| |||| |||||||    
T  48780348 tgcaactttggtcctttt 48780365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 5525360 - 5525490
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||| ||||||||| |||| || ||| ||||||||||||||||| || ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  5525360 ggctaaagtacatttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5525458  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | |||||||||||    
T  5525459 tgcaactttggtccttttgaccaattttgacc 5525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 403
Target Start/End: Complemental strand, 26421722 - 26421561
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| | || || ||| ||||||||||||||||| ||||||||||| | |||||||||||||| ||||  |||| |||| ||| |    
T  26421722 ggctaaagtgcacttttcccctct-aactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttag-cccat 26421625  T
Q  341 tgcaattttgatcctttttatcaatttt-gaccggtcaatgcctacgtggcatgccacgtgtgt 403  Q
    ||||| ||||||| ||||  ||||||||  |   ||||| |||| |||||||||||||||||||    
T  26421624 tgcaaatttgatcattttagtcaattttaaaatagtcaacgcctgcgtggcatgccacgtgtgt 26421561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 37728662 - 37728535
Alignment:
Q  244 taaagtgcattttt-cctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    |||||||||||||| |||||  ||| ||||||||| ||||||||||||||||||| ||| | |||||||||||||| |||   |||| |||||  |||||    
T  37728662 taaagtgcattttttcctcc--taacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagcttctttg 37728565  T
Q  343 caattttgatcctttttatcaattttgacc 372  Q
    ||  ||||||||||||  ||||||||||||    
T  37728564 catctttgatccttttagtcaattttgacc 37728535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 412
Target Start/End: Original strand, 1289100 - 1289269
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||| | |||||| ||||||| ||| ||| | ||| |||||||  |  ||||||||| ||||||||||||| ||| |  |||| ||| |||| ||||    
T  1289100 taaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgc 1289199  T
Q  344 aattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaattattga 412  Q
    |  |||| |||||||  ||||||||||||| ||||| || || |||||||||||||||| ||||||||||    
T  1289200 atctttggtccttttggtcaattttgaccgagtcaacgcttaagtggcatgccacgtgtataattattga 1289269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 617
Target Start/End: Original strand, 44890878 - 44890952
Alignment:
Q  540 tcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||||| |||||||||||| ||| ||||   |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  44890878 tcttctacatactcctccatgtttttct---tcttccattcaaacccaaactcatgaatcttcatcatcttcaactca 44890952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 330 - 417
Target Start/End: Original strand, 54107948 - 54108035
Alignment:
Q  330 attagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||  |||| || ||||   ||||||| ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  54107948 attagcccctttgcatctttggtctttttggccaattttaaccagtcaatgcctacatggcacgccacgtgtgtaattattgaattaa 54108035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 49308127 - 49308046
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccc 323  Q
    |||||||||||| |||||| |||| || ||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  49308127 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccc 49308046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 13386634 - 13386502
Alignment:
Q  241 ggctaaagtgca-tttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| ||||||| ||| ||| ||| ||||||||||||||||| || | ||||||   |||| ||||||| | ||||| ||||  |||||||     
T  13386634 ggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcccca 13386535  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||| |||| ||||||| | |||||||||||    
T  13386534 ttgcaactttggtccttttgaccaattttgacc 13386502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 312 - 417
Target Start/End: Complemental strand, 8896940 - 8896835
Alignment:
Q  312 aattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    |||||||| |||  |||| |||||||||||||||| |||| | ||||  ||||||||||||| ||||| ||||| |||||||||||||||| |||||| |    
T  8896940 aattttggtcccttaagatttagcccctttgcaatattga-ctttttggtcaattttgaccgagtcaacgcctaagtggcatgccacgtgtataattact 8896842  T
Q  411 gaattaa 417  Q
     ||||||    
T  8896841 aaattaa 8896835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 567 - 617
Target Start/End: Original strand, 43242654 - 43242704
Alignment:
Q  567 ttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  43242654 ttcttcttccattcaaacccaaactcatgattcttcatcatcttcaactca 43242704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 13386014 - 13386147
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaa-acttgcaattttggcctcctaagtatagaaactacaattt-tggccccccaagaattagcccc 338  Q
    |||||||||||| |||||| ||  ||| ||| |||| |||||||||||||||| ||||||||   |||| ||||||| |  ||||| |||| |||||| |    
T  13386014 ggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcctc 13386113  T
Q  339 tttgcaattttgatcctttttatcaattttgacc 372  Q
     |||||| |||| ||||||| |||||||||||||    
T  13386114 attgcaactttggtccttttgatcaattttgacc 13386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 8155741 - 8155914
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggc-ctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    ||||||||| |||||| ||  ||| ||| |||||||||||||||| || | |||||||  | |||||||||||||||||||| |||| |||||| |||||    
T  8155741 taaagtgcacttttccccc--taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttg 8155838  T
Q  343 caattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||  |||  || ||||  |||| ||||||    |||| |||||||| ||| |||||||||||||||| | ||||||    
T  8155839 catctttagtcattttggtcaactttgacttattcaacgcctacgtagcaggccacgtgtgtaattaattaattaa 8155914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 33296227 - 33296306
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    ||||||||||||||  ||||| |||||| ||||||||  |||||||| |||||||||||| |||||| |||||||| ||||    
T  33296227 taaagtgcattttttttccct-aattttcaaaaacttataattttggtctcctaagtataaaaactataattttggtcccc 33296306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 55603628 - 55603456
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||| | ||||||| ||| ||||||||||||||||   | |||  ||| | ||||||| |||||||||||| |||||| ||| | |||||    
T  55603628 taaagtgcactttttc-cccttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc-aagaataagctcatttgc 55603531  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||  |  |||||| | ||||||||||| || |||| ||||   ||||| |||||||||||||||||| ||||||    
T  55603530 aatagtagtcctttatgtcaattttgactcgatcaacgcctgtatggcaggccacgtgtgtaattattaaattaa 55603456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 50909273 - 50909348
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaatttt 317  Q
    |||||||||| ||||||  |||| ||| ||||||||| ||||||||||| |||||||  |||| |||||||||||||    
T  50909273 ggctaaagtgtatttttt-tcccctaagttttaaaaagttgcaattttgacctcctatatataaaaactacaatttt 50909348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 372
Target Start/End: Complemental strand, 2193476 - 2193425
Alignment:
Q  321 cccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||| |||||||||||||||| |||||||||||||||| |  ||||||||||    
T  2193476 cccctaagaattagcccctttacaattttgatccttttgactaattttgacc 2193425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 3928959 - 3928856
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||  |||| ||||||||| |||| ||||  |||| ||||||||||||| | | |  ||||||||||    
T  3928959 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccctt 3928860  T
Q  341 tgca 344  Q
    ||||    
T  3928859 tgca 3928856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 371
Target Start/End: Complemental strand, 46638817 - 46638696
Alignment:
Q  249 tgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattt 348  Q
    |||||||||||||| |||| ||| ||||| ||| |||||||  | |||| | | | ||| ||||||||| |||||| |||| |||| |||||||||| ||    
T  46638817 tgcatttttcctcc-ttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgcaactt 46638719  T
Q  349 tgatcctttttatcaattttgac 371  Q
    |  || |||| ||||||||||||    
