View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13997_high_10 (Length: 346)

Name: NF13997_high_10
Description: NF13997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13997_high_10
NF13997_high_10
[»] chr5 (43 HSPs)
chr5 (2-100)||(30284619-30284716)
chr5 (9-113)||(33829749-33829852)
chr5 (2-100)||(26691625-26691722)
chr5 (2-100)||(26716282-26716379)
chr5 (2-100)||(26961357-26961454)
chr5 (2-100)||(26986022-26986119)
chr5 (9-109)||(32707850-32707949)
chr5 (9-109)||(41392731-41392830)
chr5 (9-109)||(39690782-39690881)
chr5 (2-100)||(17138266-17138362)
chr5 (9-114)||(30777541-30777645)
chr5 (9-109)||(1639801-1639900)
chr5 (2-109)||(1795392-1795498)
chr5 (9-109)||(10656820-10656919)
chr5 (10-109)||(30918378-30918476)
chr5 (6-100)||(11906227-11906320)
chr5 (2-100)||(34032378-34032475)
chr5 (2-99)||(3934800-3934896)
chr5 (6-115)||(21251459-21251567)
chr5 (2-99)||(42366115-42366211)
chr5 (9-109)||(9792319-9792418)
chr5 (9-109)||(22774554-22774653)
chr5 (9-100)||(32728728-32728818)
chr5 (10-100)||(35746271-35746360)
chr5 (10-100)||(41233388-41233477)
chr5 (49-109)||(12852119-12852179)
chr5 (9-109)||(32624877-32624976)
chr5 (2-92)||(5722004-5722093)
chr5 (2-74)||(3701233-3701304)
chr5 (2-81)||(1920864-1920942)
chr5 (2-109)||(5612454-5612560)
chr5 (6-100)||(14836390-14836483)
chr5 (10-99)||(15066148-15066236)
chr5 (49-114)||(26795051-26795116)
chr5 (2-42)||(7629125-7629165)
chr5 (7-42)||(17138202-17138237)
chr5 (7-40)||(26716410-26716443)
chr5 (7-40)||(26986150-26986183)
chr5 (2-63)||(43357771-43357831)
chr5 (49-100)||(6243216-6243267)
chr5 (7-42)||(25749741-25749776)
chr5 (7-40)||(27938296-27938329)
chr5 (7-39)||(42366055-42366087)
[»] chr8 (40 HSPs)
chr8 (9-115)||(13422202-13422307)
chr8 (2-109)||(27886190-27886296)
chr8 (2-109)||(27944848-27944954)
chr8 (9-109)||(2872929-2873028)
chr8 (9-109)||(4245940-4246039)
chr8 (2-111)||(27968101-27968211)
chr8 (2-111)||(28025087-28025197)
chr8 (9-100)||(32759382-32759472)
chr8 (2-100)||(32424930-32425027)
chr8 (2-100)||(37372268-37372365)
chr8 (9-109)||(22201356-22201455)
chr8 (9-109)||(32877437-32877536)
chr8 (9-116)||(12580572-12580678)
chr8 (10-109)||(34901402-34901500)
chr8 (9-109)||(6028487-6028586)
chr8 (9-109)||(16384617-16384716)
chr8 (9-109)||(36483435-36483534)
chr8 (9-109)||(28876585-28876684)
chr8 (9-100)||(43771723-43771813)
chr8 (2-100)||(5818323-5818420)
chr8 (9-99)||(25022135-25022224)
chr8 (9-100)||(19948015-19948105)
chr8 (2-109)||(29355623-29355729)
chr8 (2-109)||(23265649-23265755)
chr8 (26-100)||(19436283-19436356)
chr8 (26-100)||(19572432-19572505)
chr8 (36-100)||(32638902-32638965)
chr8 (2-100)||(20182383-20182479)
chr8 (26-100)||(37668591-37668664)
chr8 (2-100)||(38388676-38388773)
chr8 (9-109)||(45217239-45217338)
chr8 (47-115)||(12357883-12357950)
chr8 (47-115)||(12359011-12359078)
chr8 (7-42)||(3892099-3892134)
chr8 (6-101)||(30804761-30804855)
chr8 (52-99)||(40412445-40412492)
chr8 (7-40)||(32425058-32425091)
chr8 (7-40)||(37372397-37372430)
chr8 (2-42)||(10349310-10349350)
chr8 (2-46)||(24100205-24100249)
[»] chr1 (45 HSPs)
chr1 (7-100)||(2472871-2472963)
chr1 (9-113)||(20409573-20409676)
chr1 (2-99)||(29167957-29168053)
chr1 (9-109)||(1043227-1043326)
chr1 (10-114)||(6916894-6916997)
chr1 (9-109)||(28949260-28949359)
chr1 (9-109)||(37346867-37346966)
chr1 (9-109)||(43189655-43189754)
chr1 (2-109)||(9781642-9781748)
chr1 (10-109)||(38330427-38330525)
chr1 (10-109)||(52895733-52895831)
chr1 (9-99)||(1036469-1036558)
chr1 (9-109)||(37104120-37104219)
chr1 (9-100)||(8132192-8132282)
chr1 (2-109)||(14167084-14167190)
chr1 (2-100)||(34432395-34432492)
chr1 (2-112)||(40775992-40776101)
chr1 (2-103)||(2364683-2364783)
chr1 (2-100)||(32381071-32381168)
chr1 (9-100)||(5984236-5984326)
chr1 (2-100)||(10822411-10822509)
chr1 (21-100)||(38948741-38948819)
chr1 (6-100)||(3708295-3708388)
chr1 (9-99)||(13013011-13013100)
chr1 (2-100)||(48715237-48715334)
chr1 (11-100)||(25256625-25256713)
chr1 (36-109)||(36367738-36367810)
chr1 (9-109)||(3426848-3426947)
chr1 (9-101)||(28659319-28659410)
chr1 (9-109)||(31653421-31653520)
chr1 (9-100)||(30323724-30323814)
chr1 (2-112)||(2222991-2223100)
chr1 (1-109)||(29861801-29861908)
chr1 (2-95)||(9528851-9528943)
chr1 (2-100)||(10763670-10763765)
chr1 (65-100)||(24849373-24849408)
chr1 (2-109)||(34096564-34096670)
chr1 (2-92)||(41676001-41676090)
chr1 (7-42)||(9528791-9528826)
chr1 (7-40)||(9781779-9781812)
chr1 (7-40)||(24851611-24851644)
chr1 (7-40)||(33039749-33039782)
chr1 (2-30)||(9092505-9092533)
chr1 (60-100)||(38218407-38218447)
chr1 (7-39)||(41675937-41675969)
[»] chr2 (49 HSPs)
chr2 (9-100)||(4170521-4170611)
chr2 (2-109)||(35342317-35342423)
chr2 (2-115)||(37134310-37134422)
chr2 (9-109)||(6497668-6497767)
chr2 (9-109)||(7876714-7876813)
chr2 (9-109)||(38602341-38602440)
chr2 (9-109)||(40308916-40309015)
chr2 (9-109)||(22570937-22571036)
chr2 (9-109)||(33324818-33324917)
chr2 (9-109)||(16561800-16561899)
chr2 (2-115)||(43214566-43214680)
chr2 (2-109)||(28746664-28746770)
chr2 (2-100)||(2319284-2319381)
chr2 (2-100)||(4355334-4355431)
chr2 (2-100)||(34146189-34146286)
chr2 (2-100)||(44156606-44156703)
chr2 (2-107)||(8482929-8483033)
chr2 (2-100)||(1005522-1005618)
chr2 (2-99)||(4561798-4561894)
chr2 (2-111)||(24585528-24585635)
chr2 (9-109)||(18300972-18301071)
chr2 (9-109)||(22484267-22484366)
chr2 (2-109)||(31236198-31236304)
chr2 (2-112)||(25933562-25933671)
chr2 (2-92)||(40497397-40497486)
chr2 (2-109)||(1776448-1776554)
chr2 (10-100)||(14217174-14217263)
chr2 (2-99)||(21104492-21104588)
chr2 (9-109)||(7807393-7807492)
chr2 (49-109)||(20536775-20536835)
chr2 (2-42)||(3563906-3563946)
chr2 (9-109)||(6124173-6124272)
chr2 (2-100)||(3545593-3545690)
chr2 (47-109)||(14824148-14824210)
chr2 (2-100)||(35996652-35996749)
chr2 (7-42)||(4561924-4561959)
chr2 (9-100)||(5588116-5588206)
chr2 (7-42)||(35342453-35342488)
chr2 (7-40)||(14217098-14217131)
chr2 (2-98)||(12206036-12206131)
chr2 (7-42)||(3563975-3564010)
chr2 (1-36)||(15880510-15880545)
chr2 (10-40)||(31236137-31236167)
chr2 (47-109)||(45159354-45159416)
chr2 (7-40)||(2319412-2319445)
chr2 (54-111)||(3563849-3563906)
chr2 (56-109)||(12819301-12819354)
chr2 (7-40)||(14824276-14824309)
chr2 (7-40)||(34146317-34146350)
[»] chr4 (44 HSPs)
chr4 (9-115)||(52721259-52721363)
chr4 (9-100)||(19738706-19738796)
chr4 (9-126)||(5834813-5834929)
chr4 (9-109)||(52122888-52122987)
chr4 (10-109)||(8064129-8064227)
chr4 (2-100)||(46431945-46432042)
chr4 (9-109)||(5325740-5325839)
chr4 (9-109)||(42472588-42472687)
chr4 (2-109)||(40694070-40694176)
chr4 (6-109)||(1176981-1177083)
chr4 (2-109)||(2586336-2586442)
chr4 (2-100)||(17892257-17892354)
chr4 (2-100)||(55901151-55901248)
chr4 (9-109)||(41145612-41145711)
chr4 (2-109)||(21637665-21637771)
chr4 (2-109)||(36511946-36512052)
chr4 (2-109)||(47607110-47607215)
chr4 (7-113)||(51858828-51858933)
chr4 (49-114)||(14795018-14795083)
chr4 (2-102)||(27981903-27982002)
chr4 (36-112)||(38492305-38492380)
chr4 (9-109)||(53322337-53322436)
chr4 (2-99)||(21058843-21058939)
chr4 (9-109)||(28376996-28377095)
chr4 (7-98)||(44521994-44522084)
chr4 (47-99)||(3403631-3403683)
chr4 (2-98)||(37992545-37992640)
chr4 (49-100)||(51674867-51674918)
chr4 (10-104)||(4400473-4400566)
chr4 (27-109)||(44121879-44121960)
chr4 (7-40)||(31946174-31946207)
chr4 (7-40)||(51858932-51858965)
chr4 (7-42)||(24793679-24793714)
chr4 (49-100)||(31946263-31946314)
chr4 (7-42)||(47607248-47607283)
chr4 (2-64)||(24793743-24793804)
chr4 (7-40)||(1177114-1177147)
chr4 (9-42)||(40694205-40694238)
chr4 (10-39)||(49470419-49470448)
chr4 (7-39)||(726504-726536)
chr4 (7-39)||(754308-754340)
chr4 (9-41)||(17892384-17892416)
chr4 (10-42)||(36943804-36943836)
chr4 (40-112)||(52572207-52572278)
[»] chr3 (62 HSPs)
chr3 (2-112)||(6134394-6134503)
chr3 (9-109)||(35389750-35389849)
chr3 (10-109)||(29915861-29915959)
chr3 (10-109)||(29965014-29965112)
chr3 (9-115)||(7327706-7327811)
chr3 (2-100)||(22289733-22289830)
chr3 (9-109)||(1679717-1679816)
chr3 (9-109)||(40497330-40497429)
chr3 (9-112)||(48122822-48122924)
chr3 (2-109)||(55269028-55269130)
chr3 (2-109)||(13748459-13748565)
chr3 (2-100)||(28968519-28968616)
chr3 (9-114)||(37996830-37996934)
chr3 (6-99)||(42229684-42229776)
chr3 (21-109)||(22310705-22310792)
chr3 (9-109)||(42464926-42465025)
chr3 (9-100)||(28882697-28882787)
chr3 (2-109)||(30226420-30226526)
chr3 (2-100)||(41742084-41742181)
chr3 (6-100)||(52684210-52684303)
chr3 (2-109)||(2122704-2122813)
chr3 (2-109)||(30787574-30787680)
chr3 (2-109)||(38889092-38889197)
chr3 (2-100)||(983203-983300)
chr3 (2-91)||(3983715-3983803)
chr3 (2-75)||(25700794-25700866)
chr3 (9-114)||(52121175-52121279)
chr3 (2-60)||(19421465-19421522)
chr3 (10-109)||(28704727-28704825)
chr3 (36-115)||(53192492-53192570)
chr3 (2-100)||(7899731-7899828)
chr3 (49-99)||(19879151-19879201)
chr3 (36-109)||(22611420-22611492)
chr3 (2-112)||(5271476-5271575)
chr3 (2-109)||(21157741-21157847)
chr3 (49-100)||(47642026-47642077)
chr3 (10-100)||(25937084-25937173)
chr3 (2-100)||(45347308-45347403)
chr3 (49-114)||(10225209-10225274)
chr3 (53-109)||(19420905-19420961)
chr3 (9-109)||(52505852-52505950)
chr3 (7-42)||(13353143-13353178)
chr3 (7-42)||(47642141-47642176)
chr3 (2-100)||(20510168-20510265)
chr3 (9-63)||(33239996-33240049)
chr3 (7-40)||(25700898-25700931)
chr3 (4-100)||(28548095-28548187)
chr3 (49-109)||(2567445-2567505)
chr3 (11-63)||(45057253-45057304)
chr3 (7-42)||(39664091-39664126)
chr3 (7-38)||(41742020-41742051)
chr3 (2-41)||(48333147-48333186)
chr3 (36-114)||(1528497-1528574)
chr3 (7-41)||(38889034-38889068)
chr3 (2-68)||(39663999-39664064)
chr3 (2-40)||(47642074-47642112)
chr3 (49-99)||(49419245-49419295)
chr3 (9-62)||(45532999-45533051)
chr3 (49-98)||(47750948-47750997)
chr3 (12-40)||(28968647-28968675)
chr3 (7-39)||(30787509-30787541)
chr3 (2-42)||(48334089-48334129)
[»] chr7 (55 HSPs)
chr7 (9-109)||(11829686-11829785)
chr7 (9-114)||(27353913-27354017)
chr7 (9-109)||(25969394-25969493)
chr7 (9-101)||(34122636-34122727)
chr7 (10-114)||(40095642-40095745)
chr7 (9-109)||(48163405-48163504)
chr7 (9-112)||(1043090-1043192)
chr7 (2-100)||(35159871-35159968)
chr7 (9-98)||(9250441-9250529)
chr7 (10-109)||(11058349-11058447)
chr7 (152-283)||(3686500-3686634)
chr7 (2-99)||(21409398-21409494)
chr7 (7-100)||(23079057-23079149)
chr7 (2-103)||(24956254-24956354)
chr7 (9-109)||(34238155-34238254)
chr7 (2-92)||(23311736-23311825)
chr7 (2-100)||(44960147-44960244)
chr7 (9-109)||(26773731-26773830)
chr7 (9-109)||(27555388-27555487)
chr7 (9-109)||(38262996-38263095)
chr7 (49-116)||(16564416-16564483)
chr7 (49-116)||(16601179-16601246)
chr7 (2-109)||(33454067-33454173)
chr7 (6-112)||(1363028-1363133)
chr7 (2-108)||(18113951-18114055)
chr7 (21-109)||(4291509-4291596)
chr7 (9-100)||(26845915-26846005)
chr7 (49-109)||(39520797-39520857)
chr7 (49-109)||(42896999-42897059)
chr7 (2-109)||(38064592-38064698)
chr7 (9-115)||(27398066-27398171)
chr7 (50-100)||(36202837-36202887)
chr7 (2-100)||(40041385-40041482)
chr7 (2-100)||(44269732-44269828)
chr7 (9-109)||(16850783-16850882)
chr7 (2-112)||(23970138-23970247)
chr7 (2-99)||(8056346-8056438)
chr7 (7-42)||(1400216-1400251)
chr7 (9-100)||(19510529-19510619)
chr7 (36-109)||(554926-554998)
chr7 (7-39)||(36757964-36757996)
chr7 (7-39)||(36767488-36767520)
chr7 (9-63)||(8028740-8028793)
chr7 (2-40)||(19820876-19820914)
chr7 (10-40)||(21179970-21180000)
chr7 (7-40)||(554838-554871)
chr7 (7-40)||(15878372-15878405)
chr7 (7-40)||(23970074-23970107)
chr7 (7-40)||(40041512-40041545)
chr7 (7-95)||(2908256-2908343)
chr7 (2-30)||(7416689-7416717)
chr7 (2-42)||(26973116-26973156)
chr7 (2-42)||(38064729-38064768)
chr7 (49-109)||(47238665-47238725)
chr7 (6-38)||(47720188-47720220)
[»] chr6 (24 HSPs)
chr6 (2-115)||(234300-234412)
chr6 (9-109)||(8356958-8357057)
chr6 (10-109)||(1036846-1036944)
chr6 (9-99)||(31195888-31195977)
chr6 (9-115)||(7188798-7188900)
chr6 (11-109)||(3299141-3299238)
chr6 (2-100)||(13607797-13607894)
chr6 (2-109)||(26327155-26327260)
chr6 (2-109)||(27083985-27084091)
chr6 (9-109)||(3212477-3212576)
chr6 (11-100)||(32017986-32018074)
chr6 (9-109)||(32130678-32130777)
chr6 (2-99)||(19128163-19128259)
chr6 (2-109)||(6708053-6708159)
chr6 (9-100)||(25834515-25834605)
chr6 (10-100)||(13061325-13061414)
chr6 (36-109)||(10894619-10894690)
chr6 (2-42)||(31079737-31079777)
chr6 (7-42)||(7255056-7255091)
chr6 (47-109)||(29892966-29893028)
chr6 (49-100)||(31079621-31079672)
chr6 (2-32)||(10894533-10894563)
chr6 (67-113)||(31741232-31741278)
chr6 (7-40)||(19128290-19128323)
[»] scaffold0640 (1 HSPs)
scaffold0640 (9-109)||(8111-8210)
[»] scaffold0250 (1 HSPs)
scaffold0250 (9-100)||(5521-5611)
[»] scaffold0285 (1 HSPs)
scaffold0285 (2-100)||(13259-13356)
[»] scaffold0240 (1 HSPs)
scaffold0240 (2-109)||(10600-10706)
[»] scaffold0037 (1 HSPs)
scaffold0037 (49-115)||(27839-27905)
[»] scaffold0060 (1 HSPs)
scaffold0060 (9-109)||(30463-30562)
[»] scaffold0005 (1 HSPs)
scaffold0005 (49-114)||(44648-44713)
[»] scaffold0112 (1 HSPs)
scaffold0112 (49-109)||(42123-42183)
[»] scaffold0177 (1 HSPs)
scaffold0177 (49-116)||(25588-25655)
[»] scaffold0406 (1 HSPs)
scaffold0406 (54-109)||(13866-13921)


