View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13997_low_11 (Length: 346)

Name: NF13997_low_11
Description: NF13997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13997_low_11
NF13997_low_11
[»] chr5 (43 HSPs)
chr5 (2-100)||(30284619-30284716)
chr5 (9-113)||(33829749-33829852)
chr5 (2-100)||(26691625-26691722)
chr5 (2-100)||(26716282-26716379)
chr5 (2-100)||(26961357-26961454)
chr5 (2-100)||(26986022-26986119)
chr5 (9-109)||(32707850-32707949)
chr5 (9-109)||(41392731-41392830)
chr5 (9-109)||(39690782-39690881)
chr5 (2-100)||(17138266-17138362)
chr5 (9-114)||(30777541-30777645)
chr5 (9-109)||(1639801-1639900)
chr5 (2-109)||(1795392-1795498)
chr5 (9-109)||(10656820-10656919)
chr5 (10-109)||(30918378-30918476)
chr5 (6-100)||(11906227-11906320)
chr5 (2-100)||(34032378-34032475)
chr5 (2-99)||(3934800-3934896)
chr5 (6-115)||(21251459-21251567)
chr5 (2-99)||(42366115-42366211)
chr5 (9-109)||(9792319-9792418)
chr5 (9-109)||(22774554-22774653)
chr5 (9-100)||(32728728-32728818)
chr5 (10-100)||(35746271-35746360)
chr5 (10-100)||(41233388-41233477)
chr5 (49-109)||(12852119-12852179)
chr5 (9-109)||(32624877-32624976)
chr5 (2-92)||(5722004-5722093)
chr5 (2-74)||(3701233-3701304)
chr5 (2-81)||(1920864-1920942)
chr5 (2-109)||(5612454-5612560)
chr5 (6-100)||(14836390-14836483)
chr5 (10-99)||(15066148-15066236)
chr5 (49-114)||(26795051-26795116)
chr5 (2-42)||(7629125-7629165)
chr5 (7-42)||(17138202-17138237)
chr5 (7-40)||(26716410-26716443)
chr5 (7-40)||(26986150-26986183)
chr5 (2-63)||(43357771-43357831)
chr5 (49-100)||(6243216-6243267)
chr5 (7-42)||(25749741-25749776)
chr5 (7-40)||(27938296-27938329)
chr5 (7-39)||(42366055-42366087)
[»] chr8 (40 HSPs)
chr8 (9-115)||(13422202-13422307)
chr8 (2-109)||(27886190-27886296)
chr8 (2-109)||(27944848-27944954)
chr8 (9-109)||(2872929-2873028)
chr8 (9-109)||(4245940-4246039)
chr8 (2-111)||(27968101-27968211)
chr8 (2-111)||(28025087-28025197)
chr8 (9-100)||(32759382-32759472)
chr8 (2-100)||(32424930-32425027)
chr8 (2-100)||(37372268-37372365)
chr8 (9-109)||(22201356-22201455)
chr8 (9-109)||(32877437-32877536)
chr8 (9-116)||(12580572-12580678)
chr8 (10-109)||(34901402-34901500)
chr8 (9-109)||(6028487-6028586)
chr8 (9-109)||(16384617-16384716)
chr8 (9-109)||(36483435-36483534)
chr8 (9-109)||(28876585-28876684)
chr8 (9-100)||(43771723-43771813)
chr8 (2-100)||(5818323-5818420)
chr8 (9-99)||(25022135-25022224)
chr8 (9-100)||(19948015-19948105)
chr8 (2-109)||(29355623-29355729)
chr8 (2-109)||(23265649-23265755)
chr8 (26-100)||(19436283-19436356)
chr8 (26-100)||(19572432-19572505)
chr8 (36-100)||(32638902-32638965)
chr8 (2-100)||(20182383-20182479)
chr8 (26-100)||(37668591-37668664)
chr8 (2-100)||(38388676-38388773)
chr8 (9-109)||(45217239-45217338)
chr8 (47-115)||(12357883-12357950)
chr8 (47-115)||(12359011-12359078)
chr8 (7-42)||(3892099-3892134)
chr8 (6-101)||(30804761-30804855)
chr8 (52-99)||(40412445-40412492)
chr8 (7-40)||(32425058-32425091)
chr8 (7-40)||(37372397-37372430)
chr8 (2-42)||(10349310-10349350)
chr8 (2-46)||(24100205-24100249)
[»] chr1 (45 HSPs)
chr1 (7-100)||(2472871-2472963)
chr1 (9-113)||(20409573-20409676)
chr1 (2-99)||(29167957-29168053)
chr1 (9-109)||(1043227-1043326)
chr1 (10-114)||(6916894-6916997)
chr1 (9-109)||(28949260-28949359)
chr1 (9-109)||(37346867-37346966)
chr1 (9-109)||(43189655-43189754)
chr1 (2-109)||(9781642-9781748)
chr1 (10-109)||(38330427-38330525)
chr1 (10-109)||(52895733-52895831)
chr1 (9-99)||(1036469-1036558)
chr1 (9-109)||(37104120-37104219)
chr1 (9-100)||(8132192-8132282)
chr1 (2-109)||(14167084-14167190)
chr1 (2-100)||(34432395-34432492)
chr1 (2-112)||(40775992-40776101)
chr1 (2-103)||(2364683-2364783)
chr1 (2-100)||(32381071-32381168)
chr1 (9-100)||(5984236-5984326)
chr1 (2-100)||(10822411-10822509)
chr1 (21-100)||(38948741-38948819)
chr1 (6-100)||(3708295-3708388)
chr1 (9-99)||(13013011-13013100)
chr1 (2-100)||(48715237-48715334)
chr1 (11-100)||(25256625-25256713)
chr1 (36-109)||(36367738-36367810)
chr1 (9-109)||(3426848-3426947)
chr1 (9-101)||(28659319-28659410)
chr1 (9-109)||(31653421-31653520)
chr1 (9-100)||(30323724-30323814)
chr1 (2-112)||(2222991-2223100)
chr1 (1-109)||(29861801-29861908)
chr1 (2-95)||(9528851-9528943)
chr1 (2-100)||(10763670-10763765)
chr1 (65-100)||(24849373-24849408)
chr1 (2-109)||(34096564-34096670)
chr1 (2-92)||(41676001-41676090)
chr1 (7-42)||(9528791-9528826)
chr1 (7-40)||(9781779-9781812)
chr1 (7-40)||(24851611-24851644)
chr1 (7-40)||(33039749-33039782)
chr1 (2-30)||(9092505-9092533)
chr1 (60-100)||(38218407-38218447)
chr1 (7-39)||(41675937-41675969)
[»] chr2 (49 HSPs)
chr2 (9-100)||(4170521-4170611)
chr2 (2-109)||(35342317-35342423)
chr2 (2-115)||(37134310-37134422)
chr2 (9-109)||(6497668-6497767)
chr2 (9-109)||(7876714-7876813)
chr2 (9-109)||(38602341-38602440)
chr2 (9-109)||(40308916-40309015)
chr2 (9-109)||(22570937-22571036)
chr2 (9-109)||(33324818-33324917)
chr2 (9-109)||(16561800-16561899)
chr2 (2-115)||(43214566-43214680)
chr2 (2-109)||(28746664-28746770)
chr2 (2-100)||(2319284-2319381)
chr2 (2-100)||(4355334-4355431)
chr2 (2-100)||(34146189-34146286)
chr2 (2-100)||(44156606-44156703)
chr2 (2-107)||(8482929-8483033)
chr2 (2-100)||(1005522-1005618)
chr2 (2-99)||(4561798-4561894)
chr2 (2-111)||(24585528-24585635)
chr2 (9-109)||(18300972-18301071)
chr2 (9-109)||(22484267-22484366)
chr2 (2-109)||(31236198-31236304)
chr2 (2-112)||(25933562-25933671)
chr2 (2-92)||(40497397-40497486)
chr2 (2-109)||(1776448-1776554)
chr2 (10-100)||(14217174-14217263)
chr2 (2-99)||(21104492-21104588)
chr2 (9-109)||(7807393-7807492)
chr2 (49-109)||(20536775-20536835)
chr2 (2-42)||(3563906-3563946)
chr2 (9-109)||(6124173-6124272)
chr2 (2-100)||(3545593-3545690)
chr2 (47-109)||(14824148-14824210)
chr2 (2-100)||(35996652-35996749)
chr2 (7-42)||(4561924-4561959)
chr2 (9-100)||(5588116-5588206)
chr2 (7-42)||(35342453-35342488)
chr2 (7-40)||(14217098-14217131)
chr2 (2-98)||(12206036-12206131)
chr2 (7-42)||(3563975-3564010)
chr2 (1-36)||(15880510-15880545)
chr2 (10-40)||(31236137-31236167)
chr2 (47-109)||(45159354-45159416)
chr2 (7-40)||(2319412-2319445)
chr2 (54-111)||(3563849-3563906)
chr2 (56-109)||(12819301-12819354)
chr2 (7-40)||(14824276-14824309)
chr2 (7-40)||(34146317-34146350)
[»] chr4 (44 HSPs)
chr4 (9-115)||(52721259-52721363)
chr4 (9-100)||(19738706-19738796)
chr4 (9-126)||(5834813-5834929)
chr4 (9-109)||(52122888-52122987)
chr4 (10-109)||(8064129-8064227)
chr4 (2-100)||(46431945-46432042)
chr4 (9-109)||(5325740-5325839)
chr4 (9-109)||(42472588-42472687)
chr4 (2-109)||(40694070-40694176)
chr4 (6-109)||(1176981-1177083)
chr4 (2-109)||(2586336-2586442)
chr4 (2-100)||(17892257-17892354)
chr4 (2-100)||(55901151-55901248)
chr4 (9-109)||(41145612-41145711)
chr4 (2-109)||(21637665-21637771)
chr4 (2-109)||(36511946-36512052)
chr4 (2-109)||(47607110-47607215)
chr4 (7-113)||(51858828-51858933)
chr4 (49-114)||(14795018-14795083)
chr4 (2-102)||(27981903-27982002)
chr4 (36-112)||(38492305-38492380)
chr4 (9-109)||(53322337-53322436)
chr4 (2-99)||(21058843-21058939)
chr4 (9-109)||(28376996-28377095)
chr4 (7-98)||(44521994-44522084)
chr4 (47-99)||(3403631-3403683)
chr4 (2-98)||(37992545-37992640)
chr4 (49-100)||(51674867-51674918)
chr4 (10-104)||(4400473-4400566)
chr4 (27-109)||(44121879-44121960)
chr4 (7-40)||(31946174-31946207)
chr4 (7-40)||(51858932-51858965)
chr4 (7-42)||(24793679-24793714)
chr4 (49-100)||(31946263-31946314)
chr4 (7-42)||(47607248-47607283)
chr4 (2-64)||(24793743-24793804)
chr4 (7-40)||(1177114-1177147)
chr4 (9-42)||(40694205-40694238)
chr4 (10-39)||(49470419-49470448)
chr4 (7-39)||(726504-726536)
chr4 (7-39)||(754308-754340)
chr4 (9-41)||(17892384-17892416)
chr4 (10-42)||(36943804-36943836)
chr4 (40-112)||(52572207-52572278)
[»] chr3 (62 HSPs)
chr3 (2-112)||(6134394-6134503)
chr3 (9-109)||(35389750-35389849)
chr3 (10-109)||(29915861-29915959)
chr3 (10-109)||(29965014-29965112)
chr3 (9-115)||(7327706-7327811)
chr3 (2-100)||(22289733-22289830)
chr3 (9-109)||(1679717-1679816)
chr3 (9-109)||(40497330-40497429)
chr3 (9-112)||(48122822-48122924)
chr3 (2-109)||(55269028-55269130)
chr3 (2-109)||(13748459-13748565)
chr3 (2-100)||(28968519-28968616)
chr3 (9-114)||(37996830-37996934)
chr3 (6-99)||(42229684-42229776)
chr3 (21-109)||(22310705-22310792)
chr3 (9-109)||(42464926-42465025)
chr3 (9-100)||(28882697-28882787)
chr3 (2-109)||(30226420-30226526)
chr3 (2-100)||(41742084-41742181)
chr3 (6-100)||(52684210-52684303)
chr3 (2-109)||(2122704-2122813)
chr3 (2-109)||(30787574-30787680)
chr3 (2-109)||(38889092-38889197)
chr3 (2-100)||(983203-983300)
chr3 (2-91)||(3983715-3983803)
chr3 (2-75)||(25700794-25700866)
chr3 (9-114)||(52121175-52121279)
chr3 (2-60)||(19421465-19421522)
chr3 (10-109)||(28704727-28704825)
chr3 (36-115)||(53192492-53192570)
chr3 (2-100)||(7899731-7899828)
chr3 (49-99)||(19879151-19879201)
chr3 (36-109)||(22611420-22611492)
chr3 (2-112)||(5271476-5271575)
chr3 (2-109)||(21157741-21157847)
chr3 (49-100)||(47642026-47642077)
chr3 (10-100)||(25937084-25937173)
chr3 (2-100)||(45347308-45347403)
chr3 (49-114)||(10225209-10225274)
chr3 (53-109)||(19420905-19420961)
chr3 (9-109)||(52505852-52505950)
chr3 (7-42)||(13353143-13353178)
chr3 (7-42)||(47642141-47642176)
chr3 (2-100)||(20510168-20510265)
chr3 (9-63)||(33239996-33240049)
chr3 (7-40)||(25700898-25700931)
chr3 (4-100)||(28548095-28548187)
chr3 (49-109)||(2567445-2567505)
chr3 (11-63)||(45057253-45057304)
chr3 (7-42)||(39664091-39664126)
chr3 (7-38)||(41742020-41742051)
chr3 (2-41)||(48333147-48333186)
chr3 (36-114)||(1528497-1528574)
chr3 (7-41)||(38889034-38889068)
chr3 (2-68)||(39663999-39664064)
chr3 (2-40)||(47642074-47642112)
chr3 (49-99)||(49419245-49419295)
chr3 (9-62)||(45532999-45533051)
chr3 (49-98)||(47750948-47750997)
chr3 (12-40)||(28968647-28968675)
chr3 (7-39)||(30787509-30787541)
chr3 (2-42)||(48334089-48334129)
[»] chr7 (55 HSPs)
chr7 (9-109)||(11829686-11829785)
chr7 (9-114)||(27353913-27354017)
chr7 (9-109)||(25969394-25969493)
chr7 (9-101)||(34122636-34122727)
chr7 (10-114)||(40095642-40095745)
chr7 (9-109)||(48163405-48163504)
chr7 (9-112)||(1043090-1043192)
chr7 (2-100)||(35159871-35159968)
chr7 (9-98)||(9250441-9250529)
chr7 (10-109)||(11058349-11058447)
chr7 (152-283)||(3686500-3686634)
chr7 (2-99)||(21409398-21409494)
chr7 (7-100)||(23079057-23079149)
chr7 (2-103)||(24956254-24956354)
chr7 (9-109)||(34238155-34238254)
chr7 (2-92)||(23311736-23311825)
chr7 (2-100)||(44960147-44960244)
chr7 (9-109)||(26773731-26773830)
chr7 (9-109)||(27555388-27555487)
chr7 (9-109)||(38262996-38263095)
chr7 (49-116)||(16564416-16564483)
chr7 (49-116)||(16601179-16601246)
chr7 (2-109)||(33454067-33454173)
chr7 (6-112)||(1363028-1363133)
chr7 (2-108)||(18113951-18114055)
chr7 (21-109)||(4291509-4291596)
chr7 (9-100)||(26845915-26846005)
chr7 (49-109)||(39520797-39520857)
chr7 (49-109)||(42896999-42897059)
chr7 (2-109)||(38064592-38064698)
chr7 (9-115)||(27398066-27398171)
chr7 (50-100)||(36202837-36202887)
chr7 (2-100)||(40041385-40041482)
chr7 (2-100)||(44269732-44269828)
chr7 (9-109)||(16850783-16850882)
chr7 (2-112)||(23970138-23970247)
chr7 (2-99)||(8056346-8056438)
chr7 (7-42)||(1400216-1400251)
chr7 (9-100)||(19510529-19510619)
chr7 (36-109)||(554926-554998)
chr7 (7-39)||(36757964-36757996)
chr7 (7-39)||(36767488-36767520)
chr7 (9-63)||(8028740-8028793)
chr7 (2-40)||(19820876-19820914)
chr7 (10-40)||(21179970-21180000)
chr7 (7-40)||(554838-554871)
chr7 (7-40)||(15878372-15878405)
chr7 (7-40)||(23970074-23970107)
chr7 (7-40)||(40041512-40041545)
chr7 (7-95)||(2908256-2908343)
chr7 (2-30)||(7416689-7416717)
chr7 (2-42)||(26973116-26973156)
chr7 (2-42)||(38064729-38064768)
chr7 (49-109)||(47238665-47238725)
chr7 (6-38)||(47720188-47720220)
[»] chr6 (24 HSPs)
chr6 (2-115)||(234300-234412)
chr6 (9-109)||(8356958-8357057)
chr6 (10-109)||(1036846-1036944)
chr6 (9-99)||(31195888-31195977)
chr6 (9-115)||(7188798-7188900)
chr6 (11-109)||(3299141-3299238)
chr6 (2-100)||(13607797-13607894)
chr6 (2-109)||(26327155-26327260)
chr6 (2-109)||(27083985-27084091)
chr6 (9-109)||(3212477-3212576)
chr6 (11-100)||(32017986-32018074)
chr6 (9-109)||(32130678-32130777)
chr6 (2-99)||(19128163-19128259)
chr6 (2-109)||(6708053-6708159)
chr6 (9-100)||(25834515-25834605)
chr6 (10-100)||(13061325-13061414)
chr6 (36-109)||(10894619-10894690)
chr6 (2-42)||(31079737-31079777)
chr6 (7-42)||(7255056-7255091)
chr6 (47-109)||(29892966-29893028)
chr6 (49-100)||(31079621-31079672)
chr6 (2-32)||(10894533-10894563)
chr6 (67-113)||(31741232-31741278)
chr6 (7-40)||(19128290-19128323)
[»] scaffold0640 (1 HSPs)
scaffold0640 (9-109)||(8111-8210)
[»] scaffold0250 (1 HSPs)
scaffold0250 (9-100)||(5521-5611)
[»] scaffold0285 (1 HSPs)
scaffold0285 (2-100)||(13259-13356)
[»] scaffold0240 (1 HSPs)
scaffold0240 (2-109)||(10600-10706)
[»] scaffold0037 (1 HSPs)
scaffold0037 (49-115)||(27839-27905)
[»] scaffold0060 (1 HSPs)
scaffold0060 (9-109)||(30463-30562)
[»] scaffold0005 (1 HSPs)
scaffold0005 (49-114)||(44648-44713)
[»] scaffold0112 (1 HSPs)
scaffold0112 (49-109)||(42123-42183)
[»] scaffold0177 (1 HSPs)
scaffold0177 (49-116)||(25588-25655)
[»] scaffold0406 (1 HSPs)
scaffold0406 (54-109)||(13866-13921)