T  46638718 tagtctttttgatcaattttgac 46638696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 51291475 - 51291421
Alignment:
Q  238 tatggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcc 292  Q
    |||||||||||| || |||||  ||||||| ||||||||| ||||||||||||||    
T  51291475 tatggctaaagtccaattttcaccccttaagttttaaaaagttgcaattttggcc 51291421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 20919632 - 20919584
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttg 289  Q
    ||||||||||||||||||  ||||||| ||||||||| |||| ||||||    
T  20919632 ggctaaagtgcatttttcaccccttaagttttaaaaagttgcgattttg 20919584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 50909386 - 50909438
Alignment:
Q  365 ttttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||| ||||||  ||| |||||| |||||||||||||||||| ||||||    
T  50909386 ttttgaccagtcaatatctatgtggcacgccacgtgtgtaattatttaattaa 50909438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 4e-49; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 240 - 415
Target Start/End: Complemental strand, 39699868 - 39699694
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| |||| || ||| || |||||||||||||| || |||||||| |||||||||||||||||||||| |||| ||||||||     
T  39699868 tggctaaagtgcacttttcccccct-aactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagcccca 39699770  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaatt 415  Q
    |||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  39699769 ttgcaactttaatccttttggtcaattttgaccggtcaatgcctacgtggcacgccatgtgtgtaattattgaatt 39699694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 240 - 417
Target Start/End: Complemental strand, 36614006 - 36613828
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| | |||||||||||||| ||||| |||| |||||| ||    
T  36614006 tggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcctct 36613907  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| |||  ||||||| ||||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  36613906 ttgcaactttagtccttttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 36613828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 39153214 - 39153041
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||| | ||||||| ||| |||||||||||||||||||| | || ||| | |||||||||||||| ||| | |||| ||| |||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  39153114 atctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtgtaattattaaattaa 39153041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 45148580 - 45148756
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||| | | ||||| ||| |||||||||||||||||||| |||||||| | |||||||||||||| ||||| |||| ||| |||||    
T  45148580 tggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagtaaa-aaactacaattttgcccccctaagatttaacccct 45148678  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||  |||| |||||||   ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  45148679 ttgcatctttggtccttttggccaattttgaccggtcaaagcctacgtggcatgccacatgtgtaattattaaattaa 45148756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 45150068 - 45149895
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcccccc-aagaattagcccctttg 342  Q
    ||||||||| |||||| |||| || ||| |||||||||||||||||||| | |||||| | |||| ||||||||| |||||| |||| ||||||||||||    
T  45150068 taaagtgcacttttcccccct-aactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttg 45149970  T
Q  343 caattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||  ||||||||||||   ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  45149969 catctttgatccttttggccaattttgaccggtcaaagcctacgtggaatgccacgtgtgtaattattaaattaa 45149895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 241 - 405
Target Start/End: Original strand, 24422800 - 24422965
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||||||| ||| ||||||||||||||||| || |||||||| | |||||||||||||||||||| |||| |||||||| |    
T  24422800 ggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccat 24422899  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaa 405  Q
    ||||| ||||||||||||  |||||||||||   ||||| ||||  ||||||||||||||||||||    
T  24422900 tgcaaatttgatccttttggtcaattttgacatagtcaacgcctgtgtggcatgccacgtgtgtaa 24422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 39151934 - 39152107
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||||||||| | ||||||| ||| ||||||||| |||||||||| |||| ||| | |||||||||||||| | |   |||| ||| |||||||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgc 39152033  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| |||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  39152034 atctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacatgtgtaattattaaattaa 39152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 11436042 - 11436210
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| || |||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||| |||| ||| ||| ||    
T  11436042 ggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccatt 11436141  T
Q  341 tgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| | |||||  ||||||||||||| ||||| ||||| |||||||||||| ||||||||||    
T  11436142 tgcatctttggttcttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtgtaatta 11436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 413
Target Start/End: Original strand, 39698563 - 39698734
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || ||||||| |||||||||||| ||||||||||| |||||||| |||||||| |||||||| || | |||| |||||| | |    
T  39698563 ggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttgg-ccactaagatttagcctcgt 39698661  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaa 413  Q
    ||||| ||| ||||||||  ||||||||||||||||||| ||||| ||||| || | ||||||||||||||||    
T  39698662 tgcaactttaatccttttggtcaattttgaccggtcaatacctacatggcacgcaaagtgtgtaattattgaa 39698734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 276 - 417
Target Start/End: Complemental strand, 44412032 - 44411891
Alignment:
Q  276 aacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggt 375  Q
    ||||||||||||| | | |||||||| | |||||||||||||  |||   |||| |||| |||||||||| |||||||||||||  ||||||||||||||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattttgaccggt 44411933  T
Q  376 caatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  44411932 caatgcctacgtggcacgccacgtgtgtaattattaaattaa 44411891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 372
Target Start/End: Original strand, 51684364 - 51684497
Alignment:
Q  239 atggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||| |||| ||||||||    
T  51684364 atggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccc 51684463  T
Q  339 tttgcaattttgatcctttttatcaattttgacc 372  Q
    ||||||  |||| |||||||   |||||||||||    
T  51684464 tttgcatctttggtccttttggccaattttgacc 51684497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 52274952 - 52275133
Alignment:
Q  225 ataataatacaaatatggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    |||||||||| |||| |||||||||||| |||| | ||| ||| ||| ||||||||||||||||| || |||||||| | ||||||||||||||| ||||    
T  52274952 ataataatactaataaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccc 52275051  T
Q  325 caagaattagcccctttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaa 405  Q
     |||| |||||| | |||||| ||||||||||||  |||||||||||   ||||| |||| |||||||||||| ||||||||    
T  52275052 taagatttagcctcattgcaaatttgatccttttggtcaattttgacatagtcaacgcctgcgtggcatgccaagtgtgtaa 52275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 241 - 412
Target Start/End: Complemental strand, 11437300 - 11437128
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||||||| ||| |||||||||||||||||| | | |||||| | |||||||||||||||||||| |||| ||| ||| ||    
T  11437300 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaacccttt 11437201  T
Q  341 tgcaattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaattattga 412  Q
    | ||  ||||||||||||  ||||||||||||| ||||| || || |||||||||||||||| ||||||||||    
T  11437200 tacatctttgatccttttggtcaattttgaccgagtcaacgcttaagtggcatgccacgtgtataattattga 11437128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 44404474 - 44404618