Alignment Details
Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 30284619 - 30284716
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  30284619 aatcttcggatactctcctgatacgtatcgggaagtatcaggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 30284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 33829852 - 33829749
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  33829852 ggatactctccggatacgtatcgggaagtatcaggcatg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 33829754  T
Q  109 agagc 113  Q
    |||||    
T  33829753 agagc 33829749  T

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Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26691722 - 26691625
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  26691722 aatcttcggatactctcttgatacgtatcgggaagtatcagacagg-tatcggtgcagaatacgcaggggatacgatacgtcatctattttgaagtatc 26691625  T

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Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26716379 - 26716282
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||||||||||||    
T  26716379 aatcttcggatactcttctgatacgtatcgggaagtatcaggcagg-tatcggtgtaggatacgcaggggatacgatacgtcatccattttgaagtatc 26716282  T

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Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26961454 - 26961357
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  26961454 aatcttcggatactctcttgatacgtatcgggaagtatcagacagg-tatcggtgcagaatacgcaggggatacgatacgtcatctattttgaagtatc 26961357  T

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Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26986119 - 26986022
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||||||||||||    
T  26986119 aatcttcggatactcttctgatacgtatcgggaagtatcaggcagg-tatcggtgtaggatacgcaggggatacgatacgtcatccattttgaagtatc 26986022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32707850 - 32707949
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  32707850 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 32707948  T

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Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 41392731 - 41392830
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||| || ||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  41392731 ggatactccccggatacatatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatctggacttc 41392829  T

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Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 39690782 - 39690881
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  39690782 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 39690880  T

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Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 17138266 - 17138362
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  17138266 aatcttcggatattctcctgatacgtatcgggaagtatcaggca-attatcggtgcaggatacgcaggggatac-atacgtcatctattttgaagtatc 17138362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 30777541 - 30777645
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||| ||||||||| ||||||||||||| || ||||    
T  30777541 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaagggatacgatacgtcatccattttgaagtatcggggcttc 30777639  T
Q  109 agagct 114  Q
    | ||||    
T  30777640 acagct 30777645  T

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Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 1639801 - 1639900
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  1639801 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 1639899  T

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Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 1795498 - 1795392
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| | |||||||||| ||||||| | |||||||||||||     
T  1795498 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacggaggggatacgatacgtcaaccattttgaagtatcg 1795400  T
Q  102 ggacttca 109  Q
    || |||||    
T  1795399 gggcttca 1795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 10656919 - 10656820
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| || ||||    
T  10656919 ggatactctcccgatacgtatcgagaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcggggcttc 10656821  T

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Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 30918476 - 30918378
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||  ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||  ||||||||| ||||||||||||| || |||||    
T  30918476 gatactctccgaatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacaatacgtcatccattttgaagtatcggggcttca 30918378  T

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Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 11906320 - 11906227
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||| |||||| ||||  ||||||||| |||||||||||||    
T  11906320 ttcggatactctccggatacgtatcgggaagtatcggacag-atatcggtgcaggatacgcagggaatacaatacgtcatccattttgaagtatc 11906227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34032475 - 34032378
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||  | |||| ||| ||||| || ||| |||||||||||||||||||    
T  34032475 aatcttcggatactctcctgatacgtatcgggaagtatcaagcagg-tatcggtagatgatacgcaagggattcgatacatcatctattttgaagtatc 34032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 3934800 - 3934896
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||| ||||||||||   ||||||||| ||||| ||||||    
T  3934800 aatcttcggatactctcctgatacgtatcggtaagtatcaggtagg-tatcggtgcgggatacgcaggggatataatacgtcatccattttaaagtat 3934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 21251567 - 21251459
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||| ||||||| ||| | ||| |||||||||||||||| ||||| | ||||| ||||    
T  21251567 ttcggatactctcctgatacgtatcggaaagtatcagaca-gatattggtgcagaataagtaggagatacggtacgtcatccattttaatgtatcaggac 21251469  T
Q  106 ttcagagctt 115  Q
    |||| |||||    
T  21251468 ttcatagctt 21251459  T

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Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 42366115 - 42366211
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||| |||||||||| |||| ||||| |||| |||||| |||| |||||||||| ||||||||||| |||| ||||||||||||||||||    
T  42366115 aatcttcggatattctcctgataggtattgggaaatatcgggcagg-tatcagtgcaggatacgcaggggatacagtacatcatctattttgaagtat 42366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 9792418 - 9792319
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  |||||||||||||||||||| |||||| ||||| |||||||||  ||||||||||||||||||||| ||||| ||||||| || ||||    
T  9792418 ggatactctctggatacgtatcgggaagtatcgggcagg-tatcgatgcaggatacacaggggatacggtacgtcatccattttaaagtatcggggcttc 9792320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22774653 - 22774554
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||| || | ||||| |||||||  ||||||    
T  22774653 ggatactctctcgatacgtatcggaaagtatcgggcag-atatcggtgcaggatatgcaggggatacgatacgccaaccattttaaagtatcgagacttc 22774555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 32728728 - 32728818
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||| |||||||||||  ||| ||||| |||||||||||||    
T  32728728 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcgatgcaagatacgcaggggatacaatacatcatcaattttgaagtatc 32728818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 35746271 - 35746360
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| |||| |||| | ||| |||||  |||||||||||||||||||||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcagg-tatcgatgcatgatacgtaggagatacaatacgtcatctattttgaagtatc 35746360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 41233477 - 41233388
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||| || | ||||| ||||||||| | |||  ||||| ||||||||| |||||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatg-tatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 12852179 - 12852119
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  12852179 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 12852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 32624976 - 32624877
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| |  ||||||||||||||||||| |||||| ||||| |||| ||||  ||||||||||||||||||||| |||||||| |||| || ||||    
T  32624976 ggatactcttcgaatacgtatcgggaagtatcgggcagg-tatcgatgcaagatacacaggggatacggtacgtcatccattttgaaatatcggggcttc 32624878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 5722093 - 5722004
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||||||||||| |||||||| |||| | |||||||| |||| | |||| |||||||||| |||||||||||| ||||||||| |||||    
T  5722093 aatcttcggatactttcctgatatgtattgagaagtatcgggcatg-tatcagtgcaggatacgcaggggatacgatacgtcatcaatttt 5722004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 3701304 - 3701233
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggata 74  Q
    ||||||| ||||||||||||| || |||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  3701304 aatcttcagatactctcctgaaacatatcaggaagtatcagaca-gatatcggtgcaggatacgcaggggata 3701233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 1920942 - 1920864
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacg 81  Q
    ||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||| |||| |||  |||||| |||||    
T  1920942 aatcttcggatactctcccaatacgtatcgggaagtatcatgca-gatatcggtgcatgatacgcaatggataccgtacg 1920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 5612454 - 5612560
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||| |||||||| | ||||||| |||| | ||||  ||||||||   ||| | ||||| ||||||||| ||||||||||||||    
T  5612454 aatcttcggatactctcctggtacgtatcagaaagtatcgggca-gttatcaatgcaggatgcacagagaatacgatacgtcatccattttgaagtatct 5612552  T
Q  102 ggacttca 109  Q
    || |||||    
T  5612553 gggcttca 5612560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 14836483 - 14836390
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||| |||||||||||||| || |||| | ||  |||||| ||||||||| |||||||||||  ||||||| | |||||||||||||    
T  14836483 ttcggatactcttctgatacgtatcggaaaatatcggacaa-atatcgatgcaggatacgcaggggatacaatacgtcaaccattttgaagtatc 14836390  T