Alignment Details
Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 30284619 - 30284716
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  30284619 aatcttcggatactctcctgatacgtatcgggaagtatcaggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 30284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 33829852 - 33829749
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  33829852 ggatactctccggatacgtatcgggaagtatcaggcatg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 33829754  T
Q  109 agagc 113  Q
    |||||    
T  33829753 agagc 33829749  T

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Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26691722 - 26691625
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  26691722 aatcttcggatactctcttgatacgtatcgggaagtatcagacagg-tatcggtgcagaatacgcaggggatacgatacgtcatctattttgaagtatc 26691625  T

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Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26716379 - 26716282
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||||||||||||    
T  26716379 aatcttcggatactcttctgatacgtatcgggaagtatcaggcagg-tatcggtgtaggatacgcaggggatacgatacgtcatccattttgaagtatc 26716282  T

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Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26961454 - 26961357
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  26961454 aatcttcggatactctcttgatacgtatcgggaagtatcagacagg-tatcggtgcagaatacgcaggggatacgatacgtcatctattttgaagtatc 26961357  T

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Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 26986119 - 26986022
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||||||||||||    
T  26986119 aatcttcggatactcttctgatacgtatcgggaagtatcaggcagg-tatcggtgtaggatacgcaggggatacgatacgtcatccattttgaagtatc 26986022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32707850 - 32707949
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  32707850 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 32707948  T

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Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 41392731 - 41392830
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||| || ||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  41392731 ggatactccccggatacatatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatctggacttc 41392829  T

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Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 39690782 - 39690881
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  39690782 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 39690880  T

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Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 17138266 - 17138362
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  17138266 aatcttcggatattctcctgatacgtatcgggaagtatcaggca-attatcggtgcaggatacgcaggggatac-atacgtcatctattttgaagtatc 17138362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 30777541 - 30777645
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||| ||||||||| ||||||||||||| || ||||    
T  30777541 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaagggatacgatacgtcatccattttgaagtatcggggcttc 30777639  T
Q  109 agagct 114  Q
    | ||||    
T  30777640 acagct 30777645  T

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Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 1639801 - 1639900
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  1639801 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 1639899  T

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Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 1795498 - 1795392
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| | |||||||||| ||||||| | |||||||||||||     
T  1795498 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacggaggggatacgatacgtcaaccattttgaagtatcg 1795400  T
Q  102 ggacttca 109  Q
    || |||||    
T  1795399 gggcttca 1795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 10656919 - 10656820
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| || ||||    
T  10656919 ggatactctcccgatacgtatcgagaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcggggcttc 10656821  T

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Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 30918476 - 30918378
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||  ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||  ||||||||| ||||||||||||| || |||||    
T  30918476 gatactctccgaatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacaatacgtcatccattttgaagtatcggggcttca 30918378  T

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Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 11906320 - 11906227
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||| |||||| ||||  ||||||||| |||||||||||||    
T  11906320 ttcggatactctccggatacgtatcgggaagtatcggacag-atatcggtgcaggatacgcagggaatacaatacgtcatccattttgaagtatc 11906227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34032475 - 34032378
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||  | |||| ||| ||||| || ||| |||||||||||||||||||    
T  34032475 aatcttcggatactctcctgatacgtatcgggaagtatcaagcagg-tatcggtagatgatacgcaagggattcgatacatcatctattttgaagtatc 34032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 3934800 - 3934896
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||| ||||||||||   ||||||||| ||||| ||||||    
T  3934800 aatcttcggatactctcctgatacgtatcggtaagtatcaggtagg-tatcggtgcgggatacgcaggggatataatacgtcatccattttaaagtat 3934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 21251567 - 21251459
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||| ||||||| ||| | ||| |||||||||||||||| ||||| | ||||| ||||    
T  21251567 ttcggatactctcctgatacgtatcggaaagtatcagaca-gatattggtgcagaataagtaggagatacggtacgtcatccattttaatgtatcaggac 21251469  T
Q  106 ttcagagctt 115  Q
    |||| |||||    
T  21251468 ttcatagctt 21251459  T

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Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 42366115 - 42366211
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||| |||||||||| |||| ||||| |||| |||||| |||| |||||||||| ||||||||||| |||| ||||||||||||||||||    
T  42366115 aatcttcggatattctcctgataggtattgggaaatatcgggcagg-tatcagtgcaggatacgcaggggatacagtacatcatctattttgaagtat 42366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 9792418 - 9792319
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  |||||||||||||||||||| |||||| ||||| |||||||||  ||||||||||||||||||||| ||||| ||||||| || ||||    
T  9792418 ggatactctctggatacgtatcgggaagtatcgggcagg-tatcgatgcaggatacacaggggatacggtacgtcatccattttaaagtatcggggcttc 9792320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22774653 - 22774554
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||| || | ||||| |||||||  ||||||    
T  22774653 ggatactctctcgatacgtatcggaaagtatcgggcag-atatcggtgcaggatatgcaggggatacgatacgccaaccattttaaagtatcgagacttc 22774555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 32728728 - 32728818
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||| |||||||||||  ||| ||||| |||||||||||||    
T  32728728 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcgatgcaagatacgcaggggatacaatacatcatcaattttgaagtatc 32728818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 35746271 - 35746360
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| |||| |||| | ||| |||||  |||||||||||||||||||||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcagg-tatcgatgcatgatacgtaggagatacaatacgtcatctattttgaagtatc 35746360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 41233477 - 41233388
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||| || | ||||| ||||||||| | |||  ||||| ||||||||| |||||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatg-tatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 12852179 - 12852119
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  12852179 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 12852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 32624976 - 32624877
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| |  ||||||||||||||||||| |||||| ||||| |||| ||||  ||||||||||||||||||||| |||||||| |||| || ||||    
T  32624976 ggatactcttcgaatacgtatcgggaagtatcgggcagg-tatcgatgcaagatacacaggggatacggtacgtcatccattttgaaatatcggggcttc 32624878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 5722093 - 5722004
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||||||||||| |||||||| |||| | |||||||| |||| | |||| |||||||||| |||||||||||| ||||||||| |||||    
T  5722093 aatcttcggatactttcctgatatgtattgagaagtatcgggcatg-tatcagtgcaggatacgcaggggatacgatacgtcatcaatttt 5722004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 3701304 - 3701233
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggata 74  Q
    ||||||| ||||||||||||| || |||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  3701304 aatcttcagatactctcctgaaacatatcaggaagtatcagaca-gatatcggtgcaggatacgcaggggata 3701233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 1920942 - 1920864
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacg 81  Q
    ||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||| |||| |||  |||||| |||||    
T  1920942 aatcttcggatactctcccaatacgtatcgggaagtatcatgca-gatatcggtgcatgatacgcaatggataccgtacg 1920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 5612454 - 5612560
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||| |||||||| | ||||||| |||| | ||||  ||||||||   ||| | ||||| ||||||||| ||||||||||||||    
T  5612454 aatcttcggatactctcctggtacgtatcagaaagtatcgggca-gttatcaatgcaggatgcacagagaatacgatacgtcatccattttgaagtatct 5612552  T
Q  102 ggacttca 109  Q
    || |||||    
T  5612553 gggcttca 5612560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 14836483 - 14836390
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||| |||||||||||||| || |||| | ||  |||||| ||||||||| |||||||||||  ||||||| | |||||||||||||    
T  14836483 ttcggatactcttctgatacgtatcggaaaatatcggacaa-atatcgatgcaggatacgcaggggatacaatacgtcaaccattttgaagtatc 14836390  T