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    ||||||| |||||||| ||| |||||||| | |||||| ||||||||||||| || | ||||||  ||||||  |||| || ||||  ||||||||||||    
T  44404474 aaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaatttgcatctttggtcattttggtcaattttgacc 44404573  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  44404574 ggtcaatgcctacgtggcacgccacgtgtgtaattattaaattaa 44404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 14999285 - 14999457
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||||| |||| || ||| ||||||||||||||||| || |||||||| | ||||||||||||||  || | |    ||||| | |     
T  14999285 ggctaaagtgtacttttcccccct-aactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctctat---ttagctcatc 14999380  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  14999381 tgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccatgtgtgtaactaatgaattaa 14999457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 50680335 - 50680508
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||||||||||| ||||||| ||  |||||||||||||||||||| |||||||||| |||||| |||||| | |||| |||| ||| |||||||||    
T  50680335 taaagtgcatttttcc-cccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgc 50680433  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  ||||||||||||  |||||||||||    |||| |||||||| ||| |||||||||||||||| | ||||||    
T  50680434 atctttgatccttttggtcaattttgacttattcaacgcctacgtagcaggccacgtgtgtaattaattaattaa 50680508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 15000056 - 14999876
Alignment:
Q  241 ggctaaagtgca-tttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||| || |||||||||||| || |||||||||||||||||||||  | |||||||| | || |||||||  || || || || | |||| || |    
T  15000056 ggctaaagttcactttttcctccct-aacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaatcatgaccacctaaaatttagtccat 14999958  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcat----gccacgtgtgtaattattgaattaa 417  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||||    |||||||||||||||| ||||||||    
T  14999957 ttgcaactttgatcctttttgtcaattttgacctgtcaatgcctacgtggcatgccagccacgtgtgtaattaatgaattaa 14999876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 37526975 - 37526802
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||| | |||||| ||||||| ||| |||||||||||||||||||  ||||| ||||||||| |||||||||| |||| |||| |||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttgg-cccctaagatttagcccctttgc 37526877  T
Q  344 aattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| || |||| ||||||||||||    |||| |||||||||| | |||||||||||||||| | ||||||    
T  37526876 atctttggtctttttgatcaattttgacttattcaacgcctacgtggtaggccacgtgtgtaattaattaattaa 37526802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 20424927 - 20425083
Alignment:
Q  20 aacaaagagaaaaccaacaaagtagtaaatttcttgatatgcacattgttggtccctggagtg-tcccgtagcatacttggactatattcaagaaccacc 118  Q
    ||||||||||| ||||||| ||||| ||||||| |||||||| ||| |||||||| ||||||| |  |||| || ||||||||||||||||||| ||||     
T  20424927 aacaaagagaagaccaacatagtagcaaatttcctgatatgcgcatcgttggtccttggagtgatgtcgtaacagacttggactatattcaagatccact 20425026  T
Q  119 atcttggtgtggtttgggttcctctattgtcgaggtttccaaagaggttttaaatcc 175  Q
    || |||||||||||| |  || || | |||||| ||||| |||||||||||||||||    
T  20425027 atattggtgtggtttagaatcttccaatgtcgatgtttctaaagaggttttaaatcc 20425083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 388
Target Start/End: Complemental strand, 45157309 - 45157163
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||| || |||| || ||| |||||||||||||||||||| |||| ||| | |||||||||||||| |||   |||| ||| ||||||    
T  45157309 ggctaaagtgcactttccccccct-aagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 45157211  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtg 388  Q
    ||||  |||| |||||||  |||||||||||| |||||||||||||||    
T  45157210 tgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtg 45157163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 372
Target Start/End: Complemental strand, 24426182 - 24426045
Alignment:
Q  235 aaatatggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattag 334  Q
    ||||| || ||||||||| ||| || ||  ||| ||| |||||||||||||||||||| |||||||| | ||||||||||||| | |||| |||| ||||    
T  24426182 aaataaggttaaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttag 24426083  T
Q  335 cccctttgcaattttgatcctttttatcaattttgacc 372  Q
    |||| |||||| |||||| |||||  ||||||||||||    
T  24426082 ccccattgcaaatttgatacttttggtcaattttgacc 24426045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 35594217 - 35594383
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||||||||||||||| || |||||||||  ||||||||||||| | |||| || | ||||||||||    
T  35594217 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacc-cctaagtattaaaactacaatttt-gacccctaaaatttagcccctt 35594314  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| |||||||   ||||||||||  |||||| || ||  ||||||||||||||||||||||    
T  35594315 tgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtgtaatta 35594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 35067103 - 35066973
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| ||||| |||| ||||||||| |||| | | | |||||||||||||||||||| || | ||||||||||    
T  35067103 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccctt 35067004  T
Q  341 tgcaattttgatcctttttatcaattttgac 371  Q
    ||||||  |  |||||||  |||||||||||    
T  35067003 tgcaataatagtccttttggtcaattttgac 35066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 244 - 417
Target Start/End: Complemental strand, 43378810 - 43378637
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||||| || ||||| ||| |||||||| ||||||||  | |||||||| | ||| |||||||||| || || |||| ||||| |||||||    
T  43378810 taaagtgcacttttc-tctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgc 43378712  T
Q  344 aattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  ||| ||||||||  || |||||||||  ||||| || || |||||||||||||||||||| |||||||||||    
T  43378711 atctttaatccttttggtcgattttgaccaagtcaacgcatatgtggcatgccacgtgtgtaaatattgaattaa 43378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 36612853 - 36613029
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||| ||||||| ||| ||||| ||||||||||||  || |||||| | |||||||||||||  ||||| |||| |||| |||||    
T  36612853 ggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttgg-atcttaagtacaaaaactacaattttaaccccctaagatttagtccctt 36612951  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| || ||||  |||||||| ||    |||| || ||||||||| |||||||||||||||| | ||||||    
T  36612952 tgcatctttggtcattttggtcaattttaacttattcaacgcttacgtggcaggccacgtgtgtaattaattaattaa 36613029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 417
Target Start/End: Complemental strand, 52276232 - 52276087
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| ||| |||||||||| |||||||| | |||||| || ||| | |||| |||| |||||||| |||||| |||||||||||| |||||||||||||    
T  52276232 aaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccccattgcaaatttgatccttttgatcaattttgacc 52276133  T
Q  373 -ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
      ||||| || | | |||||||||||| |||||| || ||||||||    
T  52276132 tagtcaacgcttgcatggcatgccacgcgtgtaaataatgaattaa 52276087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 41364828 - 41364959
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| ||||| |||| ||| ||| |||||||||||||||||||| ||||| ||   |||| ||||||| | ||||| |||| ||||||||     
T  41364828 tggctaaagtgcacttttc-tcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagcccca 41364926  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||| |||| || |||| |||||||||||||    
T  41364927 ttgcaactttggtcattttgatcaattttgacc 41364959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 241 - 404
Target Start/End: Original strand, 52827347 - 52827511
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| ||||||||||||||||| || ||||||||   |||| |||||||   ||||| |||| |||||||| |    
T  52827347 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 52827446  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    ||||| |||| ||||||| | |||||||||||  ||||| ||| |  ||||||||||| ||||||    
