View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13998_low_2 (Length: 650)

Name: NF13998_low_2
Description: NF13998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13998_low_2
NF13998_low_2
[»] chr7 (55 HSPs)
chr7 (83-526)||(31642956-31643417)
chr7 (72-526)||(47202398-47202864)
chr7 (72-428)||(3304638-3305014)
chr7 (93-526)||(42925422-42925875)
chr7 (150-526)||(8154891-8155276)
chr7 (150-526)||(36468321-36468703)
chr7 (150-523)||(36629197-36629577)
chr7 (206-526)||(9151844-9152168)
chr7 (151-526)||(33573830-33574200)
chr7 (150-522)||(19225384-19225765)
chr7 (150-397)||(28230379-28230635)
chr7 (209-526)||(42864883-42865210)
chr7 (150-429)||(3936100-3936388)
chr7 (150-426)||(36408363-36408648)
chr7 (96-526)||(24041979-24042419)
chr7 (296-524)||(19818527-19818754)
chr7 (304-526)||(43737237-43737459)
chr7 (296-526)||(7115051-7115282)
chr7 (152-502)||(33151200-33151555)
chr7 (150-370)||(37518233-37518462)
chr7 (150-268)||(43737116-43737234)
chr7 (356-526)||(37518045-37518215)
chr7 (296-522)||(24690122-24690346)
chr7 (117-414)||(31985411-31985720)
chr7 (247-425)||(1518797-1518983)
chr7 (337-425)||(26555040-26555128)
chr7 (447-524)||(3304535-3304612)
chr7 (318-429)||(36946171-36946282)
chr7 (447-521)||(43186083-43186157)
chr7 (448-526)||(28230274-28230352)
chr7 (172-289)||(6467711-6467830)
chr7 (458-525)||(16278322-16278389)
chr7 (458-524)||(5731063-5731128)
chr7 (322-428)||(37398771-37398877)
chr7 (296-386)||(5278411-5278501)
chr7 (310-428)||(6467020-6467138)
chr7 (460-525)||(8214377-8214442)
chr7 (323-408)||(39581913-39581998)
chr7 (447-526)||(31985299-31985378)
chr7 (461-526)||(48705781-48705846)
chr7 (458-526)||(32701042-32701110)
chr7 (465-521)||(47239505-47239561)
chr7 (381-428)||(16983613-16983660)
chr7 (476-526)||(26554945-26554995)
chr7 (465-526)||(30861399-30861460)
chr7 (352-425)||(48776092-48776165)
chr7 (474-526)||(6466919-6466971)
chr7 (447-522)||(1519012-1519087)
chr7 (463-526)||(37398669-37398732)
chr7 (469-511)||(2816891-2816933)
chr7 (463-525)||(37402756-37402818)
chr7 (151-192)||(36946417-36946458)
chr7 (150-182)||(9151806-9151838)
chr7 (150-182)||(37218240-37218272)
chr7 (375-427)||(47239570-47239622)
[»] chr8 (49 HSPs)
chr8 (103-526)||(31519676-31520116)
chr8 (150-526)||(8885234-8885620)
chr8 (72-426)||(21004294-21004661)
chr8 (108-526)||(3094621-3095062)
chr8 (150-523)||(28916775-28917149)
chr8 (150-526)||(42280673-42281061)
chr8 (152-511)||(44106217-44106585)
chr8 (150-526)||(27927732-27928108)
chr8 (150-526)||(34853321-34853705)
chr8 (150-427)||(9073496-9073782)
chr8 (296-526)||(11698098-11698328)
chr8 (228-524)||(14163841-14164145)
chr8 (95-329)||(16310526-16310779)
chr8 (296-526)||(36980716-36980946)
chr8 (252-429)||(36165716-36165902)
chr8 (171-329)||(40994805-40994972)
chr8 (252-526)||(17119662-17119943)
chr8 (88-329)||(37248478-37248738)
chr8 (247-428)||(40392626-40392815)
chr8 (296-428)||(40328044-40328176)
chr8 (296-428)||(1076702-1076834)
chr8 (304-422)||(34645532-34645650)
chr8 (309-429)||(6395244-6395364)
chr8 (296-412)||(36317943-36318059)
chr8 (309-513)||(28423581-28423785)
chr8 (247-417)||(4259528-4259704)
chr8 (152-221)||(11698382-11698451)
chr8 (458-525)||(33472286-33472353)
chr8 (448-526)||(10840535-10840613)
chr8 (458-525)||(31234604-31234672)
chr8 (72-157)||(7971167-7971252)
chr8 (352-425)||(8621520-8621593)
chr8 (459-523)||(40994980-40995044)
chr8 (458-522)||(41530891-41530954)
chr8 (458-523)||(7981825-7981890)
chr8 (458-523)||(9845401-9845465)
chr8 (446-507)||(40328195-40328256)
chr8 (448-523)||(36318095-36318170)
chr8 (476-526)||(4259464-4259514)
chr8 (310-427)||(7981675-7981792)
chr8 (458-511)||(24627998-24628050)
chr8 (150-227)||(35676628-35676705)
chr8 (447-526)||(34645678-34645755)
chr8 (150-238)||(36404234-36404321)
chr8 (458-525)||(10833392-10833458)
chr8 (458-525)||(24627789-24627855)
chr8 (484-518)||(32504126-32504160)
chr8 (477-522)||(9073847-9073892)
chr8 (88-141)||(44106143-44106196)
[»] chr4 (73 HSPs)
chr4 (72-526)||(34972786-34973249)
chr4 (72-522)||(32441723-32442191)
chr4 (72-524)||(6003457-6003928)
chr4 (83-526)||(6228595-6229055)
chr4 (150-526)||(19835520-19835905)
chr4 (150-524)||(25491179-25491562)
chr4 (150-526)||(40703664-40704049)
chr4 (87-526)||(49396935-49397396)
chr4 (83-429)||(41412977-41413319)
chr4 (153-523)||(46440057-46440438)
chr4 (152-526)||(17932919-17933302)
chr4 (150-526)||(25752225-25752611)
chr4 (188-525)||(2505814-2506160)
chr4 (159-526)||(48318846-48319223)
chr4 (150-523)||(7931658-7932038)
chr4 (93-526)||(38536103-38536556)
chr4 (88-428)||(55052498-55052858)
chr4 (150-524)||(54631276-54631630)
chr4 (258-526)||(53893808-53894083)
chr4 (150-510)||(8106392-8106763)
chr4 (189-526)||(31582212-31582550)
chr4 (72-295)||(23523818-23524053)
chr4 (93-295)||(29822553-29822765)
chr4 (296-523)||(25538763-25538991)
chr4 (336-523)||(29822775-29822962)
chr4 (310-522)||(27741899-27742112)
chr4 (296-497)||(52089340-52089541)
chr4 (88-227)||(25539038-25539187)
chr4 (296-429)||(41322971-41323104)
chr4 (72-526)||(3703037-3703505)
chr4 (369-524)||(38417020-38417174)
chr4 (446-514)||(52089559-52089627)
chr4 (447-525)||(18050972-18051050)
chr4 (448-522)||(49001341-49001415)
chr4 (312-429)||(47456771-47456888)
chr4 (247-422)||(7863539-7863722)
chr4 (446-526)||(23524092-23524172)
chr4 (352-422)||(49001446-49001516)
chr4 (468-526)||(14473997-14474055)
chr4 (319-425)||(14474095-14474201)
chr4 (463-525)||(37222286-37222348)
chr4 (312-425)||(20078719-20078832)
chr4 (466-526)||(5803210-5803270)
chr4 (252-385)||(27879651-27879792)
chr4 (448-524)||(42497719-42497795)
chr4 (350-429)||(48095746-48095825)
chr4 (335-425)||(55838875-55838965)
chr4 (296-425)||(37222116-37222244)
chr4 (296-397)||(46381079-46381180)
chr4 (295-368)||(47873964-47874037)
chr4 (458-526)||(372238-372306)
chr4 (322-413)||(1788175-1788269)
chr4 (458-526)||(4936504-4936572)
chr4 (295-387)||(372073-372167)
chr4 (72-167)||(42660418-42660513)
chr4 (335-421)||(55774701-55774787)
chr4 (447-520)||(47456911-47456984)
chr4 (465-526)||(48629348-48629409)
chr4 (199-287)||(52077012-52077101)
chr4 (458-526)||(20083287-20083355)
chr4 (472-524)||(32601169-32601221)
chr4 (466-526)||(41322875-41322934)
chr4 (303-375)||(42497809-42497881)
chr4 (466-526)||(48095644-48095704)
chr4 (458-525)||(25140592-25140658)
chr4 (473-520)||(53836072-53836119)
chr4 (446-524)||(1748103-1748181)
chr4 (247-285)||(1788092-1788130)
chr4 (83-141)||(38416488-38416546)
chr4 (361-417)||(4936619-4936675)
chr4 (458-490)||(25140833-25140865)
chr4 (469-525)||(47072315-47072371)
chr4 (73-141)||(50392596-50392664)
[»] chr1 (52 HSPs)
chr1 (72-526)||(18583326-18583799)
chr1 (72-526)||(33611192-33611665)
chr1 (81-518)||(49786182-49786637)
chr1 (72-526)||(23442642-23443115)
chr1 (90-526)||(41584447-41584907)
chr1 (150-526)||(42545959-42546344)
chr1 (72-429)||(34162600-34162976)
chr1 (150-522)||(45046636-45047017)
chr1 (101-429)||(49677426-49677763)
chr1 (72-295)||(32542310-32542531)
chr1 (169-526)||(38885239-38885590)
chr1 (150-417)||(15069732-15070009)
chr1 (160-526)||(40907716-40908091)
chr1 (88-429)||(17000299-17000659)
chr1 (151-526)||(7011202-7011588)
chr1 (150-526)||(28866412-28866797)
chr1 (150-427)||(40650556-40650842)
chr1 (150-523)||(44572885-44573263)
chr1 (150-510)||(34006251-34006622)
chr1 (229-524)||(52744627-52744930)
chr1 (152-362)||(32817557-32817776)
chr1 (153-429)||(45567769-45568040)
chr1 (72-238)||(30829544-30829710)
chr1 (83-238)||(24471392-24471548)
chr1 (230-525)||(27794904-27795206)
chr1 (296-522)||(6223539-6223758)
chr1 (304-428)||(25563294-25563418)
chr1 (151-429)||(26723367-26723649)
chr1 (295-425)||(42929030-42929160)
chr1 (296-526)||(24472610-24472839)
chr1 (466-526)||(41584363-41584423)
chr1 (310-425)||(3561218-3561333)
chr1 (458-524)||(800677-800742)
chr1 (458-525)||(9445972-9446038)
chr1 (469-523)||(49677783-49677837)
chr1 (466-519)||(8704307-8704360)
chr1 (458-514)||(43319079-43319134)
chr1 (483-526)||(40650486-40650529)
chr1 (322-425)||(45879992-45880095)
chr1 (372-417)||(890748-890793)
chr1 (72-141)||(27794759-27794828)
chr1 (474-522)||(44037189-44037237)
chr1 (247-281)||(8704553-8704587)
chr1 (449-523)||(38131185-38131259)
chr1 (461-523)||(43318859-43318920)
chr1 (72-129)||(38950185-38950242)
chr1 (150-227)||(43319286-43319363)
chr1 (93-157)||(6223908-6223972)
chr1 (461-521)||(26230352-26230412)
chr1 (466-510)||(27400079-27400123)
chr1 (72-112)||(32542839-32542879)
chr1 (72-112)||(44937783-44937823)
[»] chr3 (68 HSPs)
chr3 (72-526)||(2358404-2358879)
chr3 (72-429)||(52777145-52777511)
chr3 (83-526)||(47301934-47302396)
chr3 (83-515)||(43472761-43473193)
chr3 (96-524)||(50716180-50716628)
chr3 (96-524)||(50796219-50796667)
chr3 (93-522)||(3902592-3903040)
chr3 (153-526)||(34821125-34821507)
chr3 (88-522)||(28872923-28873379)
chr3 (154-526)||(35142070-35142450)
chr3 (150-526)||(46622577-46622952)
chr3 (153-522)||(3351852-3352230)
chr3 (152-519)||(38977537-38977913)
chr3 (152-526)||(47739716-47740097)
chr3 (150-526)||(39149802-39150179)
chr3 (150-526)||(51258394-51258781)
chr3 (90-417)||(501032-501378)
chr3 (151-526)||(51540409-51540780)
chr3 (335-526)||(3938368-3938559)
chr3 (152-428)||(30721690-30721974)
chr3 (296-526)||(35345691-35345921)
chr3 (72-329)||(3937292-3937559)
chr3 (150-429)||(49096105-49096394)
chr3 (296-425)||(47123173-47123302)
chr3 (309-425)||(47130552-47130668)
chr3 (153-359)||(33438517-33438731)
chr3 (296-425)||(5127782-5127911)
chr3 (296-425)||(46624867-46624996)
chr3 (310-416)||(29048503-29048610)
chr3 (447-525)||(4394277-4394355)
chr3 (322-428)||(40062552-40062658)
chr3 (310-429)||(51492960-51493080)
chr3 (447-526)||(29048628-29048707)
chr3 (351-425)||(33439383-33439457)
chr3 (72-227)||(48303895-48304060)
chr3 (460-524)||(500970-501034)
chr3 (74-157)||(42936575-42936658)
chr3 (449-507)||(45711886-45711944)
chr3 (296-429)||(54229776-54229909)
chr3 (310-425)||(14828801-14828917)
chr3 (456-526)||(33439494-33439564)
chr3 (312-429)||(4300159-4300276)
chr3 (447-524)||(41300908-41300985)
chr3 (465-522)||(45244822-45244878)
chr3 (322-429)||(50384354-50384462)
chr3 (458-525)||(45244606-45244672)
chr3 (72-158)||(42937114-42937200)
chr3 (466-524)||(43471466-43471524)
chr3 (312-421)||(43472155-43472265)
chr3 (466-514)||(34009888-34009936)
chr3 (74-141)||(8735078-8735144)
chr3 (74-141)||(9087319-9087385)
chr3 (82-141)||(30721996-30722055)
chr3 (322-429)||(51816387-51816494)
chr3 (466-524)||(14828700-14828758)
chr3 (458-520)||(32025194-32025254)
chr3 (150-204)||(34821509-34821563)
chr3 (476-521)||(26465079-26465124)
chr3 (296-417)||(34009980-34010101)
chr3 (459-519)||(4300066-4300125)
chr3 (466-526)||(49095999-49096059)
chr3 (94-141)||(33700683-33700730)
chr3 (247-289)||(40062469-40062511)
chr3 (228-289)||(27143443-27143504)
chr3 (473-526)||(29036128-29036181)
chr3 (473-526)||(43419911-43419964)
chr3 (94-143)||(51258329-51258378)
chr3 (466-522)||(51816531-51816587)
[»] chr5 (67 HSPs)
chr5 (93-524)||(15799112-15799562)
chr5 (93-526)||(6156618-6157070)
chr5 (153-523)||(38692567-38692946)
chr5 (150-524)||(39524730-39525113)
chr5 (88-526)||(33487492-33487950)
chr5 (74-524)||(12464902-12465356)
chr5 (150-523)||(20891567-20891948)
chr5 (159-524)||(31221123-31221497)
chr5 (88-429)||(4064598-4064959)
chr5 (72-524)||(15957617-15958086)
chr5 (152-526)||(37183563-37183947)
chr5 (150-521)||(38871625-38872005)
chr5 (151-514)||(38372264-38372628)
chr5 (206-526)||(31928907-31929235)
chr5 (150-526)||(28083158-28083545)
chr5 (150-526)||(40619767-40620157)
chr5 (83-343)||(26190263-26190542)
chr5 (235-526)||(7884233-7884533)
chr5 (150-526)||(32841753-32842139)
chr5 (296-526)||(14111976-14112204)
chr5 (169-428)||(24203564-24203832)
chr5 (167-428)||(29862583-29862854)
chr5 (321-523)||(26898588-26898790)
chr5 (365-526)||(26190104-26190265)
chr5 (150-329)||(25746980-25747167)
chr5 (319-525)||(27212836-27213041)
chr5 (83-238)||(34440621-34440776)
chr5 (72-238)||(26318984-26319160)
chr5 (309-429)||(23269459-23269579)
chr5 (309-429)||(12847565-12847685)
chr5 (152-429)||(26095047-26095334)
chr5 (72-157)||(37095084-37095168)
chr5 (459-526)||(26093731-26093798)
chr5 (304-422)||(13908665-13908783)
chr5 (458-523)||(8739067-8739132)
chr5 (458-526)||(21070636-21070704)
chr5 (458-525)||(16429250-16429317)
chr5 (343-425)||(6800810-6800892)
chr5 (446-490)||(24203501-24203545)
chr5 (447-526)||(11185969-11186048)
chr5 (458-520)||(5456327-5456389)
chr5 (149-238)||(14111850-14111940)
chr5 (322-428)||(33901094-33901200)
chr5 (458-524)||(43387944-43388009)
chr5 (343-427)||(26622268-26622350)
chr5 (458-523)||(28445284-28445348)
chr5 (449-510)||(31561706-31561767)
chr5 (310-427)||(40613556-40613673)
chr5 (351-415)||(26093620-26093684)
chr5 (297-425)||(27158194-27158322)
chr5 (318-425)||(41639373-41639483)
chr5 (72-212)||(27212574-27212724)
chr5 (86-143)||(36359769-36359827)
chr5 (83-141)||(38640597-38640655)
chr5 (463-500)||(16504552-16504589)
chr5 (72-140)||(1350451-1350519)
chr5 (474-526)||(27158371-27158423)
chr5 (150-238)||(38640676-38640764)
chr5 (458-525)||(38640904-38640970)
chr5 (447-526)||(41253566-41253645)
chr5 (466-524)||(33331420-33331478)
chr5 (150-238)||(8032225-8032314)
chr5 (247-288)||(14001737-14001778)
chr5 (481-526)||(18515100-18515145)
chr5 (475-524)||(19027337-19027386)
chr5 (483-523)||(6800725-6800765)
chr5 (458-510)||(38641112-38641163)
[»] chr2 (58 HSPs)
chr2 (101-526)||(41854680-41855110)
chr2 (150-526)||(42894369-42894754)
chr2 (72-397)||(36948851-36949195)
chr2 (159-525)||(41510207-41510581)
chr2 (151-429)||(32187743-32188030)
chr2 (151-526)||(33452219-33452604)
chr2 (150-526)||(25217551-25217952)
chr2 (150-428)||(39447154-39447441)
chr2 (150-526)||(44465517-44465890)
chr2 (88-526)||(15994896-15995348)
chr2 (149-429)||(36874976-36875265)
chr2 (153-386)||(45153708-45153950)
chr2 (153-523)||(5507411-5507794)
chr2 (72-524)||(34517005-34517478)
chr2 (296-525)||(38308610-38308840)
chr2 (150-429)||(41203060-41203348)
chr2 (150-395)||(17474707-17474961)
chr2 (446-526)||(17474575-17474655)
chr2 (296-426)||(19109892-19110022)
chr2 (376-526)||(27670723-27670873)
chr2 (109-227)||(33366879-33366996)
chr2 (304-429)||(16750303-16750427)
chr2 (304-425)||(35251085-35251206)
chr2 (337-526)||(38065354-38065543)
chr2 (117-297)||(38066687-38066868)
chr2 (247-407)||(8388741-8388909)
chr2 (304-526)||(30763804-30764027)
chr2 (322-425)||(45293813-45293916)
chr2 (150-250)||(4268299-4268400)
chr2 (312-429)||(42478906-42479023)
chr2 (322-429)||(26228239-26228346)
chr2 (296-422)||(37773696-37773823)
chr2 (473-526)||(32187661-32187714)
chr2 (466-524)||(39447474-39447532)
chr2 (345-425)||(13704690-13704770)
chr2 (458-526)||(17133034-17133102)
chr2 (473-526)||(16750221-16750274)
chr2 (469-522)||(33440291-33440344)
chr2 (458-525)||(9847084-9847150)
chr2 (461-524)||(11457264-11457327)
chr2 (247-425)||(33833845-33834027)
chr2 (472-522)||(24477052-24477102)
chr2 (458-524)||(25715770-25715835)
chr2 (299-425)||(32069116-32069242)
chr2 (456-526)||(41202966-41203036)
chr2 (458-520)||(45293938-45294000)
chr2 (72-141)||(9847606-9847675)
chr2 (72-141)||(25715267-25715336)
chr2 (458-514)||(9847303-9847358)
chr2 (487-526)||(8388980-8389019)
chr2 (448-526)||(35251231-35251309)
chr2 (484-526)||(36948810-36948852)
chr2 (295-408)||(27900509-27900622)
chr2 (496-524)||(3958657-3958685)
chr2 (447-511)||(32069031-32069095)
chr2 (309-429)||(33440384-33440503)
chr2 (393-425)||(34817345-34817377)
chr2 (474-526)||(42604803-42604855)
[»] chr6 (44 HSPs)
chr6 (93-526)||(2813004-2813460)
chr6 (72-520)||(5638783-5639232)
chr6 (150-526)||(4508084-4508469)
chr6 (153-526)||(3717064-3717447)
chr6 (150-522)||(17264402-17264782)
chr6 (88-429)||(5699478-5699846)
chr6 (93-429)||(23406721-23407077)
chr6 (150-520)||(14587349-14587727)
chr6 (203-523)||(2539496-2539825)
chr6 (72-295)||(32035017-32035246)
chr6 (296-526)||(21514813-21515043)
chr6 (150-426)||(1945412-1945696)
chr6 (153-525)||(24604144-24604526)
chr6 (304-405)||(32044537-32044638)
chr6 (296-426)||(9905261-9905392)
chr6 (72-261)||(33413402-33413601)
chr6 (150-250)||(7412820-7412920)
chr6 (252-427)||(29519374-29519557)
chr6 (309-425)||(13800910-13801026)
chr6 (310-429)||(29289504-29289623)
chr6 (296-427)||(34528587-34528718)
chr6 (447-524)||(237096-237173)
chr6 (247-413)||(7734221-7734395)
chr6 (343-417)||(14037856-14037930)
chr6 (469-524)||(5699918-5699973)
chr6 (474-524)||(9905388-9905438)
chr6 (296-425)||(16450361-16450490)
chr6 (474-525)||(1945365-1945416)
chr6 (386-429)||(33413365-33413408)
chr6 (370-427)||(7412971-7413028)
chr6 (322-425)||(3365838-3365941)
chr6 (312-426)||(6704009-6704122)
chr6 (464-524)||(16450533-16450593)
chr6 (72-112)||(32044847-32044887)
chr6 (447-522)||(4655647-4655722)
chr6 (458-525)||(17501297-17501363)
chr6 (468-526)||(7413086-7413144)
chr6 (168-226)||(21517572-21517630)
chr6 (88-141)||(3717469-3717522)
chr6 (150-227)||(9905110-9905187)
chr6 (459-512)||(13800817-13800870)
chr6 (466-523)||(29630749-29630806)
chr6 (472-520)||(14037753-14037801)
chr6 (101-141)||(14587746-14587786)
[»] scaffold0137 (1 HSPs)
scaffold0137 (93-526)||(9280-9731)
[»] scaffold0508 (1 HSPs)
scaffold0508 (153-526)||(3175-3559)
[»] scaffold0027 (2 HSPs)
scaffold0027 (152-429)||(141843-142128)
scaffold0027 (476-526)||(141776-141826)
[»] scaffold0010 (1 HSPs)
scaffold0010 (304-523)||(140640-140860)
[»] scaffold0182 (3 HSPs)
scaffold0182 (153-227)||(23117-23191)
scaffold0182 (475-526)||(23299-23350)
scaffold0182 (296-348)||(23249-23301)
[»] scaffold0018 (1 HSPs)
scaffold0018 (446-523)||(174146-174223)
[»] scaffold0564 (2 HSPs)
scaffold0564 (469-523)||(4691-4745)
scaffold0564 (357-425)||(4579-4647)
[»] scaffold0016 (2 HSPs)
scaffold0016 (458-523)||(205684-205748)
scaffold0016 (465-525)||(205893-205952)
[»] scaffold0770 (1 HSPs)
scaffold0770 (486-520)||(4122-4156)
[»] scaffold0029 (1 HSPs)
scaffold0029 (486-520)||(102426-102460)
[»] scaffold0006 (1 HSPs)
scaffold0006 (352-425)||(59853-59926)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 83 - 526
Target Start/End: Original strand, 31642956 - 31643417
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaactt 172  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||           ||||  ||||||||    
T  31642956 ttgaggtttccggatttcataatctggaatggtgttttcgtttgttatagggtgaaaaatggagttacggatttttctggatcttgtaatttggaaactt 31643055  T
Q  173 caaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccg 271  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |    
T  31643056 caaaaaatagggtgtgttacatgatgtttccggattacataatccggaaaccccccaaacacccttttttaaggtaaaatagttcggattatataatctg 31643155  T
Q  272 aacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcatt 363  Q
    ||| | ||||||| ||||||||||        ||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  31643156 aactggatcagcataaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgttttgggtcatt 31643255  T
Q  364 gttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcc 463  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |                ||||||||||||||||||    
T  31643256 gttacatgttcttagtcaaaaatcggg-tttcggactacttgatcggattgctctgaaacttccgcaaaaaatcagaaaaaattcaaggaccatgactcc 31643354  T
Q  464 cttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  31643355 cttagaaggaacttcttatgggactccacccctcaaaatccaaaattccattatttagaccca 31643417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 72 - 526
Target Start/End: Original strand, 47202398 - 47202864
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taa 161  Q
    ||||||| || ||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||           |||    
T  47202398 caaaaatgcccttgaggtttccggatttcataatccggaatggtgttttcttttgttatagggtgaaaaatggagttacggatttttccagattttgtaa 47202497  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    |||| |||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  47202498 tccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaatagttcggat 47202597  T
Q  261 tatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgt 352  Q
    |||||||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||    
T  47202598 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatccttttgt 47202697  T
Q  353 tttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaagg 452  Q
    |||||||||       | ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||                |||||||    
T  47202698 tttgggtca-------tcgttcttagtcaaaaatcgggttttcgggctacttgattggattgctcttaaacttccccaaaaaatcagaaaaaattcaagg 47202790  T
Q  453 accatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47202791 accatgactcccatagaagggacttcttaagggactccgcccctcaaaatccaaaattccattgtttagaccca 47202864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 72 - 428
Target Start/End: Complemental strand, 3305014 - 3304638
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taa 161  Q
    |||||||  ||||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||||           |||    
T  3305014 caaaaatgtctttgagatttccggatttcataatttggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaa 3304915  T
Q  162 tccggaaacttcaaaaaa-tagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcaga 259  Q
    ||| |||||||||||||| ||| |||||||||||||| |||||||||||||| ||||  |||||||| |||||||||||  |||||||||||||||| ||    
T  3304914 tccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaaaaaccccccaaacacccttttctaaggtaaaatagttcgga 3304815  T
Q  260 ttatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg 351  Q
    ||||||||||||||| ||||||||||||||||||||        ||||||||||| |||||||||||||||||||||| ||  ||||||||||| |||||    
T  3304814 ttatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatcattttg 3304715  T
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3304714 ttttgggtcattgttacctgttcttagtcaaaaatcgggttctcgggctacttgatcggattgctctgaaacttccc 3304638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 93 - 526
Target Start/End: Complemental strand, 42925875 - 42925422
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||          ||||| ||||||||||||||||||||||||    
T  42925875 cggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatag 42925776  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
     | |  ||||||||||||| |||||||||| |||||||||||||| ||||||| ||| | ||||||||| ||||| ||||||||||| ||||| ||||||    