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Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 15066236 - 15066148
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||| | |||||||||||| || |||| ||||| |||||||||||| |||  || |||||||| ||| ||||||||||||||||||    
T  15066236 gatactcttccgatacgtatcggaaaatatcgggcag-atatcggtgcagaatacacatgggatacgatacatcatctattttgaagtat 15066148  T

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Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 26795051 - 26795116
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| || ||||| ||||    
T  26795051 tatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcagggcttcacagct 26795116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 7629165 - 7629125
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  7629165 aatcttcagatactctcctgatacgtatcgggaagtatcag 7629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 17138202 - 17138237
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  17138202 tcggatactctcctgatacgtatcgggaagtatcag 17138237  T

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Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 26716443 - 26716410
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  26716443 tcggatactctcctgatacgtatcgggaagtatc 26716410  T

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Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 26986183 - 26986150
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  26986183 tcggatactctcctgatacgtatcgggaagtatc 26986150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 43357771 - 43357831
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    ||||||||||||||||  | ||||||||||| ||||||||| |||| |||||||||||||||    
T  43357771 aatcttcggatactcttttaatacgtatcggaaagtatcagacagg-tatcggtgcaggata 43357831  T

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Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 6243216 - 6243267
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| |||| ||||||  ||||||||| |||||||||||||    
T  6243216 tatcggtgcaggatacgcagaggatacaatacgtcatccattttgaagtatc 6243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 25749776 - 25749741
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||||||||||||||| |||||||||    
T  25749776 tcggatactctcctgatacgtatcggaaagtatcag 25749741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 27938329 - 27938296
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||| ||||||||||    
T  27938329 tcggatactctcctgatacgtattgggaagtatc 27938296  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 42366055 - 42366087
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    ||||||||||||||||||| |||||||||||||    
T  42366055 tcggatactctcctgatacatatcgggaagtat 42366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 13422307 - 13422202
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||    
T  13422307 ggatactctccgtatacgtatcgggaagtatcaggcagg-tatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttc 13422209  T
Q  109 agagctt 115  Q
    | |||||    
T  13422208 acagctt 13422202  T

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Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 27886296 - 27886190
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||     
T  27886296 aatcttcggatactctcctgatacgtatcgggaagtatcaaccagg-tatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtatcg 27886198  T
Q  102 ggacttca 109  Q
    ||||||||    
T  27886197 ggacttca 27886190  T

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Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 27944954 - 27944848
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||     
T  27944954 aatcttcggatactctcctgatacgtatcgggaagtatcaaccagg-tatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtatcg 27944856  T
Q  102 ggacttca 109  Q
    ||||||||    
T  27944855 ggacttca 27944848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 2872929 - 2873028
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  2872929 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 2873027  T

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Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 4246039 - 4245940
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||    
T  4246039 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagcatcggggcttc 4245941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 27968211 - 27968101
Alignment:
Q  2 aatcttcggatac--tctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  27968211 aatcttcggatacgatctcctgatacgtatcgggaagtatcagccagg-tatcggtgcaggatatgcagggaatacaatacgtcatctatttttaagtat 27968113  T
Q  100 ctggacttcaga 111  Q
    | ||||||||||    
T  27968112 cgggacttcaga 27968101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 28025197 - 28025087
Alignment:
Q  2 aatcttcggatac--tctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  28025197 aatcttcggatacgatctcctgatacgtatcgggaagtatcagccagg-tatcggtgcaggatatgcagggaatacaatacgtcatctatttttaagtat 28025099  T
Q  100 ctggacttcaga 111  Q
    | ||||||||||    
T  28025098 cgggacttcaga 28025087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 32759472 - 32759382
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  32759472 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32759382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 32425027 - 32424930
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  32425027 aatcttcggatactcttctgatacgtatcgtgaagtatcagacagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 32424930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 37372365 - 37372268
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  37372365 aatcttcggatactctcctgatacgtatcgggaagtatcagacagg-tatcagtgcaggatacgcaggagatacgatacgtcatccattttgaagtatc 37372268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 22201356 - 22201455
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||    
T  22201356 ggatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcgggacttc 22201454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 32877536 - 32877437
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  32877536 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 32877438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 12580572 - 12580678
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||| |||||||||| ||||||||||||||||||| || ||||    
T  12580572 ggatactctccggatacgtatcgggaagtatcagacagt-tatcggtgcaggatacgcaggagatacggtacatcatctattttgaagtatcggggcttc 12580670  T
Q  109 agagcttt 116  Q
    | ||||||    
T  12580671 acagcttt 12580678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 34901402 - 34901500
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  34901402 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 34901500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 6028586 - 6028487
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||| ||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  6028586 ggatactctcccgatatgtatcggaaagtatcgggcag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 6028488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 16384716 - 16384617
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||| || ||||    
T  16384716 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatactcaggggatacggtacgtcatccattttgaagtatcggggcttc 16384618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 36483534 - 36483435
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  36483534 ggatactcttcggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 36483436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 28876585 - 28876684
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  ||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  28876585 ggatactctctggatacgtatcgagaagtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 28876683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 43771723 - 43771813
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||| ||||||||| | || | ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  43771723 ggatactctccggatacgtatcaggaagtatcggacatg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 43771813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 5818323 - 5818420
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||| ||| | |||||| ||||||||| |||||||||||||    
T  5818323 aatcttcagatactctcctgatacatatcgggaaatatcatgcagg-tatcggtgcaggatacgcaagtgatacgatacgtcatccattttgaagtatc 5818420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 25022224 - 25022135
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| ||||| ||||||||| |||||| ||||||||||||    
T  25022224 ggatactctcccgatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggagatacggtatgtcatccattttgaagtat 25022135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 19948015 - 19948105
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| | ||||||||||||||||||  ||||| ||||||||||||||| |||||||||| | ||||||||| |||||||||||||    
T  19948015 ggatactctcccggtacgtatcgggaagtatcgagcagg-tatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtatc 19948105  T

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Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 29355729 - 29355623
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| | ||||| |||||||||  ||||||||| | || |||||| |||||||||||||     
T  29355729 aatcttcggatactctcctgctacgtatcgggaagtatcaagca-gctatcgatgcaggatacccaggggatatgatatgtcatccattttgaagtatca 29355631  T
Q  102 ggacttca 109  Q
    || |||||    
T  29355630 gggcttca 29355623  T

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Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 23265755 - 23265649
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||||||| |||  | || |||||| |||||| ||| ||||| ||||||||| ||| |||||||| |||||| |    
T  23265755 aatcttcggatactctcctgatacgtatcgggaaatattggaca-gatatcagtgcagaatacgcaggagatacggtatgtcgtctattttaaagtattt 23265657  T
Q  102 ggacttca 109  Q
    || |||||    
T  23265656 gggcttca 23265649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 19436356 - 19436283
Alignment:
Q  26 gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| | |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  19436356 gtatcgggaagtatcggtcagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 19436283  T

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Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 19572505 - 19572432
Alignment:
Q  26 gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| | |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  19572505 gtatcgggaagtatcggtcagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 19572432  T

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Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 32638902 - 32638965
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  32638902 gtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32638965  T

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Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 20182479 - 20182383
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||| |||||||||||||  ||||||||| ||| |||| | ||||||||||||| ||||||| |||||||||| || ||||||||||    
T  20182479 aatcttcagatactctactgatacgtatcgaaaagtatcagacag-atatag-tgcaggatatgcacgggataccgtacgtcatccatcttgaagtatc 20182383  T

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Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 37668664 - 37668591
Alignment:
Q  26 gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| ||| |||| |||||| |||| |||||| ||||||||||||||| |||||||||||||    
T  37668664 gtatcgggaagtatcagacag-atattggtgcaagatacgcagggaatacggtacgtcatccattttgaagtatc 37668591  T

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Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 38388773 - 38388676
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||| |||||| |||||||| |||||||| | |||| ||||||||||||||| |||| ||||||  |||  |||| |||||||||||||    
T  38388773 aatcttcggatactttcctgacacgtatcgagaagtatcggacagg-tatcggtgcaggatacgcagaggatacaatacagcatccattttgaagtatc 38388676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 45217239 - 45217338
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| || |||| | |||| ||||||||||||||| |||||||||||  ||  ||||| ||||| ||||||| || ||||    
T  45217239 ggatactctccggatacgtatcggaaaatatcggacagg-tatcggtgcaggatacgcaggggatacaatatatcatccattttaaagtatcggggcttc 45217337  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 12357950 - 12357883
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||||| || ||||| |||||    
T  12357950 gatatcggtgcaggatacacagaggatacg-tacgtcatccattttgaagtatccgggcttcatagctt 12357883  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 12359078 - 12359011
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    |||||||||||||||||  ||| ||||||| ||||||||| ||||||||||||| || ||||| |||||    
T  12359078 gatatcggtgcaggatacacagaggatacg-tacgtcatccattttgaagtatccgggcttcatagctt 12359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 3892134 - 3892099
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3892134 tcggatactctcctgatacgtatcgagaagtatcag 3892099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 30804761 - 30804855
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||| |||||||  |||  |||| | |||| |||| |||||  ||||  ||||||||||||||| || |||||    
T  30804761 ttcggatactctcctgatacgtatcggaaagtatcgagca-aatattgatgcaagatacgcaggatatacaatacgtcatctattttaaattatct 30804855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 40412492 - 40412445
Alignment:
Q  52 cggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  40412492 cggtgcaggatacgcaggggatacgatacatcatccattttgaagtat 40412445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 32425091 - 32425058
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  32425091 tcggatactctcctgatacatatcgggaagtatc 32425058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 37372430 - 37372397
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||| ||||||||||    
T  37372430 tcggatactctcctgatacgtattgggaagtatc 37372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 10349350 - 10349310
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||| |||||| ||||||||||||||| ||||||||||    
T  10349350 aatcttcagatactttcctgatacgtatcgagaagtatcag 10349310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 24100205 - 24100249
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcag 46  Q
    |||||||||||||||||||||||| |||||| || ||||| ||||    
T  24100205 aatcttcggatactctcctgatacatatcggaaaatatcatgcag 24100249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 2472871 - 2472963
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2472871 tcggatactctcctgatacgtatcggaaagtatcaggcagg-taccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatc 2472963  T

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Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 20409573 - 20409676
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  20409573 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 20409671  T
Q  109 agagc 113  Q
    |||||    
T  20409672 agagc 20409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 29168053 - 29167957
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||| | ||||||||| ||||||||||||    
T  29168053 aatcttcggatactctcctgatacgtaacgggaagtatcatgcagg-tatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtat 29167957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 1043326 - 1043227
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  1043326 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttc 1043228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 6916894 - 6916997
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  6916894 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 6916992  T
Q  110 gagct 114  Q
     ||||    
T  6916993 cagct 6916997  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 28949260 - 28949359
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  28949260 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 28949358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 37346867 - 37346966
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||| || |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  37346867 ggatactcccccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 37346965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 43189754 - 43189655
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  43189754 ggatactctcctgatacgtatcgagaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcgggtcttc 43189656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 9781748 - 9781642
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||| ||||||| | |||||||||||||     
T  9781748 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaagtatca 9781650  T
Q  102 ggacttca 109  Q
    || |||||    
T  9781649 gggcttca 9781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 38330525 - 38330427
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  38330525 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 38330427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 52895733 - 52895831
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  52895733 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 52895831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 1036558 - 1036469
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1036558 ggatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 1036469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 37104219 - 37104120
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  37104219 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 37104121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 8132282 - 8132192
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||||||||||||||   || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8132282 ggatactctccggatacgtatcgggaagtatcgaacatg-tatcggtgcaggatacgcaggggatacggtacgtcatctattttgaagtatc 8132192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 14167190 - 14167084
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||| ||||| |||||| || |||||| |||||||||||||     
T  14167190 aatcttcggatactcttctgatacgtatcaggaagtatcagacag-atatcggtgcaggatacgcaggtgatacgataagtcatccattttgaagtatcg 14167092  T
Q  102 ggacttca 109  Q
     |||||||    
T  14167091 agacttca 14167084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 34432395 - 34432492
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||| |||| |||||||||||  ||||||||| |||||||||||||    
T  34432395 aatcttcggatactctcctgatacgtatcaggaagtatcaggca-gataccagtgcatgatacgcaggggatacaatacgtcatccattttgaagtatc 34432492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40776101 - 40775992
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||| |||| ||||||||||| |||||||||||  |||||| || ||||||||||||||    
T  40776101 aatcttcggatactcgcctgatacgtatcgagaagtatcatgcag-atattggtgcaggatacgcaggggatacattacgtcttccattttgaagtatct 40776003  T
Q  102 ggacttcagag 112  Q
    || ||| ||||    
T  40776002 gggctttagag 40775992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 2364783 - 2364683
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||  |||||| ||||| ||||||||| |||||||||| ||||||| ||| ||||||||||||||    
T  2364783 aatcttcggatactcttctgatacgtatcggaaagtattgggcagg-tatcgatgcaggatacgcaggggatatggtacgttatccattttgaagtatct 2364685  T
Q  102 gg 103  Q
    ||    
T  2364684 gg 2364683  T