T  52827447 tgcaactttggtccttttgaccaattttgaccaagtcaacgccgatttggcatgccacatgtgta 52827511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 52828168 - 52828040
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||  ||||||| |||||||||||||||||||  ||||||||   |||| ||||||| | ||||| |||| |||||||| ||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 52828069  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    || |||| ||||||| | |||||||||||    
T  52828068 aactttggtccttttgaccaattttgacc 52828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 240 - 417
Target Start/End: Complemental strand, 39222576 - 39222397
Alignment:
Q  240 tggctaaagtgcatttttcctccctt-aatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    ||||||||||||| |||| | ||||| || ||| |||||||||||||||||||| |||||||||| |||||||||| || |||| | |||| || ||||     
T  39222576 tggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgccca 39222477  T
Q  339 tttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |||| || ||||   ||||||||||    |||| |||||||||||||| ||||||| |||||| | ||||||    
T  39222476 tttgcatctttggtctttttgggcaattttgacttattcaacgcctacgtggcatgacacgtgtataattaattaattaa 39222397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 35595294 - 35595125
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaactt-gcaattttggcctcctaagtatagaaacta-caattttggccccccaagaattagcccc 338  Q
    |||||||||| | |||||| ||  ||| ||| |||||||| ||||||||| || |||| ||||| |||||| |||||||||||||  |||| ||||||||    
T  35595294 ggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccct-aagatttagcccc 35595196  T
Q  339 tttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||||  |||| |||||||  ||||||||||||  ||||||||  |  ||||||||||||||||||||||    
T  35595195 tttgcatctttggtccttttggtcaattttgaccaagtcaatgctgatttggcatgccacgtgtgtaatta 35595125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 43058817 - 43058915
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgac 371  Q
    ||||||||||||||||| || |||||||| | ||||||||||||| |||| | |||| ||||||||||| ||  ||||||||||||  |||||||||||    
T  43058817 aaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttacatctttgatccttttggtcaattttgac 43058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 23980567 - 23980458
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||  |||||||| | |||||| |||||||| | || |||| ||||||||||    
T  23980567 ggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccctt 23980468  T
Q  341 tgcaattttg 350  Q
    |||| |||||    
T  23980467 tgcatttttg 23980458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 372
Target Start/End: Original strand, 7983053 - 7983180
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||||| |||| ||| ||| || ||||||||||||||||| |||| ||||  |||| ||||||||| ||||| |||| ||| |||| ||||    
T  7983053 taaagtgcacttttc-tcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgc 7983151  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    || ||| ||||||||  ||||||||||||    
T  7983152 aaatttcatccttttggtcaattttgacc 7983180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 46525827 - 46525730
Alignment:
Q  315 tttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaattattga 412  Q
    |||||||||| |||| ||||||||||||||||| |||| |||||  ||||||||||||  ||||| || ||  ||||||||||||||||||||||||||    
T  46525827 tttggccccctaagatttagcccctttgcaattgtgat-cttttggtcaattttgaccaagtcaacgcttatttggcatgccacgtgtgtaattattga 46525730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 7675546 - 7675457
Alignment:
Q  255 tttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgca 344  Q
    ||||| || |||| ||| ||||||||||||||||| ||||||||||| | ||| || ||||||| ||||| |||| ||||||||||||||    
T  7675546 tttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgca 7675457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 12390082 - 12389906
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||  | |||| ||| | ||| || ||||||||| |||| ||| ||||||||||    
T  12390082 ggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggc-cccctagatttagcccctt 12389984  T
Q  341 tgcaattttgatcctttttatcaattttga-ccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |  ||||||| ||| ||||||| ||  |||| | ||  |||||||||||||||||||| || ||||||||    
T  12389983 tgcaataatagtccttttgatctattttgacccaatcaacgtctgtgtggcatgccacgtgtgtaaataatgaattaa 12389906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 417
Target Start/End: Complemental strand, 16281321 - 16281227
Alignment:
Q  321 cccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||| ||||| ||||||||||  |||| || |||||  ||||||||||| |||||||||||| || |||||  |||||||||||||||||||||    
T  16281321 cccccaaaaattaacccctttgcatatttggtcatttttcccaattttgacccgtcaatgcctacctgacatgc--cgtgtgtaattattgaattaa 16281227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 16290093 - 16290270
Alignment:
Q  241 ggctaaagtgcatttttcctccct-taatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||||||| | || | |||  || ||||| |||||||||||| | | || ||||| |||||||||||||  || ||||||||||| |||||    
T  16290093 ggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaattttaacctcccaagaattaacccct 16290192  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || ||  |||| || |||||  ||||||||||  ||||  |||  | || |||||||| |||||||||||||||||||    
T  16290193 ttacatatttggtcattttttccaattttgactagtcagcgccatcatgacatgccacatgtgtaattattgaattaa 16290270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 370
Target Start/End: Complemental strand, 50681706 - 50681580
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| | ||||||||| |||||||||||||||||||   |||| |||| |||||||||| |||| |||    || |||||| ||    
T  50681706 tggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattggtccc----gatttagcctct 50681611  T
Q  340 ttgcaattttgatcctttttatcaattttga 370  Q
    |||||  |||| |||| || |||||||||||    
T  50681610 ttgcatctttggtcctattgatcaattttga 50681580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 358
Target Start/End: Complemental strand, 51685866 - 51685749
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| ||||| |||| |||||||||  ||| ||| | |||||||||||||| ||||| |||| ||||||||||    
T  51685866 ggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccctt 51685767  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||  |||| |||||||    
T  51685766 tgcatctttggtcctttt 51685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 417
Target Start/End: Original strand, 43377742 - 43377897
Alignment:
Q  263 cttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatc 362  Q
    ||||||||||||| |||||||||||| | |   |||||||| ||| || |||||||||| || || | |||| | |||| ||  ||||||||||||  ||    
T  43377742 cttaatttttaaacacttgcaattttagtcctttaagtataaaaattataattttggcctcctaaaatttagtctctttacacctttgatccttttggtc 43377841  T
Q  363 aattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||  ||||| || |  |||||||||||||||||||| || ||||||||    
T  43377842 aattttgaccaagtcaacgcatgtgtggcatgccacgtgtgtaaataatgaattaa 43377897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 390
Target Start/End: Original strand, 40384748 - 40384874
Alignment:
Q  264 ttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatca 363  Q
    |||||||| ||||| |||||||||| | |||||| ||| | ||||||||||||||  |||| || | |||||| |||||||  |||| |||||||   ||    
T  40384748 ttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggcca 40384847  T
Q  364 attttgaccggtcaatgcctacgtggc 390  Q
    |||||||||| |||||| ||| |||||    
T  40384848 attttgaccgatcaatgtctatgtggc 40384874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 385
Target Start/End: Original strand, 45156052 - 45156193
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||| || |||||||||||||| ||| |||||||| |||||||| ||| ||| ||| | |||||||||||||  ||| | |||| ||| || |||||     
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttgt 45156151  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctac 385  Q
    |  |||| || ||||  |||||||||||| ||||||| ||||    
T  45156152 atctttggtctttttggtcaattttgaccagtcaatgtctac 45156193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 21185208 - 21185264