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Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 15066236 - 15066148
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||| | |||||||||||| || |||| ||||| |||||||||||| |||  || |||||||| ||| ||||||||||||||||||    
T  15066236 gatactcttccgatacgtatcggaaaatatcgggcag-atatcggtgcagaatacacatgggatacgatacatcatctattttgaagtat 15066148  T

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Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 26795051 - 26795116
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| || ||||| ||||    
T  26795051 tatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcagggcttcacagct 26795116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 7629165 - 7629125
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  7629165 aatcttcagatactctcctgatacgtatcgggaagtatcag 7629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 17138202 - 17138237
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  17138202 tcggatactctcctgatacgtatcgggaagtatcag 17138237  T

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Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 26716443 - 26716410
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  26716443 tcggatactctcctgatacgtatcgggaagtatc 26716410  T

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Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 26986183 - 26986150
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  26986183 tcggatactctcctgatacgtatcgggaagtatc 26986150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 43357771 - 43357831
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    ||||||||||||||||  | ||||||||||| ||||||||| |||| |||||||||||||||    
T  43357771 aatcttcggatactcttttaatacgtatcggaaagtatcagacagg-tatcggtgcaggata 43357831  T

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Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 6243216 - 6243267
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| |||| ||||||  ||||||||| |||||||||||||    
T  6243216 tatcggtgcaggatacgcagaggatacaatacgtcatccattttgaagtatc 6243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 25749776 - 25749741
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||||||||||||||| |||||||||    
T  25749776 tcggatactctcctgatacgtatcggaaagtatcag 25749741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 27938329 - 27938296
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||| ||||||||||    
T  27938329 tcggatactctcctgatacgtattgggaagtatc 27938296  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 42366055 - 42366087
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    ||||||||||||||||||| |||||||||||||    
T  42366055 tcggatactctcctgatacatatcgggaagtat 42366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 13422307 - 13422202
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||    
T  13422307 ggatactctccgtatacgtatcgggaagtatcaggcagg-tatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttc 13422209  T
Q  109 agagctt 115  Q
    | |||||    
T  13422208 acagctt 13422202  T

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Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 27886296 - 27886190
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||     
T  27886296 aatcttcggatactctcctgatacgtatcgggaagtatcaaccagg-tatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtatcg 27886198  T
Q  102 ggacttca 109  Q
    ||||||||    
T  27886197 ggacttca 27886190  T

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Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 27944954 - 27944848
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||     
T  27944954 aatcttcggatactctcctgatacgtatcgggaagtatcaaccagg-tatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtatcg 27944856  T
Q  102 ggacttca 109  Q
    ||||||||    
T  27944855 ggacttca 27944848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 2872929 - 2873028
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  2872929 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 2873027  T

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Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 4246039 - 4245940
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||    
T  4246039 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagcatcggggcttc 4245941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 27968211 - 27968101
Alignment:
Q  2 aatcttcggatac--tctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  27968211 aatcttcggatacgatctcctgatacgtatcgggaagtatcagccagg-tatcggtgcaggatatgcagggaatacaatacgtcatctatttttaagtat 27968113  T
Q  100 ctggacttcaga 111  Q
    | ||||||||||    
T  27968112 cgggacttcaga 27968101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 28025197 - 28025087
Alignment:
Q  2 aatcttcggatac--tctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  28025197 aatcttcggatacgatctcctgatacgtatcgggaagtatcagccagg-tatcggtgcaggatatgcagggaatacaatacgtcatctatttttaagtat 28025099  T
Q  100 ctggacttcaga 111  Q
    | ||||||||||    
T  28025098 cgggacttcaga 28025087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 32759472 - 32759382
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  32759472 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32759382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 32425027 - 32424930
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  32425027 aatcttcggatactcttctgatacgtatcgtgaagtatcagacagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 32424930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 37372365 - 37372268
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  37372365 aatcttcggatactctcctgatacgtatcgggaagtatcagacagg-tatcagtgcaggatacgcaggagatacgatacgtcatccattttgaagtatc 37372268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 22201356 - 22201455
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||    
T  22201356 ggatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcgggacttc 22201454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 32877536 - 32877437
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  32877536 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 32877438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 12580572 - 12580678
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||| |||||||||| ||||||||||||||||||| || ||||    
T  12580572 ggatactctccggatacgtatcgggaagtatcagacagt-tatcggtgcaggatacgcaggagatacggtacatcatctattttgaagtatcggggcttc 12580670  T
Q  109 agagcttt 116  Q
    | ||||||    
T  12580671 acagcttt 12580678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 34901402 - 34901500
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  34901402 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 34901500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 6028586 - 6028487
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||| ||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  6028586 ggatactctcccgatatgtatcggaaagtatcgggcag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 6028488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 16384716 - 16384617
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||| || ||||    
T  16384716 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatactcaggggatacggtacgtcatccattttgaagtatcggggcttc 16384618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 36483534 - 36483435
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  36483534 ggatactcttcggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 36483436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 28876585 - 28876684
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  ||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  28876585 ggatactctctggatacgtatcgagaagtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 28876683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 43771723 - 43771813
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||| ||||||||| | || | ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  43771723 ggatactctccggatacgtatcaggaagtatcggacatg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 43771813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 5818323 - 5818420
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||| ||| | |||||| ||||||||| |||||||||||||    
T  5818323 aatcttcagatactctcctgatacatatcgggaaatatcatgcagg-tatcggtgcaggatacgcaagtgatacgatacgtcatccattttgaagtatc 5818420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 25022224 - 25022135
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| ||||| ||||||||| |||||| ||||||||||||    
T  25022224 ggatactctcccgatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggagatacggtatgtcatccattttgaagtat 25022135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 19948015 - 19948105
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| | ||||||||||||||||||  ||||| ||||||||||||||| |||||||||| | ||||||||| |||||||||||||    
T  19948015 ggatactctcccggtacgtatcgggaagtatcgagcagg-tatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtatc 19948105  T

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Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 29355729 - 29355623
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| | ||||| |||||||||  ||||||||| | || |||||| |||||||||||||     
T  29355729 aatcttcggatactctcctgctacgtatcgggaagtatcaagca-gctatcgatgcaggatacccaggggatatgatatgtcatccattttgaagtatca 29355631  T
Q  102 ggacttca 109  Q
    || |||||    
T  29355630 gggcttca 29355623  T

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Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 23265755 - 23265649
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||||||| |||  | || |||||| |||||| ||| ||||| ||||||||| ||| |||||||| |||||| |    
T  23265755 aatcttcggatactctcctgatacgtatcgggaaatattggaca-gatatcagtgcagaatacgcaggagatacggtatgtcgtctattttaaagtattt 23265657  T
Q  102 ggacttca 109  Q
    || |||||    
T  23265656 gggcttca 23265649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 19436356 - 19436283
Alignment:
Q  26 gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| | |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  19436356 gtatcgggaagtatcggtcagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 19436283  T

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Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 19572505 - 19572432
Alignment:
Q  26 gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| | |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  19572505 gtatcgggaagtatcggtcagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 19572432  T

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Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 32638902 - 32638965
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  32638902 gtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32638965  T

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Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 20182479 - 20182383
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||| |||||||||||||  ||||||||| ||| |||| | ||||||||||||| ||||||| |||||||||| || ||||||||||    
T  20182479 aatcttcagatactctactgatacgtatcgaaaagtatcagacag-atatag-tgcaggatatgcacgggataccgtacgtcatccatcttgaagtatc 20182383  T

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Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 37668664 - 37668591
Alignment:
Q  26 gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| ||| |||| |||||| |||| |||||| ||||||||||||||| |||||||||||||    
T  37668664 gtatcgggaagtatcagacag-atattggtgcaagatacgcagggaatacggtacgtcatccattttgaagtatc 37668591  T

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Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 38388773 - 38388676
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||| |||||| |||||||| |||||||| | |||| ||||||||||||||| |||| ||||||  |||  |||| |||||||||||||    
T  38388773 aatcttcggatactttcctgacacgtatcgagaagtatcggacagg-tatcggtgcaggatacgcagaggatacaatacagcatccattttgaagtatc 38388676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 45217239 - 45217338
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| || |||| | |||| ||||||||||||||| |||||||||||  ||  ||||| ||||| ||||||| || ||||    
T  45217239 ggatactctccggatacgtatcggaaaatatcggacagg-tatcggtgcaggatacgcaggggatacaatatatcatccattttaaagtatcggggcttc 45217337  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 12357950 - 12357883
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||||| || ||||| |||||    
T  12357950 gatatcggtgcaggatacacagaggatacg-tacgtcatccattttgaagtatccgggcttcatagctt 12357883  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 12359078 - 12359011
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||||| || ||||| |||||    
T  12359078 gatatcggtgcaggatacacagaggatacg-tacgtcatccattttgaagtatccgggcttcatagctt 12359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 3892134 - 3892099
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3892134 tcggatactctcctgatacgtatcgagaagtatcag 3892099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 30804761 - 30804855
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||| |||||||  |||  |||| | |||| |||| |||||  ||||  ||||||||||||||| || |||||    
T  30804761 ttcggatactctcctgatacgtatcggaaagtatcgagca-aatattgatgcaagatacgcaggatatacaatacgtcatctattttaaattatct 30804855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 40412492 - 40412445
Alignment:
Q  52 cggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  40412492 cggtgcaggatacgcaggggatacgatacatcatccattttgaagtat 40412445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 32425091 - 32425058
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  32425091 tcggatactctcctgatacatatcgggaagtatc 32425058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 37372430 - 37372397
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||| ||||||||||    
T  37372430 tcggatactctcctgatacgtattgggaagtatc 37372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 10349350 - 10349310
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||| |||||| ||||||||||||||| ||||||||||    
T  10349350 aatcttcagatactttcctgatacgtatcgagaagtatcag 10349310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 24100205 - 24100249
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcag 46  Q
    |||||||||||||||||||||||| |||||| || ||||| ||||    
T  24100205 aatcttcggatactctcctgatacatatcggaaaatatcatgcag 24100249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 2472871 - 2472963
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2472871 tcggatactctcctgatacgtatcggaaagtatcaggcagg-taccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatc 2472963  T

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Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 20409573 - 20409676
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  20409573 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 20409671  T
Q  109 agagc 113  Q
    |||||    
T  20409672 agagc 20409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 29168053 - 29167957
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||| | ||||||||| ||||||||||||    
T  29168053 aatcttcggatactctcctgatacgtaacgggaagtatcatgcagg-tatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtat 29167957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 1043326 - 1043227
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  1043326 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttc 1043228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 6916894 - 6916997
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  6916894 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 6916992  T
Q  110 gagct 114  Q
     ||||    
T  6916993 cagct 6916997  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 28949260 - 28949359
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  28949260 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 28949358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 37346867 - 37346966
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||| || |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  37346867 ggatactcccccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 37346965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 43189754 - 43189655
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  43189754 ggatactctcctgatacgtatcgagaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcgggtcttc 43189656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 9781748 - 9781642
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||| ||||||| | |||||||||||||     
T  9781748 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaagtatca 9781650  T
Q  102 ggacttca 109  Q
    || |||||    
T  9781649 gggcttca 9781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 38330525 - 38330427
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  38330525 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 38330427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 52895733 - 52895831
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  52895733 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 52895831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 1036558 - 1036469
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1036558 ggatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 1036469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 37104219 - 37104120
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  37104219 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 37104121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 8132282 - 8132192
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||||||||||||||   || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8132282 ggatactctccggatacgtatcgggaagtatcgaacatg-tatcggtgcaggatacgcaggggatacggtacgtcatctattttgaagtatc 8132192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 14167190 - 14167084
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||| ||||| |||||| || |||||| |||||||||||||     
T  14167190 aatcttcggatactcttctgatacgtatcaggaagtatcagacag-atatcggtgcaggatacgcaggtgatacgataagtcatccattttgaagtatcg 14167092  T
Q  102 ggacttca 109  Q
     |||||||    
T  14167091 agacttca 14167084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 34432395 - 34432492
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||| |||| |||||||||||  ||||||||| |||||||||||||    
T  34432395 aatcttcggatactctcctgatacgtatcaggaagtatcaggca-gataccagtgcatgatacgcaggggatacaatacgtcatccattttgaagtatc 34432492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40776101 - 40775992
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||| |||| ||||||||||| |||||||||||  |||||| || ||||||||||||||    
T  40776101 aatcttcggatactcgcctgatacgtatcgagaagtatcatgcag-atattggtgcaggatacgcaggggatacattacgtcttccattttgaagtatct 40776003  T
Q  102 ggacttcagag 112  Q
    || ||| ||||    
T  40776002 gggctttagag 40775992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 2364783 - 2364683
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||  |||||| ||||| ||||||||| |||||||||| ||||||| ||| ||||||||||||||    
T  2364783 aatcttcggatactcttctgatacgtatcggaaagtattgggcagg-tatcgatgcaggatacgcaggggatatggtacgttatccattttgaagtatct 2364685  T
Q  102 gg 103  Q
    ||    
T  2364684 gg 2364683  T