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Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 32381071 - 32381168
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  |||| |||||| ||||||||||||||||||||  ||||| ||||| |||||||    
T  32381071 aatcttcggatactctcctgatacgtattgggaagtatcagaca-aatattggtgcatgatatgcaggggatacggtatatcatccattttaaagtatc 32381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5984326 - 5984236
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||| ||||||||||| ||| | ||||||||||| ||| ||||||||||| |||||||||| |||||||||||||    
T  5984326 ggatactctccagatacgtattgggaagtatcaagcatg-tatcggtgcagaatacgcaggggatacagtacgtcatccattttgaagtatc 5984236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 10822509 - 10822411
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatc-ggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||| | ||||||||||||||||| || |||||| ||||||||||| |||||| ||| | ||||||||| |||||||||||||    
T  10822509 aatcttcggatactctcctgagatgtatcgggaagtatcagaca-gatatcgggtgcaggatacgcagggaatatgatacgtcatccattttgaagtatc 10822411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 38948819 - 38948741
Alignment:
Q  21 gatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||  ||||| |||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  38948819 gatacgtatcgagaagtattgggcag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatc 38948741  T

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Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 3708295 - 3708388
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||| |||||||||||||||||||||  ||||||| |||| | ||| |||| ||||||||||| ||||||| ||||||||| |||||||||||||    
T  3708295 ttcgaatactctcctgatacgtatcgaaaagtatcgggcatg-tattggtgtaggatatgcagaggatacgatacgtcatccattttgaagtatc 3708388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 13013011 - 13013100
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||||||||||||| |||||| |||| ||||| ||||  ||||||||||| || |||||| ||||||||||||    
T  13013011 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcagtgcatgatacacaggggatacgatatgtcatccattttgaagtat 13013100  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 48715237 - 48715334
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| |||||||||||||||||||||||||||| ||| || |||||||| |||||| ||||| |||||| |||   ||| |||||||||||||    
T  48715237 aatcttcggacactctcctgatacgtatcgggaagtatcgggccgg-tatcggtgtaggatacgcaggagatacgatacaatatccattttgaagtatc 48715334  T

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Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 25256713 - 25256625
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||| |||||||||||||||||||| | |||| ||||||||||| ||| |||| |||||| |||||||||| |||||||| ||||    
T  25256713 atactctccggatacgtatcgggaagtatcggacagg-tatcggtgcagaatacgcagaggatacagtacgtcatccattttgaaatatc 25256625  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 36367738 - 36367810
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  36367738 gtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcaggacttca 36367810  T

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Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 3426947 - 3426848
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| | || | ||||||||||||||| |||||||||||  ||||||||| ||||| ||||||| || ||||    
T  3426947 ggatactctccggatacgtatcaggaagtatcggacatg-tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggggcttc 3426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 28659319 - 28659410
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||| |||||||||||| ||||||| |||| | |||||||||| |||| |||||| |||| |||||||||| ||||| ||||||||    
T  28659319 ggatactctccggatacgtatcggaaagtatcgggcatg-tatcggtgcatgatacgcagggaataccgtacgtcatccattttaaagtatct 28659410  T

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Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 31653421 - 31653520
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||  || |||||||| ||| | ||| ||||||||||||| || ||||    
T  31653421 ggatactctcccgatacgtatcgggaagtatcgggca-gatatcggtgcatgatacacaagggatacgatacattatccattttgaagtatcagggcttc 31653519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 30323814 - 30323724
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||  ||| | ||||| | ||||||| |||||||||||||    
T  30323814 ggatactctccagatacgtatcgggaagtatcgggca-gatatcagtgcaggatacacagagaatacgttgcgtcatccattttgaagtatc 30323724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2222991 - 2223100
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| ||||||||||||||||||||||| || |||||| |||| |||||||| ||||||  || |  ||||| ||| ||||||||||| ||||||||    
T  2222991 aatcttcagatactctcctgatacgtatcggaaaatatcagacagg-tatcggtgtaggatacacatgaaatacgttacatcatctattttaaagtatct 2223089  T
Q  102 ggacttcagag 112  Q
    |  ||||||||    
T  2223090 gagcttcagag 2223100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29861908 - 29861801
Alignment:
Q  1 aaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||| | | |||||| |||| | ||| |||||  ||||||| | |||||||||||||    
T  29861908 aaatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatc 29861810  T
Q  101 tggacttca 109  Q
     || |||||    
T  29861809 ggggcttca 29861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 9528851 - 9528943
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaa 95  Q
    ||||||| |||||| ||| |||||||||||||||||||||  |||| |||||||||| ||||  || |||||||  ||||||||| ||||||||    
T  9528851 aatcttcagatactatcccgatacgtatcgggaagtatcaaacagg-tatcggtgcaagatacacaagggatacaatacgtcatccattttgaa 9528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 10763765 - 10763670
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||   || |||| |||| ||||| ||||||||  |||||||||||||| ||||||| | ||||| |||||||    
T  10763765 aatcttcggatactcttctgatacgtatcaaaaaatatcgggca-gatattggtgcagg--atgcaggggatacgatacgtcaaccattttaaagtatc 10763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 24849408 - 24849373
Alignment:
Q  65 gcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||||||    
T  24849408 gcaggggatacggtacgtcatctattttgaagtatc 24849373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 34096564 - 34096670
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||| ||||| |||||  | |||||||  |||| |||||||||||||||| |||||||||||| |||||||   |||||||| ||||     
T  34096564 aatcttcagatactcttctgatgcgtattagaaagtatcgcgcag-atatcggtgcaggatacgcaggggatacgatacgtcaatcattttgaaatatcg 34096662  T
Q  102 ggacttca 109  Q
    || |||||    
T  34096663 gggcttca 34096670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 41676001 - 41676090
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||||||||||||| |  |||| |||  ||||||||| | |||| |||||||||| |||| ||||| |||||||||||||||| |||||    
T  41676001 aatcttcggatactcttccaatacatattaggaagtatcggacagg-tatcggtgcatgatacgcaggagatacggtacgtcatccatttt 41676090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 9528791 - 9528826
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||| |||||||||||||||||||||    
T  9528791 tcggatactctcctaatacgtatcgggaagtatcag 9528826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 9781812 - 9781779
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  9781812 tcggatactttcctgatacgtatcgggaagtatc 9781779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 24851644 - 24851611
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||| ||||||||||||||||    
T  24851644 tcggatactctcctgatgcgtatcgggaagtatc 24851611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 33039782 - 33039749
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||| |||||||||||||||||||    
T  33039782 tcggatactctcctcatacgtatcgggaagtatc 33039749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 9092505 - 9092533
Alignment:
Q  2 aatcttcggatactctcctgatacgtatc 30  Q
    |||||||||||||||||||||||||||||    
T  9092505 aatcttcggatactctcctgatacgtatc 9092533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 38218447 - 38218407
Alignment:
Q  60 gatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||| ||| |||||||||||||||||| |||||||||||||    
T  38218447 gatacgcaagggatacggtacgtcatccattttgaagtatc 38218407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 41675937 - 41675969
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  41675937 tcggatactctcctgataagtatcgggaagtat 41675969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 4170521 - 4170611
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  4170521 ggatactctccggatacgtatcgggaagtatcaggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 4170611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 35342423 - 35342317
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||| |||||||||||||     
T  35342423 aatcttcggatactcttttgatacgtatcgggaagtatcaggtagg-tatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcg 35342325  T
Q  102 ggacttca 109  Q
    ||||||||    
T  35342324 ggacttca 35342317  T

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Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 37134310 - 37134422
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||  |||||||| |||||||||||||||||||||| |||| ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37134310 aatcttcatatactctcttgatacgtatcgggaagtatcaagcag-atatcagtgcaggatacgcagaggatacggtacgtcatctattttgaagtatct 37134408  T
Q  102 ggacttcagagctt 115  Q
    || ||| |||||||    
T  37134409 gggctttagagctt 37134422  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 6497668 - 6497767
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  6497668 ggatactctccggatacgtatcgggaagaatcagacagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttc 6497766  T

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Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 7876813 - 7876714
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  7876813 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 7876715  T

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Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 38602341 - 38602440
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  38602341 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 38602439  T

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Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 40308916 - 40309015
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||    
T  40308916 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcatgggatacggtacgtcatctattttgaagtatcggggcttc 40309014  T

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Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22571036 - 22570937
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||| || |||||||||| ||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  22571036 ggatactccccggatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcagaggatacggtacgtcatctattttgaagtatctgggcttc 22570938  T

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Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 33324917 - 33324818
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  33324917 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttc 33324819  T

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Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 16561899 - 16561800
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||| ||| ||| |||||||||||||||||| ||||||||||||| || ||||    
T  16561899 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcagaatacgcaagggatacggtacgtcatccattttgaagtatcggggcttc 16561801  T

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Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 43214680 - 43214566
Alignment:
Q  2 aatcttcggatactctcctgatac--gtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||||||||||   ||||||||||||||| | ||| |||||| |||||||||  || |||||||| ||||||||| ||||||||||||    
T  43214680 aatcttcggatactctcctgatatatgtatcgggaagtatcggtcag-atatcgatgcaggatacacatgggatacgatacgtcatccattttgaagtat 43214582  T
Q  100 ctggacttcagagctt 115  Q
    ||||||||||||||||    
T  43214581 ctggacttcagagctt 43214566  T

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Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 28746664 - 28746770
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||| ||||||||||||||| |||||||||||| ||||||| | |||||||||||||     
T  28746664 aatcttcggatactcttctgatacgtatcgaaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaagtatcg 28746762  T
Q  102 ggacttca 109  Q
    || |||||    
T  28746763 gggcttca 28746770  T

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Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 2319381 - 2319284
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| |||||||||||| |||||||||| ||| | |||||||||| |||| |||||||||||| ||||||||| |||||||||||||    
T  2319381 aatcttcggatactcttctgatacgtatcaggaagtatcaagcaag-tatcggtgcaagatacgcaggggatacgatacgtcatccattttgaagtatc 2319284  T

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Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 4355431 - 4355334
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  4355431 aatctttgcatactctcctgatacgtatcgggaagtatcaagcagg-tatcggtgcagaatacgcagggaatacgatacgtcatccattttgaagtatc 4355334  T

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Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34146286 - 34146189
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||  |||||| ||||||||| ||||| |||||||    
T  34146286 aatctttggatactctcctgatacgtatcgggaagtatcaggca-gatatcggtgcagaatacgcagaagatacgatacgtcatccattttaaagtatc 34146189  T

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Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 44156703 - 44156606
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || | ||||| |||| |||| |||||||||||| || |||||| |||||||||||||    
T  44156703 aatcttcggatactctcctgatacgtatcgggaagtatcagacatg-tatcgatgcatgatacgcaggggatacgatatgtcatccattttgaagtatc 44156606  T

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Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 8482929 - 8483033
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||| |||  ||||||| ||||||||  |||||||||||||     
T  8482929 aatcttcggatactcttctgatacgtatcggaaagtatcagaca-gatatcggtgcaggatacgcaaaggatacgatacgtcattcattttgaagtatcg 8483027  T
Q  102 ggactt 107  Q
    ||||||    
T  8483028 ggactt 8483033  T

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Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 1005618 - 1005522
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||| || ||||||||||||||||||| | |||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  1005618 aatcttcagatactcttctaatacgtatcgggaagtatc-gacagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 1005522  T

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Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 4561894 - 4561798
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||  || || ||||| ||||||||| ||||||||||||    
T  4561894 aatcttcggatactcttctgatatgtatcgggaagtatcgggcagg-tatcggtgcaggatacacaaggaatacgatacgtcatccattttgaagtat 4561798  T

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Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 24585635 - 24585528
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||| |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||| ||| |||||||| ||| ||||| |||||||||||||     
T  24585635 aatctttggatacactcctgatacgtatctggaagtatcagacagg-tatcggtgcaggatacgca-gggatacgatacatcatccattttgaagtatcg 24585538  T
Q  102 ggacttcaga 111  Q
    || |||||||    
T  24585537 gggcttcaga 24585528  T

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Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 18301071 - 18300972
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||||||||||| |||  ||||||||||| ||||||||| ||||||||||||| || ||||    
T  18301071 ggatactctcccgatacgtatcgagaagtatcagacagg-tatcggtgcagaatacacaggggatacgatacgtcatccattttgaagtatcagggcttc 18300973  T

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Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22484366 - 22484267
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| | ||| |||||| ||||||||| |||||| ||||||||| ||||| ||||||||||||| || ||||    
T  22484366 ggatactctccggatacgtatcgggaagtatcggacag-atatcgatgcaggatacgcagggaatacggtacatcatccattttgaagtatcggggcttc 22484268  T

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Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 31236198 - 31236304
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| | | ||||||||||| |||||||||||  ||||| ||| ||||| |||||||     
T  31236198 aatcttcggatactctcctgatacgtatcgggaaatatcatgcagg-tgtgggtgcaggatacgcaggggatacaatacgttatccattttaaagtatcg 31236296  T
Q  102 ggacttca 109  Q
    || |||||    
T  31236297 gggcttca 31236304  T