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctccta 297  Q
    |||||||||||||||||| |||||||| ||||||||| ||||  |||||||||||||    
T  21185208 ggctaaagtgcatttttcatcccttaagttttaaaaagttgcgcttttggcctccta 21185264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 33088099 - 33088243
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc 372  Q
    ||||||||| ||||||   ||||||| |||| |||||||||||||   |||  |||| ||||||| |||||   |||  |||||||   ||||||| |||    
T  33088099 aaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgcttctttagtccttttggccaattttaacc 33088198  T
Q  373 ggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| |||||||||| | ||| |||||||||||||| ||||||    
T  33088199 ggtcaaagcctacgtggtacgccgcgtgtgtaattattaaattaa 33088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 41366231 - 41366101
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| | | ||| ||| |||||| ||||||||| ||| | |||||||  |||| |||| ||| |||||| |||| |||||||| |    
T  41366231 ggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaa-tttagccccctaagatttagccccat 41366133  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | || ||||||||    
T  41366132 tgcaactttggtccttttgaccacttttgacc 41366101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 417
Target Start/End: Complemental strand, 14512654 - 14512547
Alignment:
Q  310 acaattttggccccccaagaattagcccctttgcaattttgatcctttttat-caattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatt 407  Q
    |||||||||| |||| | || ||||||||||||||||  |||  |||||||  |||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  14512654 acaattttggtcccctatgatttagcccctttgcaatagtga--ctttttaggcaattttgacctagtcaacgcctaagtggcatgccacgtgtgtaatt 14512557  T
Q  408 attgaattaa 417  Q
    | | ||||||    
T  14512556 actaaattaa 14512547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 46524613 - 46524706
Alignment:
Q  315 tttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||||||| |||| ||||||||||||||||| |||| |||||   |||||||||||  ||||| || ||  ||||||||||||||||||||||    
T  46524613 tttggccccctaagatttagcccctttgcaattgtgat-cttttggccaattttgaccaagtcaacgcttatttggcatgccacgtgtgtaatta 46524706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 7674528 - 7674603
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttg 318  Q
    |||||||||||  |||||| |||| || |||||||||||||||||||||| | |||||||| | ||||||||||||||    
T  7674528 ggctaaagtgcccttttcccccct-aacttttaaaaacttgcaattttgggc-cctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 17505040 - 17505093
Alignment:
Q  320 ccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccg 373  Q
    |||||||||||||||||| |||||||| |||||  ||||| |||||||||||||    
T  17505040 ccccccaagaattagcccatttgcaatattgatattttttgtcaattttgaccg 17505093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 33088686 - 33088609
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttg 350  Q
    ||||||||||||||||| ||   |||||| | |||||||||||||| | ||| |||| ||||||||||||||| ||||    
T  33088686 aaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccctttgcaactttg 33088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 417
Target Start/End: Original strand, 39221404 - 39221491
Alignment:
Q  331 ttagcccctttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||||  |||| |||||||  |||||||||||    |||| |||||||||||| |||||||||||||||| | ||||||    
T  39221404 ttagcccctttgcatctttggtccttttggtcaattttgactaattcaacgcctacgtggcaggccacgtgtgtaattaattaattaa 39221491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 408
Target Start/End: Original strand, 46312185 - 46312232
Alignment:
Q  362 caattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  46312185 caattttgacctggtcaacgcctaggtggcatgccacgtgtgtaatta 46312232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 11190385 - 11190434
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttgg 290  Q
    |||||||||||| |||||  ||||||| ||||||||| ||||||||||||    
T  11190385 ggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttgg 11190434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 21945708 - 21945763
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctccta 297  Q
    |||||||||| | |||||| || |||| ||||||||| |||||||||||||||||||    
T  21945708 ggctaaagtgtacttttcc-cctttaagttttaaaaagttgcaattttggcctccta 21945763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 21946587 - 21946523
Alignment:
Q  354 ctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| ||||||||||| || |||| || ||| || ||||||||||||||||||||| ||||||    
T  21946587 ctttttttcaattttgactcgatcaacgcttacatgacatgccacgtgtgtaattattaaattaa 21946523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 43060075 - 43059943
Alignment:
Q  273 aaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgac- 371  Q
    ||||| ||| ||||||| || | |||||| | |||||||||||||| ||||  |||| ||||| | ||||||  |||| |||||||  |||||||||||     
T  43060075 aaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcatttgcatctttggtccttttggtcaattttgact 43059976  T
Q  372 cggtcaatgcctacgtggcatgccacgtgtgta 404  Q
       |||| |||||||||||| ||||| ||||||    
T  43059975 tattcaacgcctacgtggcaggccacatgtgta 43059943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 239 - 417
Target Start/End: Original strand, 231 - 409
Alignment:
Q  239 atggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    |||||||||||||| ||| || ||||||| ||| ||||| |||||||||||| | |||| ||| | |||||| |||||||| |||| |||||||||||||    
T  231 atggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccc 330  T
Q  339 tttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||  |||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  331 tttgcatatttgatcctttttcccaattttgaccggtcaacgcctatgtggcatgccacgtgtgtaattattgaattaa 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 417
Target Start/End: Complemental strand, 1058 - 903
Alignment:
Q  262 ccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttat 361  Q
    |||||| ||||||||| |||||||||||| | | || ||| | |||||| |||||||||||||||||||||||||||||||||  |||| ||||||||      
T  1058 ccttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcatatttggtcctttttcc 959  T
Q  362 caattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  958 caattttgaccggtcaacgcttacgtggcatgccacgtgtgtaattattgaattaa 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 22629483 - 22629663
Alignment:
Q  241 ggctaaagtgcatttttcc---tcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccc 337  Q
    |||||||||||||||||||   |||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||| |||| |||||||    
T  22629483 ggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagccc 22629582  T
Q  338 ctttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||  |||| |||||||  |||||||||||    |||| ||||||||||| ||||||||||||||||| | ||||||    
T  22629583 ctttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcctgccacgtgtgtaattaattaattaa 22629663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 7500455 - 7500631
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||||||| ||| |||||||||||||||||  |  |||||||||||||| ||||||||||||||| |||| ||||||||||    
T  7500455 ggctaaagtgcacttttcc-cccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctt 7500553  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  ||||||||||||  |||||||||||    |||| |||||||||||| |||| ||||||||||| | ||||||    
T  7500554 tgcatctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccatgtgtgtaattaattaattaa 7500631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 14999228 - 14999080
Alignment:
Q  269 ttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaatttt 368  Q
    |||| |||||||||||||||| || ||||| || | |||||||||||||||| ||| |||| ||||||||||||||  |||| ||||||   ||||||||    
T  14999228 ttttcaaaacttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatctttgttcctttaggtcaatttt 14999129  T
Q  369 gaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||||||||||| ||||||||||||||  |||||||||||| ||||||    
T  14999128 gaccggtcaatgcttacgtggcatgccatatgtgtaattattaaattaa 14999080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 7501953 - 7501776