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Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 32381071 - 32381168
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  |||| |||||| ||||||||||||||||||||  ||||| ||||| |||||||    
T  32381071 aatcttcggatactctcctgatacgtattgggaagtatcagaca-aatattggtgcatgatatgcaggggatacggtatatcatccattttaaagtatc 32381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5984326 - 5984236
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||| ||||||||||| ||| | ||||||||||| ||| ||||||||||| |||||||||| |||||||||||||    
T  5984326 ggatactctccagatacgtattgggaagtatcaagcatg-tatcggtgcagaatacgcaggggatacagtacgtcatccattttgaagtatc 5984236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 10822509 - 10822411
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatc-ggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||| | ||||||||||||||||| || |||||| ||||||||||| |||||| ||| | ||||||||| |||||||||||||    
T  10822509 aatcttcggatactctcctgagatgtatcgggaagtatcagaca-gatatcgggtgcaggatacgcagggaatatgatacgtcatccattttgaagtatc 10822411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 38948819 - 38948741
Alignment:
Q  21 gatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||  ||||| |||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  38948819 gatacgtatcgagaagtattgggcag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatc 38948741  T

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Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 3708295 - 3708388
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||| |||||||||||||||||||||  ||||||| |||| | ||| |||| ||||||||||| ||||||| ||||||||| |||||||||||||    
T  3708295 ttcgaatactctcctgatacgtatcgaaaagtatcgggcatg-tattggtgtaggatatgcagaggatacgatacgtcatccattttgaagtatc 3708388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 13013011 - 13013100
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||||||||||||| |||||| |||| ||||| ||||  ||||||||||| || |||||| ||||||||||||    
T  13013011 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcagtgcatgatacacaggggatacgatatgtcatccattttgaagtat 13013100  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 48715237 - 48715334
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| |||||||||||||||||||||||||||| ||| || |||||||| |||||| ||||| |||||| |||   ||| |||||||||||||    
T  48715237 aatcttcggacactctcctgatacgtatcgggaagtatcgggccgg-tatcggtgtaggatacgcaggagatacgatacaatatccattttgaagtatc 48715334  T

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Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 25256713 - 25256625
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||| |||||||||||||||||||| | |||| ||||||||||| ||| |||| |||||| |||||||||| |||||||| ||||    
T  25256713 atactctccggatacgtatcgggaagtatcggacagg-tatcggtgcagaatacgcagaggatacagtacgtcatccattttgaaatatc 25256625  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 36367738 - 36367810
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  36367738 gtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcaggacttca 36367810  T

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Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 3426947 - 3426848
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| | || | ||||||||||||||| |||||||||||  ||||||||| ||||| ||||||| || ||||    
T  3426947 ggatactctccggatacgtatcaggaagtatcggacatg-tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggggcttc 3426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 28659319 - 28659410
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||| |||||||||||| ||||||| |||| | |||||||||| |||| |||||| |||| |||||||||| ||||| ||||||||    
T  28659319 ggatactctccggatacgtatcggaaagtatcgggcatg-tatcggtgcatgatacgcagggaataccgtacgtcatccattttaaagtatct 28659410  T

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Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 31653421 - 31653520
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||  || |||||||| ||| | ||| ||||||||||||| || ||||    
T  31653421 ggatactctcccgatacgtatcgggaagtatcgggca-gatatcggtgcatgatacacaagggatacgatacattatccattttgaagtatcagggcttc 31653519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 30323814 - 30323724
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||  ||| | ||||| | ||||||| |||||||||||||    
T  30323814 ggatactctccagatacgtatcgggaagtatcgggca-gatatcagtgcaggatacacagagaatacgttgcgtcatccattttgaagtatc 30323724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2222991 - 2223100
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| ||||||||||||||||||||||| || |||||| |||| |||||||| ||||||  || |  ||||| ||| ||||||||||| ||||||||    
T  2222991 aatcttcagatactctcctgatacgtatcggaaaatatcagacagg-tatcggtgtaggatacacatgaaatacgttacatcatctattttaaagtatct 2223089  T
Q  102 ggacttcagag 112  Q
    |  ||||||||    
T  2223090 gagcttcagag 2223100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29861908 - 29861801
Alignment:
Q  1 aaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||| | | |||||| |||| | ||| |||||  ||||||| | |||||||||||||    
T  29861908 aaatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatc 29861810  T
Q  101 tggacttca 109  Q
     || |||||    
T  29861809 ggggcttca 29861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 9528851 - 9528943
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaa 95  Q
    ||||||| |||||| ||| |||||||||||||||||||||  |||| |||||||||| ||||  || |||||||  ||||||||| ||||||||    
T  9528851 aatcttcagatactatcccgatacgtatcgggaagtatcaaacagg-tatcggtgcaagatacacaagggatacaatacgtcatccattttgaa 9528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 10763765 - 10763670
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||   || |||| |||| ||||| ||||||||  |||||||||||||| ||||||| | ||||| |||||||    
T  10763765 aatcttcggatactcttctgatacgtatcaaaaaatatcgggca-gatattggtgcagg--atgcaggggatacgatacgtcaaccattttaaagtatc 10763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 24849408 - 24849373
Alignment:
Q  65 gcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||||||    
T  24849408 gcaggggatacggtacgtcatctattttgaagtatc 24849373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 34096564 - 34096670
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||| ||||| |||||  | |||||||  |||| |||||||||||||||| |||||||||||| |||||||   |||||||| ||||     
T  34096564 aatcttcagatactcttctgatgcgtattagaaagtatcgcgcag-atatcggtgcaggatacgcaggggatacgatacgtcaatcattttgaaatatcg 34096662  T
Q  102 ggacttca 109  Q
    || |||||    
T  34096663 gggcttca 34096670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 41676001 - 41676090
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||||||||||||| |  |||| |||  ||||||||| | |||| |||||||||| |||| ||||| |||||||||||||||| |||||    
T  41676001 aatcttcggatactcttccaatacatattaggaagtatcggacagg-tatcggtgcatgatacgcaggagatacggtacgtcatccatttt 41676090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 9528791 - 9528826
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||| |||||||||||||||||||||    
T  9528791 tcggatactctcctaatacgtatcgggaagtatcag 9528826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 9781812 - 9781779
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  9781812 tcggatactttcctgatacgtatcgggaagtatc 9781779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 24851644 - 24851611
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||| ||||||||||||||||    
T  24851644 tcggatactctcctgatgcgtatcgggaagtatc 24851611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 33039782 - 33039749
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||| |||||||||||||||||||    
T  33039782 tcggatactctcctcatacgtatcgggaagtatc 33039749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 9092505 - 9092533
Alignment:
Q  2 aatcttcggatactctcctgatacgtatc 30  Q
    |||||||||||||||||||||||||||||    
T  9092505 aatcttcggatactctcctgatacgtatc 9092533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 38218447 - 38218407
Alignment:
Q  60 gatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||| ||| |||||||||||||||||| |||||||||||||    
T  38218447 gatacgcaagggatacggtacgtcatccattttgaagtatc 38218407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 41675937 - 41675969
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  41675937 tcggatactctcctgataagtatcgggaagtat 41675969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 4170521 - 4170611
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  4170521 ggatactctccggatacgtatcgggaagtatcaggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 4170611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 35342423 - 35342317
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||     
T  35342423 aatcttcggatactcttttgatacgtatcgggaagtatcaggtagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcg 35342325  T
Q  102 ggacttca 109  Q
    ||||||||    
T  35342324 ggacttca 35342317  T

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Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 37134310 - 37134422
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||  |||||||| |||||||||||||||||||||| |||| ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37134310 aatcttcatatactctcttgatacgtatcgggaagtatcaagcag-atatcagtgcaggatacgcagaggatacggtacgtcatctattttgaagtatct 37134408  T
Q  102 ggacttcagagctt 115  Q
    || ||| |||||||    
T  37134409 gggctttagagctt 37134422  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 6497668 - 6497767
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  6497668 ggatactctccggatacgtatcgggaagaatcagacagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttc 6497766  T

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Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 7876813 - 7876714
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  7876813 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 7876715  T

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Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 38602341 - 38602440
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  38602341 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 38602439  T

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Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 40308916 - 40309015
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||    
T  40308916 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcatgggatacggtacgtcatctattttgaagtatcggggcttc 40309014  T

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Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22571036 - 22570937
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||| || |||||||||| ||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  22571036 ggatactccccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcagaggatacggtacgtcatctattttgaagtatctgggcttc 22570938  T

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Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 33324917 - 33324818
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  33324917 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttc 33324819  T

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Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 16561899 - 16561800
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||| ||| ||| |||||||||||||||||| ||||||||||||| || ||||    
T  16561899 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcagaatacgcaagggatacggtacgtcatccattttgaagtatcggggcttc 16561801  T

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Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 43214680 - 43214566
Alignment:
Q  2 aatcttcggatactctcctgatac--gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||||||||||   ||||||||||||||| | ||| |||||| |||||||||  || |||||||| ||||||||| ||||||||||||    
T  43214680 aatcttcggatactctcctgatatatgtatcgggaagtatcggtcag-atatcgatgcaggatacacatgggatacgatacgtcatccattttgaagtat 43214582  T
Q  100 ctggacttcagagctt 115  Q
    ||||||||||||||||    
T  43214581 ctggacttcagagctt 43214566  T

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Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 28746664 - 28746770
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||| ||||||||||||||| |||||||||||| ||||||| | |||||||||||||     
T  28746664 aatcttcggatactcttctgatacgtatcgaaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaagtatcg 28746762  T
Q  102 ggacttca 109  Q
    || |||||    
T  28746763 gggcttca 28746770  T

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Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 2319381 - 2319284
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| |||||||||||| |||||||||| ||| | |||||||||| |||| |||||||||||| ||||||||| |||||||||||||    
T  2319381 aatcttcggatactcttctgatacgtatcaggaagtatcaagcaag-tatcggtgcaagatacgcaggggatacgatacgtcatccattttgaagtatc 2319284  T

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Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 4355431 - 4355334
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  4355431 aatctttgcatactctcctgatacgtatcgggaagtatcaagcagg-tatcggtgcagaatacgcagggaatacgatacgtcatccattttgaagtatc 4355334  T

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Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34146286 - 34146189
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||  |||||| ||||||||| ||||| |||||||    
T  34146286 aatctttggatactctcctgatacgtatcgggaagtatcaggca-gatatcggtgcagaatacgcagaagatacgatacgtcatccattttaaagtatc 34146189  T

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Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 44156703 - 44156606
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || | ||||| |||| |||| |||||||||||| || |||||| |||||||||||||    
T  44156703 aatcttcggatactctcctgatacgtatcgggaagtatcagacatg-tatcgatgcatgatacgcaggggatacgatatgtcatccattttgaagtatc 44156606  T

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Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 8482929 - 8483033
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||| |||  ||||||| ||||||||  |||||||||||||     
T  8482929 aatcttcggatactcttctgatacgtatcggaaagtatcagaca-gatatcggtgcaggatacgcaaaggatacgatacgtcattcattttgaagtatcg 8483027  T
Q  102 ggactt 107  Q
    ||||||    
T  8483028 ggactt 8483033  T

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Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 1005618 - 1005522
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||| || ||||||||||||||||||| | |||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  1005618 aatcttcagatactcttctaatacgtatcgggaagtatc-gacagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 1005522  T

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Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 4561894 - 4561798
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||  || || ||||| ||||||||| ||||||||||||    
T  4561894 aatcttcggatactcttctgatatgtatcgggaagtatcgggcagg-tatcggtgcaggatacacaaggaatacgatacgtcatccattttgaagtat 4561798  T

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Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 24585635 - 24585528
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||| |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||| ||| |||||||| ||| ||||| |||||||||||||     
T  24585635 aatctttggatacactcctgatacgtatctggaagtatcagacagg-tatcggtgcaggatacgca-gggatacgatacatcatccattttgaagtatcg 24585538  T
Q  102 ggacttcaga 111  Q
    || |||||||    
T  24585537 gggcttcaga 24585528  T

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Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 18301071 - 18300972
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||||||||||| |||  ||||||||||| ||||||||| ||||||||||||| || ||||    
T  18301071 ggatactctcccgatacgtatcgagaagtatcagacagg-tatcggtgcagaatacacaggggatacgatacgtcatccattttgaagtatcagggcttc 18300973  T

