View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13998_high_33 (Length: 225)
Name: NF13998_high_33
Description: NF13998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13998_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 25 - 224
Target Start/End: Complemental strand, 3422962 - 3422763
Alignment:
| Q |
25 |
ttagtgtaaatggaaaataaattttaatcaaattattgcaagtagatcataaatgctcaaaagagtacccacatttgcttgagattttgggtgtgatcaa |
124 |
Q |
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| T |
3422962 |
ttagtgtaaatggaaaataaattttaatcaaattattgcaagtagatcataaatgctcaaaagagtacccacatttgcttgagattttgggtgtgatcaa |
3422863 |
T |
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| Q |
125 |
aacctattcaaacaattgtgctgatgtggttaacgagttttcactaatcatttagaaaaatataaatttgatttttggataccataatcaattatattta |
224 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |
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| T |
3422862 |
aacctattcaaacaattgtgttgatgtggttaacgagttttcactaatcatttagaaaaacataaatttgatttttggatatcataatcagctatattta |
3422763 |
T |
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