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| |||||||||  |||| ||||||||||||||  ||||  |||||||||    
T  7501953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccctt 7501854  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||| |||||||  |||||||||||    ||||||||||||||||| |||||||||||||||| | ||||||    
T  7501853 tgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtgtaattaattaattaa 7501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 11658379 - 11658556
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||| |||| |||||| ||||||| ||| |||||| ||||||||| ||| |||| ||| | ||||||||||||||| ||| ||||||||||||||||    
T  11658379 ggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagcccctt 11658478  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || |||  |  |||||| | ||||||||||| ||||||| |||||  ||||| |||||||||||||||||| ||||||    
T  11658479 tgtaatagtagtcctttatgtcaattttgactcggtcaacgcctatatggcaggccacgtgtgtaattattaaattaa 11658556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 240 - 405
Target Start/End: Original strand, 31659621 - 31659788
Alignment:
Q  240 tggctaaagtgcattttt-cctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccc 338  Q
    ||||||||||||| |||| || ||| ||| ||| |||||||| |||||||| || |||||||| | |||||||||||||||||||| |||| ||||||||    
T  31659621 tggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccc 31659720  T
Q  339 tttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaa 405  Q
     |||||| ||||||||||||  |||||||||||   ||||| || | |||||||||||||||||||||    
T  31659721 attgcaaatttgatccttttggtcaattttgacatagtcaacgcatgcgtggcatgccacgtgtgtaa 31659788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 18371423 - 18371592
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| | | ||| ||| |||||||||||||||||||| | |||||| | |||||||||||||||||||| |||| ||||| | |    
T  18371423 tggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacat 18371522  T
Q  340 ttgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    |||||  ||||||||||||  |||||||||||    |||| |||||||||||| ||||||||| ||||||    
T  18371523 ttgcatctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtataatta 18371592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 769413 - 769589
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||||||| ||||||||||||||||| | ||||||||| | ||| || ||||||||| |||  ||||||| ||| ||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccatt 769512  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  ||||||||||||   |||||||||||| |||||  |||||||||| |  ||||||||||||||| ||||||    
T  769513 tgcatctttgatccttttgcccaattttgaccgatcaatatctacgtggcacgttacgtgtgtaattatttaattaa 769589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 11662649 - 11662515
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||| ||   ||| ||| | |||||| ||||||||||||||||||||||||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T
Q  344 aattttgatcctttttatcaattttgaccggtcaa 378  Q
    |||  |  |||||| | |||||||||| |||||||    
T  11662549 aatagtagtcctttatgtcaattttgatcggtcaa 11662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 18372534 - 18372381
Alignment:
Q  265 taatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaa 364  Q
    ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| |||||||||||| |  |||| |||||||  ||||    
T  18372534 taattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtccttttggtcaa 18372435  T
Q  365 ttttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||    |||| | ||| ||||| ||||||||||||||||| | ||||||    
T  18372434 ttttgacttattcaacgtctatgtggcctgccacgtgtgtaattaattaattaa 18372381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 34352887 - 34352711
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||| | ||  ||||||| |||||||| | ||||||| | | |||||| | |||||| ||||||||||| | |||| ||| ||   |    
T  34352887 ggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaaccttat 34352788  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| ||| ||| ||||   ||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  34352787 tgcaactttaatcattttggccaattttgaccggtcaatgcctacgtgacacgccacgtgtgtaattattgaattaa 34352711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 244 - 404
Target Start/End: Complemental strand, 42886384 - 42886224
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||  | | ||| ||| ||||| ||||||||||| || ||||| || | ||||||||||||| |||||| |||| ||||||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    |  ||||||| ||||  ||||||||||||| |||||| ||| |||||||||||||||||||    
T  42886284 atctttgatcattttggtcaattttgaccgatcaatgtctatgtggcatgccacgtgtgta 42886224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 31949322 - 31949453
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||||||  || ||||||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| |||||||| |    
T  31949322 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 31949421  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| |||||||||||||    
T  31949422 tgcaactttggtccttttgatcaattttgacc 31949453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 34351524 - 34351664
Alignment:
Q  273 aaaaacttgcaattttggc-ctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgac 371  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||  ||||  |||| ||||||   ||||||  || ||    || | ||||||||||    
T  34351524 aaaaacttgcaattttggctctcc-aagtatagaaactacaattttaaccccttaagatttagcctaattgcaaccttaat----ttgaccaattttgac 34351618  T
Q  372 cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  34351619 cggtcaatgcctacgtggcacgccacgtgtgtaattattgaattaa 34351664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 3227695 - 3227564
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| |  |||| |||| |||||||| |    
T  3227695 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagccccat 3227596  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| |||||||||||||    
T  3227595 tgcaactttggtccttttgatcaattttgacc 3227564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 240 - 372
Target Start/End: Complemental strand, 47525469 - 47525337
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||| ||| |||||||||||||||| ||| |||||||||  |||| ||||||| | ||||| |||| ||||||||     
T  47525469 tggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagcccca 47525370  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||| |||| ||||||| | |||||||||||    
T  47525369 ttgcaactttggtccttttgaccaattttgacc 47525337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 309 - 407
Target Start/End: Original strand, 14998048 - 14998145
Alignment:
Q  309 tacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaatt 407  Q
    |||||||||||||||| |||| ||||||||||||||  |||| |||||||  |||||||| | |||||||||||||| | |||||||||||||||||||    
T  14998048 tacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttaatcggtcaatgcctacat-gcatgccacgtgtgtaatt 14998145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 48935005 - 48934899
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||| ||||||| ||  ||||||| | |||||| |||||||  ||||||||||||||||| |    
T  48935005 tggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccat 48934906  T
Q  340 ttgcaat 346  Q
    |||||||    
T  48934905 ttgcaat 48934899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 617
Target Start/End: Original strand, 33131956 - 33132032
Alignment:
Q  538 cttcttcttcatactcctccaggttcttcttcttcttccattcaaacccaaactcatgaatattcatcatcttcatctca 617  Q
    ||||||||||||||||||| || ||||   ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  33131956 cttcttcttcatactcctcaagattct---tcttcttccattcaaacccaaactcatgaatcttcatcatcttcaactca 33132032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 31949903 - 31949772
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| | |||| ||| ||| ||| |||||||||||||||||||| ||||| ||   |||| ||||||| |  |||| |||| |||||||| |    
T  31949903 ggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagccccat 31949804  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| |||||||||||||    
T  31949803 tgcaactttggtccttttgatcaattttgacc 31949772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 242 - 372