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Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22484366 - 22484267
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| | ||| |||||| ||||||||| |||||| ||||||||| ||||| ||||||||||||| || ||||    
T  22484366 ggatactctccggatacgtatcgggaagtatcggacag-atatcgatgcaggatacgcagggaatacggtacatcatccattttgaagtatcggggcttc 22484268  T

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Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 31236198 - 31236304
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| | | ||||||||||| |||||||||||  ||||| ||| ||||| |||||||     
T  31236198 aatcttcggatactctcctgatacgtatcgggaaatatcatgcagg-tgtgggtgcaggatacgcaggggatacaatacgttatccattttaaagtatcg 31236296  T
Q  102 ggacttca 109  Q
    || |||||    
T  31236297 gggcttca 31236304  T

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Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 25933671 - 25933562
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||  |||||| ||||||||||  || |||| |||||| |||| |||||||||||| ||| ||||| |||||||||||| |    
T  25933671 aatcttcggatactctcctgatctgtatcgagaagtatcagatag-atattggtgcatgatacgcaggggatacgatacatcatccattttgaagtatat 25933573  T
Q  102 ggacttcagag 112  Q
    || ||||||||    
T  25933572 gggcttcagag 25933562  T

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Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 40497397 - 40497486
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||||  |||| |||| |||||||||| ||||||||||| |||||    
T  40497397 aatctttggatactctcctgatacgtatcgggaagtatcagacagg-tatcactgcaagatacgcaggggataaggtacgtcatccatttt 40497486  T

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Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 1776448 - 1776554
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||  ||| |||||| ||||||||||| ||| ||| |||||||| ||||||| | |||||||||||||     
T  1776448 aatcttcggatactcttctgatacgtatcggaaatgatcgggcagg-tatcggtgcagaatacgcaagggatacgatacgtcaaccattttgaagtatcg 1776546  T
Q  102 ggacttca 109  Q
    || |||||    
T  1776547 gggcttca 1776554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 14217174 - 14217263
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| |||||||||||| ||||||||  ||| |||||||||||| ||| |||||||||||  ||||||||| |||||||||||||    
T  14217174 gatactctccagatacgtatcggaaagtatcaaacag-atatcggtgcagaatacgcaggggatacaatacgtcatccattttgaagtatc 14217263  T

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Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21104588 - 21104492
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||   |||||||||||||||| |||||| ||| ||||||||||| |||| |||| ||||||| ||||||||| ||||| ||||||    
T  21104588 aatcttcggatactcctttgatacgtatcgggaaatatcagacag-atatcggtgcaagatacgcagaggatacgatacgtcatccattttaaagtat 21104492  T

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Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 7807393 - 7807492
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||| ||| ||||||||||||||||||||   |||| ||||||| || |||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  7807393 ggatactttccggatacgtatcgggaagtatcgaacagg-tatcggtacaagatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 7807491  T

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Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 20536835 - 20536775
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |||||    
T  20536835 tatcggtgcaggatatgcaggggatacgatacgtcatccattttgaagtatcggggcttca 20536775  T

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Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 3563946 - 3563906
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3563946 aatcttcggatactctcctgatacgtatcgggaagtatcag 3563906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 6124272 - 6124173
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| | || | |||||||||||||||  ||||||||||  ||||||||| ||||| ||||||| || ||||    
T  6124272 ggatactctccggatacgtatcaggaagtatcggacatg-tatcggtgcaggatacacaggggatacaatacgtcatccattttaaagtatcggggcttc 6124174  T

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Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 3545593 - 3545690
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||| ||||| |||||||||| || | ||||||||||| ||| | |   |||||| ||||||||| |||||||||||||    
T  3545593 aatcttcggatgctctcctgatacatatcgagaagtatcagacaag-tatcggtgcagaatacgtaaaagatacgatacgtcatccattttgaagtatc 3545690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 14824210 - 14824148
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||| |||| ||| | |||||| ||||||||||||||||||||||| ||||||||    
T  14824210 gatatcggtgcatgatacgcaagagatacgatacgtcatctattttgaagtatcgggacttca 14824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 35996749 - 35996652
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||| |||||||||||||||||||||  |||||||   |||| |||||||||| |||| |||||||||||  ||| ||||  |||||||||||||    
T  35996749 aatcttcgaatactctcctgatacgtatcgaaaagtatcgaacagg-tatcggtgcaagatacgcaggggatacaatacatcattcattttgaagtatc 35996652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 4561959 - 4561924
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  4561959 tcggatactctcctgatacgtatcgggaagtatcag 4561924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5588206 - 5588116
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| ||||| ||||| |||||||| || |||| |||||||||| ||||   || ||||||| ||||||||| |||||||||||||    
T  5588206 ggatactctcatgatatgtatcaggaagtatgagacagg-tatcggtgcaagatacaaagaggatacgatacgtcatccattttgaagtatc 5588116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 35342488 - 35342453
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  35342488 tcggatactctcctgatacgtatcgggaagtatcag 35342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 14217098 - 14217131
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  14217098 tcggatactctcctgatacgtatcgggaagtatc 14217131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 12206131 - 12206036
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    |||||||| ||||||||||||||||||| |  || ||||||||||| ||||| |||| ||||  |||  |||||| ||||||||| ||||| |||||    
T  12206131 aatcttcgaatactctcctgatacgtattgaaaaatatcaggcagg-tatcgatgcaagatacacagatgatacgatacgtcatccattttaaagta 12206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 3564010 - 3563975
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3564010 tcggatactcttctgatacgtatcgggaagtatcag 3563975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15880545 - 15880510
Alignment:
Q  1 aaatcttcggatactctcctgatacgtatcgggaag 36  Q
    |||||||||||||||||||||||||||||| |||||    
T  15880545 aaatcttcggatactctcctgatacgtatcaggaag 15880510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 31236137 - 31236167
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||||||    
T  31236137 gatactctcctgatacgtatcgggaagtatc 31236167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 45159354 - 45159416
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||| |||||| |||| ||| |||||||| ||||||||| ||||||||||||| || |||||    
T  45159354 gatattggtgcaagatacgcaagggatacgatacgtcatccattttgaagtatcggggcttca 45159416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 2319445 - 2319412
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||| |||||    
T  2319445 tcggatactctcctgatacgtatcgggacgtatc 2319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 3563906 - 3563849
Alignment:
Q  54 gtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcaga 111  Q
    |||||| ||||| |||||||||  ||||||||| ||||||||||||| || |||||||    
T  3563906 gtgcagaatatgtaggggatacaatacgtcatccattttgaagtatcggggcttcaga 3563849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 12819354 - 12819301
Alignment:
Q  56 gcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||  ||||||||||||||| ||||| ||||||||||||| || |||||    
T  12819354 gcaggatacacaggggatacggtacatcatccattttgaagtatcagggcttca 12819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 14824309 - 14824276
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||| ||||    
T  14824309 tcggatactctcctgatacgtatcgggaaatatc 14824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 34146350 - 34146317
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||| |||||||||    
T  34146350 tcggatactctcctgatacgtatcaggaagtatc 34146317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 52721363 - 52721259
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||    
T  52721363 ggatactctccgaatacgtatcgggaagtatcaggcag-atatcggtgcaggatacgcaggggatacgatacgtcatctattttgaagtat-tgggcttc 52721266  T
Q  109 agagctt 115  Q
    |||||||    
T  52721265 agagctt 52721259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 19738796 - 19738706
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  19738796 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 19738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 5834929 - 5834813
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |  ||||    
T  5834929 ggatactctcccgatacgtatcgggaagcatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggagcttc 5834831  T
Q  109 agagctttaaagtaacaa 126  Q
    | |||||| | |||||||    
T  5834830 acagctttcacgtaacaa 5834813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 52122888 - 52122987
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  52122888 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 52122986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 8064129 - 8064227
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  8064129 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 8064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 46431945 - 46432042
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||| |||||||||  ||||||||||||    
T  46431945 aatctttggatactctcttgatacgtatcgggaagtatcagtcagg-tatcgttgcaggatatgcagaggatacgatacgtcatccgttttgaagtatc 46432042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 5325740 - 5325839
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||  ||||||||| ||||| ||||||| || ||||    
T  5325740 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggggcttc 5325838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 42472588 - 42472687
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||| |||||||||| |||| | ||||||||||||||| |||||| |||| |||||||||| ||||||||||||| |||||||    
T  42472588 ggatactctccggatacgtattgggaagtatcgggcaag-tatcggtgcaggatacgcagggaatacagtacgtcatccattttgaagtatcgggacttc 42472686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 40694176 - 40694070
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||||| ||| ||| |||||||| ||| ||||| |||||||||||||     
T  40694176 aatcttcagatactctcctgatacgtatcgggaagtatcaatcagg-tatcggtgcagaatacgcatgggatacgatacatcatccattttgaagtatcg 40694078  T
Q  102 ggacttca 109  Q
    || |||||    
T  40694077 gggcttca 40694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 1177083 - 1176981
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    |||||||||||| ||||||| |||||| ||||||| |||||| ||| ||||||||||| | |||||||||| ||||||| ||||||||||||||| || |    
T  1177083 ttcggatactcttctgatacatatcggaaagtatcgggcagg-tatgggtgcaggatacgtaggggatacgatacgtcaactattttgaagtatcggggc 1176985  T
Q  106 ttca 109  Q
    ||||    
T  1176984 ttca 1176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 2586442 - 2586336
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| ||||||||||| || ||||||| |||||| | |||||| ||||||  ||||||||||||||||||||| ||||| |||||||     
T  2586442 aatcttcggatactcttctgatacgtattggaaagtatcgggcagg-tgtcggtgaaggatactcaggggatacggtacgtcatccattttaaagtatcg 2586344  T
Q  102 ggacttca 109  Q
    || |||||    
T  2586343 gggcttca 2586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 17892354 - 17892257
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||| |||||||| | |||| ||| | ||||||||||||| || |||||||||||||    
T  17892354 aatcttcggatactcttctgatacatatcgggaagtatcgggcagg-tatcggtgtatgatacgcatgagatacggtacgtcgtccattttgaagtatc 17892257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 55901151 - 55901248
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||| | ||||||||||||||| |||||||| || | | |||||||||||||||  ||||||||||| ||||||||||||||| |||||||    
T  55901151 aatcttcggatattttcctgatacgtatcgagaagtatcgggtatg-tatcggtgcaggatacacaggggatacgatacgtcatctattttaaagtatc 55901248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 41145711 - 41145612
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  ||||||||||| ||||||| | |||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  41145711 ggatactctccgaatacgtatcggaaagtatcggacagg-tatcgatgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 41145613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 21637771 - 21637665
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||| ||||  ||||| |||   ||||| || || |||||||| ||||||||||||||    
T  21637771 aatcttcggatactctcctgatacgtatcgggaagtataagagagg-tatcaatgcagaatacatagggggtatgggacgtcatccattttgaagtatct 21637673  T
Q  102 ggacttca 109  Q
    ||||||||    
T  21637672 ggacttca 21637665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 36511946 - 36512052
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||| | |||||| |||||||| ||| |||||||  ||||||| | |||||||||||||     
T  36511946 aatcttcggatactcttctgatacgtatcggaaagtatcgggcaag-tatcggcgcaggatacgcacgggatacaatacgtcaaccattttgaagtatcg 36512044  T
Q  102 ggacttca 109  Q
    || |||||    
T  36512045 gggcttca 36512052  T

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Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 47607215 - 47607110
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| ||| ||||||||||||||||| |||| ||||||||| |||||| |||||||||| ||||| |||||| || |||||| |||||||||||||     
T  47607215 aatcttcagatgctctcctgatacgtatcaggaaatatcaggca-gatatc-gtgcaggatacgcaggagatacgatatgtcatccattttgaagtatcg 47607118  T
Q  102 ggacttca 109  Q
    || |||||    
T  47607117 gggcttca 47607110  T

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Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 51858933 - 51858828
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgc-aggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||| ||||| |||||| ||||||||| ||||| ||||||| || |    
T  51858933 tcggatactctcctgatacgtatcgggaagtatcagacagg-tatc-gtgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcggggc 51858836  T
Q  106 ttcagagc 113  Q
    || |||||    
T  51858835 ttgagagc 51858828  T

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Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14795083 - 14795018
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||    
T  14795083 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 14795018  T

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Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 27982002 - 27981903
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||  |||||||| ||||||||||||  ||||||||| ||| ||||||||| |||||  ||||| |||||| ||||||||| ||||||||||||||    
T  27982002 aatcttcaaatactctcttgatacgtatcgaaaagtatcagacag-atatcggtggaggatgcgcaggagatacgatacgtcatccattttgaagtatct 27981904  T

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Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 38492305 - 38492380
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagag 112  Q
    ||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||||||    
T  38492305 gtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcagag 38492380  T