T  42925775 ggcgcattacatgatgttttcggattacataatccggaaaccccctaaacaccttttttcaaggtaaaacagttcggattatataatacgaactgtatca 42925676  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttggg-tcattgttacttgt 372  Q
    |||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||  ||||| || ||||||||||||||    
T  42925675 gcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttggatcattgttacttgt 42925576  T
Q  373 tcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagg 472  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||                |||||||||||||||||||||||||||    
T  42925575 tcttagtcaaaaattgggttttcgggctacttgatcggattgctccgaaacttacccagaaaatcagaaacaattcaaggaccatgactcccttagaagg 42925476  T
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  42925475 gacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagaccca 42925422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 8154891 - 8155276
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||    
T  8154891 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacacccttttttaaggtaa 8154990  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||||||| ||||||||||||  |||  |||||||||||||||||||        |||||||||||||||||||||||||||||| ||| ||  || |||    
T  8154991 aatagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaatcttcctagctc 8155090  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||                
T  8155091 ttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaattgttctgaaacttcccaaaaaaatcaga 8155190  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         |||||||| |||||||||| || |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8155191 aaaaattcaaggatcatgactcccgtacaaggaacttcttacgggactccgcccctcaaaatccaaaattccattgtttagaccca 8155276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 36468703 - 36468321
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||  |||||||||||||||||| | ||||||||||||||||| | ||||||| |||||||||||||| ||||||||||| | |||||||    
T  36468703 cggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgtttcag-attacataatccggaaaccccctaaacaccctttttcaaggtaa 36468605  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||   |||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||||| ||||||||||| || |||||||    
T  36468604 aacagtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcataactc 36468505  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||               
T  36468504 tcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc--agaaaatca 36468407  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         ||| ||||||| |||||||||  |||||||||||||||||||||| |||||||| || ||||||| ||| |||||||||||    
T  36468406 gaaaattcgaggaccacgactccctttaaagggacttcttacgggactccgcccctcaagattcaaaatttcatcgtttagaccca 36468321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 150 - 523
Target Start/End: Original strand, 36629197 - 36629577
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||| || ||||| ||||||||| | | ||||||||||||||||||||||||| ||| |||||||| | ||||||| ||| |||||||||    
T  36629197 cggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccctctaaacaccattttttaaggtaa 36629296  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||| |||||  |||| |        ||||||   | ||||||||||| ||||||||| ||  ||||||    
T  36629297 aacagttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatgtc--gtcattttagggagaatattaatcttcctaactc 36629394  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||||| ||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||               
T  36629395 tcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccaaaaaatcaga 36629494  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
         ||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  36629495 aaaaattcaaggaccatgactcccgtagaagggacttcttacgggactccatccttcaaaatccaaaattccatcgtttagac 36629577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 206 - 526
Target Start/End: Original strand, 9151844 - 9152168
Alignment:
Q  206 attacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------t 296  Q
    ||||||| |||||||||||||| ||||| ||||| | ||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||        |    
T  9151844 attacataatccggaaaccccctaaacatcctttttcaaggtaaaacagtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgt 9151943  T
Q  297 aacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcg 396  Q
    |||||| |||| ||||||||||||||||||||| ||  ||||||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||| |    
T  9151944 aacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttg 9152043  T
Q  397 ggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccct 496  Q
    | ||||||||||||||||||| ||||||||| |                 |||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  9152044 gactacttgatcggattgctccgaaacttccacagaaaaaaaaaa-----tcaaggaccatgactcccctagaagggacttcttacgggactccgcccct 9152138  T
Q  497 caaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||| |||||||||||    
T  9152139 caaaatccaaaattccatcgtttagaccca 9152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 151 - 526
Target Start/End: Complemental strand, 33574200 - 33573830
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaaa 250  Q
    ||||||| |||||||||||||| ||||||||| ||| |||||||||||||| |||||||||| ||||| |||||||         ||| |||||||||||    
T  33574200 ggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccca--------ttttttaaggtaaaa 33574109  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
    ||||||  ||||||||||| |||| |||| |||||||||| ||||        ||||||||||| | |||||||||||||||||||| ||| ||||||||    
T  33574108 tagttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactctt 33574009  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    |||||||||||||| ||||||||||| |||| ||| |||||||| |||||||||  |||||||||||||||||||||||||||||||                 
T  33574008 atccttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttccccaaaaaatcagaaa 33573909  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
       |||||     ||||||||   |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  33573908 aaattcaa-----atgactcctaaagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagaccca 33573830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 150 - 522
Target Start/End: Complemental strand, 19225765 - 19225384
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaa-cccccaaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| | ||| |||    
T  19225765 cggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaatcccctaaacaccatttttcaagataa 19225666  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || | ||| |||||||||||| |||| |||||||||||||| |||||        ||||||| |||  ||||||| |||  |||| ||| ||  ||||||    
T  19225665 aacaattcggattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactc 19225566  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||||||||||||||||   |||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||               
T  19225565 tcatccttctgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttccccagaaaatcaga 19225466  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
         |||||||| |||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  19225465 aaaaattcaaggaacatgactcccatagaaggaacttcttacaggactccgcccctcaaaatccaaaattccatcgtttaga 19225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 150 - 397
Target Start/End: Complemental strand, 28230635 - 28230379
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | ||||| ||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||    
T  28230635 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaa 28230536  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||| ||||||||||||| ||  ||||||    
T  28230535 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactc 28230436  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgg 397  Q
    | |||||| ||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  28230435 tcatccttctgttttgggtcattgttgcatgttcttagtcaaaattcgggttttcgg 28230379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 209 - 526
Target Start/End: Complemental strand, 42865210 - 42864883
Alignment:
Q  209 acatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaata--------ac 299  Q
    |||| |||||||||||||| |||||||| || | ||||||||| ||| | ||||||||||||||||| |||||||||||||| |||||||        ||    
T  42865210 acataatccggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaac 42865111  T
Q  300 atgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggc 399  Q
    ||| |||| ||||||||||||||||||||| ||  ||||||| |||||| |||||||||||||||| || ||||||| |||||||||| ||||||||| |    
T  42865110 atggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggac 42865011  T
Q  400 tacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttag-aagggacttcttacgggactccacccctca 498  Q
    |||||||||||||||||||||||| |||||                ||||||||||||||||||||||| ||| ||||||||| |||||||| |||||||    
T  42865010 tacttgatcggattgctctgaaacatccccagaaaattagaaacaattcaaggaccatgactcccttagaaagagacttcttatgggactccgcccctca 42864911  T
Q  499 aaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||| || |||||||||||    
T  42864910 aaatccaaaattcaatcgtttagaccca 42864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 150 - 429
Target Start/End: Original strand, 3936100 - 3936388
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||  |||||||| ||||||||||| | |||||||    
T  3936100 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccaaaaaccccctaaacaccctttttcaaggtaa 3936199  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||| |  |||||||||||||||  |||| |||||||||  ||||        ||||||| |||  ||||||||||||||||||||| ||  ||||||    
T  3936200 aacagtccgaattatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactc 3936299  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    | |||||| | ||||||||||||||||| | |||||||||||||||||| ||||||| || |||||||||||||||| |||||||||||    
T  3936300 tcatccttctattttgggtcattgttacctattcttagtcaaaaatcggattttcggactgcttgatcggattgctccgaaacttcccc 3936388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 150 - 426
Target Start/End: Original strand, 36408363 - 36408648
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||| ||||||||||||||||  | | | ||||||||||||||||||||||| ||||||||||| |  ||||||| | | | |||||||    
T  36408363 cggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattacataatccggaaacctcataaacaccatctttcaaggtaa 36408462  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || |||||  |||||||||||||||| |||||||||||||| |||||        ||||||| ||||  |||||||||||||||||||| ||  ||||||    
T  36408463 aacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaactc 36408562  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttc 426  Q
    |  | ||| ||||||||||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  36408563 tctttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaacttc 36408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 96 - 526
Target Start/End: Complemental strand, 24042419 - 24041979
Alignment:
Q  96 atttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatagagt 185  Q
    ||||||||||  |||||||| ||||| |||| |||||||||||||||||| ||||||          ||||| |||||||||||||||||||||||  |     
T  24042419 atttcataattcggaatggtgttttcctttgatatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggc 24042320  T
Q  186 gtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagca 284  Q
    | ||||||||||||||||||||||||| |||||||||||||| ||||||| ||| | ||||||||| ||||| ||||||||||||||||| |||||||||    
T  24042319 gcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagca 24042220  T
Q  285 caaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg-ttttgggtcattgttacttgttct 375  Q
    ||||| |||||        ||||||  |||| ||||||||||||||||| ||| ||  ||||||| ||||||  | |||||||||||| |||            
T  24042219 caaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcatccttccgtttttgggtcatt-tta-------- 24042129  T
Q  376 tagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggac 475  Q
      | |||||||||||||||| ||||| ||||||||| ||||| |||||||||||                ||||||||||||||||||  |||  |||||    
T  24042128 gggacaaaaatcgggttttcaggctatttgatcggactgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcctgtag-tgggac 24042030  T
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  24042029 ttcttacgggactccgcccctcaaaatccaaaactccatcgtttagaccca 24041979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 524
Target Start/End: Original strand, 19818527 - 19818754
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||||  |||||||||||||||||||| ||  ||||||| |||||| ||||||||||||||||||| ||||||| ||| |||||||||||||     
T  19818527 taacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcgaaaatcgggttttt 19818626  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    || ||||||||||||||||||| ||||||| |||                ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19818627 ggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttacgggactccacccc 19818726  T
Q  496 tcaaaatccaaaattccattgtttagacc 524  Q
    || |||||||||||||||| |||||||||    
T  19818727 tc-aaatccaaaattccatcgtttagacc 19818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 304 - 526
Target Start/End: Original strand, 43737237 - 43737459
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||||||||||||||||| ||  ||||||| |||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  43737237 atagtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctact 43737336  T
Q  404 tgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatc 503  Q
    |||||||||||||| |||| || |||                ||||||||||||||||||||||||||| |||||||  |||||||| ||||||||||||    
T  43737337 tgatcggattgctccgaaattttcccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttgtgggactccgcccctcaaaatc 43737436  T
Q  504 caaaattccattgtttagaccca 526  Q
     |||||||||| |||||||||||    
T  43737437 taaaattccatcgtttagaccca 43737459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 296 - 526
Target Start/End: Complemental strand, 7115282 - 7115051
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| ||| |||| ||||||||||||| || |||||||| |||||| | |||| ||||||||||| |||||||||||||||||||| ||||||    
T  7115282 taacatggataaccaatttatggacaatattaatcttgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttc 7115183  T
Q  396 gggctacttgatcggattgctctgaaacttcc-ccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccaccc 494  Q
    |||||||||||||| ||||||||||||||||| |                  ||||||| || |||||||||||||||||||||||||||||||||  ||    
T  7115182 gggctacttgatcgtattgctctgaaacttcctcagaaaatcagaaaaaaaatcaaggatcaagactcccttagaagggacttcttacgggactccttcc 7115083  T
Q  495 ctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||||||||||||||||    
T  7115082 ctcaaaatccaaaattccattgtttagaccca 7115051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 152 - 502
Target Start/End: Original strand, 33151200 - 33151555
Alignment:
Q  152 gattttataatccggaaacttcaaaaaa-tagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccc-tttcttaaggtaa 248  Q
    |||||| |||| ||||||||| |||||| ||| | |  ||| ||||||| | |||||||||| ||||||||| |||| |||||| | ||| |||||||||    
T  33151200 gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataatccggaaatcccctaaacactcattttttaaggtaa 33151299  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||| ||||| |||||||||||||| |||||        ||||||| ||||     ||||||||||||||||| ||  ||||||    
T  33151300 aacagttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatag-----ttagggacaatattaatcttcctaactc 33151394  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| | ||||||||||||||||  ||||||||||||||||| |||||||| | |||||||||||||||  || ||||||| |||               
T  33151395 tcatccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggattattccgaaactt-cccagaaaatcaga 33151493  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaat 502  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33151494 aaaaattcaaggaccatgactcccttagaagggacttcttacgggactccacccttcaaaat 33151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 150 - 370
Target Start/End: Complemental strand, 37518462 - 37518233
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||| | |||||||    
T  37518462 cggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 37518363  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| ||||||||| |||| |||||        |||||   |||| ||||||||| ||| ||||||| ||  ||||||    
T  37518362 aacagttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaactc 37518263  T
Q  341 ttatccttttgttttgggtcattgttactt 370  Q
    | |||||| |||||| ||||||||||||||    
T  37518262 tcatccttctgttttaggtcattgttactt 37518233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 43737116 - 43737234
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | |||||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||    
T  43737116 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaacacccttt-ttaaggtaa 43737214  T
Q  249 aatagttcagattatataat 268  Q
    |||||||| |||||||||||    
T  43737215 aatagttcggattatataat 43737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 356 - 526
Target Start/End: Complemental strand, 37518215 - 37518045
Alignment:
Q  356 gggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggacc 455  Q
    ||||||||||||| |||||||||| |||||| ||||||| || ||| ||||||||||||||| |||||||||||                ||||||||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggacc 37518116  T
Q  456 atgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  37518115 atgactcccatagaagagacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagaccca 37518045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 522
Target Start/End: Complemental strand, 24690346 - 24690122
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgg-gtttt 394  Q
    ||||||| || | ||||||| ||||||||||||| |   ||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||  ||||    
T  24690346 taacatggatcgtcattttatggacaatattaatctacctaactctcatccttttgttttgggtcattgttacccgttcttagtcaataatcggattttt 24690247  T
Q  395 cgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccaccc 494  Q
    ||||||||||||||||||||||| |||||||| ||                |||||||| ||||||||||||   ||||||||||||| |||||  ||||    
T  24690246 cgggctacttgatcggattgctccgaaacttctccataaaatcagaaaaaattcaaggatcatgactccctt---agggacttcttacaggactttaccc 24690150  T
Q  495 ctcaaaatccaaaattccattgtttaga 522  Q
    ||||||||||||||||| || |||||||    
T  24690149 ctcaaaatccaaaattcaatcgtttaga 24690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 117 - 414
Target Start/End: Complemental strand, 31985720 - 31985411
Alignment:
Q  117 ttttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaa--tagagtgtgttacatgatgtttccggattacatga 214  Q
    ||||| ||||||||| | |||||||  || |||| |||||| ||||||| |||| ||||||||  ||| | | |||||||||| ||| |||||||||| |    
T  31985720 ttttcctttgttataagatgaaaaaatgagttacagattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataa 31985621  T
Q  215 tccggaaaccccc-aaacaccctttcttaaggta-aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgta 304  Q
    | || | |||||  ||||||| ||| | ||||   ||| ||||| ||||||||||| ||||| |||||| |||||||  ||||        ||||||| |    
T  31985620 ttcgaacaccccttaaacaccatttttcaagggggaaacagttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaa 31985521  T
Q  305 tagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctactt 404  Q
    ||| ||||||| ||||||||||||| ||| ||||||| ||| || ||||||||||||||||||   ||||||||||||||||| |||||| |||||||||    
T  31985520 tagtcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctactt 31985421  T
Q  405 gatcggattg 414  Q
    |||| |||||    
T  31985420 gatcagattg 31985411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 247 - 425
Target Start/End: Original strand, 1518797 - 1518983
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataac 338  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||  ||||        ||||||  |||  ||||||| ||||||||||||| ||  ||||    
T  1518797 aaaacagttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaac 1518896  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    ||| |||||| | |||||||| |||||||  |||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||    
T  1518897 tctcatccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctccgaaactt 1518983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 26555128 - 26555040
Alignment:
Q  337 actcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    ||||| |||||| | ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactt 26555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 447 - 524
Target Start/End: Complemental strand, 3304612 - 3304535
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  3304612 tcaaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacc 3304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 318 - 429
Target Start/End: Complemental strand, 36946282 - 36946171
Alignment:
Q  318 gacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
    |||||||||||  ||  ||||||| ||||||||||||||||||||||||| ||||| |||||||||| || |||||||||| |||||||||| ||||||     
T  36946282 gacaatattaagcttcctaactctcatccttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgctt 36946183  T
Q  418 tgaaacttcccc 429  Q
     |||||||||||    
T  36946182 cgaaacttcccc 36946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 521
Target Start/End: Original strand, 43186083 - 43186157
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttag 521  Q
    ||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  43186083 tcaaggatcaagactcccttagaagggacttcttacgggactccgcccctaaaaatccaaaattccatcgtttag 43186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 448 - 526
Target Start/End: Complemental strand, 28230352 - 28230274
Alignment:
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||||||| |  ||| ||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  28230352 caaggaccatgactcccttagaaagaccttattatgggactccacccctcaaaatctaaaattccatcgtttagaccca 28230274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 6467711 - 6467830
Alignment:
Q  172 tcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaa-ggtaaaatagttcagattatataatc 269  Q
    ||||||||||| |||||||||||||| | | |||||||||| ||||| | |||||| ||||||||||| | || || |||| ||||| ||||||||||||    
T  6467711 tcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccccctaaacaccctttttcaagggaaaaacagttcggattatataatc 6467810  T