Target Start/End: Original strand, 3227109 - 3227238
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| ||| || |||| |||||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||  |||| |||||||| ||    
T  3227109 gctaaagtgcactttccccccct-aattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccatt 3227207  T
Q  342 gcaattttgatcctttttatcaattttgacc 372  Q
    |||| |||| ||||||| | |||||||||||    
T  3227208 gcaactttggtccttttgaacaattttgacc 3227238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 404
Target Start/End: Original strand, 17781663 - 17781825
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    |||||||||| |||||| ||| ||| ||| ||||||||||||||||| || ||||||||   |||| |||||||   ||||| |||| |||||||| |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  343 caattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgta 404  Q
    ||| |||| ||||||| | |||||||||||  ||||| ||| |  ||||||||||| ||||||    
T  17781763 caactttggtccttttgaccaattttgaccaagtcaacgccgatttggcatgccacatgtgta 17781825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 22630553 - 22630423
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| ||||||  || ||| ||| |||||||||||||||||||| ||||| || | ||||||||||||| |||||| |||| | |||| |||    
T  22630553 ggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctctt 22630454  T
Q  341 tgcaattttgatcctttttatcaattttgac 371  Q
    || |  |||| |||||||  |||||||||||    
T  22630453 tgtatctttggtccttttggtcaattttgac 22630423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 47369781 - 47369958
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||| |||| ||||  |||| ||| ||| |||||||||||||||| ||||| |||||| | |||||| ||||||||||||  |||| ||||||||||    
T  47369781 ggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctt 47369880  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  |||  |  ||||  |||||||||||    |||| ||||| |||||| |||||||||||||||| | ||||||    
T  47369881 tgcatctttagttattttggtcaattttgacttattcaacgcctatgtggcaggccacgtgtgtaattaattaattaa 47369958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 312 - 410
Target Start/End: Complemental strand, 770791 - 770693
Alignment:
Q  312 aattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    ||||||||||||| || | ||||||||||||||  ||||||| ||||  |||||||||||||||||||| ||||||||   | ||||| ||||||||||    
T  770791 aattttggccccctaaaatttagcccctttgcatctttgatcattttggtcaattttgaccggtcaatgtctacgtggtcagtcacgtatgtaattatt 770693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 372
Target Start/End: Original strand, 127337 - 127466
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |||| || ||| |||||||||||||||||| | ||||||||   |||| ||||||| | ||||| |||| |||||||  |    
T  127337 ggctaaagtgcacttttcccccct-aactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttag-ccccctaagatttagcccaat 127434  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| ||||||| | |||||||||||    
T  127435 tgcaactttggtccttttgaccaattttgacc 127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 407
Target Start/End: Original strand, 6618235 - 6618374
Alignment:
Q  269 ttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatcctttttatcaatttt 368  Q
    |||| ||||||||||||||||    | ||| |||| ||| |||||||||| | ||| |||| || ||| | |||||| ||||||| |||| |||||||||    
T  6618235 ttttcaaaacttgcaattttgattccttaaatataaaaattacaattttgactccctaagattttgcctcattgcaaatttgatcattttgatcaatttt 6618334  T
Q  369 gacc-ggtcaatgcctacgtggcatgccacgtgtgtaatt 407  Q
    ||||  ||||| ||||| |||||||||||| |||||||||    
T  6618335 gacctagtcaacgcctatgtggcatgccacatgtgtaatt 6618374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 417
Target Start/End: Original strand, 46482599 - 46482774
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    ||||||||||||||||  | | ||||||| ||||| ||| || |||| || |||| ||| | |||||| ||||||   |||| |||| ||| | ||||||    
T  46482599 ctaaagtgcatttttctcctcctaattttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctcctttg 46482698  T
Q  343 caattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    || |||| ||||||||  |||||||||||    ||||||||||||||||| |||| ||||||||||| | ||||||    
T  46482699 cattttttatccttttggtcaattttgacttattcaatgcctacgtggcaagccatgtgtgtaattaattaattaa 46482774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 128699 - 128571
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| ||||||  || ||| ||| ||||| ||||||||||| || ||||||||   |||| ||||||| | ||||| |||| | |||||| ||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgc 128600  T
Q  344 aattttgatcctttttatcaattttgacc 372  Q
    || ||||| |||||| | |||||||||||    
T  128599 aactttgacccttttaaccaattttgacc 128571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 17782654 - 17782558
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccc 337  Q
    |||||||||||| |||||| ||  ||| ||| |||||||||||||||||||| ||||||||   |||| ||||||| | ||||| |||| |||||||    
T  17782654 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 417
Target Start/End: Complemental strand, 32253458 - 32253352
Alignment:
Q  311 caattttggccccccaagaattagcccctttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattatt 410  Q
    |||||||| || || |||| |||| |||||||||  |||| |||||||    |||||||||||||||||| |||||||||| ||||  ||| ||||||||    
T  32253458 caattttgaccacctaagatttagtccctttgcatctttggtccttttggcaaattttgaccggtcaatgtctacgtggcacgccatctgtataattatt 32253359  T
Q  411 gaattaa 417  Q
     ||||||    
T  32253358 taattaa 32253352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 43899443 - 43899525
Alignment:
Q  236 aatatggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggc 320  Q
    |||| ||||||||| |||||||  |||||||| ||| |||||||||||||||||  || |||| |||| ||| ||||||||||||    
T  43899443 aatagggctaaagtacattttt--tcccttaactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttggc 43899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 21505416 - 21505531
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||  ||| ||| ||||| |||| ||||||||| || |  || | |||||||||||||| ||||  |||| ||||||||||    
T  21505416 ggctaaagtgcacttttccccc--taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctt 21505513  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||  |||| |||||||    
T  21505514 tgcatctttggtcctttt 21505531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 20163657 - 20163585
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaa 313  Q
    |||||||||||| || ||| ||| ||| ||| |||||||||||||||||||  |||| ||| | |||||||||    
T  20163657 ggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 19488 - 19665
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||  |||| |||| ||| ||||||    
T  19488 ggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccctt 19587  T
Q  341 tgcaattttgatcctttttatcaattttgac-cggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||  ||||||| ||||  |||||||||||    |||| |||||||||||| ||||| |||||||||| | ||||||    
T  19588 tgcatctttgatcattttggtcaattttgacttattcaacgcctacgtggcaggccacatgtgtaattaattaattaa 19665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 260 - 417
Target Start/End: Original strand, 3694 - 3851
Alignment:
Q  260 tcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgcaattttgatccttttt 359  Q
    |||| ||| ||| |||||||||||||||||||| ||| |||| |||||||| |||||| | |||| |||| |||||| | |||||| ||| ||| ||||     
T  3694 tcccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagccgcattgcaactttaatctttttg 3793  T
Q  360 atcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
     ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||    
T  3794 gtcaattttgactggtcaatgcctacgtggcacgccacgtgtgtaattatttaattaa 3851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 4829 - 4655
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| ||| ||||||| || |||||||||| ||||||||||||| ||||| || |||||||||||||||| ||| | ||   |||||||| ||    
T  4829 gctaaagtgcactttccctccct-aacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccatt 4731  T
Q  342 gcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||| ||| |||||||| | |||||||||||| |||||||||||||| |||| || ||||||||  ||||||||||    