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Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 53322436 - 53322337
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||||||||||||  || || |||| |||||||||| |||  ||||||| ||||||||| ||||||||||||| || ||||    
T  53322436 ggatactctccggatacgtatcgggaagtatcgagccgg-tatcagtgcaggatacgcaaaggatacgatacgtcatccattttgaagtatcggggcttc 53322338  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21058939 - 21058843
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||| ||||||||||| ||||||||||||||| |||||| || | |||||||||||||||  ||| ||||||| ||||||||  ||||| ||||||    
T  21058939 aatctttggatactctccagatacgtatcgggaaatatcagacatg-tatcggtgcaggatacacagtggatacgctacgtcattcattttaaagtat 21058843  T

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Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 28377095 - 28376996
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| | |||||||||  ||||||| || ||| |||||||||||||||  |||| |||||| ||||||||| ||||||||||||| || ||||    
T  28377095 ggatactctcccggtacgtatcgaaaagtatcgggtagg-tatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatcggggcttc 28376997  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 44521994 - 44522084
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    |||||||||||||||||||||||||| || |||||  || ||||||||||||| ||||||||| ||||   ||| ||||| |||||||||||    
T  44521994 tcggatactctcctgatacgtatcggaaaatatcaaaca-gatatcggtgcagaatatgcaggagatataatacatcatccattttgaagta 44522084  T

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Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 3403631 - 3403683
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||| ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  3403631 gatatcagtgcaggatacacaggggatacggtacgtcatccattttgaagtat 3403683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 37992545 - 37992640
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    |||||| ||||||||| |||||||||||||| ||||||||| || | |||||||||| |||  ||| |||||||  |||||| || |||||||||||    
T  37992545 aatctttggatactcttctgatacgtatcggaaagtatcagacatg-tatcggtgcaagatccgcaagggatacaatacgtcttccattttgaagta 37992640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 51674918 - 51674867
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||| |||||| ||||||||| |||||| |||||||||||||||||||||||    
T  51674918 tatcagtgcagaatatgcaggagatacgatacgtcatctattttgaagtatc 51674867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 4400566 - 4400473
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctgga 104  Q
    ||||||||||||||||||||||||||||||||| || | ||||||| || ||||  |||| |||||| |   ||||  |||||||||||||||||    
T  4400566 gatactctcctgatacgtatcgggaagtatcagacaag-tatcggttcatgatacacaggagatacgatttatcattcattttgaagtatctgga 4400473  T

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Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 44121879 - 44121960
Alignment:
Q  27 tatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||  |||||| |||||| || |||||||||||| ||| |||||    
T  44121879 tatcaggaagtatcgggcagg-tatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaagtatgtgggcttca 44121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 31946174 - 31946207
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  31946174 tcggatactctcctgatacgtatcgggaagtatc 31946207  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 51858965 - 51858932
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  51858965 tcggatactctcctgatacgtatcgggaagtatc 51858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 24793679 - 24793714
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24793679 tcggatactctcctgatacgtattgggaagtatcag 24793714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 31946263 - 31946314
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| |||||| ||||| ||||||||| ||||| |||||||    
T  31946263 tatcggtgcaggatacgcagggaatacgatacgtcatccattttaaagtatc 31946314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 47607283 - 47607248
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||| ||||||||||||||||||||||||||    
T  47607283 tcggatactatcctgatacgtatcgggaagtatcag 47607248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 24793743 - 24793804
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatat 64  Q
    |||||||||||||||| |||||||||||||  |||||| || |||| ||||| ||||||||||    
T  24793743 aatcttcggatactcttctgatacgtatcgaaaagtattagacagg-tatcgatgcaggatat 24793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 1177147 - 1177114
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  1177147 tcggatactttcctgatacgtatcgggaagtatc 1177114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40694238 - 40694205
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||| |||||||||||||||||||||    
T  40694238 ggatactctcctcatacgtatcgggaagtatcag 40694205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Complemental strand, 49470448 - 49470419
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtat 39  Q
    ||||||||||||||||||||||||||||||    
T  49470448 gatactctcctgatacgtatcgggaagtat 49470419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 726504 - 726536
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||| ||||||||    
T  726504 tcggatactctcctgatacgtatcaggaagtat 726536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 754340 - 754308
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||| ||||||||    
T  754340 tcggatactctcctgatacgtatcaggaagtat 754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 17892416 - 17892384
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatca 41  Q
    ||||||||||||||||||||| |||||||||||    
T  17892416 ggatactctcctgatacgtattgggaagtatca 17892384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 36943836 - 36943804
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||| |||||||||||    
T  36943836 gatactctcctgatacgtatcaggaagtatcag 36943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 52572278 - 52572207
Alignment:
Q  40 caggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagag 112  Q
    |||||||| |||||||||| |||   |||||||||||| |||||||| ||||| ||||||| || ||||||||    
T  52572278 caggcagg-tatcggtgcatgatgcacaggggatacggaacgtcatccattttaaagtatcggggcttcagag 52572207  T

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Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 6134394 - 6134503
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||| |||||||||||| ||||||||| |||||||||||||     
T  6134394 aatcttcggatactctcctgatacatatcgggaagtatcaggtatg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatca 6134492  T
Q  102 ggacttcagag 112  Q
    || ||||||||    
T  6134493 gggcttcagag 6134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 35389849 - 35389750
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  35389849 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 35389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 29915959 - 29915861
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  29915959 gatactatcctgatacgtatcgggaagtatcagacagg-tatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttca 29915861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 29965112 - 29965014
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  29965112 gatactatcctgatacgtatcgggaagtatcagacagg-tatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttca 29965014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 7327811 - 7327706
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  7327811 ggatactatccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 7327713  T
Q  109 agagctt 115  Q
    | |||||    
T  7327712 acagctt 7327706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 22289733 - 22289830
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  22289733 aatcttcggatactctcctgatacgtatcaggaagtatcatgcagg-tattggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 22289830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 1679717 - 1679816
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||| || ||||    
T  1679717 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatatgcagtggatacggtacgttatccattttgaagtatcggggcttc 1679815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 40497429 - 40497330
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  40497429 ggatactctccggatacgtatcgggaagtatcgggcaag-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 40497331  T

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Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 48122924 - 48122822
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  ||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||    
T  48122924 ggatactctctggatacgtatcgggaaatatcgggcatg-tatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttc 48122826  T
Q  109 agag 112  Q
    ||||    
T  48122825 agag 48122822  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 55269028 - 55269130
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||||||||||||||     ||||| ||||||||| |||||||||||| ||||||||| |||||||||||||     
T  55269028 aatcttcggatactctcctgatacgtatcgggaagtatcagg-----tatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatcg 55269122  T
Q  102 ggacttca 109  Q
    || |||||    
T  55269123 gggcttca 55269130  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 13748459 - 13748565
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| |||| ||||||| ||||||| | |||||||||||||     
T  13748459 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcagaggatacgatacgtcaaccattttgaagtatcg 13748557  T
Q  102 ggacttca 109  Q
    || |||||    
T  13748558 gggcttca 13748565  T

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Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 28968616 - 28968519
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |  ||||| ||||||||||| |||||||||||||    
T  28968616 aatcttcggatactcttctgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgtaaaggatatggtacgtcatccattttgaagtatc 28968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 37996830 - 37996934
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||||||| |||| |||||| | ||||||||||||| |||||||||||||||||||||| ||||| ||||||| || ||||    
T  37996830 ggatactctccggatacgtatcgggaaatatcgggcagg-tctcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatcggggcttc 37996928  T
Q  109 agagct 114  Q
    | ||||    
T  37996929 acagct 37996934  T

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Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 42229776 - 42229684
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  42229776 ttcggatactcttctgatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatataatacgtcatctattttgaagtat 42229684  T

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Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 22310792 - 22310705
Alignment:
Q  21 gatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||||| || |||||    
T  22310792 gatacgtatcgggaagtatcaggcagg-tatcggtgcaggatacacaggggatacggtacgtcatccattgtgaagtatcggggcttca 22310705  T

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Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 42464926 - 42465025
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||||||||||||| |||| |||||| |||||||||| ||||||||||||| || ||||    
T  42464926 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcagaggatacagtacgtcatccattttgaagtatcggggcttc 42465024  T

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Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 28882697 - 28882787
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||| ||||||| ||||  ||||||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  28882697 ggatactctcccgatacgtatcggaaagtatcgggcat-atatcggtgcatgatacgcaggggatacggtacgtcatccattttgaagtatc 28882787  T

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Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 30226526 - 30226420
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||| ||||||||||| | ||||||| |||||| ||||||||||||||| |||| ||||||| || |||||| |||||||||||| |    
T  30226526 aatcttcggatactctcttgatacgtatcagaaagtatcgggcagg-tatcggtgcaggatacgcagaggatacgataagtcatccattttgaagtatat 30226428  T
Q  102 ggacttca 109  Q
    || |||||    
T  30226427 gggcttca 30226420  T

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Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 41742084 - 41742181
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||  ||| ||||||  ||||||||| |||||||||||||    
T  41742084 aatcttcggatactctccagatatgtatcgggaagtatcaggaagg-tatcggtgcaggatacacagaggatacaatacgtcatccattttgaagtatc 41742181  T

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Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 52684303 - 52684210
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| ||||||||||| ||||||| | |||| ||||||||||||||| ||| | |||||| |||||||||||||||||||||||    
T  52684303 ttcggatactctcctaatacgtatcggaaagtatcggacagg-tatcggtgcaggatacgcatgagatacgatacgtcatctattttgaagtatc 52684210  T

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Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 2122813 - 2122704
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgc---aggggatacggtacgtcatctattttgaagta 98  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| |||| ||   |||||||||  ||||||||| |||||||||||    
T  2122813 aatcttcggattctctcctgatacgtatcgggaagtatcaggcaag-tatcggtgcatgatacgcaggaggggatacaatacgtcatccattttgaagta 2122715  T
Q  99 tctggacttca 109  Q
    || || |||||    
T  2122714 tcggggcttca 2122704  T

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Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 30787574 - 30787680
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||| ||||| |||  || | |||| || ||||||| |||||||||||| ||||||||| |||||||||||||     
T  30787574 aatcttcggatactctcctgatacgtatcgagaagtgtcaaacaag-tatcagtacaggatacgcaggggatacgatacgtcatcgattttgaagtatcg 30787672  T
Q  102 ggacttca 109  Q
    || |||||    
T  30787673 gggcttca 30787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 38889092 - 38889197
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||| |||||||||||||||||||||| || ||||||||| ||||||||||||||||  | || ||||||| ||||||||| |||||||||||||     
T  38889092 aatcttcgaatactctcctgatacgtatcggaaattatcaggca-gatatcggtgcaggat-cgtagaggatacgatacgtcatccattttgaagtatca 38889189  T
Q  102 ggacttca 109  Q
    || |||||    
T  38889190 gggcttca 38889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 983300 - 983203
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| |||||||||||||||||||||||||||||||||| || |||||| |||||  |||  ||||||||||| ||||||||| |||||||| ||||    
T  983300 aatctttggatactctcctgatacgtatcgggaagtatcagaca-gatatcagtgcaaaatacacaggggatacgatacgtcatccattttgaattatc 983203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 3983803 - 3983715
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattt 91  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||  | | |||||| |||||||||| ||||    
T  3983803 aatcttcggatactctcctgatacgtatcgggaagtatcagacaag-tatcggtgcaggatacacggaggatacagtacgtcatccattt 3983715  T