Q  270 cgaacagtatcagcacaaat 289  Q
    ||||| ||||||||| ||||    
T  6467811 cgaactgtatcagcataaat 6467830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 16278322 - 16278389
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||| ||||||||||    
T  16278322 gactcccttagaagggacttcttacgggactccgcacatcaaaatccaaaatttcatcgtttagaccc 16278389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 5731128 - 5731063
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||    
T  5731128 gactcccttagaagggacttcttacgagactcca-ccctcaaaatccaaaattccatcatttagacc 5731063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 428
Target Start/End: Complemental strand, 37398877 - 37398771
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  ||||||| ||| || |||||| ||||||||||| ||||||||||| ||||||  ||||||  |||||||||||| |||||||| |||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  422 acttccc 428  Q
    |||||||    
T  37398777 acttccc 37398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 5278411 - 5278501
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaat 386  Q
    ||||||| |||| ||||||| ||| ||||||||| ||  |||||||||||||| ||||||||||||||||||   ||||||||||| ||||    
T  5278411 taacatggatagtcattttaaggataatattaatcttcctaactcttatccttctgttttgggtcattgttagccgttcttagtcacaaat 5278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 428
Target Start/End: Complemental strand, 6467138 - 6467020
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcg 409  Q
    |||||| || |||||||||| ||  |||||||  ||||| | |||| |||||||||||  |||||||||| ||||||  ||| ||| |||||||||||||    
T  6467138 attttaagggcaatattaattttcctaactctcttccttctattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcg 6467039  T
Q  410 gattgctctgaaacttccc 428  Q
    ||||| ||||||| |||||    
T  6467038 gattgttctgaaatttccc 6467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 525
Target Start/End: Complemental strand, 8214442 - 8214377
Alignment:
Q  460 ctcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||||||||||||| |||| | ||||||| |||||||||||||||  |||||||||    
T  8214442 ctcccttagaagggacttcttacgagacttcgcccctcacaatccaaaattccatcttttagaccc 8214377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 39581913 - 39581998
Alignment:
Q  323 tattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||| || |||||||| || ||| |||||| ||||||||||| || ||||| |||||||||| |||||| |||||||||||||    
T  39581913 tattaatcttcataactctcattcttctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatc 39581998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 526
Target Start/End: Complemental strand, 31985378 - 31985299
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| |||||||| | ||||||||| ||||||| ||||||  ||||||||| |||||||||| || |||||||||||    
T  31985378 tcaaggatcatgactctcatagaagggatttcttacaggactctgcccctcaaactccaaaattcaatcgtttagaccca 31985299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 526
Target Start/End: Complemental strand, 48705846 - 48705781
Alignment:
Q  461 tcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||| ||||||||||||||||  ||||||| ||||||||| ||||||||| ||| |||||||||||    
T  48705846 tcccgtagaagggacttcttataggactccgcccctcaaattccaaaatttcatcgtttagaccca 48705781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 526
Target Start/End: Complemental strand, 32701110 - 32701042
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||||||||||||| |||  |||||||||||  || |||||||  ||||||||||    
T  32701110 gactcccttagaagggacttcttacggggctcttcccctcaaaatttaacattccatcttttagaccca 32701042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 521
Target Start/End: Complemental strand, 47239561 - 47239505
Alignment:
Q  465 ttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttag 521  Q
    |||||||||||||||||||||||| | || |||||||||||||||| ||| ||||||    
T  47239561 ttagaagggacttcttacgggacttcgcctctcaaaatccaaaatttcatcgtttag 47239505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 16983660 - 16983613
Alignment:
Q  381 aaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  16983660 aaaaatctggttttcaggctacttgatcagattgctctgaaacttccc 16983613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 526
Target Start/End: Complemental strand, 26554995 - 26554945
Alignment:
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| |||||||  ||||||||||||||||||||||| |||||||||||    
T  26554995 ttcttatgggactctgcccctcaaaatccaaaattccatcgtttagaccca 26554945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 526
Target Start/End: Original strand, 30861399 - 30861460
Alignment:
Q  465 ttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||| ||| ||| |||||| |||| ||||||| ||| |||||||||||    
T  30861399 ttagaagggacttcttacaggattcctcccctcgaaattcaaaatttcatcgtttagaccca 30861460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 48776165 - 48776092
Alignment:
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    |||| |||||||| || ||||||||||||||||||  | |||||| ||||||| ||| |||||||| |||||||    
T  48776165 ttttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctccgaaactt 48776092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 6466971 - 6466919
Alignment:
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||| |||||||| |||||||||||| |||||| ||| |||||||||||    
T  6466971 acttcttatgggactccgcccctcaaaatctaaaatttcatcgtttagaccca 6466919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 522
Target Start/End: Original strand, 1519012 - 1519087
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    ||||||| || || |||| ||||||||||||| || | |||||| | |||||||||| |||||||||| |||||||    
T  1519012 tcaaggatcaagattcccgtagaagggacttcctatgtgactccgctcctcaaaatctaaaattccatcgtttaga 1519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 526
Target Start/End: Complemental strand, 37398732 - 37398669
Alignment:
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||| |||||||||| | || ||||| |||||||||||||||||  || |||||||||||    
T  37398732 ccttagaatggacttcttatgtgattccactcctcaaaatccaaaattgtatagtttagaccca 37398669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 2816933 - 2816891
Alignment:
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattc 511  Q
    ||||||||||||||||||||| |||||| |||||| |||||||    
T  2816933 aagggacttcttacgggactcgaccccttaaaatctaaaattc 2816891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 525
Target Start/End: Complemental strand, 37402818 - 37402756
Alignment:
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||| |||||||||| |||| ||| | |||||||||||||||||  || ||||||||||    
T  37402818 ccttagaatggacttcttatgggattccgcacctcaaaatccaaaattttatagtttagaccc 37402756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 36946458 - 36946417
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttac 192  Q
    ||||||||||||||| |||| ||||||||||||||| |||||    
T  36946458 ggattttataatccgaaaacctcaaaaaatagagtgcgttac 36946417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 9151806 - 9151838
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatag 182  Q
    |||||||| ||||||||||||||||||||||||    
T  9151806 cggattttgtaatccggaaacttcaaaaaatag 9151838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 37218272 - 37218240
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||||| ||||||||||||||||    
T  37218272 cggattttataatccgaaaacttcaaaaaatag 37218240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 47239622 - 47239570
Alignment:
Q  375 ttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcc 427  Q
    ||||||||||||| | |||||||  ||||||||| |||||||| |||||||||    
T  47239622 ttagtcaaaaatctgattttcggagtacttgatcagattgctccgaaacttcc 47239570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 103 - 526
Target Start/End: Complemental strand, 31520116 - 31519676
Alignment:
Q  103 aatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatagagtgtgttac 192  Q
    |||| |||||||| ||||| ||||||||||||||||||||||| ||||||          ||||| |||||| ||||||||||||||||||| | |||||    
T  31520116 aatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttac 31520017  T
Q  193 atgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcc 291  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  31520016 atgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcc 31519917  T
Q  292 taaata--------acatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaa 383  Q
    ||||||        |||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  31519916 taaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgttcttagtcaaa 31519817  T
Q  384 aatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacg 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||| |||||||||||||| |||||||    
T  31519816 aatcgggttttcgggctacttgatcggattgctctgaaacttccccataaaatcagaaaaaattcaaggaccatgacacccttagaagggacgtcttacg 31519717  T
Q  484 ggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||  |||||||||||||||||||||||||||||||||||    
T  31519716 ggactc--cccctcaaaatccaaaattccattgtttagaccca 31519676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 8885620 - 8885234
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| |||||||| || | |||||||    
T  8885620 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccattttcaaggtaa 8885521  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| |||||||||||| |||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||    
T  8885520 aacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 8885421  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaac-ttccccnnnnnnnnnn 439  Q
    | |||||| |||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||               
T  8885420 tcatccttctgttttgggttattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacattcccagaaaatcaga 8885321  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
          ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||    
T  8885320 aaaaaattcaaggaccatgactcccgtagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcatttagaccca 8885234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 72 - 426
Target Start/End: Original strand, 21004294 - 21004661
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taa 161  Q
    ||||||| || ||||||||| | |||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||           |||    
T  21004294 caaaaatgcccttgaggtttccagatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaa 21004393  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    ||||||||||| ||||||||  | | ||||||| ||||||||||||||||| ||||| |||| ||| ||||||| ||| ||||||||||||||||| |||    
T  21004394 tccggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaaaactccctaaacaccattttttaaggtaaaatagttcggat 21004492  T
Q  261 tatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgt 352  Q
    |||||||||||     |||||| ||||||||||||        |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  21004493 tatataatccg-----tatcagtacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatccttttgt 21004587  T
Q  353 tttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttc 426  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  21004588 tttgggtcattgttacatgttcttagtcaaaaatcgggttttccggctacttgatcagattgctctgaaacttc 21004661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 108 - 526
Target Start/End: Original strand, 3094621 - 3095062
Alignment:
Q  108 ggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatagagtgtgttacatgat 197  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||          ||||| |||||||||||||||||||||||| | |  |||||||||    
T  3094621 ggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgat 3094720  T
Q  198 gtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaata----gttcagattatataatccgaacagtatcagcacaaatcct 292  Q
    ||||||||||||||| |||||||||||||| ||||||| ||| | ||||||||| |    |||| |||||||||||| |||| |||||||||||||| ||    
T  3094721 gtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaactgtatcagcacaaattct 3094820  T
Q  293 aaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaa 384  Q
    |||        ||||||| |||  ||||||| ||||||||||||| ||  ||||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  3094821 aaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaa 3094920  T
Q  385 atcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgg 484  Q
    |||| |||||||| ||||||||||||||||||| ||||||| |||                ||||||||||||||||||| ||| ||||||| ||||||     
T  3094921 atcgagttttcggactacttgatcggattgctccgaaacttgcccagaaaatcataaaaaattcaaggaccatgactcccataggagggactacttacgc 3095020  T
Q  485 gactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  3095021 gactccacccctcaaaatccaaaatttcatcgtttagaccca 3095062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 150 - 523
Target Start/End: Original strand, 28916775 - 28917149
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | |||| |||||||||| ||||||||| | |||||||||||| ||||||||||||||||||||     
T  28916775 cggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgtttctggattacataaaccggaaaccccctaaacaccctttcttaaggta- 28916873  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatattaatatttataactc 340  Q
           ||||||||||||||||||| |||||||||||||| ||||| |        ||||| |||| ||||||||||||||||||||| ||| ||||||    
T  28916874 -------cagattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactc 28916966  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagt-caaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnn 439  Q
    | |||||| ||||||||||||||||||| ||||||| ||  ||||||||||||||| | ||||||||||||||||||| |||||||||||              
T  28916967 tcatccttctgttttgggtcattgttacatgttcttggtaaaaaaatcgggttttc-gactacttgatcggattgctccgaaacttccccagaaaatcag 28917065  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
          ||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  28917066 aaaaaattcaaggaccatgactcccttagaaggaacttcttatgggactccgcccctcaaaatccaaaattccattgtttagac 28917149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 42281061 - 42280673
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacat---gatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaagg 245  Q
    |||||||  ||||||| |||||||||||||||||| | |||||||   ||||||||| |||||||| |||||||||||||| ||||||||||| | ||||    
T  42281061 cggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaagg 42280962  T
Q  246 taaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataa 337  Q
    ||||| ||||| |||||||||||| |||| ||||||||||||||  ||||        ||||||| |||| ||||||||||||||||||||| ||  |||    
T  42280961 taaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcatagtcattttagggacaatattaatcttcctaa 42280862  T
Q  338 ctcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnn 437  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||| ||  |||||||||||            
T  42280861 ctctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactacttgatcggattacttcgaaacttccccagaaaatc 42280762  T
Q  438 nnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
            |||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  42280761 aaaaaaagttcaaggaccataactcccctagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagaccca 42280673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 152 - 511
Target Start/End: Original strand, 44106217 - 44106585
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaa 250  Q
    |||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  44106217 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 44106316  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
     ||||| |||||||||||| |||| |||||||||||||| |||||        ||||||| |||| ||||  | ||||||||||||| ||  |||||||     
T  44106317 cagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatggacaatattaatcttcctaactctc 44106416  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||                 
T  44106417 atccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggttttcgtgctacttgatctgattgctctgaaacttccccataaaataaaaaa 44106516  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattc 511  Q
        |||||||||||||||||||||||||   ||||||| |||||||   |||||||||||||||||||    
T  44106517 aaaatcaaggaccatgactcccttagaagttccttcttatgggactctgtccctcaaaatccaaaattc 44106585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 27928108 - 27927732
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||| |||||||||| ||||||| ||| | |||||||    
T  27928108 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcaggaaaccccctaaacaccatttttcaaggtaa 27928009  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| |||||||| |||||||||||| ||  ||||||    
T  27928008 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactc 27927909  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| |||||||||| |||||| |||||||||| |||||||||| |||||||| |||||||||||               
T  27927908 tcatccttctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaacttccccataaaatcaga 27927809  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         ||||||||||||||||| |         |||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  27927808 aaaaattcaaggaccatgactctc---------acttcttacgggactccacccctccaaatccaaaatttcatcgtttagaccca 27927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 34853321 - 34853705
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||| |||||| ||||||||| | | ||||||||||||||||||||||||  ||| |||||||| | ||||||||||| | |||||||    
T  34853321 cggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattacaa-atctggaaaccctctaaacaccctttttcaaggtaa 34853419  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||| | ||||||||||||| ||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||    
T  34853420 aacagtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 34853519  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||  |||||||||||||||||| |||||||||||               
T  34853520 tcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctccgaaacttccccataaaatcaga 34853619  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         ||||||||||||||||||||||||| |||||||||  |||||||| |||||||||||  |||||||||| |||||||||||    
T  34853620 aaaaattcaaggaccatgactcccttagaaaggacttcttctgggactccgcccctcaaaataaaaaattccatcgtttagaccca 34853705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 150 - 427
Target Start/End: Original strand, 9073496 - 9073782
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||  |||||||||||||||||||||||   |  ||||||||||||||||||||||||| |||| ||||||||| ||||||| ||| | || || |    
T  9073496 cggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgtttccggattacataatccagaaaccccctaaacaccttttttcaaagtga 9073595  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||||||| |||||||||| |||||| |||| ||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||| ||    
T  9073596 aatagttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtc 9073695  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcc 427  Q
    | |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||    
T  9073696 tcatccttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcc 9073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 296 - 526
Target Start/End: Complemental strand, 11698328 - 11698098
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| ||||||||||| ||||||||| ||  ||||||| ||||||  ||||| |||||||||||  ||||||||||||||||||||||||||    
T  11698328 taacatggatagtcattttagggataatattaatcttcctaactctcatccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttc 11698229  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    |||||||||||||||| ||||| |||||||||||                ||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  11698228 gggctacttgatcggaatgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacgtcttacgggactccgcccc 11698129  T
Q  496 tcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||| |||||||||||    
T  11698128 tcaaaatccaaaattccatcgtttagaccca 11698098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 228 - 524
Target Start/End: Complemental strand, 14164145 - 14163841
Alignment:
Q  228 aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga 319  Q
    ||||||||||| | ||||||||| ||||| |||||||||||| |||  |||||||||||||| |||||        ||||||| |||| |||||||||||    
T  14164145 aaacaccctttttcaaggtaaaacagttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggga 14164046  T
Q  320 caatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctg 419  Q
    |||||||||| ||  ||||||| |||||| |||||| |||||||||||| ||||||||||||||||  | ||||||||| ||||||||||| |||||| |    
T  14164045 caatattaattttcctaactctcatccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctccg 14163946  T
Q  420 aaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttt 519  Q
    |||| |||||                ||||||||||||| |||||||| ||   ||||||||||||||||| |||||||||||  ||||||||||  |||    
T  14163945 aaacctccccagaaaatcagaaaaaattcaaggaccatggctcccttataaataacttcttacgggactccgcccctcaaaataaaaaattccatcattt 14163846  T
Q  520 agacc 524  Q
    |||||    
T  14163845 agacc 14163841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 95 - 329
Target Start/End: Original strand, 16310526 - 16310779
Alignment:
Q  95 gatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattac----------ggattttataatccggaaacttcaaaaaatagag 184  Q
    ||||||||||||  ||||||| ||||| |||||||| |||||||||||||| ||||          ||||||| |||||||||||||||||||||||| |    
T  16310526 gatttcataatccagaatggtgttttcctttgttatggggtgaaaaatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaataggg 16310625  T
Q  185 tgtgttacatgatgtttccggattacatgatccggaaac-ccccaaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagc 283  Q
    || |||| ||||| |||||||||||||  |||| ||||| ||| ||||||||||| | ||||||||| |||||| ||||||||||||||||  |||||||    
T  16310626 tgcgttagatgatttttccggattacacaatccagaaactccctaaacaccctttttcaaggtaaaacagttcaaattatataatccgaactatatcagc 16310725  T
Q  284 acaaatcctaaa--------taacatgtatagccattttagggacaatattaat 329  Q
    |||||| |||||        ||||||| |||| |||||||||||||||||||||    
T  16310726 acaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaat 16310779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 296 - 526
Target Start/End: Original strand, 36980716 - 36980946
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||  ||||||| |||||||||| || ||| |||||||||||||| | ||||||||||||||||  | |||||||||||||||| | |||||    