T  4730 gcaactttaatccttttgaccaattttgaccgatcaatgcctacgtgacatgtcatgtgtgtaacgattgaattaa 4655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 241 - 417
Target Start/End: Complemental strand, 3408 - 3233
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| |||||| |||  |||||||| |||||||| || | || ||| | |||||| |||||||| |||| |||| ||||||||||    
T  3408 ggctaaagtgcacttttccccccttactttc-aaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccctt 3310  T
Q  341 tgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    ||||| |||||||||||||  ||||||| || ||||||||||||||| ||||||||| ||||| |||| ||||||||    
T  3309 tgcaactttgatcctttttgccaatttttactggtcaatgcctacgtagcatgccacatgtgttattaatgaattaa 3233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 61559 - 61429
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||||| | |||||| ||||||||||||| | || ||||||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  342 gcaattttgatcctttttatcaattttgacc 372  Q
    |||  |||| |||||||  ||||||||||||    
T  61459 gcatctttggtccttttggtcaattttgacc 61429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 60089 - 60221
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||||||||| || |||| ||||| |||||||||||||| ||||| | || |||||||||    
T  60089 tggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccct 60188  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    |||||  |||| || ||||  ||||||||||||    
T  60189 ttgcatctttggtctttttggtcaattttgacc 60221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 5539 - 5408
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||| ||| ||||||| ||||||||||||||||| || | |||||| | |||||||||||||| ||||  |||| |||||||| |    
T  5539 ggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagccccat 5440  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    | ||| ||||||||||||  | ||||||||||    
T  5439 tacaaatttgatccttttggttaattttgacc 5408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 49186 - 49109
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaatttt 317  Q
    |||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  49186 tggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 1439 - 1607
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||| | |||||| ||  ||| ||| ||||||||||||||||| || |||| ||||| |||||| ||||||| ||||| |||| ||||||| ||    
T  1439 ggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatt 1538  T
Q  341 tgcaattttgatcctttttatcaattttgacc-ggtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  |||| |||||||  ||||||||||||  ||||||||  |  ||||||||||| ||||||||||    
T  1539 tgcatctttggtccttttggtcaattttgaccaagtcaatgctgatttggcatgccacatgtgtaatta 1607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 49534 - 49403
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| |||||  ||||||| ||| ||||| |||||||||||||| ||||   ||| |||||||||||||| ||||| |||| ||||| ||||    
T  49534 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 49435  T
Q  341 tgcaattttgatcctttttatcaattttgacc 372  Q
    ||||| |||| |||||||   |||||||||||    
T  49434 tgcaactttggtccttttggccaattttgacc 49403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 39344 - 39395
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcc 292  Q
    |||||||||||| |||||| ||||||| ||||||||| || |||||||||||    
T  39344 ggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggcc 39395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 243 - 408
Target Start/End: Original strand, 18730 - 18896
Alignment:
Q  243 ctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttg 342  Q
    |||||||||| |||| | | ||||| ||||||||| |||| |||||| ||||||| | | | |||||||||||||| || || |||||||| |||||||     
T  18730 ctaaagtgcactttttccctcttaacttttaaaaagttgcgattttgacctcctatgaacaaaaactacaattttgacctcctaagaattaaccccttta 18829  T
Q  343 caattttgatcctttttatcaattttgaccg-gtcaatgcctacgtggcatgccacgtgtgtaatta 408  Q
    ||||  || ||||||||| |||||||| ||| ||||| ||  |  ||||||||||||||||||||||    
T  18830 caatagtggtcctttttagcaattttggccgagtcaacgctgatttggcatgccacgtgtgtaatta 18896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 358
Target Start/End: Complemental strand, 7516 - 7399
Alignment:
Q  241 ggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctt 340  Q
    |||||||||||| || ||| ||  ||| ||| ||||| || | |||||| || |||| ||| |||||||||||||||| ||||| |||| ||||||||||    
T  7516 ggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagcccctt 7417  T
Q  341 tgcaattttgatcctttt 358  Q
    ||||| ||||||||||||    
T  7416 tgcaactttgatcctttt 7399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 37147 - 37278
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||||   |||| ||||| ||||||||||| || |||||||| | |||| ||||||||||||||| | || ||||||||     
T  37147 tggctaaagtgcacttttcc-ccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagcccca 37245  T
Q  340 ttgcaattttgatcctttttatcaattttgacc 372  Q
    ||| || ||| ||| ||||  ||||||||||||    
T  37246 ttgaaaatttcatcattttggtcaattttgacc 37278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 244 - 417
Target Start/End: Original strand, 6346 - 6509
Alignment:
Q  244 taaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccctttgc 343  Q
    ||||||||| |||||| ||||||| ||| ||||| || | ||||| ||| |||| ||| | |||||||||||||| ||||| |||| ||||||  |||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgc 6445  T
Q  344 aattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |  |||| |||          |||||||||||||||| ||||||||| | |||||| |||||||||| ||||||    
T  6446 atctttggtcc----------ttttgaccggtcaatgtctacgtggcgtcccacgtatgtaattatttaattaa 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 9126 - 8998
Alignment:
Q  241 ggctaaagtgca-tttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    |||||||||||| |||||||||| |||||||  ||||| |||  ||||| |||||||| ||| | ||||||||||||||| |||| |||| |||||||      
T  9126 ggctaaagtgcactttttcctcc-ttaatttc-aaaaagttgtgatttttgcctcctatgtacaaaaactacaattttgg-cccctaagatttagccctc 9030  T
Q  340 ttgcaattttgatcctttttatcaattttgac 371  Q
     ||||  |||||||||||| | ||||||||||    
T  9029 atgcatctttgatccttttgaccaattttgac 8998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 417
Target Start/End: Original strand, 23080 - 23255
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagcccct 339  Q
    ||||||||||||| |||||| ||  ||| ||| ||||||||||||||||| ||  |||||||   |||| ||||| |||  |||| |||  ||||||||     
T  23080 tggctaaagtgcacttttccccc--taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagcccca 23177  T
Q  340 ttgcaattttgatcctttttatcaattttgaccggtcaatgcctacgtggcatgccacgtgtgtaattattgaattaa 417  Q
    |||||| ||| ||| ||||  ||||||||||| |||||| ||||| |||  | ||||||||| | ||| |||||||||    
T  23178 ttgcaaattttatcattttgctcaattttgactggtcaaagcctatgtgatacgccacgtgtatgattgttgaattaa 23255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 2564 - 2435
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||||| |||| | |||  ||||||||||||||||| || |||||||| | |||| || |||||||||||| | || |||||  | ||    
T  2564 gctaaagtgcacttttcc-ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 2466  T
Q  342 gcaattttgatcctttttatcaattttgacc 372  Q
    |||| ||| ||||||||  ||||||||||||    
T  2465 gcaaatttcatccttttggtcaattttgacc 2435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 372
Target Start/End: Complemental strand, 7187 - 7058
Alignment:
Q  242 gctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccccaagaattagccccttt 341  Q
    ||||||||||| |||||| |||| | |||  ||||||||||||||||| || |||||||| | |||| || |||||||||||| | || |||||  | ||    
T  7187 gctaaagtgcacttttcc-ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 7089  T
Q  342 gcaattttgatcctttttatcaattttgacc 372  Q
    |||| ||| ||||||||  ||||||||||||    
T  7088 gcaaatttcatccttttggtcaattttgacc 7058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 221 - 137
Alignment:
Q  240 tggctaaagtgcatttttcctcccttaatttttaaaaacttgcaattttggcctcctaagtatagaaactacaattttggccccc 324  Q
    ||||||||||||| |||||| ||| ||| ||| ||||  |||| ||||||||| || | ||||  |||| |||||||||||||||    
T  221 tggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccc 137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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