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Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 25700866 - 25700794
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatac 75  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||| |||| ||||||    
T  25700866 aatcttcggatactctcctgatacgtattaggaagtatcaggcagg-tatcggtgcaggatacgcagaggatac 25700794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 52121279 - 52121175
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||| | |||| |||  |||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  52121279 ggatactctcccgatacgtatcgagaagtatcggacagg-tattagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 52121181  T
Q  109 agagct 114  Q
    | ||||    
T  52121180 acagct 52121175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 19421522 - 19421465
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcagg 60  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  19421522 aatcttcggatactctcctgatacgtatcgggaagtatcagacagg-tatcggtgcagg 19421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 28704825 - 28704727
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| ||||| ||| || ||||||| |  ||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||    
T  28704825 gatactctccggatacatattggaaagtatcggatagg-tatcagtgcaggatatgcaggggatacggtacgtcatccattttaaagtatcggggcttca 28704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 53192570 - 53192492
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    ||||| |||||| |||||||||||||||  ||||| ||||||||||||||| ||||||||||||| || |||||||||||    
T  53192570 gtatcgggcagg-tatcggtgcaggatactcagggtatacggtacgtcatccattttgaagtatcggggcttcagagctt 53192492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 7899731 - 7899828
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||| | | | |||||  | ||||||| |||||||||||||    
T  7899731 aatcttcggatactcttctgatacgtatcgggaaatatcaagca-gatataggtgcaggatacgtaagagatacatttcgtcatccattttgaagtatc 7899828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 19879151 - 19879201
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  19879151 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 19879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 22611420 - 22611492
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||| |||||| ||||||||||||| | |||||||||||||||||||||| ||||||||||||| || |||||    
T  22611420 gtatcgggcagg-tatcggtgcaggaaacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 22611492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 5271575 - 5271476
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||| |||||||||||||||||||||||||||||            ||||||| ||||||| ||| ||||||| ||| ||||||||||||||||||| |    
T  5271575 aatctccggatactctcctgatacgtatcgggaagg-----------tatcggttcaggatacgcaagggatacagtatgtcatctattttgaagtatat 5271487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 21157741 - 21157847
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||| |||||||| | ||||||| |||| | ||||  ||||||||   ||| | ||||| ||||||||| ||||||||||||||    
T  21157741 aatcttcggatactctcctggtacgtatcagaaagtatcgggca-gttatcaatgcaggatgcacagagaatacgatacgtcatccattttgaagtatct 21157839  T
Q  102 ggacttca 109  Q
    || |||||    
T  21157840 gggcttca 21157847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 47642077 - 47642026
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  47642077 tatcggtgcaggatacgcatgggatacggtacgtcatccattttgaagtatc 47642026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 25937084 - 25937173
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| |||||||||||| ||||||| |||| | ||| |||| |||||| ||||| |||||| ||||||||| ||||| |||||||    
T  25937084 gatactctccagatacgtatcggaaagtatcgggcatg-tattggtgtaggatacgcaggagatacgatacgtcatccattttaaagtatc 25937173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 45347403 - 45347308
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| | |||||||||||  ||||||| |||||| |||| |||||||||| |||||||||||| || |||| | |||||||||||||    
T  45347403 aatcttcggatactcttcggatacgtatcgaaaagtatcgggcagg-tatcagtgcaggata-gcaggggatacgata-gtcaaccattttgaagtatc 45347308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 10225209 - 10225274
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| || ||||| ||||    
T  10225209 tatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcagggcttcacagct 10225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 19420961 - 19420905
Alignment:
Q  53 ggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||| || |||||    
T  19420961 ggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttca 19420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 52505852 - 52505950
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | ||||||||||||||| |||| ||| || ||||||||||||||| ||| ||||||| |||| ||||| ||||| ||||||| || ||||    
T  52505852 ggatactcttcggatacgtatcgggaaatatcgggccgg-tatcggtgcaggatacgca-gggatacagtacatcatccatttttaagtatcggggcttc 52505949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 13353143 - 13353178
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  13353143 tcggatactctcctgatacgtatcgggaagtatcag 13353178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 47642176 - 47642141
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  47642176 tcggatactctcctgatacgtatcgggaagtatcag 47642141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 20510168 - 20510265
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||| |||| |||||||||| || ||||||||  |||| ||||||| || |||| ||| |||||||| | ||||||| |||||||||||||    
T  20510168 aatcttcagatattctcttgatacgtattggaaagtatcaaacagg-tatcggtacaagatacgcacgggatacgatgcgtcatccattttgaagtatc 20510265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 33240049 - 33239996
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||    
T  33240049 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcgatgcaggata 33239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 25700931 - 25700898
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  25700931 tcggatactctcctgatacgtatcgggaagtatc 25700898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 28548187 - 28548095
Alignment:
Q  4 tcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||| || ||  ||| ||  |||||||| ||||| |||||||||||||||||    
T  28548187 tcttcggatactctcctgatacgtatagagaagtatcatgca-gatatcagtacaaaatacgc--gggatacgatacgt-atctattttgaagtatc 28548095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 2567445 - 2567505
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||  ||||| ||||||||| ||||||||||||| ||| ||||    
T  2567445 tatcggtgcaggatacgcaggaaatacgatacgtcatccattttgaagtatcgggatttca 2567505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 45057253 - 45057304
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    |||||||| ||||||||||||||||||||| |||| | |||||||||||||||    
T  45057253 atactctcatgatacgtatcgggaagtatcgggcaag-tatcggtgcaggata 45057304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 39664126 - 39664091
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39664126 tcggatactttcctgatacgtatcgggaagtatcag 39664091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 41742020 - 41742051
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagta 38  Q
    ||||||||||||||||||||||||||||||||    
T  41742020 tcggatactctcctgatacgtatcgggaagta 41742051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 48333186 - 48333147
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatca 41  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  48333186 aatcttcggatactttcctgatacgtatcaggaagtatca 48333147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 1528574 - 1528497
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||| |||||| ||||| |||| |||| |||||||||| | ||||||||| ||||||||||||| |  ||||||||||    
T  1528574 gtatcgggcagg-tatcgatgcatgatacgcaggggatatgatacgtcatccattttgaagtatcggagcttcagagct 1528497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 38889034 - 38889068
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatca 41  Q
    |||||||||||||||||||| ||||||||||||||    
T  38889034 tcggatactctcctgatacgcatcgggaagtatca 38889068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 39664064 - 39663999
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcag 68  Q
    |||||||| ||||| | |||||||||||||| ||||||| | |||| ||||||||||||||| ||||    
T  39664064 aatcttcgaatactattctgatacgtatcggaaagtatcggacagg-tatcggtgcaggatacgcag 39663999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 47642112 - 47642074
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  47642112 aatcttcggatactcttctgatacgtattgggaagtatc 47642074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 49419295 - 49419245
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||| ||||||||| ||| |||||||| ||||||||| ||||||||||||    
T  49419295 tatcgatgcaggatacgcaagggatacgatacgtcatccattttgaagtat 49419245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 45532999 - 45533051
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggat 62  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||| ||||||||    
T  45532999 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcgatgcaggat 45533051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 47750948 - 47750997
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    ||||||||||||||| |||| |||||  |||||||||| |||||||||||    
T  47750948 tatcggtgcaggatacgcagaggatatagtacgtcatccattttgaagta 47750997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 28968675 - 28968647
Alignment:
Q  12 tactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||||    
T  28968675 tactctcctgatacgtatcgggaagtatc 28968647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 30787509 - 30787541
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  30787509 tcggatactctcctgatatgtatcgggaagtat 30787541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 48334129 - 48334089
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||| || ||||||||||| |||||||||||    
T  48334129 aatcttcggatactttcttgatacgtatcaggaagtatcag 48334089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 11829785 - 11829686
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  11829785 ggatactctccggatacgtattgggaagtatcaggcag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 11829687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 27354017 - 27353913
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||||| || ||||    
T  27354017 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcagggaatacggtacgtcatccattttgaagtatcggggcttc 27353919  T
Q  109 agagct 114  Q
    | ||||    
T  27353918 acagct 27353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 25969493 - 25969394
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  25969493 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 25969395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 34122636 - 34122727
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  34122636 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcagaggatacggtacgtcatccattttgaagtatct 34122727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 40095745 - 40095642
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  40095745 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 40095647  T
Q  110 gagct 114  Q
     ||||    
T  40095646 cagct 40095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 48163504 - 48163405
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||| || ||||    
T  48163504 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcacccattttgaagtatcggggcttc 48163406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 1043090 - 1043192
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  1043090 ggatactctcccgatacgtatcggaaagtatcaggcagg-tatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 1043188  T
Q  109 agag 112  Q
    ||||    
T  1043189 agag 1043192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 35159968 - 35159871
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||||||| || || | ||||||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  35159968 aatcttcggatactctcctgatacgtatcgggaagtattagacaag-tatcggtgcagaatatgcaggggatacgatacatcatccattttgaagtatc 35159871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 9250441 - 9250529
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  9250441 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 11058447 - 11058349
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||  ||||||||| | ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||    
T  11058447 gatactctcccaatacgtatctgaaagtatcagacag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtacctggacttca 11058349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 152 - 283
Target Start/End: Complemental strand, 3686634 - 3686500
Alignment:
Q  152 aggaggtggcccgaacaagtttaaatattaaggatcattcgacataagtgaaatccggacgtgccctattttgcgcttggatgaaggtcagatttctcca 251  Q
    |||||||||||  |||||||||||||| | | |||||| ||||||| ||||||||||||| |||||||||||||  |||||||||||||  |||||||||    
T  3686634 aggaggtggccaaaacaagtttaaatactcatgatcatccgacata-gtgaaatccggacatgccctattttgcatttggatgaaggtcgtatttctcca 3686536  T
Q  252 a----ggaagtggaatttgaatgaattggatgaagg 283  Q
    |     ||||||||||||||| ||||||||||||||    
T  3686535 aacagcgaagtggaatttgaaggaattggatgaagg 3686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21409494 - 21409398
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||| |||||| ||||||||| ||||| ||||||    
T  21409494 aatctttggatactctcctgatacgtatcgggatgtatcaggcagg-tatcagtgcaggatatacaggagatacgatacgtcatccatttttaagtat 21409398  T

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Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 23079057 - 23079149
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||| | ||||||| ||||||||||||||| |||||| |||||||||||||    
T  23079057 tcggatactctcctgatacgtatcgggaagtatcgggtagg-tatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatc 23079149  T

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Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 24956354 - 24956254
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| | ||||  |||| |||||| |||||||||| ||||||||| ||||||||||||||    
T  24956354 aatcttcggatactctcttgatacgtatcggaaagtatcaggcatg-tatcaatgcatgatatgtaggggatacgatacgtcatcaattttgaagtatct 24956256  T
Q  102 gg 103  Q
    ||    
T  24956255 gg 24956254  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 34238254 - 34238155
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  ||||||||||| ||||||| |||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  34238254 ggatactctccgaatacgtatcggaaagtatcgggcagg-tatcggtgcagaatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 34238156  T

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Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 23311825 - 23311736
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||  || |||||||||||| |||||||||||    
T  23311825 aatcttcggatactctcctgatacatatcgggaagtatcagaca-tatatcggtgcaggatacacatgggatacggtacatcatctatttt 23311736  T

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Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 44960147 - 44960244
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| ||||||||| ||||||| |||||||||||||||| |||| | || |||||||||| |||||||||||| ||||||||| |||||||||||||    
T  44960147 aatctttggatactcttctgatacatatcgggaagtatcagacagg-tgtcagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 44960244  T

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Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 26773731 - 26773830
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||| ||| |||||||| ||||||||| ||||| ||||||| || ||||    
T  26773731 ggatactctcccgatacgtatcgagaagtatcgggcag-atatcggtgcaggatacgcaagggatacgatacgtcatcaattttaaagtatcggggcttc 26773829  T

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Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 27555388 - 27555487
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| | |||| ||||||||||| ||| |||| | ||||||||||||||| ||||||||||||| || ||||    
T  27555388 ggatactctccggatacgtatcgggaagtatcggacagg-tatcggtgcagaatacgcagagaatacggtacgtcatccattttgaagtatcagggcttc 27555486  T

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Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 38263095 - 38262996
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||| ||||||||| |||| | ||||||||||||||| ||||||||||||| || ||||    
T  38263095 ggatactctccggatacgtatcggaaagtatcgggcagg-tatcgatgcaggatacgcagagaatacggtacgtcatccattttgaagtatcggggcttc 38262997  T

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Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 16564416 - 16564483
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagcttt 116  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  16564416 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttcagagcttt 16564483  T

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Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 16601246 - 16601179
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagcttt 116  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  16601246 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttcagagcttt 16601179  T

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Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 33454173 - 33454067
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||| ||||||||||||||| |||||||| | ||  ||||| |||||||||| |||||||||||| ||||||||| |||||||| ||||     
T  33454173 aatcttcggatactttcctgatacgtatcgagaagtatctgacat-atatcagtgcaggatacgcaggggatacgatacgtcatccattttgaaatatcg 33454075  T
Q  102 ggacttca 109  Q
    || |||||    
T  33454074 gggcttca 33454067  T

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Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 1363028 - 1363133
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    |||||||||||||||||||||||||| ||||||||| ||| | |||| ||||| ||||  |||||||||  || | ||||| ||||||||||||||||||    
T  1363028 ttcggatactctcctgatacgtatcgagaagtatcaagcatg-tatcagtgcaagatacacaggggataatgttcatcatccattttgaagtatctggac 1363126  T
Q  106 ttcagag 112  Q
    |||||||    
T  1363127 ttcagag 1363133  T

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Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 18113951 - 18114055
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||   || ||||| ||||||||||| |||||||| |||||    
T  18113951 aatcttcagatactctcctgatacatatcaggaagtatcaggca-gatatcggtgcaggatacatagaggatatggtacgtcatccattttgaa-tatct 18114048  T
Q  102 ggacttc 108  Q
    || ||||    
T  18114049 gggcttc 18114055  T

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Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 4291596 - 4291509
Alignment:
Q  21 gatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||| || |||||    
T  4291596 gatacgtatcgggaagtatcggacagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttaaagtatcggggcttca 4291509  T

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Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 26845915 - 26846005
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||  ||||||||||||||||||  |||||| ||||||||||||||| ||| | |||||||||| ||||| |||||||||||||    
T  26845915 ggatactctccaaatacgtatcgggaagtattgggcagg-tatcggtgcaggatacgcatgagatacggtacatcatccattttgaagtatc 26846005  T

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Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 39520857 - 39520797
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  39520857 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 39520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 42897059 - 42896999
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  42897059 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 42896999  T

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Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 38064698 - 38064592
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||| |||| ||||| |||| ||| | |||||| || |||||| ||||| |||||||     
T  38064698 aatcttcggatactctcctgatacgtatcggaaagtatcggtcagg-tatcagtgcatgatacgcatgagatacgttatgtcatccattttaaagtatcg 38064600  T
Q  102 ggacttca 109  Q
    || |||||    
T  38064599 gggcttca 38064592  T