T  36980716 taacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttagctattcttagtcaaaaatccgattttc 36980815  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    |||||||||||||||||||||| ||||||||| |                 ||||||| || ||||||| ||||||||||||||||| ||||||| | ||    
T  36980816 gggctacttgatcggattgctccgaaacttccacagaaaatcaggaaaaaatcaaggatcaagactcccctagaagggacttcttacaggactccgctcc 36980915  T
Q  496 tcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| |||||| |||| |||||||||||    
T  36980916 tcaaaattcaaaatcccatcgtttagaccca 36980946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 252 - 429
Target Start/End: Complemental strand, 36165902 - 36165716
Alignment:
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| ||||||||||||||||| ||||||||||||||  ||||        ||||||| ||||  ||||||| |||||||||||| ||  ||||||| |    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcggg-ttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| |||| |||| |||||||||||||||||||||| |||||||||||    
T  36165802 tccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttcccc 36165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 171 - 329
Target Start/End: Original strand, 40994805 - 40994972
Alignment:
Q  171 ttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatc 269  Q
    |||||||||||| | | ||||||||||||||||||||||||| ||| | |||||||| ||||||||||| | ||||||||| ||||| ||||||||||||    
T  40994805 ttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaacagttcggattatataatc 40994904  T
Q  270 cgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaat 329  Q
    ||||| |||||||||||||| |||||        ||||||| |||| |||||||||||||||||||||    
T  40994905 cgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaat 40994972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 526
Target Start/End: Complemental strand, 17119943 - 17119662
Alignment:
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| |||||||||||| |||  |||||||||||||| |||||||        ||||| || | ||||||| ||||||||||||| ||  ||||||| |    
T  17119943 agttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctca 17119844  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnn 443  Q
    ||||| |||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||| ||| |||||||||||                  
T  17119843 tccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttccccaggaaattagaaaa 17119744  T
Q  444 nnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
       ||||||| ||| |||||| ||||||  |||||||||||| |  ||||||||||||||||||||| ||| |||||||||||    
T  17119743 aaatcaaggatcattactcccgtagaagatacttcttacggg-caacacccctcaaaatccaaaatttcatcgtttagaccca 17119662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 88 - 329
Target Start/End: Original strand, 37248478 - 37248738
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaa 177  Q
    |||| ||||||||| ||||  ||||||| ||||| ||||||||||||||||||||||| ||||||          ||||| ||||||| |||||| ||||    
T  37248478 gtttccggatttcaaaatccagaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttctggattttgtaatccgaaaacttaaaaa 37248577  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacag 276  Q
    ||||| | | |||| |||||||||||||||||||| |||| ||||||||| ||||||| ||| | ||||||||| ||||   |||||||||||||||  |    
T  37248578 aatagggcgcgttagatgatgtttccggattacataatccagaaaccccctaaacaccatttttcaaggtaaaacagtttgaattatataatccgaattg 37248677  T
Q  277 tatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaat 329  Q
    ||||||||||||| |||||        | ||||| |||| |||||||||||||||||||||    
T  37248678 tatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaat 37248738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 247 - 428
Target Start/End: Original strand, 40392626 - 40392815
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataac 338  Q
    |||| ||||| |||||||||||| | || |||||||||||||| |||||        ||||||| |||| ||||||| ||||||||||||| ||  ||||    
T  40392626 aaaacagttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaac 40392725  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    ||||||| || || ||||||||||||||| |||||||||||||||||||  ||||||  |||||||||||||||| ||| ||||||||||    
T  40392726 tcttatctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 40328044 - 40328176
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| || | ||||||| ||| ||||||||| ||  ||||||| ||| || |||||||||| |||||||| ||||||||||||||||||||||||||    
T  40328044 taacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgttacctgttcttagtcaaaaatcgggttttc 40328143  T
Q  396 gggctacttgatcggattgctctgaaacttccc 428  Q
    || |||||||||||||||||||  |||||||||    
T  40328144 ggactacttgatcggattgctccaaaacttccc 40328176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 1076702 - 1076834
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| |||||||| ||||||||||||| || ||| |||| ||| ||||||||||  ||||||||| |||||||| |||||||||| | |||||    
T  1076702 taacatgaatatccattttatggacaatattaatcttcatagctctcatcattttgttttgcatcattgttagttgttcttggtcaaaaatctgattttc 1076801  T
Q  396 gggctacttgatcggattgctctgaaacttccc 428  Q
    |||||||||||| ||||||||  ||||||||||    
T  1076802 gggctacttgattggattgcttcgaaacttccc 1076834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 304 - 422
Target Start/End: Original strand, 34645532 - 34645650
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||| ||| ||| ||||| ||| ||||||| |||||| |||||||| |||||||||| |||||||||||||| ||| |||||||||||||||    
T  34645532 atagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggttttcgggctact 34645631  T
Q  404 tgatcggattgctctgaaa 422  Q
    |||||  ||||||| ||||    
T  34645632 tgatcacattgctccgaaa 34645650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 429
Target Start/End: Original strand, 6395244 - 6395364
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||| ||||||||||||  ||  ||||||| || ||| |||||| |||||||||||  ||||| |||||||||||| | ||||||||||||||||||    
T  6395244 cattttatggacaatattaaacttcctaactctcattcttctgttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatc 6395343  T
Q  409 ggattgctctgaaacttcccc 429  Q
    |||||| |||||||| |||||    
T  6395344 ggattgttctgaaacatcccc 6395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 36317943 - 36318059
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||  ||||||| ||||||||||||| ||| ||||||||||| ||   ||||||||||||||||  |||||||||||| ||||  | |||||    
T  36317943 taacatggataatcattttaaggacaatattaatctttctaactcttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttc 36318042  T
Q  396 gggctacttgatcggat 412  Q
    |||||||||||||||||    
T  36318043 gggctacttgatcggat 36318059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 309 - 513
Target Start/End: Original strand, 28423581 - 28423785
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    |||||||  |||||||||||| ||  ||||||| |||||| | ||||| |||||||| | ||||||||||||||||||  | ||||||||||||||||||    
T  28423581 cattttacagacaatattaatcttcctaactctcatccttctattttgcgtcattgt-agttgttcttagtcaaaaattagtttttcgggctacttgatc 28423679  T
Q  409 ggattgctctgaaacttccccnnnnnnnnnnnnnnnnt-tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaa 507  Q
    ||||| ||| |||||||  ||                | ||||||| || ||||||| ||||| |||||||||| ||||||||| |||||||||||||||    
T  28423680 ggattactccgaaacttagccagaaaattaaaaaaaatatcaaggatcaagactcccgtagaaaggacttcttatgggactccatccctcaaaatccaaa 28423779  T
Q  508 attcca 513  Q
    ||||||    
T  28423780 attcca 28423785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 247 - 417
Target Start/End: Complemental strand, 4259704 - 4259528
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataac 338  Q
    |||||| ||| |||||||||||| |||| |||||||||||||| ||||         ||||||  |||| ||||||| ||||||||||||| ||  ||||    
T  4259704 aaaataattcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaac 4259605  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
    | | |||||| |  ||| | ||||||||| |||||||||||||||| || ||||||||||||||| |||||| ||||||    
T  4259604 tatcatccttct--tttcgatcattgttagttgttcttagtcaaaactctggttttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 11698451 - 11698382
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaa 221  Q
    |||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatccggaa 11698382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 33472286 - 33472353
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||| ||| ||||||||||    
T  33472286 gactcccttagaagagacttcttacgggactacgcccctcaaaattcaaaatttcatcgtttagaccc 33472353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 448 - 526
Target Start/End: Complemental strand, 10840613 - 10840535
Alignment:
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| |||||||||| |||||||   ||||||||||||||||||||||||||| |||||| ||||  ||||||||||    
T  10840613 caaggatcatgactcccgtagaaggatattcttacgggactccacccctcaaaattcaaaatcccatcttttagaccca 10840535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 31234672 - 31234604
Alignment:
Q  458 gactcccttagaagggacttcttacg--ggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||| ||||||||||    
T  31234672 gactcccttagaagggacttcttacgcgggactccgccc-tcaaaatccaaaattccatcgtttagaccc 31234604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 7971252 - 7971167
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttt 157  Q
    ||||||| || ||||||||| | ||||||||||||| ||||||  ||||| || |||||||||||||||| ||| |||||||||||    
T  7971252 caaaaatgcccttgaggtttccagatttcataatctagaatggcgttttccttcgttatagggtgaaaaacggagttacggatttt 7971167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 8621593 - 8621520
Alignment:
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    |||| ||||||||||| |||||||||||||||||||   |||| | |||||||||||||||||||| |||||||    
T  8621593 ttttaggtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctccgaaactt 8621520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 40994980 - 40995044
Alignment:
Q  459 actcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||| ||||||||| || |||||||||||| || |||||||||||||||||||| ||||||||    
T  40994980 actcccgtagaagggatttattacgggactccgcctctcaaaatccaaaattccatcgtttagac 40995044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 458 - 522
Target Start/End: Original strand, 41530891 - 41530954
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||| ||||||    
T  41530891 gactcccttagaagagacttcttacgggactcc-gccctcaaaatccaaaattgcattatttaga 41530954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 7981825 - 7981890
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    ||||||||||||||||| || |||  ||||| | ||||||||||||||||||||||| ||||||||    
T  7981825 gactcccttagaagggatttgttataggacttcgcccctcaaaatccaaaattccatcgtttagac 7981890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 9845401 - 9845465
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||  |||||||||| ||||||||    
T  9845401 gacttccttagaagg-acttcttacgggactccatccctcaaaatttaaaattccatcgtttagac 9845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 40328195 - 40328256
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaa 507  Q
    |||||||| |||||||||| || |||  ||||||||||||||||| ||||||||||||||||    
T  40328195 ttcaaggatcatgactcccgtaaaagaaacttcttacgggactccgcccctcaaaatccaaa 40328256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 448 - 523
Target Start/End: Original strand, 36318095 - 36318170
Alignment:
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||| || |||| ||||||||  ||||||||| | ||||||||||||||||||  |||||||||| ||||||||    
T  36318095 caaggatcaagactaccttagaaatgacttcttatgagactccacccctcaaaatttaaaattccatcgtttagac 36318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 526
Target Start/End: Complemental strand, 4259514 - 4259464
Alignment:
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||| |||||||||||||||||||| ||  ||||||||||    
T  4259514 ttcttacgggactccgcccctcaaaatccaaaattctatcctttagaccca 4259464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 310 - 427
Target Start/End: Original strand, 7981675 - 7981792
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcg 409  Q
    |||||| ||||||| ||||  ||  |||| || |||||| |||||||||| ||||||| ||||| ||| | ||||||    ||||| |||||||||||||    
T  7981675 attttaaggacaatgttaagtttcctaaccctcatccttctgttttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcg 7981774  T
Q  410 gattgctctgaaacttcc 427  Q
    |||||||  |||||||||    
T  7981775 gattgcttcgaaacttcc 7981792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 24627998 - 24628050
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattc 511  Q
    |||||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  24627998 gactcccttagaagagacttcttacgagactcc-gccctcaaaatccaaaattc 24628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 35676705 - 35676628
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc 227  Q
    |||||||| ||||||||||||| |||||||||| | | | || ||||| |||||||||||||| ||||| | ||||||    
T  35676705 cggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccc 35676628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 526
Target Start/End: Original strand, 34645678 - 34645755
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| || ||| ||||||||| | ||||||||||||||||| | ||||  |||| ||||||||||||| ||||||||    
T  34645678 tcaaggatcaagacacccttagaatgaacttcttacgggactccgcacctc--aatctaaaattccattgtctagaccca 34645755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 36404321 - 36404234
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacacccttt 238  Q
    |||||||| ||||||| |||  ||||||||||| | |||||||||||| ||| ||||||| || ||||| |||| || |||||||||||    
T  36404321 cggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatccgaaaactcctaaacacccttt 36404234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 10833458 - 10833392
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||||||||| |||| |||||||  || ||||||||||||||| ||| ||||| ||||    
T  10833458 gactcccttagaagggactttttacaggactcc-gccatcaaaatccaaaatttcatcgtttacaccc 10833392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 24627789 - 24627855
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||| |||||||||| | |||||  ||||||||||||||||||| ||  |||||||||    
T  24627789 gactcccttagaagagacttcttacagaactcc-gccctcaaaatccaaaattctatcatttagaccc 24627855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 518
Target Start/End: Complemental strand, 32504160 - 32504126
Alignment:
Q  484 ggactccacccctcaaaatccaaaattccattgtt 518  Q
    ||||||||||||||||||||||||||| |||||||    
T  32504160 ggactccacccctcaaaatccaaaatttcattgtt 32504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 522
Target Start/End: Original strand, 9073847 - 9073892
Alignment:
Q  477 tcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||||||||||  |||||||||||||||||||| || |||||||    
T  9073847 tcttacgggactcagcccctcaaaatccaaaattctatcgtttaga 9073892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 44106143 - 44106196
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    |||| ||||||| ||||||| ||||||| ||||| ||||||| |||||||||||    
T  44106143 gtttccggattttataatctagaatggtgttttcttttgttaaagggtgaaaaa 44106196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 235; Significance: 1e-129; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 72 - 526
Target Start/End: Original strand, 34972786 - 34973249
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaact 171  Q
    ||||||| || ||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  34972786 caaaaatgcccttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggattttgtaatctggaaact 34972885  T
Q  172 tcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatcc 270  Q
    | ||||||||| | | |||||||||||||| |||| ||||| ||||| |||||||| ||||||| ||| ||||||||||||||||| |||||||||||||    
T  34972886 taaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccattttttaaggtaaaatagttcggattatataatcc 34972985  T
Q  271 gaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcat 362  Q
    |||| ||||||||| ||||||||||        |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||    
T  34972986 gaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttaggtcat 34973085  T
Q  363 tgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactc 462  Q
    |||||  |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||                 |||||||||||||||||    
T  34973086 tgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccctataaaattagaaaaaattcaaggaccatgactc 34973185  T
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
     | || |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  34973186 tcctaaaagggacttctttcgggactccgcccctcaaaatccaaaattccattgtttagaccca 34973249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 72 - 522
Target Start/End: Original strand, 32441723 - 32442191
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taa 161  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||| |||||||           |||    
T  32441723 caaaaatacccttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttaaggatttttctggattttgtaa 32441822  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaaatagttcagatt 261  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||| ||||||  ||| ||||||||||||||||| ||||    
T  32441823 tccggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccggaaacccctaaacacatttttttaaggtaaaatagttcggatt 32441922  T
Q  262 atataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtt 353  Q
    ||||||||| ||| ||| ||||||| ||| ||||        ||||||||||| ||||||||  |||||||||||| ||  |||||||||||||||||||    
T  32441923 atataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatccttttgtt 32442022  T
Q  354 ttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaagga 453  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||                ||||||||    
T  32442023 ttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaaaattcaagga 32442122  T
Q  454 ccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||||||||||||||| ||||||||| |||| | | |||||||||||  |||||| |||||||||||    
T  32442123 ccatgactcccttagaagagacttcttatgggatttcgcccctcaaaataaaaaatttcattgtttaga 32442191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 72 - 524
Target Start/End: Complemental strand, 6003928 - 6003457
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttt----------ataa 161  Q
    |||||||| | |||||||||  ||||||||||||| ||||||||  |||| ||||||||||||||||||||||| |||||||||||          ||||    
T  6003928 caaaaatatccttgaggtttctggatttcataatccggaatggtggtttcctttgttatagggtgaaaaatggagttacggattttttcgaattttataa 6003829  T
Q  162 tccggaaacttcaaaaaat--agagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcag 258  Q
    ||||||||||| ||||||   |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||  |||||||||||||||| |    
T  6003828 tccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccggaaaccccctaaacacctttt--taaggtaaaatagttcgg 6003731  T
Q  259 attatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatcctttt 350  Q
    |||||||||||||||| ||||| ||||||||| ||||        ||| |||||||| ||||||||||| ||||||||| ||  ||||||||||||||||    
T  6003730 attatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactcttatcctttt 6003631  T
Q  351 gttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaa 450  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||                |||||    
T  6003630 gttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactttcccaaaaaatcagaaaaaattcaa 6003531  T
Q  451 ggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
     |||||||||| || || ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  6003530 agaccatgacttccataaaaggggcttcttacgggactccgcccctcaaaatccaaaattctattgtttagacc 6003457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 83 - 526
Target Start/End: Complemental strand, 6229055 - 6228595
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaactt 172  Q
    |||||||||  ||||||||||||| |||||||| ||||| |||||||||||||||||||||||  ||||||||||           ||| ||||||||||    
T  6229055 ttgaggtttcaggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagctacggatttttccggattttgtaacccggaaactt 6228956  T
Q  173 caaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccc--tttcttaaggtaaaatagttcagattatataatcc 270  Q
    |||||||||| | | |||||||||||||||||||||| ||    |||||||||| ||||||||  ||| ||||||||||||||||| |||||||||||||    
T  6228955 caaaaaatagggcgcgttacatgatgtttccggattaaatt---cggaaacccctaaacacccctttttttaaggtaaaatagttcggattatataatcc 6228859  T
Q  271 gaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcat 362  Q
    |||| |||||| | |||||||||||        |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  6228858 gaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcat 6228759  T
Q  363 tgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactc 462  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||                 |||||| ||||||||||    
T  6228758 tgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttcccaaaaaaatcagaaaaaattcaagaaccatgactc 6228659  T
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    || ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  6228658 ccgtagaaggaacttcttacaggactcctcccctcaaaatccaaaattccattgtttagaccca 6228595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 19835520 - 19835905
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||    
T  19835520 cggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaa 19835619  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||||| ||||||||||| ||  ||||||    
T  19835620 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactc 19835719  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | ||| || ||||||| ||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||               
T  19835720 tcatctttctgttttgcgtcattgttacctgtttttagtcaaaagtcgggttttcggactacttgatcggattgctccgaaactttcccagaaaatcaga 19835819  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         |||||| |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19835820 aaaaattcaagtaccatgactcccctaaaagggacttcttacgggactccgcccctcaaaatccaaaattccattgtttagaccca 19835905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 150 - 524
Target Start/End: Complemental strand, 25491562 - 25491179
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||||||| |||||||||||||| ||||||| ||| | |||||||    
T  25491562 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccttttttcaaggtaa 25491463  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || | ||| |||||||||||| |||| |||||||||||||| |||||        ||||||| |||| ||||||| ||||||||||||| ||  ||||||    