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Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 25933671 - 25933562
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||  |||||| ||||||||||  || |||| |||||| |||| |||||||||||| ||| ||||| |||||||||||| |    
T  25933671 aatcttcggatactctcctgatctgtatcgagaagtatcagatag-atattggtgcatgatacgcaggggatacgatacatcatccattttgaagtatat 25933573  T
Q  102 ggacttcagag 112  Q
    || ||||||||    
T  25933572 gggcttcagag 25933562  T

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Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 40497397 - 40497486
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||||  |||| |||| |||||||||| ||||||||||| |||||    
T  40497397 aatctttggatactctcctgatacgtatcgggaagtatcagacagg-tatcactgcaagatacgcaggggataaggtacgtcatccatttt 40497486  T

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Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 1776448 - 1776554
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||  ||| |||||| ||||||||||| ||| ||| |||||||| ||||||| | |||||||||||||     
T  1776448 aatcttcggatactcttctgatacgtatcggaaatgatcgggcagg-tatcggtgcagaatacgcaagggatacgatacgtcaaccattttgaagtatcg 1776546  T
Q  102 ggacttca 109  Q
    || |||||    
T  1776547 gggcttca 1776554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 14217174 - 14217263
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| |||||||||||| ||||||||  ||| |||||||||||| ||| |||||||||||  ||||||||| |||||||||||||    
T  14217174 gatactctccagatacgtatcggaaagtatcaaacag-atatcggtgcagaatacgcaggggatacaatacgtcatccattttgaagtatc 14217263  T

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Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21104588 - 21104492
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||   |||||||||||||||| |||||| ||| ||||||||||| |||| |||| ||||||| ||||||||| ||||| ||||||    
T  21104588 aatcttcggatactcctttgatacgtatcgggaaatatcagacag-atatcggtgcaagatacgcagaggatacgatacgtcatccattttaaagtat 21104492  T

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Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 7807393 - 7807492
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||| ||| ||||||||||||||||||||   |||| ||||||| || |||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  7807393 ggatactttccggatacgtatcgggaagtatcgaacagg-tatcggtacaagatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 7807491  T

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Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 20536835 - 20536775
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |||||    
T  20536835 tatcggtgcaggatatgcaggggatacgatacgtcatccattttgaagtatcggggcttca 20536775  T

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Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 3563946 - 3563906
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3563946 aatcttcggatactctcctgatacgtatcgggaagtatcag 3563906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 6124272 - 6124173
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| | || | |||||||||||||||  ||||||||||  ||||||||| ||||| ||||||| || ||||    
T  6124272 ggatactctccggatacgtatcaggaagtatcggacatg-tatcggtgcaggatacacaggggatacaatacgtcatccattttaaagtatcggggcttc 6124174  T

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Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 3545593 - 3545690
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||| ||||| |||||||||| || | ||||||||||| ||| | |   |||||| ||||||||| |||||||||||||    
T  3545593 aatcttcggatgctctcctgatacatatcgagaagtatcagacaag-tatcggtgcagaatacgtaaaagatacgatacgtcatccattttgaagtatc 3545690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 14824210 - 14824148
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||| |||| ||| | |||||| ||||||||||||||||||||||| ||||||||    
T  14824210 gatatcggtgcatgatacgcaagagatacgatacgtcatctattttgaagtatcgggacttca 14824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 35996749 - 35996652
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||| |||||||||||||||||||||  |||||||   |||| |||||||||| |||| |||||||||||  ||| ||||  |||||||||||||    
T  35996749 aatcttcgaatactctcctgatacgtatcgaaaagtatcgaacagg-tatcggtgcaagatacgcaggggatacaatacatcattcattttgaagtatc 35996652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 4561959 - 4561924
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  4561959 tcggatactctcctgatacgtatcgggaagtatcag 4561924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5588206 - 5588116
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| ||||| ||||| |||||||| || |||| |||||||||| ||||   || ||||||| ||||||||| |||||||||||||    
T  5588206 ggatactctcatgatatgtatcaggaagtatgagacagg-tatcggtgcaagatacaaagaggatacgatacgtcatccattttgaagtatc 5588116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 35342488 - 35342453
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  35342488 tcggatactctcctgatacgtatcgggaagtatcag 35342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 14217098 - 14217131
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  14217098 tcggatactctcctgatacgtatcgggaagtatc 14217131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 12206131 - 12206036
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    |||||||| ||||||||||||||||||| |  || ||||||||||| ||||| |||| ||||  |||  |||||| ||||||||| ||||| |||||    
T  12206131 aatcttcgaatactctcctgatacgtattgaaaaatatcaggcagg-tatcgatgcaagatacacagatgatacgatacgtcatccattttaaagta 12206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 3564010 - 3563975
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3564010 tcggatactcttctgatacgtatcgggaagtatcag 3563975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15880545 - 15880510
Alignment:
Q  1 aaatcttcggatactctcctgatacgtatcgggaag 36  Q
    |||||||||||||||||||||||||||||| |||||    
T  15880545 aaatcttcggatactctcctgatacgtatcaggaag 15880510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 31236137 - 31236167
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||||||    
T  31236137 gatactctcctgatacgtatcgggaagtatc 31236167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 45159354 - 45159416
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||| |||||| |||| ||| |||||||| ||||||||| ||||||||||||| || |||||    
T  45159354 gatattggtgcaagatacgcaagggatacgatacgtcatccattttgaagtatcggggcttca 45159416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 2319445 - 2319412
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||| |||||    
T  2319445 tcggatactctcctgatacgtatcgggacgtatc 2319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 3563906 - 3563849
Alignment:
Q  54 gtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcaga 111  Q
    |||||| ||||| |||||||||  ||||||||| ||||||||||||| || |||||||    
T  3563906 gtgcagaatatgtaggggatacaatacgtcatccattttgaagtatcggggcttcaga 3563849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 12819354 - 12819301
Alignment:
Q  56 gcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||  ||||||||||||||| ||||| ||||||||||||| || |||||    
T  12819354 gcaggatacacaggggatacggtacatcatccattttgaagtatcagggcttca 12819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 14824309 - 14824276
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||| ||||    
T  14824309 tcggatactctcctgatacgtatcgggaaatatc 14824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 34146350 - 34146317
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||| |||||||||    
T  34146350 tcggatactctcctgatacgtatcaggaagtatc 34146317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 52721363 - 52721259
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||    
T  52721363 ggatactctccgaatacgtatcgggaagtatcaggcag-atatcggtgcaggatacgcaggggatacgatacgtcatctattttgaagtat-tgggcttc 52721266  T
Q  109 agagctt 115  Q
    |||||||    
T  52721265 agagctt 52721259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 19738796 - 19738706
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  19738796 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 19738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 5834929 - 5834813
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |  ||||    
T  5834929 ggatactctcccgatacgtatcgggaagcatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggagcttc 5834831  T
Q  109 agagctttaaagtaacaa 126  Q
    | |||||| | |||||||    
T  5834830 acagctttcacgtaacaa 5834813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 52122888 - 52122987
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  52122888 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 52122986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 8064129 - 8064227
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  8064129 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 8064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 46431945 - 46432042
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||| |||||||||  ||||||||||||    
T  46431945 aatctttggatactctcttgatacgtatcgggaagtatcagtcagg-tatcgttgcaggatatgcagaggatacgatacgtcatccgttttgaagtatc 46432042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 5325740 - 5325839
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||  ||||||||| ||||| ||||||| || ||||    
T  5325740 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggggcttc 5325838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 42472588 - 42472687
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||| |||||||||| |||| | ||||||||||||||| |||||| |||| |||||||||| ||||||||||||| |||||||    
T  42472588 ggatactctccggatacgtattgggaagtatcgggcaag-tatcggtgcaggatacgcagggaatacagtacgtcatccattttgaagtatcgggacttc 42472686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 40694176 - 40694070
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||||| ||| ||| |||||||| ||| ||||| |||||||||||||     
T  40694176 aatcttcagatactctcctgatacgtatcgggaagtatcaatcagg-tatcggtgcagaatacgcatgggatacgatacatcatccattttgaagtatcg 40694078  T
Q  102 ggacttca 109  Q
    || |||||    
T  40694077 gggcttca 40694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 1177083 - 1176981
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    |||||||||||| ||||||| |||||| ||||||| |||||| ||| ||||||||||| | |||||||||| ||||||| ||||||||||||||| || |    
T  1177083 ttcggatactcttctgatacatatcggaaagtatcgggcagg-tatgggtgcaggatacgtaggggatacgatacgtcaactattttgaagtatcggggc 1176985  T
Q  106 ttca 109  Q
    ||||    
T  1176984 ttca 1176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 2586442 - 2586336
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| ||||||||||| || ||||||| |||||| | |||||| ||||||  ||||||||||||||||||||| ||||| |||||||     
T  2586442 aatcttcggatactcttctgatacgtattggaaagtatcgggcagg-tgtcggtgaaggatactcaggggatacggtacgtcatccattttaaagtatcg 2586344  T
Q  102 ggacttca 109  Q
    || |||||    
T  2586343 gggcttca 2586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 17892354 - 17892257
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||| |||||||| | |||| ||| | ||||||||||||| || |||||||||||||    
T  17892354 aatcttcggatactcttctgatacatatcgggaagtatcgggcagg-tatcggtgtatgatacgcatgagatacggtacgtcgtccattttgaagtatc 17892257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 55901151 - 55901248
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||| | ||||||||||||||| |||||||| || | | |||||||||||||||  ||||||||||| ||||||||||||||| |||||||    
T  55901151 aatcttcggatattttcctgatacgtatcgagaagtatcgggtatg-tatcggtgcaggatacacaggggatacgatacgtcatctattttaaagtatc 55901248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 41145711 - 41145612
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  ||||||||||| ||||||| | |||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||    
T  41145711 ggatactctccgaatacgtatcggaaagtatcggacagg-tatcgatgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttc 41145613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 21637771 - 21637665
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||| ||||  ||||| |||   ||||| || || |||||||| ||||||||||||||    
T  21637771 aatcttcggatactctcctgatacgtatcgggaagtataagagagg-tatcaatgcagaatacatagggggtatgggacgtcatccattttgaagtatct 21637673  T
Q  102 ggacttca 109  Q
    ||||||||    
T  21637672 ggacttca 21637665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 36511946 - 36512052
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||| | |||||| |||||||| ||| |||||||  ||||||| | |||||||||||||     
T  36511946 aatcttcggatactcttctgatacgtatcggaaagtatcgggcaag-tatcggcgcaggatacgcacgggatacaatacgtcaaccattttgaagtatcg 36512044  T
Q  102 ggacttca 109  Q
    || |||||    
T  36512045 gggcttca 36512052  T

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Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 47607215 - 47607110
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| ||| ||||||||||||||||| |||| ||||||||| |||||| |||||||||| ||||| |||||| || |||||| |||||||||||||     
T  47607215 aatcttcagatgctctcctgatacgtatcaggaaatatcaggca-gatatc-gtgcaggatacgcaggagatacgatatgtcatccattttgaagtatcg 47607118  T
Q  102 ggacttca 109  Q
    || |||||    
T  47607117 gggcttca 47607110  T

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Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 51858933 - 51858828
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgc-aggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||| ||||| |||||| ||||||||| ||||| ||||||| || |    
T  51858933 tcggatactctcctgatacgtatcgggaagtatcagacagg-tatc-gtgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcggggc 51858836  T
Q  106 ttcagagc 113  Q
    || |||||    
T  51858835 ttgagagc 51858828  T

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Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14795083 - 14795018
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||    
T  14795083 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 14795018  T

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Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 27982002 - 27981903
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||  |||||||| ||||||||||||  ||||||||| ||| ||||||||| |||||  ||||| |||||| ||||||||| ||||||||||||||    
T  27982002 aatcttcaaatactctcttgatacgtatcgaaaagtatcagacag-atatcggtggaggatgcgcaggagatacgatacgtcatccattttgaagtatct 27981904  T

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Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 38492305 - 38492380
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagag 112  Q
    ||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || ||||||||    
T  38492305 gtatcgggcagg-tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcagag 38492380  T

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Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 53322436 - 53322337
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||||||||||||  || || |||| |||||||||| |||  ||||||| ||||||||| ||||||||||||| || ||||    
T  53322436 ggatactctccggatacgtatcgggaagtatcgagccgg-tatcagtgcaggatacgcaaaggatacgatacgtcatccattttgaagtatcggggcttc 53322338  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21058939 - 21058843
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||| ||||||||||| ||||||||||||||| |||||| || | |||||||||||||||  ||| ||||||| ||||||||  ||||| ||||||    
T  21058939 aatctttggatactctccagatacgtatcgggaaatatcagacatg-tatcggtgcaggatacacagtggatacgctacgtcattcattttaaagtat 21058843  T

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Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 28377095 - 28376996
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| | |||||||||  ||||||| || ||| |||||||||||||||  |||| |||||| ||||||||| ||||||||||||| || ||||    
T  28377095 ggatactctcccggtacgtatcgaaaagtatcgggtagg-tatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatcggggcttc 28376997  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 44521994 - 44522084
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    |||||||||||||||||||||||||| || |||||  || ||||||||||||| ||||||||| ||||   ||| ||||| |||||||||||    
T  44521994 tcggatactctcctgatacgtatcggaaaatatcaaaca-gatatcggtgcagaatatgcaggagatataatacatcatccattttgaagta 44522084  T