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Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 27398066 - 27398171
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||| ||| || |||||||  ||||| |||| |||||||||| ||||||||||| |||||||||| ||||| ||||||| || ||||    
T  27398066 ggatactctccggatacatattggaaagtatcgagcagg-tatcagtgcaggatacgcaggggatacagtacgtcatccattttaaagtatccgggcttc 27398164  T
Q  109 agagctt 115  Q
    | |||||    
T  27398165 atagctt 27398171  T

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Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 36202837 - 36202887
Alignment:
Q  50 atcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  36202837 atcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 36202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 40041482 - 40041385
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||  |||||||||| || | |||| || ||||||| | ||| |||||| ||| |||||||||||||| ||||    
T  40041482 aatcttcggatactctcctgatacgtatcaagaagtatcagacatg-tatcagtacaggatacgtaggagatacgatacatcatctattttgaaatatc 40041385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 44269828 - 44269732
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||| |||||||||||||  ||||||||| ||| |||| | ||||||||||||| ||||||| |||||||||| || ||||||||||    
T  44269828 aatcttcagatactctactgatacgtatcgaaaagtatcagacag-atatag-tgcaggatatgcacgggataccgtacgtcatccatcttgaagtatc 44269732  T

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Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 16850882 - 16850783
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||| ||||||| |||| | |||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| || ||||    
T  16850882 ggatactcttcagatacgtatcggaaagtatcgggcaag-tatcggtgcatgatacacagggaatacggtacgtcatccattttgaaatatcggggcttc 16850784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23970138 - 23970247
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||| || ||||||||| ||||||||||| || ||||||| |||| |||| ||||||||||   ||||||||| ||| |||| |||      
T  23970138 aatcttcagatactcttctaatacgtatcaggaagtatcagaca-gatatcgatgcatgatacgcaggggatataatacgtcatccattatgaaatattg 23970236  T
Q  102 ggacttcagag 112  Q
    |||||||||||    
T  23970237 ggacttcagag 23970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 8056346 - 8056438
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||| ||||||||||||||||||||||| ||||| ||     || |||||| || |||| |||  ||||||||||||||||| ||||||||||||    
T  8056346 aatcttcagatactctcctgatacgtatcggaaagtacca-----gacatcggtacaagatacgcaaaggatacggtacgtcatccattttgaagtat 8056438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 1400216 - 1400251
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  1400216 tcggatactctcctgatacgtatcgggaagtatcag 1400251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 19510619 - 19510529
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||| || ||||| |||| ||||||||| |||| | |||| ||||| ||||  ||||||||||| ||||||||| |||||||||||||    
T  19510619 ggatactcacccgatacatatcaggaagtatcgggcatg-tatcagtgcatgatacacaggggatacgatacgtcatccattttgaagtatc 19510529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 554926 - 554998
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||| ||| |||||||||||||||  ||||||||||| |||||||||||||||  |||||| || |||||    
T  554926 gtatcaggaagg-tatcggtgcaggatacacaggggatacgatacgtcatctattttagagtatcggggcttca 554998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 36757964 - 36757996
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||||||||||||    
T  36757964 tcggatactctcctgatacgtatcgggaagtat 36757996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 36767488 - 36767520
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||||||||||||    
T  36767488 tcggatactctcctgatacgtatcgggaagtat 36767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 8028793 - 8028740
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    ||||||||||| |||||||||| ||||||||| ||| || |||||||||||||||    
T  8028793 ggatactctcccgatacgtatcaggaagtatcgggccgg-tatcggtgcaggata 8028740  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 19820876 - 19820914
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  19820876 aatcttcggatactctcctgatacatatcggaaagtatc 19820914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 21180000 - 21179970
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||||||    
T  21180000 gatactctcctgatacgtatcgggaagtatc 21179970  T

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Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 554838 - 554871
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  554838 tcggatactctcctgatacttatcgggaagtatc 554871  T

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Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 15878372 - 15878405
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||| |||||||    
T  15878372 tcggatactctcctgatacgtatcggaaagtatc 15878405  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 23970074 - 23970107
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||| |||||||    
T  23970074 tcggatactctcctgatacgtatcggaaagtatc 23970107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 40041545 - 40041512
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||| ||||    
T  40041545 tcggatactctcctgatacgtatcgggaaatatc 40041512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 2908256 - 2908343
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaa 95  Q
    |||| |||||||| |||||||||||||  |||||||||| ||||||| |||| |||||| |   ||||| ||| |||||| ||||||||    
T  2908256 tcgggtactctccagatacgtatcggggtgtatcaggca-gatatcgctgcatgatatgtatctgatacagtatgtcatcaattttgaa 2908343  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 7416717 - 7416689
Alignment:
Q  2 aatcttcggatactctcctgatacgtatc 30  Q
    |||||||||||||||||||||||||||||    
T  7416717 aatcttcggatactctcctgatacgtatc 7416689  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 26973156 - 26973116
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||||| |||||||||||||  |||||||||    
T  26973156 aatcttcggatactcttctgatacgtatcgaaaagtatcag 26973116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 38064768 - 38064729
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  38064768 aatcttcggatactctcttgatacgtatc-ggaagtatcag 38064729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 47238665 - 47238725
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||  ||| |||||||||||| ||| ||||| ||||||||||||| || |||||    
T  47238665 tatcggtgcaatatacgcaggggatacgatacatcatccattttgaagtatcggggcttca 47238725  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 47720188 - 47720220
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagta 38  Q
    |||||||||||||| ||||||||||||||||||    
T  47720188 ttcggatactctccggatacgtatcgggaagta 47720220  T

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Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 234412 - 234300
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| ||||| |||||| ||||||| | |||||||||||||     
T  234412 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggagatacgatacgtcaaccattttgaagtatcg 234314  T
Q  102 ggacttcagagctt 115  Q
    || |||||||||||    
T  234313 gggcttcagagctt 234300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 8357057 - 8356958
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  8357057 ggatactcttcggatacgtatcgggaagtatcggacagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcaggacttc 8356959  T

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Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 1036846 - 1036944
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  1036846 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 1036944  T

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Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 31195888 - 31195977
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  31195888 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 7188798 - 7188900
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||   |||| ||||||||||||| || ||||    
T  7188798 ggatactctccggatacgtatcaggaagtatcaggcagg-tatcggtgcaggatacgcaggggatacggta---catccattttgaagtatcggggcttc 7188893  T
Q  109 agagctt 115  Q
    |||||||    
T  7188894 agagctt 7188900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 3299238 - 3299141
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||| |||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||    
T  3299238 atactctccagatacgtatcggaaaatatcatgcagg-tatcggtgcaggatatgcagaggatacggtacatcatctattttgaagtatcagggcttca 3299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 13607797 - 13607894
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||| | || ||| ||||||| |||| ||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  13607797 aatcttcggatactctcctgatacgtatcagaaattattaggcagg-tatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 26327260 - 26327155
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||  |||| |||||| ||||||||| |||||||||||||     
T  26327260 aatcttcggatactctctt-atacgtatcgggaagtatcgggcagg-tatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatcg 26327163  T
Q  102 ggacttca 109  Q
    || |||||    
T  26327162 gggcttca 26327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 27084091 - 27083985
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||| |||||||||||| |||||||| |||||||||   ||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||     
T  27084091 aatctttggatactctccttatacgtattgggaagtattgagcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcg 27083993  T
Q  102 ggacttca 109  Q
    || |||||    
T  27083992 gggcttca 27083985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 3212576 - 3212477
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||  || || ||||| ||||||||| ||||||||||||| || ||||    
T  3212576 ggatactctccggatacgtatcgggaagtatcgggcag-atatcggtgcaggatacacaaggaatacgatacgtcatccattttgaagtatcggggcttc 3212478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 32018074 - 32017986
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| | ||||||||| || ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  32018074 atactctacggatacgtataggaaagtatcgggcag-atatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32130678 - 32130777
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||||||||||||||||||| ||||   |||| |||| |||||||||| |||||||||||||||||||||  ||||| ||||||| || ||||    
T  32130678 ggatactctcctgatacgtatcgggaaatatcgaacagg-tatcagtgcaggatacgcaggggatacggtacgtcattcattttaaagtatcggggcttc 32130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19128259 - 19128163
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||| |||||||||||||| ||||||| ||| || ||| |||||||||||  ||||||||||| ||||||| | ||||| ||||||    
T  19128259 aatcttcggatactcttctgatacgtatcggaaagtatcgggc-gggtattggtgcaggatacacaggggatacgatacgtcaaccattttaaagtat 19128163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 6708053 - 6708159
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||| |||||||||| ||||  ||||||||||  || |||||| ||||| |||||||     
T  6708053 aatcttcggatactctcctgatacatattggaaagtatcaggaagg-tatcggtgcatgatacacaggggatacaatatgtcatccattttaaagtatcg 6708151  T
Q  102 ggacttca 109  Q
    || |||||    
T  6708152 gggcttca 6708159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 25834515 - 25834605
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| ||||||||||||||| ||| ||||||||| | |||| |||||||||| ||| |||||||| ||||||||| | |||||||||||    
T  25834515 ggatactgtcctgatacgtatcgagaaatatcaggcatg-tatcagtgcaggatacgcacgggatacgatacgtcatccaatttgaagtatc 25834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 13061325 - 13061414
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||| ||||||||| |||| | ||| ||||||||||  |||||||||||||    
T  13061325 gatactctcctaatacgtatcagaaagtatcaggcag-atatcgatgcaggatacgcagagaatatggtacgtcattcattttgaagtatc 13061414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 10894619 - 10894690
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||| |||||||||| |||| || ||||||||||||||||||| ||||||||||||| || |||||    
T  10894619 gtatcaggcagg-tatcggtgcatgatacgc-ggggatacggtacgtcatccattttgaagtatcagggcttca 10894690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 31079777 - 31079737
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  31079777 aatcatcggatactctcctgatacgtatcgggaagtatcag 31079737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 7255091 - 7255056
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  7255091 tcggatactctcctgatacgtatcgggaagtatcag 7255056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 29893028 - 29892966
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||| ||||||||| ||||||||||| |||| ||||| ||||| |||||||||| |||||    
T  29893028 gatatcgatgcaggatacgcaggggatacagtacatcatccattttaaagtatctgggcttca 29892966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 31079672 - 31079621
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||| |||||||    
T  31079672 tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatc 31079621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 10894533 - 10894563
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgg 32  Q
    |||||||||||||||||||||||||||||||    
T  10894533 aatcttcggatactctcctgatacgtatcgg 10894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 31741232 - 31741278
Alignment:
Q  67 aggggatacggtacgtcatctattttgaagtatctggacttcagagc 113  Q
    |||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  31741232 aggggatacgatacgtcatccattttgaagtatcggaacttcagagc 31741278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 19128323 - 19128290
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  19128323 tcggatactttcctgatacgtatcgggaagtatc 19128290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 8111 - 8210
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  8111 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttc 8209  T

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Target: scaffold0250 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5611 - 5521
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  5611 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcgtccattttgaagtatc 5521  T

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Target: scaffold0285 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 13356 - 13259
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| ||||||||| ||||||||||||||||||||| | |||| ||||||||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  13356 aatcttcagatactctcttgatacgtatcgggaagtatctgacagg-tatcggtgcaggatacgcaggagatacgatacgtcatccattttgaagtatc 13259  T

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Target: scaffold0240 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 10706 - 10600
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||||||||||||||||| |||||||| |||| | |||||||||| |||| |||||||||| ||||| ||||| ||||| ||||||||    
T  10706 aatcttctgatactctcctgatacgtatcgagaagtatcgggcaag-tatcggtgcatgatacgcaggggatatggtacatcatccattttaaagtatct 10608  T
Q  102 ggacttca 109  Q
    || |||||    
T  10607 gggcttca 10600  T

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Target: scaffold0037 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 27839 - 27905
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| |||||    
T  27839 tatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 27905  T

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Target: scaffold0060 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 30463 - 30562
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| |||||||| |||||| |||||  ||||||||||| ||| ||||||||||||| || ||||    
T  30463 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgtaggatacgcaggaaatacggtacgttatccattttgaagtatcggggcttc 30561  T

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Target: scaffold0005 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 44648 - 44713
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||    
T  44648 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 44713  T

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Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 42123 - 42183
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || |||||    
T  42123 tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttca 42183  T

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Target: scaffold0177 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 25588 - 25655
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagcttt 116  Q
    ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| || ||||| ||||||    
T  25588 tatcggtgcagaatacgcaggggatacggtgcgtcatccattttgaagtatcggggcttcacagcttt 25655  T

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Target: scaffold0406 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 13921 - 13866
Alignment:
Q  54 gtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| ||||  ||||| |||||||||| ||||||||||||| ||||||||    
T  13921 gtgcaggatacgcagatgatacagtacgtcatccattttgaagtatcgggacttca 13866  T

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