T  25491462 aacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactc 25491363  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||  ||| ||||||               
T  25491362 tcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttgatcggattgctccaaaatttccccagaaaatcaga 25491263  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
         |||||||||||||||||||||||||||||||||| | |||| |||  |||||||||||||||||||||| |||||||||    
T  25491262 aaaagttcaaggaccatgactcccttagaagggacttctcaagggattccgtccctcaaaatccaaaattccatcgtttagacc 25491179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 40703664 - 40704049
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||| |||||||||||| |||  |||||||||||||||||||||||| | | | |||||||| ||||||||||| | |||||||    
T  40703664 cggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacctgaaaaccccctaaacaccctttttcaaggtaa 40703763  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||    
T  40703764 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40703863  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||  | ||||||||||||||||||||||| || ||||||||||||||||||  |||||||||||               
T  40703864 tcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaagaaacttccccagaaaatcaga 40703963  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         |||||||||||||||| | |||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||| |||||    
T  40703964 aaaaattcaaggaccatgacttcattagaaggaacttcttacgggactccgcccctcaaaatctaaaattccatcgtttaaaccca 40704049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 87 - 526
Target Start/End: Original strand, 49396935 - 49397396
Alignment:
Q  87 ggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaacttcaaa 176  Q
    ||||| |||||||||||||| |||||| | ||||| ||| ||||||||||||||||||| |||||||||||           ||||||||||||||||||    
T  49396935 ggtttccggatttcataatccggaatgatgttttcctttattatagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaa 49397034  T
Q  177 aaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaaca 275  Q
    ||||||  || |||||| |||||||  ||||||||| ||||| ||| |||  ||||| | ||| |||| |||||||||||| |||||||||| ||||||     
T  49397035 aaataggatgcgttacaagatgtttttggattacataatccgaaaatcccttaaacatcattttttaatgtaaaatagttcggattatataaaccgaact 49397134  T
Q  276 gtatcagcacaaatcctaaa--------taacatgtatagccat----tttagggacaatattaatatttataactcttatccttttgttttgggtcatt 363  Q
    ||||||||| ||||||||||        ||||||||||| ||||    |||||||||||||||||| ||  |||||||||||||||||||||| ||||||    
T  49397135 gtatcagcaaaaatcctaaacatatttgtaacatgtataaccatccattttagggacaatattaatcttcctaactcttatccttttgttttgagtcatt 49397234  T
Q  364 gttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcc 463  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||                ||||||||||||||||||    
T  49397235 gttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctctgaaactt-cccaaaaaatcagaaaaaattcaaggaccatgactcc 49397333  T
Q  464 cttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    || |||||  |||||||| |||| ||  ||||||||||||||||||| |||||||||||||||    
T  49397334 ctaagaagaaacttcttatgggattcggcccctcaaaatccaaaatttcattgtttagaccca 49397396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 83 - 429
Target Start/End: Complemental strand, 41413319 - 41412977
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatag 182  Q
    ||||| |||||||||||||||||| ||||| || ||||  ||||||||||||||||||||||| |||||||              |||||||||||||||    
T  41413319 ttgagattttcggatttcataatccggaatagtgtttttctttgttatagggtgaaaaatggagttacgga--------------aacttcaaaaaatag 41413234  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatata--atccgaacagtat 279  Q
     | | ||||||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||||||||| |||||||||  |||||||| ||||    
T  41413233 -gagcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaatagttcggattatatataatccgaactgtat 41413135  T
Q  280 cagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttg 371  Q
    ||||||||||||||||        |||||||||||| ||||||||| ||||||||||| ||  ||||||||||| ||||||||| |||||||||||| ||    
T  41413134 cagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgttttaggtcattgttacatg 41413035  T
Q  372 ttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  41413034 ttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttcccc 41412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 153 - 523
Target Start/End: Complemental strand, 46440438 - 46440057
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    |||||||||||||||||||| |||||||||   | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  46440438 attttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac 46440339  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| |||||||||||||||||  ||||||||||||| |||||        ||||||| |||  |||||||||||||||| |||| || |||||||| |    
T  46440338 agttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagggacaatactaatcttcataactctca 46440239  T
Q  344 tccttttgttttgggtcattgttac--ttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnn 441  Q
    ||||| | |||| | ||||||||||   |||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||||                
T  46440238 tccttctcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgctccgaaacttccccagaaaatcagaa 46440139  T
Q  442 nnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
        |||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  46440138 aaaattcaaggaccatgactcccaaagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagac 46440057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 152 - 526
Target Start/End: Complemental strand, 17933302 - 17932919
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaa 250  Q
    |||||| |||||| ||||||||||||||||| | | ||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||||||||||    
T  17933302 gattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccccttaaacacccttttttaaggtaaaa 17933203  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
     ||||| |||||||||||||||||||||||||||||||| |||||        ||||||| |||  ||||||||||||| ||||||| ||  |||||||     
T  17933202 cagttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaactctc 17933103  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||| | ||||| | | ||||||||||||||||| |||||||| ||                 
T  17933102 atccttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttctccagaaaatcagaaa 17933003  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
       ||||||||||||||||||||||||| | |||||||| | || ||| || |||||||||||||||||||| |||||||||||    
T  17933002 aaattcaaggaccatgactcccttagaaagaacttcttaagagattccgcctctcaaaatccaaaattccatagtttagaccca 17932919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 25752611 - 25752225
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||| |||||||||||| | |  ||||||||||||||| |||||||| ||||| |||||||  ||||||||||| | |||||||    
T  25752611 cggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttttcaaggtaa 25752512  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| |||||||| |||||||  |||| ||||||||| |||||        ||||||| |||| ||||||| ||||||||| ||| ||  || |||    
T  25752511 aacagttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaatcttcctagctc 25752412  T
Q  341 ttatccttttgtttt-gggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnn 439  Q
    | ||| || |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||              
T  25752411 tcatctttatgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaacttccccagaaaatcag 25752312  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
          |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  25752311 aaaagattcaaggaccatgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 25752225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 188 - 525
Target Start/End: Complemental strand, 2506160 - 2505814
Alignment:
Q  188 gttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcaca 286  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||| ||||  ||||||||||||||||| |||||||||||    
T  2506160 gttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagtttggattatataatccgaactgtatcagcaca 2506061  T
Q  287 aatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttag 378  Q
    |||  ||||        ||||||| |||| ||||||||||||||||||||| ||  ||| ||| |||||| ||||||||||||||||||| |||||||||    
T  2506060 aattttaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaattctcatccttctgttttgggtcattgttacatgttcttag 2505961  T
Q  379 tcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttc 478  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| | |                |||||||||||||||||||  ||||||||||||    
T  2505960 tcaataatcgggttttcgggctacttgatcggattgctccgaaactttctcagaaaagcagaaaacattcaaggaccatgactccccaagaagggacttc 2505861  T
Q  479 ttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||| ||  |||||||||||||||||||| || ||||| ||||    
T  2505860 ttacgggattctgcccctcaaaatccaaaattctatcgtttacaccc 2505814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 159 - 526
Target Start/End: Complemental strand, 48319223 - 48318846
Alignment:
Q  159 taatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggtaaaatagttc 256  Q
    |||||||||||||||||||||||| | | ||||||||||||||| ||||||||| ||||| |||||||| ||||||| ||| || ||||||||| || ||    
T  48319223 taatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatccgaaaaccccctaaacacctttttttcaaggtaaaacagctc 48319124  T
Q  257 agattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatcctt 348  Q
     ||||||||||||||||| |||||||||||||| |||||        ||||||  |||| ||||||||||||||||||||| ||  ||||||| ||||||    
T  48319123 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcctt 48319024  T
Q  349 ttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttc 448  Q
     ||||||||||||||||||  | |||||||| ||||||||| ||||||| ||||||||||||||||||  |||| ||||||                |||    
T  48319023 ctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactacttgatcggattgcttcgaaatttccccagaaaatcagaaaaaattc 48318924  T
Q  449 aaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||| | | ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  48318923 aaggaccatgactctcctggaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagaccca 48318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 150 - 523
Target Start/End: Original strand, 7931658 - 7932038
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    ||||||||  ||||||||||||||||||||||| | | ||||||| ||||||||||||||||| |||||||||||||| |||||||| |||| || ||||    
T  7931658 cggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttccggattacataatccggaaaccccctaaacaccc-ttctcaatgtaa 7931756  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| |||||||||||| ||||  ||| ||||||||| |||||        ||||||| ||||  |||||||||||||||||||| ||  ||||||    
T  7931757 aacagttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaactc 7931856  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||| | ||||||||||||||||||| |||| || ||||||||||| |||||||| ||||||| ||||||||||  ||||||| |||               
T  7931857 tcatcc-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttggtcggattgcttcgaaactttcccagaaaatcaga 7931955  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
         ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  7931956 aaaaattcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 7932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 93 - 526
Target Start/End: Original strand, 38536103 - 38536556
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||| | |||||| ||||| ||||||||||||||||||||| | ||||||          ||||| |||| |||||||||||||||||||    
T  38536103 cggatttcataatccgaaatggtgttttcctttgttatagggtgaaaaatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatag 38536202  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
     | |||||||||||||||||| |||||||| |||||||||||||| ||||||| ||| | ||||||||| ||||| ||||||||||||  ||  |||||     
T  38536203 ggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccttttttcaaggtaaaacagttcggattatataatctaaattgtatct 38536302  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg-ttttgggtcattgttacttgt 372  Q
    |||||||| |||||        ||||||| |||| ||||||| ||||||||||||| ||  ||||||| ||  || || |||| |||||||||||| |||    
T  38536303 gcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcattattctgtttttaggtcattgttacatgt 38536402  T
Q  373 tcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagg 472  Q
    |||||||||||||||  |||||| |||||||||||||||||| ||  |||||| |||                |||||||||||| ||||| |||||| |    
T  38536403 tcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactttcccagaaaatcagaaaaaattcaaggaccataactcctttagaaag 38536502  T
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  38536503 gacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagaccca 38536556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 88 - 428
Target Start/End: Complemental strand, 55052858 - 55052498
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaacttcaaaa 177  Q
    |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| ||||           |||||||||||||||||||    
T  55052858 gtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgtaatccggaaacttcaaaa 55052759  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacag 276  Q
    ||||| | |||||| ||||||||||||||||| || |||||||||||||| ||||||||||| | ||||||||| |||||  ||||||||||||||||      
T  55052758 aatagggcgtgttagatgatgtttccggattatataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcgaattatataatccgaactt 55052659  T
Q  277 tatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatcctt-ttgttttgggtcattgtta 367  Q
    ||||||||||||| |||||        ||||||| |||| ||||||||||||||| ||||| ||  ||||| | ||||||    |||| |||||||||||    
T  55052658 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttccattttttggtcattgtta 55052559  T
Q  368 cttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    | |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  55052558 cctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccc 55052498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 150 - 524
Target Start/End: Complemental strand, 54631630 - 54631276
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggta 247  Q
    |||||||| |||||||||||||||||||| ||  | | ||||||||||||||||||||||||| |||||||||||||| ||||||  ||| || ||||||    
T  54631630 cggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacatttttttcaaggta 54631531  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaataacatgtatagccattttagggacaatattaatatttataactcttatcct 347  Q
    ||| ||||| ||||||| |||| |||| |||||||||||||                      || |||||||||||||||| ||  ||||||| |||||    
T  54631530 aaacagttcggattatacaatctgaactgtatcagcacaaa----------------------ttctagggacaatattaatcttcctaactctcatcct 54631453  T
Q  348 tttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnntt 447  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||                ||    
T  54631452 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccccagaaaatcagaaaaaatt 54631353  T
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||| ||||||||||| |||||||||    
T  54631352 caaggaccatgactcccatagaaaggacttcttacgggactccgcacctcaaaatacaaaattccatcgtttagacc 54631276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 258 - 526
Target Start/End: Complemental strand, 53894083 - 53893808
Alignment:
Q  258 gattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttt 349  Q
    ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||| ||||||| ||||||     
T  53894083 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatccttc 53893984  T
Q  350 tgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttca 449  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||                  |||     
T  53893983 tgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccgagaaaatcagaaaaaatttc- 53893885  T
Q  450 aggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||| |||||| |||||||||||||||| ||| |||| ||||||||||||||||||| ||| |||||||||||    
T  53893884 aggaccatcactcccgtagaagggacttcttatgggtctccgcccctcaaaatccaaaatttcatcgtttagaccca 53893808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 150 - 510
Target Start/End: Original strand, 8106392 - 8106763
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttct-taaggta 247  Q
    |||||||| ||||||| |||||||||||||||| | | | |||||||| |||||| ||||||| ||||| | |||||| ||||||| ||| | || || |    
T  8106392 cggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttctagggaa 8106491  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga-caatattaatatttataac 338  Q
    ||||||||||||||||||||||||||| ||||||||||||||  ||||        ||||||| |||| |||||||| || |||| ||||| ||| ||||    
T  8106492 aaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatctttctaac 8106591  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnn 438  Q
    ||| |||||| ||||||| ||||||||||| |||||||| ||||||||| |||||| ||||||||||||| |||| ||| |||||||||||             
T  8106592 tctcatccttctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttccccaaaaaatca 8106691  T
Q  439 nnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaatt 510  Q
           |||||||| |||||||||| ||||||| ||||||||||||||||| || ||||||||| ||||||    
T  8106692 gaaaaaattcaaggatcatgactcccgtagaaggaacttcttacgggactccgcctctcaaaatcaaaaatt 8106763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 189 - 526
Target Start/End: Complemental strand, 31582550 - 31582212
Alignment:
Q  189 ttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaa 287  Q
    ||||||||||||| | |||||||| |||||||||||||| ||||||||||| | ||||||||| ||||| |||||||||||| |||  ||||||||||||    
T  31582550 ttacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatctgaattgtatcagcacaa 31582451  T
Q  288 atcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagt 379  Q
    || |||||        ||||||| |||| ||||||| | ||||| ||||| ||  ||||||| |||||| ||||||||||||||||||| ||||||||||    
T  31582450 attctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgttacatgttcttagt 31582351  T
Q  380 caaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttct 479  Q
    ||||||||  |||||||||||| ||||||||||||||| ||||||| |||                ||||| |||||||| | |||||||||||||||||    
T  31582350 caaaaatctagttttcgggctaattgatcggattgctccgaaacttgccc-------agaaaaaaattcaaagaccatgatttccttagaagggacttct 31582258  T
Q  480 tacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |   ||| ||| ||||||||||||||||||||||| |||||||||||    
T  31582257 t-ttggattccgcccctcaaaatccaaaattccatcgtttagaccca 31582212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 72 - 295
Target Start/End: Original strand, 23523818 - 23524053
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttat----------aa 161  Q
    ||||||| || ||||| |||| ||||||||||||  |||||| | ||||| ||||||| ||||||||||||||| ||||||||||| |          ||    
T  23523818 caaaaatgcccttgagattttaggatttcataattcggaatgatgttttcctttgttagagggtgaaaaatggagttacggattttttcggattttgtaa 23523917  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccc-tttcttaaggtaaaatagttcaga 259  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||| ||| ||    
T  23523918 tccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccctttttttaaggtaaaataattcgga 23524017  T
Q  260 ttatataatccgaacagtatcagcacaaatcctaaa 295  Q
    |||||||||||  || ||||||||||||||||||||    
T  23524018 ttatataatccacactgtatcagcacaaatcctaaa 23524053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 93 - 295
Target Start/End: Original strand, 29822553 - 29822765
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatag 182  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| ||||||          ||||| |||||||||||||||||||||||     
T  29822553 cggatttcataatatggaatggtgtttcc-tttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatac 29822651  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaacccc-caaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
    || | |||||||||||||| |||||||||| |||||||||||||  ||||||||| | | ||||||||| | ||| ||||||||||||||||| ||||||    
T  29822652 agcgcgttacatgatgttttcggattacataatccggaaaccccataaacaccctctttcaaggtaaaacaattcggattatataatccgaactgtatca 29822751  T
Q  282 gcacaaatcctaaa 295  Q
    |||||||| |||||    
T  29822752 gcacaaattctaaa 29822765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 296 - 523
Target Start/End: Complemental strand, 25538991 - 25538763
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtcattgttacttgttcttagtcaaaaatcgggtttt 394  Q
    ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||  ||||| ||||||||||||| | |||||||||||||||  ||||||    
T  25538991 taacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgttacctcttcttagtcaaaaatttggtttt 25538892  T
Q  395 cgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccaccc 494  Q
    | ||||||||||| ||||| ||| ||||| |||||                |||||||| ||||||||||||||||| |||||||||||||||||| |||    
T  25538891 caggctacttgattggatttctccgaaacatccccagaaaatcagaaaaatttcaaggaacatgactcccttagaagagacttcttacgggactccgccc 25538792  T
Q  495 ctcaaaatccaaaattccattgtttagac 523  Q
    ||||||||||||||| |||| ||||||||    
T  25538791 ctcaaaatccaaaataccatcgtttagac 25538763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 336 - 523
Target Start/End: Original strand, 29822775 - 29822962
Alignment:
Q  336 aactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnn 435  Q
    |||||| |||||| ||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||  |||||| |||          
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttgcccagacaa 29822874  T
Q  436 nnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
              ||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||| ||||||||||| ||||||||    
T  29822875 tcagaaaaaattcaaggaccatgactcccgtagaagggacttcctacgggactctgcccctcaaaattcaaaattccatcgtttagac 29822962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 310 - 522
Target Start/End: Complemental strand, 27742112 - 27741899
Alignment:
Q  310 attttaggga-caatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    |||||||||| |||||||||| ||  ||||||| |||||| ||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| |||    
T  27742112 attttagggaacaatattaatcttcctaactctcatccttctgttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatc 27742013  T
Q  409 ggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaa 508  Q