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Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 3403631 - 3403683
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||| ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  3403631 gatatcagtgcaggatacacaggggatacggtacgtcatccattttgaagtat 3403683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 37992545 - 37992640
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    |||||| ||||||||| |||||||||||||| ||||||||| || | |||||||||| |||  ||| |||||||  |||||| || |||||||||||    
T  37992545 aatctttggatactcttctgatacgtatcggaaagtatcagacatg-tatcggtgcaagatccgcaagggatacaatacgtcttccattttgaagta 37992640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 51674918 - 51674867
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||| |||||| ||||||||| |||||| |||||||||||||||||||||||    
T  51674918 tatcagtgcagaatatgcaggagatacgatacgtcatctattttgaagtatc 51674867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 4400566 - 4400473
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctgga 104  Q
    ||||||||||||||||||||||||||||||||| || | ||||||| || ||||  |||| |||||| |   ||||  |||||||||||||||||    
T  4400566 gatactctcctgatacgtatcgggaagtatcagacaag-tatcggttcatgatacacaggagatacgatttatcattcattttgaagtatctgga 4400473  T

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Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 44121879 - 44121960
Alignment:
Q  27 tatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||  |||||| |||||| || |||||||||||| ||| |||||    
T  44121879 tatcaggaagtatcgggcagg-tatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaagtatgtgggcttca 44121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 31946174 - 31946207
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  31946174 tcggatactctcctgatacgtatcgggaagtatc 31946207  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 51858965 - 51858932
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  51858965 tcggatactctcctgatacgtatcgggaagtatc 51858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 24793679 - 24793714
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24793679 tcggatactctcctgatacgtattgggaagtatcag 24793714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 31946263 - 31946314
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| |||||| ||||| ||||||||| ||||| |||||||    
T  31946263 tatcggtgcaggatacgcagggaatacgatacgtcatccattttaaagtatc 31946314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 47607283 - 47607248
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||| ||||||||||||||||||||||||||    
T  47607283 tcggatactatcctgatacgtatcgggaagtatcag 47607248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 24793743 - 24793804
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatat 64  Q
    |||||||||||||||| |||||||||||||  |||||| || |||| ||||| ||||||||||    
T  24793743 aatcttcggatactcttctgatacgtatcgaaaagtattagacagg-tatcgatgcaggatat 24793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 1177147 - 1177114
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  1177147 tcggatactttcctgatacgtatcgggaagtatc 1177114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40694238 - 40694205
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||| |||||||||||||||||||||    
T  40694238 ggatactctcctcatacgtatcgggaagtatcag 40694205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Complemental strand, 49470448 - 49470419
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtat 39  Q
    ||||||||||||||||||||||||||||||    
T  49470448 gatactctcctgatacgtatcgggaagtat 49470419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 726504 - 726536
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||| ||||||||    
T  726504 tcggatactctcctgatacgtatcaggaagtat 726536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 754340 - 754308
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||| ||||||||    
T  754340 tcggatactctcctgatacgtatcaggaagtat 754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 17892416 - 17892384
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatca 41  Q
    ||||||||||||||||||||| |||||||||||    
T  17892416 ggatactctcctgatacgtattgggaagtatca 17892384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 36943836 - 36943804
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||| |||||||||||    
T  36943836 gatactctcctgatacgtatcaggaagtatcag 36943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 52572278 - 52572207
Alignment:
Q  40 caggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagag 112  Q
    |||||||| |||||||||| |||   |||||||||||| |||||||| ||||| ||||||| || ||||||||    
T  52572278 caggcagg-tatcggtgcatgatgcacaggggatacggaacgtcatccattttaaagtatcggggcttcagag 52572207  T

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Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 6134394 - 6134503
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||| |||||||||||| ||||||||| |||||||||||||     
T  6134394 aatcttcggatactctcctgatacatatcgggaagtatcaggtatg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatca 6134492  T
Q  102 ggacttcagag 112  Q
    || ||||||||    
T  6134493 gggcttcagag 6134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 35389849 - 35389750
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  35389849 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 35389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 29915959 - 29915861
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  29915959 gatactatcctgatacgtatcgggaagtatcagacagg-tatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttca 29915861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 29965112 - 29965014
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  29965112 gatactatcctgatacgtatcgggaagtatcagacagg-tatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttca 29965014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 7327811 - 7327706
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  7327811 ggatactatccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 7327713  T
Q  109 agagctt 115  Q
    | |||||    
T  7327712 acagctt 7327706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 22289733 - 22289830
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  22289733 aatcttcggatactctcctgatacgtatcaggaagtatcatgcagg-tattggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 22289830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 1679717 - 1679816
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||| || ||||    
T  1679717 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatatgcagtggatacggtacgttatccattttgaagtatcggggcttc 1679815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 40497429 - 40497330
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  40497429 ggatactctccggatacgtatcgggaagtatcgggcaag-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 40497331  T

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Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 48122924 - 48122822
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||  ||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||    
T  48122924 ggatactctctggatacgtatcgggaaatatcgggcatg-tatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttc 48122826  T
Q  109 agag 112  Q
    ||||    
T  48122825 agag 48122822  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 55269028 - 55269130
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||||||||||||||     ||||| ||||||||| |||||||||||| ||||||||| |||||||||||||     
T  55269028 aatcttcggatactctcctgatacgtatcgggaagtatcagg-----tatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatcg 55269122  T
Q  102 ggacttca 109  Q
    || |||||    
T  55269123 gggcttca 55269130  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 13748459 - 13748565
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| |||| ||||||| ||||||| | |||||||||||||     
T  13748459 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcagaggatacgatacgtcaaccattttgaagtatcg 13748557  T
Q  102 ggacttca 109  Q
    || |||||    
T  13748558 gggcttca 13748565  T

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Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 28968616 - 28968519
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |  ||||| ||||||||||| |||||||||||||    
T  28968616 aatcttcggatactcttctgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgtaaaggatatggtacgtcatccattttgaagtatc 28968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 37996830 - 37996934
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||||||| |||| |||||| | ||||||||||||| |||||||||||||||||||||| ||||| ||||||| || ||||    
T  37996830 ggatactctccggatacgtatcgggaaatatcgggcagg-tctcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatcggggcttc 37996928  T
Q  109 agagct 114  Q
    | ||||    
T  37996929 acagct 37996934  T

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Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 42229776 - 42229684
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  42229776 ttcggatactcttctgatacgtatcaggaagtatcgggcagg-tatcggtgcaggatacgcaggggatataatacgtcatctattttgaagtat 42229684  T

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Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 22310792 - 22310705
Alignment:
Q  21 gatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||||| || |||||    
T  22310792 gatacgtatcgggaagtatcaggcagg-tatcggtgcaggatacacaggggatacggtacgtcatccattgtgaagtatcggggcttca 22310705  T

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Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 42464926 - 42465025
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||||||||||||| |||| |||||| |||||||||| ||||||||||||| || ||||    
T  42464926 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcagaggatacagtacgtcatccattttgaagtatcggggcttc 42465024  T

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Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 28882697 - 28882787
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||| ||||||| ||||  ||||||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  28882697 ggatactctcccgatacgtatcggaaagtatcgggcat-atatcggtgcatgatacgcaggggatacggtacgtcatccattttgaagtatc 28882787  T

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Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 30226526 - 30226420
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||| ||||||||||| | ||||||| |||||| ||||||||||||||| |||| ||||||| || |||||| |||||||||||| |    
T  30226526 aatcttcggatactctcttgatacgtatcagaaagtatcgggcagg-tatcggtgcaggatacgcagaggatacgataagtcatccattttgaagtatat 30226428  T
Q  102 ggacttca 109  Q
    || |||||    
T  30226427 gggcttca 30226420  T

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Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 41742084 - 41742181
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||  ||| ||||||  ||||||||| |||||||||||||    
T  41742084 aatcttcggatactctccagatatgtatcgggaagtatcaggaagg-tatcggtgcaggatacacagaggatacaatacgtcatccattttgaagtatc 41742181  T

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Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 52684303 - 52684210
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| ||||||||||| ||||||| | |||| ||||||||||||||| ||| | |||||| |||||||||||||||||||||||    
T  52684303 ttcggatactctcctaatacgtatcggaaagtatcggacagg-tatcggtgcaggatacgcatgagatacgatacgtcatctattttgaagtatc 52684210  T

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Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 2122813 - 2122704
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgc---aggggatacggtacgtcatctattttgaagta 98  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| |||| ||   |||||||||  ||||||||| |||||||||||    
T  2122813 aatcttcggattctctcctgatacgtatcgggaagtatcaggcaag-tatcggtgcatgatacgcaggaggggatacaatacgtcatccattttgaagta 2122715  T
Q  99 tctggacttca 109  Q
    || || |||||    
T  2122714 tcggggcttca 2122704  T

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Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 30787574 - 30787680
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||||||||| ||||| |||  || | |||| || ||||||| |||||||||||| ||||||||| |||||||||||||     
T  30787574 aatcttcggatactctcctgatacgtatcgagaagtgtcaaacaag-tatcagtacaggatacgcaggggatacgatacgtcatcgattttgaagtatcg 30787672  T
Q  102 ggacttca 109  Q
    || |||||    
T  30787673 gggcttca 30787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 38889092 - 38889197
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||| |||||||||||||||||||||| || ||||||||| ||||||||||||||||  | || ||||||| ||||||||| |||||||||||||     
T  38889092 aatcttcgaatactctcctgatacgtatcggaaattatcaggca-gatatcggtgcaggat-cgtagaggatacgatacgtcatccattttgaagtatca 38889189  T
Q  102 ggacttca 109  Q
    || |||||    
T  38889190 gggcttca 38889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 983300 - 983203
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| |||||||||||||||||||||||||||||||||| || |||||| |||||  |||  ||||||||||| ||||||||| |||||||| ||||    
T  983300 aatctttggatactctcctgatacgtatcgggaagtatcagaca-gatatcagtgcaaaatacacaggggatacgatacgtcatccattttgaattatc 983203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 3983803 - 3983715
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattt 91  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||  | | |||||| |||||||||| ||||    
T  3983803 aatcttcggatactctcctgatacgtatcgggaagtatcagacaag-tatcggtgcaggatacacggaggatacagtacgtcatccattt 3983715  T