    ||||||||| ||||| |||||                ||  |||| |||| ||||| ||||||| |||||||| |||||||| |||||||||||||||||    
T  27742012 ggattgctccgaaacatcccccgaaaatcagaaaaaattggaggatcatgcctcccgtagaaggaacttcttatgggactccgcccctcaaaatccaaaa 27741913  T
Q  509 ttccattgtttaga 522  Q
    ||||||||||||||    
T  27741912 ttccattgtttaga 27741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 497
Target Start/End: Original strand, 52089340 - 52089541
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| |||||| |||||||||||||| ||  ||||| | || ||| || |||||||||||||||| |||||||||||||||||||||||||     
T  52089340 taacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacctgttcttagtcaaaaatcgggttttt 52089439  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    || ||||||||||||||||||   ||||||||||                |||||||||||| |||| | ||||||||||||||||||||||||| ||||    
T  52089440 ggactacttgatcggattgcttcaaaacttccccagaaaatcagaaaaaattcaaggaccataactctcatagaagggacttcttacgggactccgcccc 52089539  T
Q  496 tc 497  Q
    ||    
T  52089540 tc 52089541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 25539187 - 25539038
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaa 177  Q
    |||| |||||||||||||| |||||||| ||||| ||||||||| ||||||||||||| ||||||          ||||| |||||||||||||||||||    
T  25539187 gtttccggatttcataatccggaatggtgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaa 25539088  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc 227  Q
    ||||| |  |||||||||||||||| ||||||||| ||||||||||||||    
T  25539087 aatagggcatgttacatgatgtttctggattacataatccggaaaccccc 25539038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 296 - 429
Target Start/End: Complemental strand, 41323104 - 41322971
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||  ||||||| ||||||||||||| ||  ||||||| ||||||||||||| ||||||||||| ||||||||||| |||||| | ||||||    
T  41323104 taacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttggtcattgttaattgttcttagttaaaaattgagttttc 41323005  T
Q  396 gggctacttgatcggattgctctgaaacttcccc 429  Q
    ||  |||||||||||||||||| |||| ||||||    
T  41323004 ggcatacttgatcggattgctccgaaagttcccc 41322971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 526
Target Start/End: Complemental strand, 3703505 - 3703037
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttat----------aa 161  Q
    ||||||| || |||| |||| |||||||||||||| | | | || ||||| |||||||||||||||||||  || ||||||||||| |          ||    
T  3703505 caaaaatgcccttgaagtttccggatttcataatccgaactagtgttttcctttgttatagggtgaaaaaatgagttacggattttttcggattttgtaa 3703406  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat-agttcaga 259  Q
    |||| ||||||||||||||||   |||||||||||| ||| |||||||||| || || | |||||| ||||||| ||| | |||| ||||  ||||  |     
T  3703405 tccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaacaccatttttcaagggaaaaacagttatgg 3703306  T
Q  260 ttatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg 351  Q
    ||||||||| | ||| |||||||||||||| |||||        ||||||  |||| ||||||||| | ||||||||| || |||||||| |||||| ||    
T  3703305 ttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctcatccttctg 3703206  T
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaag 451  Q
    |||| ||||| |||||| |  | ||||||||||||||| |||||||||||      ||||||||||  ||||||| ||                |||||     
T  3703205 ttttaggtcaatgttacctacttttagtcaaaaatcggattttcgggcta------cggattgctccaaaacttctccaaaaaatcaaaaaaaattcaaa 3703112  T
Q  452 gaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    || ||||||||||||||||  ||||||||| ||||||||  || ||||||||||||||||||| |||| ||||||    
T  3703111 gatcatgactcccttagaaatgacttcttatgggactccgtccttcaaaatccaaaattccatcgtttggaccca 3703037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 369 - 524
Target Start/End: Original strand, 38417020 - 38417174
Alignment:
Q  369 ttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttag 468  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||                ||||||||||||||||| | |||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttccccaaaaaattagaaaaa-ttcaaggaccatgactcacgtag 38417118  T
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||||||| ||||||| ||| ||||||||||||||| ||| |||||||||    
T  38417119 aagggacttcttacaggactccgcccttcaaaatccaaaatttcatcgtttagacc 38417174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 514
Target Start/End: Original strand, 52089559 - 52089627
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccat 514  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52089559 ttcaaggaccataactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccat 52089627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 525
Target Start/End: Complemental strand, 18051050 - 18050972
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||||||| ||||||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  18051050 tcaaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatcgtttagaccc 18050972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 448 - 522
Target Start/End: Complemental strand, 49001415 - 49001341
Alignment:
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||    
T  49001415 caaggatcatgactcccttagaagggacttcttacgggactccgctcctcaaaatccaaaattacatcgtttaga 49001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 429
Target Start/End: Original strand, 47456771 - 47456888
Alignment:
Q  312 tttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcgga 411  Q
    |||| |||| |||||||| ||  ||| ||| |||||| |||||| |||||||||||  | |||||||||||||||  |||||||||||||||||||| ||    
T  47456771 tttaaggaccatattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggttttcgggctacttgatcaga 47456870  T
Q  412 ttgctctgaaacttcccc 429  Q
    |||||| |||||||||||    
T  47456871 ttgctccgaaacttcccc 47456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 247 - 422
Target Start/End: Original strand, 7863539 - 7863722
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataac 338  Q
    |||| ||||| |||||||||||| |||| ||||| |||||||| |||||        ||||||| | |  ||||||| ||||||||||||||||  ||||    
T  7863539 aaaacagttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaac 7863638  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaa 422  Q
    | |||||||| |||||| |||||||| ||  |||||||| | ||||||  |||||||||||||||| ||| |||||||| ||||    
T  7863639 ttttatccttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctccgaaa 7863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 446 - 526
Target Start/End: Original strand, 23524092 - 23524172
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||||  ||||||||||| ||| |||||| | ||||||||||||||||||| |||| ||||||||||    
T  23524092 ttcaaggaccatgactcccgaagaagggacttattatgggacttcgcccctcaaaatccaaaatttcattatttagaccca 23524172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 422
Target Start/End: Complemental strand, 49001516 - 49001446
Alignment:
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaa 422  Q
    ||||||||||||||||  ||||| |||||||||||| | ||||||||||||||||||||||||||| ||||    
T  49001516 ttttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctccgaaa 49001446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 526
Target Start/End: Complemental strand, 14474055 - 14473997
Alignment:
Q  468 gaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||    
T  14474055 gaagggacttcttacgggactccgcccctcaagatccaaaatttcatcgtttagaccca 14473997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 14474201 - 14474095
Alignment:
Q  319 acaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctct 418  Q
    ||||||||||| ||  |||| || |||||| | |||| |||||||||||| |||||||  |||||||||  ||||||  ||||||||||||||||||||     
T  14474201 acaatattaatcttcctaaccctcatccttctattttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctcc 14474102  T
Q  419 gaaactt 425  Q
    |||||||    
T  14474101 gaaactt 14474095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 525
Target Start/End: Original strand, 37222286 - 37222348
Alignment:
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||||||||  ||||||||||    
T  37222286 ccttagaaggaacttcttacgagactcctcccctcaaaatccaaaattccaacgtttagaccc 37222348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 20078719 - 20078832
Alignment:
Q  312 tttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcgga 411  Q
    |||| |||| |||||||||||  || |||  |||||| |||||| ||||||||||| |  ||||||||  |||||| |||||| |||||||||||||  |    
T  20078719 tttaaggaccatattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaa 20078818  T
Q  412 ttgctctgaaactt 425  Q
    ||||||||||||||    
T  20078819 ttgctctgaaactt 20078832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 5803270 - 5803210
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||||||||||    
T  5803270 tagaaggaacttcttatgggactccaccccacaaaattcaaaattccatcgtttagaccca 5803210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 252 - 385
Target Start/End: Original strand, 27879651 - 27879792
Alignment:
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    |||||||||||||||||| |||| |||||||||||||| || ||        ||||||| || | ||||||| |||| |||||||||||  ||||||| |    
T  27879651 agttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctca 27879750  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaa 385  Q
    |  ||||||||| | ||||||||| |||||| ||||||||||    
T  27879751 taattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 448 - 524
Target Start/End: Complemental strand, 42497795 - 42497719
Alignment:
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||| || ||||||| | |||||| |||||||| ||||||| |||||||||||| |||||| |||||||||||||    
T  42497795 caaggatcaagactcccatggaaggggcttcttacaggactccgcccctcaaaatctaaaatttcattgtttagacc 42497719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 48095825 - 48095746
Alignment:
Q  350 tgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||||| ||||||||||| || || ||||||||||||| |||||||||||||||| |||  ||||||  |||||||||||    
T  48095825 tgttttaggtcattgttagttatttttagtcaaaaatctggttttcgggctactttatcatattgcttcgaaacttcccc 48095746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 55838965 - 55838875
Alignment:
Q  335 taactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    ||||||| |||||| |||||| ||||||||||| ||||||  |||| |||||  |||||||||||||||| | | ||||||||| ||||||    
T  55838965 taactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctaaaactt 55838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 425
Target Start/End: Original strand, 37222116 - 37222244
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| ||| |||| |||| ||||||||  || | | ||| ||| || |||||||||||||||||| ||||||||||| ||||||  |||| ||    
T  37222116 taacatggataaccactttaaggaccatattaattcttcttaatctcatcattctgttttgggtcattgttagttgttcttagtaaaaaattcggttctc 37222215  T
Q  396 gggctacttgatcggattgctctgaaactt 425  Q
    ||| ||| ||||| |||||||| |||||||    
T  37222216 ggggtac-tgatcagattgctccgaaactt 37222244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 397
Target Start/End: Complemental strand, 46381180 - 46381079
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| ||| |||| |||| |||||||| || |||||||| || |||  ||||| | ||||||||| || |||||||||||||||| |||||||    
T  46381180 taacatggataaccagtttaaggaccatattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T
Q  396 gg 397  Q
    ||    
T  46381080 gg 46381079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 47873964 - 47874037
Alignment:
Q  295 ataacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttac 368  Q
    |||||||| |||| ||||||||||||||||||||| ||  ||| ||| |||||| |||||||| ||||||||||    
T  47873964 ataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 372238 - 372306
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||| ||||||  ||| ||||| |||||    
T  372238 gacttccttataagggacttcttacgggactcctcccctcaaaattcaaaatatcatcgtttaaaccca 372306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 413
Target Start/End: Original strand, 1788175 - 1788269
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagt---caaaaatcgggttttcgggctacttgatcggatt 413  Q
    |||||||| || |||||||| || ||| |||||| |||||||||||||||||||||||    |||||||  ||||||||| ||||||||| ||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaaaaatctagttttcgggatacttgatcagatt 1788269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 526
Target Start/End: Complemental strand, 4936572 - 4936504
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||  |||||||| ||||||||  |||||||||||||||||| |||  ||||||||||    
T  4936572 gactcccttagaagatacttcttatgggactccgtccctcaaaatccaaaatttcatcttttagaccca 4936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 372073 - 372167
Alignment:
Q  295 ataacatgtatagccattttagggacaatattaatattt--ataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatc 387  Q
    |||||||| |||| |||||||  ||| |||||||||||   |||| | | |||||| |||||||||||||||||| || ||||||||||||||||    
T  372073 ataacatggatagtcattttaaagaccatattaatattctcataattttcatccttctgttttgggtcattgttagttcttcttagtcaaaaatc 372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 42660513 - 42660418
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccgga 167  Q
    |||||||||| |||| |||| ||||||| ||||||  |||| || ||||| ||||||| |||||||||||  || ||||||||| | |||||||||    
T  42660513 caaaaatacccttgaagtttccggattttataatccagaatagtgttttcctttgttaaagggtgaaaaaatgagttacggattatgtaatccgga 42660418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 421
Target Start/End: Complemental strand, 55774787 - 55774701
Alignment:
Q  335 taactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    ||||||| |||||| |||||| ||||||| ||| ||||||  |||| |||||  |||||||||||||||| | | ||||||||||||    
T  55774787 taactctaatccttatgttttaggtcattattagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctgaa 55774701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 520
Target Start/End: Original strand, 47456911 - 47456984
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||||| || ||||||  |||||| ||||||||| || |||||  |||||||||||||||||||||| |||||    
T  47456911 tcaaggatcaagactcctctagaagagacttcttatggaactccgtccctcaaaatccaaaattccatcgttta 47456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 526
Target Start/End: Complemental strand, 48629409 - 48629348
Alignment:
Q  465 ttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||| || ||| |||||||||||  ||||||||||  ||||||||||    
T  48629409 ttagaagggacttcttacgagattccgcccctcaaaatttaaaattccatcatttagaccca 48629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 52077012 - 52077101
Alignment:
Q  199 tttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaa 287  Q
    ||||||||| |||| ||||||||||| || ||| ||| ||| | ||||||||| ||||||||||||||||| | ||  ||||||||||||    
T  52077012 tttccggatcacataatccggaaacctcctaaataccatttttcaaggtaaaacagttcagattatataattcaaattgtatcagcacaa 52077101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 20083287 - 20083355
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||| || |||||| |||||||  |||| ||| | ||||||||||||||||||||| |||||||||||    
T  20083287 gactcactgagaaggaacttcttgtgggattccgctcctcaaaatccaaaattccatcgtttagaccca 20083355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 524
Target Start/End: Original strand, 32601169 - 32601221
Alignment:
Q  472 ggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||  |||||||| || |||||||||||||||||||| |||||||||    
T  32601169 ggacttcttgggggactccgccgctcaaaatccaaaattccatcgtttagacc 32601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 41322934 - 41322875
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| |||||||||||||| ||| ||||||||||||| | ||||||| |||||||||||    
T  41322934 tagaagagacttcttacgggattccgcccctcaaaatcc-atattccatcgtttagaccca 41322875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 42497881 - 42497809
Alignment:
Q  303 tatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttct 375  Q
    |||||| | |||| |||| |||||||| ||| ||||||| ||| ||||||||| ||||||||||| |||||||    
T  42497881 tatagctagtttaaggaccatattaatctttctaactctcatcattttgttttaggtcattgttagttgttct 42497809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 48095704 - 48095644
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||| ||||||||| ||  ||||||||| ||||||||| | |||||||||    
T  48095704 tagaagggacttcttgcgggactccgcctttcaaaatccgaaattccatcgattagaccca 48095644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 25140658 - 25140592
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||||| ||||||| ||||| ||| ||  ||||||||||||||||||| ||||| ||||    
T  25140658 gactcccttagaaggaacttcttgcgggattccgcca-tcaaaatccaaaattccatcgtttacaccc 25140592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 520
Target Start/End: Complemental strand, 53836119 - 53836072
Alignment:
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||||||||||||||||  ||||||||||||||||||| || |||||    
T  53836119 gacttcttacgggactccgtccctcaaaatccaaaattctatcgttta 53836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 1748181 - 1748103
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||| || |||| || || || |||||||||  |||||||||||| | |||||||||||||  ||||||||||||    
T  1748181 ttcaaggatcaagacttccctaaaaaggacttcttctgggactccacccattaaaatccaaaattatattgtttagacc 1748103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 1788092 - 1788130
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcac 285  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  1788092 aaaatagttcagattatataatccaaactgtatcagcac 1788130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 38416488 - 38416546
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    |||| ||||||| ||||||||||||| |  ||| ||||| |||||||||||||||||||    
T  38416488 ttgaagttttcgaatttcataatctgaataggtgttttcctttgttatagggtgaaaaa 38416546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 4936675 - 4936619
Alignment:
Q  361 attgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
    |||||||  |||||||||| ||||||| | |||| |||||| |||||||||||||||    
T  4936675 attgttagctgttcttagttaaaaatctgatttttgggctatttgatcggattgctc 4936619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 490
Target Start/End: Complemental strand, 25140865 - 25140833
Alignment:
Q  458 gactcccttagaagggacttcttacgggactcc 490  Q
    |||||||||||||||||||||||||| ||||||    
T  25140865 gactcccttagaagggacttcttacgagactcc 25140833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 525
Target Start/End: Original strand, 47072315 - 47072371
Alignment:
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||| || || | ||| |||||||||||| |||||||||| ||||||||||    
T  47072315 aagggacttcctaaggtattccgcccctcaaaatctaaaattccatcgtttagaccc 47072371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 50392664 - 50392596
Alignment:
Q  73 aaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    |||||| |||||||||||| |||||||  ||||| |||| ||| ||||| ||||||| || ||||||||    
T  50392664 aaaaatgcctttgaggtttccggatttagtaatccggaacggtgttttcctttgttaaagagtgaaaaa 50392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 72 - 526
Target Start/End: Complemental strand, 18583799 - 18583326
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgga----------ttttataa 161  Q
    ||||||| || |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| | |||||||          |||| |||    
T  18583799 caaaaatgcccttgaggttttcggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatgaagttacggacttttccggattttgtaa 18583700  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    || |||||||| ||||||||| | | |||||||||||||| |||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| |||    
T  18583699 tctggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaacacctttttttaaggtaaaatagttcggat 18583600  T
Q  261 tatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgt 352  Q
    ||||||||| |||| ||||| ||||||||||||||        |||||||||||||||||||||||||||||||||| |   ||||||||||||||||||    
T  18583599 tatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatccttttgt 18583500  T
Q  353 tttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaagg 452  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||    
T  18583499 tttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaacaaattcaagg 18583400  T
Q  453 accatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||| ||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18583399 accacgactcccatagaagagacttcttacgggactccgcccctcaaaatccaaaattccattgtttagaccca 18583326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 72 - 526
Target Start/End: Complemental strand, 33611665 - 33611192
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttat----------aa 161  Q
    ||||||| || |||||||||  |||||||||||||  ||||||| ||||  ||||||||||||||||||||||| ||||||||||| |          ||    
T  33611665 caaaaatgcccttgaggtttctggatttcataatccagaatggtgtttttctttgttatagggtgaaaaatggagttacggattttttcggattttgtaa 33611566  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    |  |||||||||||||||||| | | ||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||| |||    
T  33611565 tttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccccctaaacacccttttttaaggtaaaatagttcggat 33611466  T
Q  261 tatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgt 352  Q
    |||||||||||||| ||||||||||||||||||||        |||||||||||||||||||| |||||||||| || ||  ||| ||||||||||||||    
T  33611465 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatccttttgt 33611366  T
Q  353 tttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaagg 452  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||| |||    
T  33611365 tttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcgagg 33611266  T
Q  453 accatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||| ||||| || || |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  33611265 accgtgacttccataaaagggacttcttacgggactacgtccctcaaaatccaaaattccattgtttagaccca 33611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 81 - 518
Target Start/End: Original strand, 49786182 - 49786637
Alignment:
Q  81 ctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaatta----------cggattttataatccggaaac 170  Q
    ||||||||||| |||||||||||||||||||| || ||||| ||| ||||||||||||||||||| |||          ||||||||  |||||| ||||    
T  49786182 ctttgaggtttccggatttcataatctggaattgtgttttcctttattatagggtgaaaaatggagttatggatttttccggattttgcaatccgaaaac 49786281  T