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Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 25700866 - 25700794
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatac 75  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||| |||| ||||||    
T  25700866 aatcttcggatactctcctgatacgtattaggaagtatcaggcagg-tatcggtgcaggatacgcagaggatac 25700794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 52121279 - 52121175
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||| | |||| |||  |||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  52121279 ggatactctcccgatacgtatcgagaagtatcggacagg-tattagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 52121181  T
Q  109 agagct 114  Q
    | ||||    
T  52121180 acagct 52121175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 19421522 - 19421465
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcagg 60  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  19421522 aatcttcggatactctcctgatacgtatcgggaagtatcagacagg-tatcggtgcagg 19421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 28704825 - 28704727
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| ||||| ||| || ||||||| |  ||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||    
T  28704825 gatactctccggatacatattggaaagtatcggatagg-tatcagtgcaggatatgcaggggatacggtacgtcatccattttaaagtatcggggcttca 28704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 53192570 - 53192492
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    ||||| |||||| |||||||||||||||  ||||| ||||||||||||||| ||||||||||||| || |||||||||||    
T  53192570 gtatcgggcagg-tatcggtgcaggatactcagggtatacggtacgtcatccattttgaagtatcggggcttcagagctt 53192492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 7899731 - 7899828
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||| ||||| ||||||||||| | | | |||||  | ||||||| |||||||||||||    
T  7899731 aatcttcggatactcttctgatacgtatcgggaaatatcaagca-gatataggtgcaggatacgtaagagatacatttcgtcatccattttgaagtatc 7899828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 19879151 - 19879201
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  19879151 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 19879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 22611420 - 22611492
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||| |||||| ||||||||||||| | |||||||||||||||||||||| ||||||||||||| || |||||    
T  22611420 gtatcgggcagg-tatcggtgcaggaaacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 22611492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 5271575 - 5271476
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||| |||||||||||||||||||||||||||||            ||||||| ||||||| ||| ||||||| ||| ||||||||||||||||||| |    
T  5271575 aatctccggatactctcctgatacgtatcgggaagg-----------tatcggttcaggatacgcaagggatacagtatgtcatctattttgaagtatat 5271487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 21157741 - 21157847
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||| |||||||| | ||||||| |||| | ||||  ||||||||   ||| | ||||| ||||||||| ||||||||||||||    
T  21157741 aatcttcggatactctcctggtacgtatcagaaagtatcgggca-gttatcaatgcaggatgcacagagaatacgatacgtcatccattttgaagtatct 21157839  T
Q  102 ggacttca 109  Q
    || |||||    
T  21157840 gggcttca 21157847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 47642077 - 47642026
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  47642077 tatcggtgcaggatacgcatgggatacggtacgtcatccattttgaagtatc 47642026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 25937084 - 25937173
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||| |||||||||||| ||||||| |||| | ||| |||| |||||| ||||| |||||| ||||||||| ||||| |||||||    
T  25937084 gatactctccagatacgtatcggaaagtatcgggcatg-tattggtgtaggatacgcaggagatacgatacgtcatccattttaaagtatc 25937173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 45347403 - 45347308
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||| | |||||||||||  ||||||| |||||| |||| |||||||||| |||||||||||| || |||| | |||||||||||||    
T  45347403 aatcttcggatactcttcggatacgtatcgaaaagtatcgggcagg-tatcagtgcaggata-gcaggggatacgata-gtcaaccattttgaagtatc 45347308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 10225209 - 10225274
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| || ||||| ||||    
T  10225209 tatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcagggcttcacagct 10225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 19420961 - 19420905
Alignment:
Q  53 ggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||| || |||||    
T  19420961 ggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttca 19420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 52505852 - 52505950
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | ||||||||||||||| |||| ||| || ||||||||||||||| ||| ||||||| |||| ||||| ||||| ||||||| || ||||    
T  52505852 ggatactcttcggatacgtatcgggaaatatcgggccgg-tatcggtgcaggatacgca-gggatacagtacatcatccatttttaagtatcggggcttc 52505949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 13353143 - 13353178
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  13353143 tcggatactctcctgatacgtatcgggaagtatcag 13353178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 47642176 - 47642141
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  47642176 tcggatactctcctgatacgtatcgggaagtatcag 47642141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 20510168 - 20510265
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||| |||| |||||||||| || ||||||||  |||| ||||||| || |||| ||| |||||||| | ||||||| |||||||||||||    
T  20510168 aatcttcagatattctcttgatacgtattggaaagtatcaaacagg-tatcggtacaagatacgcacgggatacgatgcgtcatccattttgaagtatc 20510265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 33240049 - 33239996
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||    
T  33240049 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcgatgcaggata 33239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 25700931 - 25700898
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  25700931 tcggatactctcctgatacgtatcgggaagtatc 25700898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 28548187 - 28548095
Alignment:
Q  4 tcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||| || ||  ||| ||  |||||||| ||||| |||||||||||||||||    
T  28548187 tcttcggatactctcctgatacgtatagagaagtatcatgca-gatatcagtacaaaatacgc--gggatacgatacgt-atctattttgaagtatc 28548095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 2567445 - 2567505
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||  ||||| ||||||||| ||||||||||||| ||| ||||    
T  2567445 tatcggtgcaggatacgcaggaaatacgatacgtcatccattttgaagtatcgggatttca 2567505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 45057253 - 45057304
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    |||||||| ||||||||||||||||||||| |||| | |||||||||||||||    
T  45057253 atactctcatgatacgtatcgggaagtatcgggcaag-tatcggtgcaggata 45057304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 39664126 - 39664091
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39664126 tcggatactttcctgatacgtatcgggaagtatcag 39664091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 41742020 - 41742051
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagta 38  Q
    ||||||||||||||||||||||||||||||||    
T  41742020 tcggatactctcctgatacgtatcgggaagta 41742051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 48333186 - 48333147
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatca 41  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  48333186 aatcttcggatactttcctgatacgtatcaggaagtatca 48333147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 1528574 - 1528497
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||| |||||| ||||| |||| |||| |||||||||| | ||||||||| ||||||||||||| |  ||||||||||    
T  1528574 gtatcgggcagg-tatcgatgcatgatacgcaggggatatgatacgtcatccattttgaagtatcggagcttcagagct 1528497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 38889034 - 38889068
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatca 41  Q
    |||||||||||||||||||| ||||||||||||||    
T  38889034 tcggatactctcctgatacgcatcgggaagtatca 38889068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 39664064 - 39663999
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcag 68  Q
    |||||||| ||||| | |||||||||||||| ||||||| | |||| ||||||||||||||| ||||    
T  39664064 aatcttcgaatactattctgatacgtatcggaaagtatcggacagg-tatcggtgcaggatacgcag 39663999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 47642112 - 47642074
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  47642112 aatcttcggatactcttctgatacgtattgggaagtatc 47642074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 49419295 - 49419245
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||| ||||||||| ||| |||||||| ||||||||| ||||||||||||    
T  49419295 tatcgatgcaggatacgcaagggatacgatacgtcatccattttgaagtat 49419245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 45532999 - 45533051
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggat 62  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||| ||||||||    
T  45532999 ggatactcttcggatacgtatcgggaagtatcgggcagg-tatcgatgcaggat 45533051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 47750948 - 47750997
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    ||||||||||||||| |||| |||||  |||||||||| |||||||||||    
T  47750948 tatcggtgcaggatacgcagaggatatagtacgtcatccattttgaagta 47750997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 28968675 - 28968647
Alignment:
Q  12 tactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||||    
T  28968675 tactctcctgatacgtatcgggaagtatc 28968647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 30787509 - 30787541
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  30787509 tcggatactctcctgatatgtatcgggaagtat 30787541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 48334129 - 48334089
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||| || ||||||||||| |||||||||||    
T  48334129 aatcttcggatactttcttgatacgtatcaggaagtatcag 48334089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 11829785 - 11829686
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  11829785 ggatactctccggatacgtattgggaagtatcaggcag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 11829687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 27354017 - 27353913
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||||| || ||||    
T  27354017 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcagggaatacggtacgtcatccattttgaagtatcggggcttc 27353919  T
Q  109 agagct 114  Q
    | ||||    
T  27353918 acagct 27353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 25969493 - 25969394
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  25969493 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 25969395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 34122636 - 34122727
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  34122636 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcagaggatacggtacgtcatccattttgaagtatct 34122727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 40095745 - 40095642
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  40095745 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 40095647  T
Q  110 gagct 114  Q
     ||||    
T  40095646 cagct 40095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 48163504 - 48163405
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||| || ||||    
T  48163504 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcacccattttgaagtatcggggcttc 48163406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 1043090 - 1043192
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  1043090 ggatactctcccgatacgtatcggaaagtatcaggcagg-tatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttc 1043188  T
Q  109 agag 112  Q
    ||||    
T  1043189 agag 1043192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 35159968 - 35159871
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||||||| || || | ||||||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  35159968 aatcttcggatactctcctgatacgtatcgggaagtattagacaag-tatcggtgcagaatatgcaggggatacgatacatcatccattttgaagtatc 35159871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 9250441 - 9250529
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagta 98  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  9250441 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 11058447 - 11058349
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||  ||||||||| | ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||    
T  11058447 gatactctcccaatacgtatctgaaagtatcagacag-atatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtacctggacttca 11058349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 152 - 283
Target Start/End: Complemental strand, 3686634 - 3686500
Alignment:
Q  152 aggaggtggcccgaacaagtttaaatattaaggatcattcgacataagtgaaatccggacgtgccctattttgcgcttggatgaaggtcagatttctcca 251  Q
    |||||||||||  |||||||||||||| | | |||||| ||||||| ||||||||||||| |||||||||||||  |||||||||||||  |||||||||    
T  3686634 aggaggtggccaaaacaagtttaaatactcatgatcatccgacata-gtgaaatccggacatgccctattttgcatttggatgaaggtcgtatttctcca 3686536  T
Q  252 a----ggaagtggaatttgaatgaattggatgaagg 283  Q
    |     ||||||||||||||| ||||||||||||||    
T  3686535 aacagcgaagtggaatttgaaggaattggatgaagg 3686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21409494 - 21409398
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||| |||||| ||||||||| ||||| ||||||    
T  21409494 aatctttggatactctcctgatacgtatcgggatgtatcaggcagg-tatcagtgcaggatatacaggagatacgatacgtcatccatttttaagtat 21409398  T

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Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 23079057 - 23079149
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||| | ||||||| ||||||||||||||| |||||| |||||||||||||    
T  23079057 tcggatactctcctgatacgtatcgggaagtatcgggtagg-tatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatc 23079149  T

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Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 24956354 - 24956254
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| | ||||  |||| |||||| |||||||||| ||||||||| ||||||||||||||    
T  24956354 aatcttcggatactctcttgatacgtatcggaaagtatcaggcatg-tatcaatgcatgatatgtaggggatacgatacgtcatcaattttgaagtatct 24956256  T
Q  102 gg 103  Q
    ||    
T  24956255 gg 24956254  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 34238254 - 34238155
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    |||||||||||  ||||||||||| ||||||| |||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| || ||||    
T  34238254 ggatactctccgaatacgtatcggaaagtatcgggcagg-tatcggtgcagaatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 34238156  T

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Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 23311825 - 23311736
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctatttt 92  Q
    |||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||  || |||||||||||| |||||||||||    
T  23311825 aatcttcggatactctcctgatacatatcgggaagtatcagaca-tatatcggtgcaggatacacatgggatacggtacatcatctatttt 23311736  T

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Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 44960147 - 44960244
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||| ||||||||| ||||||| |||||||||||||||| |||| | || |||||||||| |||||||||||| ||||||||| |||||||||||||    
T  44960147 aatctttggatactcttctgatacatatcgggaagtatcagacagg-tgtcagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 44960244  T

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Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 26773731 - 26773830
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||| ||| |||||||| ||||||||| ||||| ||||||| || ||||    
T  26773731 ggatactctcccgatacgtatcgagaagtatcgggcag-atatcggtgcaggatacgcaagggatacgatacgtcatcaattttaaagtatcggggcttc 26773829  T

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Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 27555388 - 27555487
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| | |||| ||||||||||| ||| |||| | ||||||||||||||| ||||||||||||| || ||||    
T  27555388 ggatactctccggatacgtatcgggaagtatcggacagg-tatcggtgcagaatacgcagagaatacggtacgtcatccattttgaagtatcagggcttc 27555486  T

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Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 38263095 - 38262996
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||| ||||||||| |||| | ||||||||||||||| ||||||||||||| || ||||    
T  38263095 ggatactctccggatacgtatcggaaagtatcgggcagg-tatcgatgcaggatacgcagagaatacggtacgtcatccattttgaagtatcggggcttc 38262997  T

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Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 16564416 - 16564483
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagcttt 116  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  16564416 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttcagagcttt 16564483  T

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Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 16601246 - 16601179
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagcttt 116  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  16601246 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttcagagcttt 16601179  T

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Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 33454173 - 33454067
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||| ||||||||||||||| |||||||| | ||  ||||| |||||||||| |||||||||||| ||||||||| |||||||| ||||     
T  33454173 aatcttcggatactttcctgatacgtatcgagaagtatctgacat-atatcagtgcaggatacgcaggggatacgatacgtcatccattttgaaatatcg 33454075  T
Q  102 ggacttca 109  Q
    || |||||    
T  33454074 gggcttca 33454067  T

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Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 1363028 - 1363133
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggac 105  Q
    |||||||||||||||||||||||||| ||||||||| ||| | |||| ||||| ||||  |||||||||  || | ||||| ||||||||||||||||||    
T  1363028 ttcggatactctcctgatacgtatcgagaagtatcaagcatg-tatcagtgcaagatacacaggggataatgttcatcatccattttgaagtatctggac 1363126  T
Q  106 ttcagag 112  Q
    |||||||    
T  1363127 ttcagag 1363133  T

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Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 18113951 - 18114055
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||   || ||||| ||||||||||| |||||||| |||||    
T  18113951 aatcttcagatactctcctgatacatatcaggaagtatcaggca-gatatcggtgcaggatacatagaggatatggtacgtcatccattttgaa-tatct 18114048  T
Q  102 ggacttc 108  Q
    || ||||    
T  18114049 gggcttc 18114055  T

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Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 4291596 - 4291509
Alignment:
Q  21 gatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||| || |||||    
T  4291596 gatacgtatcgggaagtatcggacagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttaaagtatcggggcttca 4291509  T

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Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 26845915 - 26846005
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||  ||||||||||||||||||  |||||| ||||||||||||||| ||| | |||||||||| ||||| |||||||||||||    
T  26845915 ggatactctccaaatacgtatcgggaagtattgggcagg-tatcggtgcaggatacgcatgagatacggtacatcatccattttgaagtatc 26846005  T

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Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 39520857 - 39520797
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  39520857 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 39520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 42897059 - 42896999
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  42897059 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 42896999  T

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Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 38064698 - 38064592
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||| |||| ||||| |||| ||| | |||||| || |||||| ||||| |||||||     
T  38064698 aatcttcggatactctcctgatacgtatcggaaagtatcggtcagg-tatcagtgcatgatacgcatgagatacgttatgtcatccattttaaagtatcg 38064600  T
Q  102 ggacttca 109  Q
    || |||||    
T  38064599 gggcttca 38064592  T

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Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 27398066 - 27398171
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| ||||| ||| || |||||||  ||||| |||| |||||||||| ||||||||||| |||||||||| ||||| ||||||| || ||||    
T  27398066 ggatactctccggatacatattggaaagtatcgagcagg-tatcagtgcaggatacgcaggggatacagtacgtcatccattttaaagtatccgggcttc 27398164  T
Q  109 agagctt 115  Q
    | |||||    
T  27398165 atagctt 27398171  T

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Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 36202837 - 36202887
Alignment:
Q  50 atcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  36202837 atcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 36202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 40041482 - 40041385
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||||||||||||||||||||||||  |||||||||| || | |||| || ||||||| | ||| |||||| ||| |||||||||||||| ||||    
T  40041482 aatcttcggatactctcctgatacgtatcaagaagtatcagacatg-tatcagtacaggatacgtaggagatacgatacatcatctattttgaaatatc 40041385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 44269828 - 44269732
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| |||||||| |||||||||||||  ||||||||| ||| |||| | ||||||||||||| ||||||| |||||||||| || ||||||||||    
T  44269828 aatcttcagatactctactgatacgtatcgaaaagtatcagacag-atatag-tgcaggatatgcacgggataccgtacgtcatccatcttgaagtatc 44269732  T

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Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 16850882 - 16850783
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||| ||||||| |||| | |||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| || ||||    
T  16850882 ggatactcttcagatacgtatcggaaagtatcgggcaag-tatcggtgcatgatacacagggaatacggtacgtcatccattttgaaatatcggggcttc 16850784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23970138 - 23970247
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||| || ||||||||| ||||||||||| || ||||||| |||| |||| ||||||||||   ||||||||| ||| |||| |||      
T  23970138 aatcttcagatactcttctaatacgtatcaggaagtatcagaca-gatatcgatgcatgatacgcaggggatataatacgtcatccattatgaaatattg 23970236  T
Q  102 ggacttcagag 112  Q
    |||||||||||    
T  23970237 ggacttcagag 23970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 8056346 - 8056438
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||| ||||||||||||||||||||||| ||||| ||     || |||||| || |||| |||  ||||||||||||||||| ||||||||||||    
T  8056346 aatcttcagatactctcctgatacgtatcggaaagtacca-----gacatcggtacaagatacgcaaaggatacggtacgtcatccattttgaagtat 8056438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 1400216 - 1400251
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  1400216 tcggatactctcctgatacgtatcgggaagtatcag 1400251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 19510619 - 19510529
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    |||||||| || ||||| |||| ||||||||| |||| | |||| ||||| ||||  ||||||||||| ||||||||| |||||||||||||    
T  19510619 ggatactcacccgatacatatcaggaagtatcgggcatg-tatcagtgcatgatacacaggggatacgatacgtcatccattttgaagtatc 19510529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 554926 - 554998
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||| ||| |||||||||||||||  ||||||||||| |||||||||||||||  |||||| || |||||    
T  554926 gtatcaggaagg-tatcggtgcaggatacacaggggatacgatacgtcatctattttagagtatcggggcttca 554998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 36757964 - 36757996
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||||||||||||    
T  36757964 tcggatactctcctgatacgtatcgggaagtat 36757996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 36767488 - 36767520
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtat 39  Q
    |||||||||||||||||||||||||||||||||    
T  36767488 tcggatactctcctgatacgtatcgggaagtat 36767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 8028793 - 8028740
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggata 63  Q
    ||||||||||| |||||||||| ||||||||| ||| || |||||||||||||||    
T  8028793 ggatactctcccgatacgtatcaggaagtatcgggccgg-tatcggtgcaggata 8028740  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 19820876 - 19820914
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  19820876 aatcttcggatactctcctgatacatatcggaaagtatc 19820914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 21180000 - 21179970
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||||||||    
T  21180000 gatactctcctgatacgtatcgggaagtatc 21179970  T

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Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 554838 - 554871
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  554838 tcggatactctcctgatacttatcgggaagtatc 554871  T

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Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 15878372 - 15878405
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||| |||||||    
T  15878372 tcggatactctcctgatacgtatcggaaagtatc 15878405  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 23970074 - 23970107
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    |||||||||||||||||||||||||| |||||||    
T  23970074 tcggatactctcctgatacgtatcggaaagtatc 23970107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 40041545 - 40041512
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||||||||||||||||||||||| ||||    
T  40041545 tcggatactctcctgatacgtatcgggaaatatc 40041512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 2908256 - 2908343
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaa 95  Q
    |||| |||||||| |||||||||||||  |||||||||| ||||||| |||| |||||| |   ||||| ||| |||||| ||||||||    
T  2908256 tcgggtactctccagatacgtatcggggtgtatcaggca-gatatcgctgcatgatatgtatctgatacagtatgtcatcaattttgaa 2908343  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 7416717 - 7416689
Alignment:
Q  2 aatcttcggatactctcctgatacgtatc 30  Q
    |||||||||||||||||||||||||||||    
T  7416717 aatcttcggatactctcctgatacgtatc 7416689  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 26973156 - 26973116
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||||||||||||||| |||||||||||||  |||||||||    
T  26973156 aatcttcggatactcttctgatacgtatcgaaaagtatcag 26973116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 38064768 - 38064729
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  38064768 aatcttcggatactctcttgatacgtatc-ggaagtatcag 38064729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 47238665 - 47238725
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||  ||| |||||||||||| ||| ||||| ||||||||||||| || |||||    
T  47238665 tatcggtgcaatatacgcaggggatacgatacatcatccattttgaagtatcggggcttca 47238725  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 47720188 - 47720220
Alignment:
Q  6 ttcggatactctcctgatacgtatcgggaagta 38  Q
    |||||||||||||| ||||||||||||||||||    
T  47720188 ttcggatactctccggatacgtatcgggaagta 47720220  T

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Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 234412 - 234300
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||| ||||| |||||| ||||||| | |||||||||||||     
T  234412 aatcttcggatactcttctgatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggagatacgatacgtcaaccattttgaagtatcg 234314  T
Q  102 ggacttcagagctt 115  Q
    || |||||||||||    
T  234313 gggcttcagagctt 234300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 8357057 - 8356958
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||| | |||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  8357057 ggatactcttcggatacgtatcgggaagtatcggacagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcaggacttc 8356959  T

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Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 1036846 - 1036944
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||    
T  1036846 gatactctccggatacgtatcggaaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 1036944  T

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Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 31195888 - 31195977
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  31195888 ggatactctccagatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 7188798 - 7188900
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||   |||| ||||||||||||| || ||||    
T  7188798 ggatactctccggatacgtatcaggaagtatcaggcagg-tatcggtgcaggatacgcaggggatacggta---catccattttgaagtatcggggcttc 7188893  T
Q  109 agagctt 115  Q
    |||||||    
T  7188894 agagctt 7188900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 3299238 - 3299141
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||| |||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||    
T  3299238 atactctccagatacgtatcggaaaatatcatgcagg-tatcggtgcaggatatgcagaggatacggtacatcatctattttgaagtatcagggcttca 3299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 13607797 - 13607894
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||||||||||||||||| | || ||| ||||||| |||| ||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  13607797 aatcttcggatactctcctgatacgtatcagaaattattaggcagg-tatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 26327260 - 26327155
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||  |||| |||||| ||||||||| |||||||||||||     
T  26327260 aatcttcggatactctctt-atacgtatcgggaagtatcgggcagg-tatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatcg 26327163  T
Q  102 ggacttca 109  Q
    || |||||    
T  26327162 gggcttca 26327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 27084091 - 27083985
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||| |||||||||||| |||||||| |||||||||   ||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||     
T  27084091 aatctttggatactctccttatacgtattgggaagtattgagcagg-tatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcg 27083993  T
Q  102 ggacttca 109  Q
    || |||||    
T  27083992 gggcttca 27083985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 3212576 - 3212477
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||  || || ||||| ||||||||| ||||||||||||| || ||||    
T  3212576 ggatactctccggatacgtatcgggaagtatcgggcag-atatcggtgcaggatacacaaggaatacgatacgtcatccattttgaagtatcggggcttc 3212478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 32018074 - 32017986
Alignment:
Q  11 atactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| | ||||||||| || ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  32018074 atactctacggatacgtataggaaagtatcgggcag-atatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32130678 - 32130777
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||||||||||||||||||| ||||   |||| |||| |||||||||| |||||||||||||||||||||  ||||| ||||||| || ||||    
T  32130678 ggatactctcctgatacgtatcgggaaatatcgaacagg-tatcagtgcaggatacgcaggggatacggtacgtcattcattttaaagtatcggggcttc 32130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19128259 - 19128163
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtat 99  Q
    |||||||||||||||| |||||||||||||| ||||||| ||| || ||| |||||||||||  ||||||||||| ||||||| | ||||| ||||||    
T  19128259 aatcttcggatactcttctgatacgtatcggaaagtatcgggc-gggtattggtgcaggatacacaggggatacgatacgtcaaccattttaaagtat 19128163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 6708053 - 6708159
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||| |||||||||| ||||  ||||||||||  || |||||| ||||| |||||||     
T  6708053 aatcttcggatactctcctgatacatattggaaagtatcaggaagg-tatcggtgcatgatacacaggggatacaatatgtcatccattttaaagtatcg 6708151  T
Q  102 ggacttca 109  Q
    || |||||    
T  6708152 gggcttca 6708159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 25834515 - 25834605
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| ||||||||||||||| ||| ||||||||| | |||| |||||||||| ||| |||||||| ||||||||| | |||||||||||    
T  25834515 ggatactgtcctgatacgtatcgagaaatatcaggcatg-tatcagtgcaggatacgcacgggatacgatacgtcatccaatttgaagtatc 25834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 13061325 - 13061414
Alignment:
Q  10 gatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||| ||||||||| |||| | ||| ||||||||||  |||||||||||||    
T  13061325 gatactctcctaatacgtatcagaaagtatcaggcag-atatcgatgcaggatacgcagagaatatggtacgtcattcattttgaagtatc 13061414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 10894619 - 10894690
Alignment:
Q  36 gtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||||| |||||||||| |||| || ||||||||||||||||||| ||||||||||||| || |||||    
T  10894619 gtatcaggcagg-tatcggtgcatgatacgc-ggggatacggtacgtcatccattttgaagtatcagggcttca 10894690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 31079777 - 31079737
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcag 42  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  31079777 aatcatcggatactctcctgatacgtatcgggaagtatcag 31079737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 7255091 - 7255056
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatcag 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  7255091 tcggatactctcctgatacgtatcgggaagtatcag 7255056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 29893028 - 29892966
Alignment:
Q  47 gatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||| ||||||||| ||||||||||| |||| ||||| ||||| |||||||||| |||||    
T  29893028 gatatcgatgcaggatacgcaggggatacagtacatcatccattttaaagtatctgggcttca 29892966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 31079672 - 31079621
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||| |||||||    
T  31079672 tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatc 31079621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 10894533 - 10894563
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgg 32  Q
    |||||||||||||||||||||||||||||||    
T  10894533 aatcttcggatactctcctgatacgtatcgg 10894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 31741232 - 31741278
Alignment:
Q  67 aggggatacggtacgtcatctattttgaagtatctggacttcagagc 113  Q
    |||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  31741232 aggggatacgatacgtcatccattttgaagtatcggaacttcagagc 31741278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 19128323 - 19128290
Alignment:
Q  7 tcggatactctcctgatacgtatcgggaagtatc 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  19128323 tcggatactttcctgatacgtatcgggaagtatc 19128290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 8111 - 8210
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| || ||||    
T  8111 ggatactctccggatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttc 8209  T

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Target: scaffold0250 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5611 - 5521
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  5611 ggatactctcccgatacgtatcgggaagtatcgggcagg-tatcggtgcaggatacgcaggggatacggtacgtcgtccattttgaagtatc 5521  T

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Target: scaffold0285 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 13356 - 13259
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatc 100  Q
    ||||||| ||||||||| ||||||||||||||||||||| | |||| ||||||||||||||| ||||| |||||| ||||||||| |||||||||||||    
T  13356 aatcttcagatactctcttgatacgtatcgggaagtatctgacagg-tatcggtgcaggatacgcaggagatacgatacgtcatccattttgaagtatc 13259  T

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Target: scaffold0240 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 10706 - 10600
Alignment:
Q  2 aatcttcggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatct 101  Q
    ||||||| |||||||||||||||||||||| |||||||| |||| | |||||||||| |||| |||||||||| ||||| ||||| ||||| ||||||||    
T  10706 aatcttctgatactctcctgatacgtatcgagaagtatcgggcaag-tatcggtgcatgatacgcaggggatatggtacatcatccattttaaagtatct 10608  T
Q  102 ggacttca 109  Q
    || |||||    
T  10607 gggcttca 10600  T

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Target: scaffold0037 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 27839 - 27905
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagctt 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| |||||    
T  27839 tatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 27905  T

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Target: scaffold0060 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 30463 - 30562
Alignment:
Q  9 ggatactctcctgatacgtatcgggaagtatcaggcaggatatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttc 108  Q
    ||||||||||| |||||||||| ||||||||| |||||| |||||||| |||||| |||||  ||||||||||| ||| ||||||||||||| || ||||    
T  30463 ggatactctccggatacgtatcaggaagtatcgggcagg-tatcggtgtaggatacgcaggaaatacggtacgttatccattttgaagtatcggggcttc 30561  T

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Target: scaffold0005 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 44648 - 44713
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagct 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||    
T  44648 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 44713  T

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Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 42123 - 42183
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| || |||||    
T  42123 tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttca 42183  T

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Target: scaffold0177 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 25588 - 25655
Alignment:
Q  49 tatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttcagagcttt 116  Q
    ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| || ||||| ||||||    
T  25588 tatcggtgcagaatacgcaggggatacggtgcgtcatccattttgaagtatcggggcttcacagcttt 25655  T

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Target: scaffold0406 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 13921 - 13866
Alignment:
Q  54 gtgcaggatatgcaggggatacggtacgtcatctattttgaagtatctggacttca 109  Q
    |||||||||| ||||  ||||| |||||||||| ||||||||||||| ||||||||    
T  13921 gtgcaggatacgcagatgatacagtacgtcatccattttgaagtatcgggacttca 13866  T

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