Q  171 ttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaaatagttcagattatataatcc 270  Q
    || |||||||||   | ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  49786282 tttaaaaaataggacgcgttacatgatgtttccggattacataatccggaaacccccaaacacccttttttaagataaaatagttcggattatataatcc 49786381  T
Q  271 gaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcat 362  Q
     ||| ||||||||||||||||||||        |||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||     
T  49786382 taactgtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactcttatccttttgttttgggtcaa 49786481  T
Q  363 tgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactc 462  Q
    |||||| |||| |||||||||||||  |||||||| |||||||||||||||||||||||||||||||                |||||||||||||||||    
T  49786482 tgttacatgtttttagtcaaaaatcaagttttcggcctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactc 49786581  T
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtt 518  Q
    || |||||| ||||||||| | |||||| |||||||||||||||||||||||||||    
T  49786582 ccgtagaagagacttcttatgagactccgcccctcaaaatccaaaattccattgtt 49786637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 72 - 526
Target Start/End: Original strand, 23442642 - 23443115
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttt----------ataa 161  Q
    ||||||| || ||||||||| |||||||||| ||| |||||| | ||||| ||||||||| ||||||||||||| |||||||||||          ||||    
T  23442642 caaaaatgcccttgaggtttccggatttcattatccggaatgatgttttcctttgttataaggtgaaaaatggagttacggatttttccggattttataa 23442741  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    || |||||||||||||||||| | | |||||||||||||||||||||| || || ||||||||||| ||||| | ||| ||||||||||||||||| |||    
T  23442742 tctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaaccccccaaacatctttttttaaggtaaaatagttcggat 23442841  T
Q  261 tatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgt 352  Q
    |||||||||| ||| ||||||||||||||||||||        ||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||    
T  23442842 tatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactcttatccttttgt 23442941  T
Q  353 tttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaagg 452  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||                |||||||    
T  23442942 tttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaagg 23443041  T
Q  453 accatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||| |||||| |||||| |||||||| |  |||||  | |||||||||||||||||| |||||||| |||||    
T  23443042 accataactcccatagaagagacttcttgcacgactctgctcctcaaaatccaaaattctattgtttaaaccca 23443115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 90 - 526
Target Start/End: Complemental strand, 41584907 - 41584447
Alignment:
Q  90 tttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaa 179  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| | ||||||          ||||| ||||||||||| ||||||||     
T  41584907 tttcggatttcataatcaggaatggtgttttcttttgttatagggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaac 41584808  T
Q  180 tagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatcc-----gaa 273  Q
    ||| |  ||||||||||||||| |||||||||| |||||||||||||| ||||| ||||| | ||||||||  ||||| |||||||||||||     |||    
T  41584807 tagggcatgttacatgatgttttcggattacataatccggaaaccccctaaacatcctttttcaaggtaaatcagttcggattatataatccaatccgaa 41584708  T
Q  274 cagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgt 365  Q
    | |||||||||||||| |||||        ||||||| |||| ||||||| ||||||||||||| ||  ||||||| |||||| ||||||||||||||||    
T  41584707 ctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgt 41584608  T
Q  366 tacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactccct 465  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||                |||||||||||||||||||     
T  41584607 tacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactccca 41584508  T
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  41584507 tagaagggacttcttacgggactccgcccctcacaatctaaaattccattgtttagaccca 41584447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 42545959 - 42546344
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||||||||||||||||   | |||||||||||||||||||| |||||||||| |||||||| || |||||||| | |||||||    
T  42545959 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatccgaaaaccccctaagcaccctttttcaaggtaa 42546058  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| |||||||| || |||||||||  || ||||||    
T  42546059 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactc 42546158  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcggg-ttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnn 439  Q
    | |||||| ||||||||||||||||||  |||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||              
T  42546159 tcatccttctgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttccccagaaaatcag 42546258  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
          || |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  42546259 aaaaaatttaaggaccatgactcccttagaaggaacttcttacgggactcc-gccctcaaaatccaaaattccatcgtttagaccca 42546344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 72 - 429
Target Start/End: Complemental strand, 34162976 - 34162600
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg-----------attttata 160  Q
    |||||||||| ||||| ||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| || |||           ||||| ||    
T  34162976 caaaaatacccttgag-tttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttgcgggttttttccggattttgta 34162878  T
Q  161 atccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcaga 259  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||||| ||||||||||| | ||||| ||| |||||  |    
T  34162877 atccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggt-aaacagttcgaa 34162779  T
Q  260 ttatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg 351  Q
    ||||||||||||||| |||||||||||||| |||||        ||||||| |||||||||||||||||||||||||| ||  |||||| |||||||  |    
T  34162778 ttatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaactcctatccttccg 34162679  T
Q  352 -ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
     ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| || |||||| |||||||||||    
T  34162678 tttttgggtcattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttcccc 34162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 150 - 522
Target Start/End: Complemental strand, 45047017 - 45046636
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggta 247  Q
    |||||||| ||||||| ||||||||||||| || |    |||||||||||||||| ||||||| |||||||||||||| ||||||||  | || || |||    
T  45047017 cggattttgtaatccgaaaacttcaaaaaagagggcca-ttacatgatgtttccgaattacataatccggaaaccccctaaacacccccttttcaatgta 45046919  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataact 339  Q
    ||||||||| |||| |||||||||||| |||||||||||||| |||||        ||||||| |||| ||||| ||||||||||||||| ||  |||||    
T  45046918 aaatagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaact 45046819  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnn 439  Q
    || |||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| |||              
T  45046818 ctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaacttgcccaaaaaatcag 45046719  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
          |||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||    
T  45046718 aaaaaattcaaggaccatgactcccttagaagggacttcttatgagactccgcccctcaaaatccaaaattccatcgtttaga 45046636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 101 - 429
Target Start/End: Original strand, 49677426 - 49677763
Alignment:
Q  101 ataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtt 200  Q
    |||||| |||||||| ||||| ||||||| |||||||||||  || | ||| ||||| ||||| |||||||||||||||||| | | |||||||||||||    
T  49677426 ataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtt 49677525  T
Q  201 tccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaa----- 294  Q
    |||||||||||| |||| ||||||||| |||||||| || | ||||||||| ||||| ||||||||||||||||| ||||||||| |||| ||||         
T  49677526 tccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaacagttcggattatataatccgaactgtatcagcataaattctaaccatg 49677625  T
Q  295 ---ataacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggt 391  Q
        ||||||  |||| ||||||||||||||||||||| ||  ||||||| || ||| ||||||||||||||||||| |||||||||| |||||||||||    
T  49677626 tttgtaacatagatagtcattttagggacaatattaatcttcctaactctcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggt 49677725  T
Q  392 tttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||| | ||||||||||||||||||| |||||||||||    
T  49677726 tttcagcctacttgatcggattgctccgaaacttcccc 49677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 72 - 295
Target Start/End: Original strand, 32542310 - 32542531
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaact 171  Q
    ||||||| || ||||||||| |||||||||||||| |||||||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||||| ||    
T  32542310 caaaaatgccattgaggtttccggatttcataatccggaatggtgttttcctttgttgtagggtgaaaaatggagttacggattttgtaatccggaatct 32542409  T
Q  172 tcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatcc 270  Q
    ||||||||||| ||| |||||||||||||| |||||||||| |||| ||||||||| |||||||||   ||||||||||||||||| |||||||||||||    
T  32542410 tcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacaccct---ttaaggtaaaatagttcggattatataatcc 32542506  T
Q  271 gaacagtatcagcacaaatcctaaa 295  Q
    |||| ||||||||||||||||||||    
T  32542507 gaactgtatcagcacaaatcctaaa 32542531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 169 - 526
Target Start/End: Original strand, 38885239 - 38885590
Alignment:
Q  169 acttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataa 267  Q
    |||| |||||| || | ||||||||||||||||| | ||||||| |||||||||||||  ||||||||||| | ||||||||| | ||| ||||||||||    
T  38885239 acttaaaaaaagagggcgtgttacatgatgtttcag-attacataatccggaaaccccttaaacaccctttttcaaggtaaaacatttcggattatataa 38885337  T
Q  268 tccgaacagtatcagcacaaatcctaaataacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgtta 367  Q
    ||||||| |||||||||||||| |||||   ||||| |   ||||||| ||||||||||||| ||  ||||||| |||||| ||||||||||||||||||    
T  38885338 tccgaactgtatcagcacaaattctaaa---catgtgt---cattttaaggacaatattaattttcctaactctcatccttctgttttgggtcattgtta 38885431  T
Q  368 cttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactccctta 467  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||                |||||| ||||| |||| | |     
T  38885432 cttgttcttagttaaaaattgggttttcgggctacttgatcggattgctccgaaactttcccaaaaaataaaaaaaaattcaagcaccataactctcctg 38885531  T
Q  468 gaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||    
T  38885532 gaagggacttcttatgggactccgcccctcaaaattcaaaattccatcgtttagaccca 38885590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 150 - 417
Target Start/End: Complemental strand, 15070009 - 15069732
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc--aaacaccctttcttaaggta 247  Q
    |||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||| || ||||||||||||||  ||||||| ||| | ||| ||    
T  15070009 cggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatccggaaacccccctaaacaccatttttcaagata 15069910  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataact 339  Q
    ||| ||||||||||||||||||||||| ||||||||||||||  ||||        ||||||| |||| |||||||| |||||||||||| ||  |||||    
T  15069909 aaacagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaact 15069810  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
     | |||||| |||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  15069809 ttcatccttctgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgctc 15069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 160 - 526
Target Start/End: Complemental strand, 40908091 - 40907716
Alignment:
Q  160 aatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggtaaaatagttca 257  Q
    ||||||||||||||||||||| | | ||| |||||||||||| |||||||||| ||||| |||||||| ||||||||||| || ||||||||| |||||     
T  40908091 aatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttttaaggtaaaacagttcg 40907992  T
Q  258 gattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttt 349  Q
    ||||||||| || |||| |||||||||||||| |||||        ||||||| |||  |||||||| |||||||||||| ||  ||||||  ||| ||     
T  40907991 gattatata-tctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaactcccatctttc 40907893  T
Q  350 tgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttca 449  Q
    || |||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||                ||||    
T  40907892 tgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattca 40907793  T
Q  450 aggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||| |||||||| | || ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  40907792 aggatcatgactctcataaaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagaccca 40907716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 88 - 429
Target Start/End: Original strand, 17000299 - 17000659
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg---------attttataatccggaaacttcaaaaa 178  Q
    |||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| ||||||         ||||| |||| ||||||| ||||| |    
T  17000299 gttttcggatttcataatccagaatggtgttttcctttgttatagggtgaaaaatggagttacggtttttccggattttgtaattcggaaacatcaaata 17000398  T
Q  179 atagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagt 277  Q
    |||| |   |||| |||||||||| ||||||||| |||||||||||||| ||||||| ||| | ||||||||| ||||   ||||||||||| || | ||    
T  17000399 atagggcacgttagatgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagtttgaattatataatctgagctgt 17000498  T
Q  278 atcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtcattgttac 368  Q
    |||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||  ||||| |||||||||||||    
T  17000499 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattgttac 17000598  T
Q  369 ttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
     |||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||||    
T  17000599 ctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttcccc 17000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 151 - 526
Target Start/End: Original strand, 7011202 - 7011588
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaata-gagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    ||||||| ||||||||||||||||||||| | | | | ||||||||||||||||| || |  | ||||| |||||||| ||||| | ||| | |||||||    
T  7011202 ggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaatccgaaaaccccctaaacatcatttttcaaggtaa 7011301  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||||||| ||||||||||||||||| ||||||||| |||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||    
T  7011302 aatagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactc 7011401  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||               
T  7011402 tcatccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacatccccagaaaatcaga 7011501  T
Q  441 nnnnnttcaaggaccatgactccctt---agaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         |||||||||||||||||||||   |||||  |||||||| |||||||| ||||||  |||||||||||||| ||||||||||||    
T  7011502 aaaaattcaaggaccatgactcccttagaagaagaaacttcttatgggactccgcccctc--aatccaaaattccaatgtttagaccca 7011588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 28866797 - 28866412
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||| ||  ||||||||| | | | |||||||| |||||||||||||| ||| | | |||| | ||||||||||| | |||| ||    
T  28866797 cggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttttaaagggaa 28866699  T
Q  249 aat-agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataact 339  Q
    ||  ||||| |||||||||||| |||| ||||||||||||||  ||||        ||||||| |||||||||||| ||||| | ||||| || ||||||    
T  28866698 aaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatcttcataact 28866599  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnn 439  Q
    || |||||| ||||||||| ||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||              
T  28866598 ctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttccccaaaaaattag 28866499  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
          |||||||||| |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  28866498 aaaaaattcaaggaccgtgactcccttagaaggcacttcctacgggactccgcccctcaaaatccaaaatttcatcgtttagaccca 28866412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 150 - 427
Target Start/End: Complemental strand, 40650842 - 40650556
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccc-caaacaccctttcttaaggtaa 248  Q
    |||| ||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||  ||||||| ||| | |||||||    
T  40650842 cggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaaccccttaaacaccatttttcaaggtaa 40650743  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaa--------ataacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| |||||||| ||| |||| ||||||||||||||  |||         ||||||| |||  ||||||||||||||||||||| ||  ||||||    
T  40650742 aacagttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaactc 40650643  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcc 427  Q
    | |||||| |  |||||||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||||| |||||||||    
T  40650642 tcatccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaacttcc 40650556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 150 - 523
Target Start/End: Complemental strand, 44573263 - 44572885
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaa-cccccaaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | |||||||||||||| |||||||||| ||||||||| |||  |||| || ||| | |||||||    
T  44573263 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaatcccttaaactccttttttcaaggtaa 44573164  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||||||| |||||||||||| |||| |||| |||||||||  ||||        ||||||| |||| ||||||||||||||||||||| ||| ||||||    
T  44573163 aatagttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagtcattttagggacaatattaatctttctaactc 44573065  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||||| |||||||||||||||||||||||||| |     ||  |||| |||||||| |||||||| |||||||||||               
T  44573064 tcatccttctgttttggatcattgttacttgttcttagtcaaaatt---acttaggggcaacttgatcagattgctccgaaacttccccataaaatcaga 44572968  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
         ||||||||||||||||||| |||||| ||||||||| |||||||| ||| ||||||| |||||||| || ||||||||    
T  44572967 aaaaattcaaggaccatgactcccatagaagagacttcttaggggactccgcccatcaaaattcaaaattctatcgtttagac 44572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 150 - 510
Target Start/End: Original strand, 34006251 - 34006622
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||| |||||||||||| | | | |||||||| |||||||||||||| ||  | | |||||  ||||||||||| | |||| ||    
T  34006251 cggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaagggaa 34006350  T
Q  249 aat-agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga-caatattaatatttataac 338  Q
    ||  ||||||||||||||||||| ||  |||| |||||||||  ||||        ||||||| |||| ||||||||||| |||||||||| ||  ||||    
T  34006351 aaacagttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaac 34006450  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnn 438  Q
    ||| |||||| | ||||| ||||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||             
T  34006451 tctcatccttctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatca 34006550  T
Q  439 nnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaatt 510  Q
           |||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  34006551 gaaaaaattcaaggatcatgactcccgtagaagggacttcttacgggactccgtccctcaaaatccaaaatt 34006622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 229 - 524
Target Start/End: Complemental strand, 52744930 - 52744627
Alignment:
Q  229 aacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggac 320  Q
    |||||| ||| | ||||||||| | ||| ||||| |||||| |||| |||||||||||||| |||||        ||||||| |||| ||||||||| ||    
T  52744930 aacaccttttttcaaggtaaaacaattcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaac 52744831  T
Q  321 aatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctga 420  Q
    || |||||| ||  ||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||    
T  52744830 aacattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccga 52744731  T
Q  421 aacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    |||||||||                ||||||||||||||||| | |||||||||||||||||  ||||||||| |||||||| ||||||| ||| |||||    
T  52744730 aacttccccagaaaatcagaaaaaattcaaggaccatgactctcatagaagggacttcttacaagactccacctctcaaaattcaaaatttcatcgttta 52744631  T
Q  521 gacc 524  Q
    ||||    
T  52744630 gacc 52744627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 152 - 362
Target Start/End: Complemental strand, 32817776 - 32817557
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaa 250  Q
    |||||| |||||||||||||||||||||||| | |  ||||||||||||||| |||||||| ||||| |||||||| ||||||||||| | |||||||||    
T  32817776 gattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccctaaacaccctttttcaaggtaaaa 32817677  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
     ||||| ||||||||||||||||| ||||||||||||||||||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||      
T  32817676 cagttcggattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactccc 32817577  T
Q  343 atccttttgttttgggtcat 362  Q
    |||||| |||||||||||||    
T  32817576 atccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 153 - 429
Target Start/End: Complemental strand, 45568040 - 45567769
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| |||| ||||||||||||||||||| | | | |||||||| |||  ||||||||||||||| |||||||| ||||||||||| | |||||||||     
T  45568040 attttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatccgaaaaccccctaaacaccctttttaaaggtaaaac 45567941  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    |              |||||||| |||||||||||||| |||||        ||| ||| |||| ||||||||||||||||||||| ||| ||||||| |    
T  45567940 a--------------atccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctca 45567855  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  45567854 tccatttgttttgggtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 45567769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 72 - 238
Target Start/End: Complemental strand, 30829710 - 30829544
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaact 171  Q
    ||||||| || |||| |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  30829710 caaaaatgcccttgaagtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatgaagttacggattttgtaatccggaaact 30829611  T
Q  172 tcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacacccttt 238  Q
    ||| ||||||| | | |||||||||||||| |||||||||| ||||| |||||||| |||||||||||    
T  30829610 tca-aaaatagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacacccttt 30829544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 24471548 - 24471392
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatag 182  Q
    ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||||| |||||||    
T  24471548 ttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgcaaaatggagttacggattttgtaatccagaaacttca-aaaatag 24471450  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc--aaacacccttt 238  Q
     | | ||||||||||||||||||||||||| ||||| ||||||||  |||||||||||    
T  24471449 ggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacacccttt 24471392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 230 - 525
Target Start/End: Original strand, 27794904 - 27795206
Alignment:
Q  230 acaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggaca 321  Q
    ||||||||| | |||| ||||||||||  ||||||||||| |||| |||||||| |||||  ||||        ||||||  |||| ||||||| |||||    
T  27794904 acaccctttttcaaggaaaaatagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggaca 27795003  T
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  ||||| | ||| || ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||    
T  27795004 atattaatcttcctaactatcatc-ttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaa 27795102  T
Q  422 acttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttag 521  Q
    |||||| |                |||||||| ||||||||   |||||| |||||||||| ||||||| ||||||||||||||||||| ||| ||||||    
T  27795103 acttccacagaaaatcagaaaaaattcaaggatcatgactcttgtagaagagacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttag 27795202  T
Q  522 accc 525  Q
    ||||    
T  27795203 accc 27795206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 296 - 522
Target Start/End: Complemental strand, 6223758 - 6223539
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| ||||||||||||||||     |||  ||||| | || ||| |||||| |||||||||||| ||||||||||||||||||||||||||    
T  6223758 taacatggatagtcattttagggacaata-----attcctaactatcattcttctgttttaggtcattgttacatgttcttagtcaaaaatcgggttttc 6223664  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    |||||||||||||||||||||||||||||| |||                |||||||| ||||||||||||||||| |||||||||| |||| || ||||    
T  6223663 gggctacttgatcggattgctctgaaactttccc-agaaaatcagaaaaattcaaggatcatgactcccttagaagagacttcttac-ggacaccgcccc 6223566  T
Q  496 tcaaaatccaaaattccattgtttaga 522  Q
    ||||||||||||||||||| |||||||    
T  6223565 tcaaaatccaaaattccatcgtttaga 6223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 304 - 428
Target Start/End: Complemental strand, 25563418 - 25563294
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||| ||||||||||||  || ||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||| | | |||| ||||||    
T  25563418 atagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaatccgatattcgagctact 25563319  T
Q  404 tgatcggattgctctgaaacttccc 428  Q
    |||||||||||||| ||||||||||    
T  25563318 tgatcggattgctccgaaacttccc 25563294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 151 - 429
Target Start/End: Complemental strand, 26723649 - 26723367
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaa 249  Q
    ||||||| |||||||||||||||||||||||| | | | |||||||| ||||||     ||| ||||| | |||||| ||||||||||| |||||| |||    
T  26723649 ggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttttttaagggaaa 26723556  T
Q  250 atag-ttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga-caatattaatatttataact 339  Q
    |  | ||| |||||||||||||||||  |||||||||||||   |||        ||||||| |||| ||||||||||| |||||||||| ||  | |||    
T  26723555 aacggttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatg-atagtcattttagggaacaatattaatcttccttact 26723457  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    || ||| || | ||||| ||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||| |||||||||||    
T  26723456 ctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttcccc 26723367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 295 - 425
Target Start/End: Original strand, 42929030 - 42929160
Alignment:
Q  295 ataacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggtttt 394  Q
    ||||||||||| ||||||||| |||| |||||||| ||  ||||||| || ||| |||||| | ||||||||| ||||||| ||||||||||| ||||||    
T  42929030 ataacatgtattgccattttaaggaccatattaattttcttaactctcattcttatgttttagatcattgttagttgttctcagtcaaaaatctggtttt 42929129  T
Q  395 cgggctacttgatcggattgctctgaaactt 425  Q
    || ||||||||||| |||||||| |||||||    
T  42929130 cgagctacttgatcagattgctccgaaactt 42929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 296 - 526
Target Start/End: Complemental strand, 24472839 - 24472610
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| ||||||| ||| ||||||||  ||  ||||| | || ||| |||||| |||||||||||  |||||||||||||||||||  |||      
T  24472839 taacatggatagtcattttaaggaaaatattaagcttcctaactatcattcttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgt 24472740  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    |||| ||||||| ||||||||| |||||||||||                | |||||| || ||||||| ||||||||||||||| ||||||||| |||     
T  24472739 gggcaacttgattggattgctccgaaacttccccagaaaatcagaaaaaat-caaggatcaagactcccatagaagggacttcttgcgggactccgccct 24472641  T
Q  496 tcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||| ||| |||||||||||    
T  24472640 tcaaaatccaaaatttcatcgtttagaccca 24472610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 41584423 - 41584363
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  41584423 tagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagaccca 41584363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 3561333 - 3561218
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcg 409  Q
    |||||| ||||| ||||||| ||| ||||||| ||| || |||||| ||||||||||| ||||||||||||||||||| | | || ||| |||||||||     
T  3561333 attttaaggacagtattaatctttctaactctcatcattctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatca 3561234  T
Q  410 gattgctctgaaactt 425  Q
    |||||||| |||||||    
T  3561233 gattgctccgaaactt 3561218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 800742 - 800677
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||||||    
T  800742 gactcccttagaagggacttcttacgggact-ctgccctcaaaatccaaaattccatcgtttagacc 800677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 9446038 - 9445972
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||| ||||||||||    
T  9446038 gactcccttagaagggatttcttacgggactcc-gccctcaaaatccaaaatttcatcgtttagaccc 9445972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 49677783 - 49677837
Alignment:
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  49677783 aagggacttcttacgggactccgcccctcaaaattcaaaattccatcgtttagac 49677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 8704360 - 8704307
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttt 519  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  8704360 tagaagggacttcttacgggactacacccctcaaaatccaaaatttcatcgttt 8704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 43319134 - 43319079
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccat 514  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  43319134 gacttccttagaagagacttcttacgggactcc-gccctcaaaatccaaaattccat 43319079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 526
Target Start/End: Complemental strand, 40650529 - 40650486
Alignment:
Q  483 gggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||| ||||||||||||||||||||||| |||||||||||    
T  40650529 gggactccgcccctcaaaatccaaaattccatcgtttagaccca 40650486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 425
Target Start/End: Complemental strand, 45880095 - 45879992
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  ||||| | |||||| |||||| ||||||||||| || || |||||||||||||  ||||| ||| |||||||||  ||||||| |||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctccgaa 45879996  T
Q  422 actt 425  Q
    ||||    
T  45879995 actt 45879992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 890748 - 890793
Alignment:
Q  372 ttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||    
T  890748 ttcttagtcaaaaatctggttttcgggttacttgatcagattgctc 890793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 27794759 - 27794828
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||||| || ||||  |||||||||||||||||| | | |||| ||||| |||||||||||||||||||    
T  27794759 caaaaatgcccttgaaattttcggatttcataatccgaactggtgttttcctttgttatagggtgaaaaa 27794828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 522
Target Start/End: Original strand, 44037189 - 44037237
Alignment:
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||||||| ||| ||||||||||||||| |||||||||| |||||||    
T  44037189 acttcttacgagacaccacccctcaaaatctaaaattccatcgtttaga 44037237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 281
Target Start/End: Complemental strand, 8704587 - 8704553
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatca 281  Q
    |||||||||||||||||||||||||||| ||||||    
T  8704587 aaaatagttcagattatataatccgaactgtatca 8704553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 523
Target Start/End: Original strand, 38131185 - 38131259
Alignment:
Q  449 aaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    ||||| || ||||||| || || | ||||||| ||||||||  ||||||||||||||||| ||||| ||||||||    
T  38131185 aaggatcaagactcccctaaaatgaacttctttcgggactctgcccctcaaaatccaaaactccatcgtttagac 38131259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 523
Target Start/End: Complemental strand, 43318920 - 43318859
Alignment:
Q  461 tcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    ||||||||||| |||||||||||||||| |  |||||||||||||||||| |||  |||||||    
T  43318920 tcccttagaagagacttcttacgggact-ctgccctcaaaatccaaaatttcatcatttagac 43318859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 38950185 - 38950242
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgtta 129  Q
    |||||||  ||||||||||| ||||||| |||||  |||||||||||||| |||||||    
T  38950185 caaaaatgtctttgaggtttccggattttataattcggaatggtattttcctttgtta 38950242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 43319363 - 43319286
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc 227  Q
    |||||||| |||||||||||  | ||||||||  | | |||||||||| ||| |||||||||| ||||| ||||||||    
T  43319363 cggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcggattacataatccgaaaaccccc 43319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 6223972 - 6223908
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttt 157  Q
    |||||||||||||| | | | || ||||| |||||||||||||||||||  || |||||||||||    
T  6223972 cggatttcataatccgaactcgtgttttcctttgttatagggtgaaaaaatgagttacggatttt 6223908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 521
Target Start/End: Original strand, 26230352 - 26230412
Alignment:
Q  461 tcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttag 521  Q
    |||| |||||||||||||||| |||||||   ||||||||||| |||||| ||| ||||||    
T  26230352 tcccatagaagggacttcttatgggactctgtccctcaaaatctaaaatttcatcgtttag 26230412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 510
Target Start/End: Complemental strand, 27400123 - 27400079
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaatt 510  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  27400123 tagaaggaacttcttacaggactccgcccctcaaaatcgaaaatt 27400079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 32542879 - 32542839
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaat 112  Q
    |||||||||| ||||||||| |||||||||||||| |||||    
T  32542879 caaaaatacccttgaggtttccggatttcataatccggaat 32542839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 44937783 - 44937823
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaat 112  Q
    ||||||| || |||||||||||||||||||||||| |||||    
T  44937783 caaaaatgccgttgaggttttcggatttcataatccggaat 44937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 72 - 526
Target Start/End: Complemental strand, 2358879 - 2358404
Alignment:
Q  72 caaaaatacctttgaggttttc-ggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------ta 160  Q
    ||||||| || ||||||||| | ||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||           ||    
T  2358879 caaaaatgcccttgaggtttcccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggattttcctggattttgta 2358780  T
Q  161 atccggaaacttcaaaaaa-tagagtgtgttacatgatgtttccggattacatgatccggaaaccc-ccaaacaccctttcttaaggtaaaatagttcag 258  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||| |    
T  2358779 atccggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccggaaaccctccaaacacccttttttaaggtaaaatagttcgg 2358680  T
Q  259 attatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatcctttt 350  Q
    |||||||||||||||| ||||||||| ||||||||||        |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  2358679 attatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 2358580  T
Q  351 gttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaa 450  Q
    |||||||||||||||| | | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||                |||||    
T  2358579 gttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgatcgaattgctctgaaacttccccaaaaaatcagaaaaaattcaa 2358480  T
Q  451 ggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  2358479 ggaccatgactcccctagaagggacttcttacgggactacgcccctcaaaatctaaaattccattgtttagaccca 2358404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 72 - 429
Target Start/End: Original strand, 52777145 - 52777511
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaact 171  Q
    ||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  52777145 caaaaatgcccttgaggttttcggatttcataatctggaatggtgttttcctttgttataggatgaaaaatggagttacggattttgtaatccggaaact 52777244  T
Q  172 tcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggtaaaatagttcagattatataatc 269  Q
    || ||||||||||    |||||||||||||||||||||||| ||  |||||||||| ||||||||||| || ||||||||| ||||| |||||||||||     
T  52777245 tc-aaaaatagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggtaaaacagttcggattatataatt 52777343  T
Q  270 cgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtca 361  Q
     |||| |||||||||||||| |||||        |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  52777344 tgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaactcttatccttttgttttgggtca 52777443  T
Q  362 ttgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52777444 ttgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 52777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 83 - 526
Target Start/End: Original strand, 47301934 - 47302396
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaatta----------cggattttataatccggaaactt 172  Q
    |||| ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| |||          |||||||| ||||||||||||||    
T  47301934 ttgaagttttcggatttcataattcggaatggtgttttcctttgttatagggtgaaaaatggagttatggatttttccggattttgtaatccggaaactt 47302033  T
Q  173 caaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggtaaaatagttcagattatataatcc 270  Q
     ||||||||  | | ||||||||||||||||||||||||| ||||| ||||| || ||||||||||| || ||||||||||||||| |||||||||||||    
T  47302034 aaaaaaataaggcgcgttacatgatgtttccggattacataatccgaaaacctcctaaacaccctttttttaaggtaaaatagttcggattatataatcc 47302133  T
Q  271 gaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcat 362  Q
    |||| ||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  47302134 gaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagg-acaatattaatattc-taactcttatccttttgttttgggtcat 47302231  T
Q  363 tgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaac-ttccccnnnnnnnnnnnnnnnnttcaaggaccatgact 461  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||                 |||||||| |||||||    
T  47302232 tgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactttcccaaaaaaatcagaaaaaattcaaggatcatgact 47302331  T
Q  462 cccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  47302332 cccatagaagggacttcttacgggactctgcccctcaaaatccaaaattccattgtttagaccca 47302396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 83 - 515
Target Start/End: Complemental strand, 43473193 - 43472761
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatag 182  Q
    ||||||||| || ||||||||||| |||||||| ||||| |||||| | |||||||||||||| |||||||||||          ||||||||||||||     
T  43473193 ttgaggtttccgaatttcataatccggaatggtgttttcctttgtttt-gggtgaaaaatggagttacggattttt---------aacttcaaaaaatat 43473104  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
     |||  |||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||||||  |||||||||||||||| ||||||    
T  43473103 ggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaatagttcgaattatataatccgaactgtatca 43473004  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgtt 373  Q
    ||||||||||||||        |||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||  ||||    
T  43473003 gcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgttttgggtcattgttatctgtt 43472904  T
Q  374 cttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc-nnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagg 472  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||                 ||||||||||||||||||  |||||||    
T  43472903 cttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttccccaaaaaaatcagaaaaaattcaaggaccatgactcctctagaagg 43472804  T
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccatt 515  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  43472803 gacttcttacgggactccgcccctcaaaatccaaaattccatt 43472761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 96 - 524
Target Start/End: Original strand, 50716180 - 50716628
Alignment:
Q  96 atttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatagagt 185  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||          ||||| ||||||| |||||||||||||||| |     
T  50716180 atttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggc 50716279  T
Q  186 gtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagca 284  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||| | ||||||||| | ||| |||||||||||| |||| |||||||||    
T  50716280 gtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaacaattcggattatataatctgaactgtatcagca 50716379  T
Q  285 caaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtcattgttacttgttct 375  Q
    ||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||| ||  ||||| ||||||||||||||||||||    
T  50716380 caaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttct 50716479  T
Q  376 tagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggac 475  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||                 |||||||||||||||||  |||||| |||    
T  50716480 tagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaactcaaggaccatgactcctctagaagagac 50716579  T
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||| ||| |||||||||||||||||||||||  ||||||||    
T  50716580 ttcttacgggattccgcccctcaaaatccaaaattccatcctttagacc 50716628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 96 - 524
Target Start/End: Complemental strand, 50796667 - 50796219
Alignment:
Q  96 atttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatagagt 185  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||          ||||| ||||||| |||||||||||||||| |     
T  50796667 atttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggc 50796568  T
Q  186 gtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagca 284  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||| | ||||||||| | ||| |||||||||||| |||| |||||||||    
T  50796567 gtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaacaattcggattatataatctgaactgtatcagca 50796468  T
Q  285 caaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtcattgttacttgttct 375  Q
    ||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||| ||  ||||| ||||||||||||||||||||    
T  50796467 caaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttct 50796368  T
Q  376 tagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggac 475  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||                 |||||||||||||||||  |||||| |||    
T  50796367 tagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaactcaaggaccatgactcctctagaagagac 50796268  T
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||| ||| |||||||||||||||||||||||  ||||||||    
T  50796267 ttcttacgggattccgcccctcaaaatccaaaattccatcctttagacc 50796219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 93 - 522
Target Start/End: Complemental strand, 3903040 - 3902592
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattac----------ggattttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||| |||| ||||          ||||||| ||||||| ||||||||||||||||    
T  3903040 cggatttcataatccggaatggtgttttcctttgttatagggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatag 3902941  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
    || | ||||||||||||||  ||||||||| |||||||||||||| ||||||||||| | ||||||||| ||||| ||||||||||||||||| ||||||    
T  3902940 agcgcgttacatgatgtttttggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatca 3902841  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgtt 373  Q
    |||||||| |||||        ||||||| ||   ||||||| ||||||||||||| || |||||||| |||||| || |||||||||||||||| ||||    
T  3902840 gcacaaattctaaacatgtttgtaacatggatgatcattttatggacaatattaatcttcataactctcatccttctgctttgggtcattgttacatgtt 3902741  T
Q  374 cttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaaggg 473  Q
    |||||||||||||||||||||| |  |||||||||||||||||| ||||||| |||                ||||||||||||||| |||||||||||     
T  3902740 cttagtcaaaaatcgggttttcagattacttgatcggattgctcggaaacttgcccagaaaatcagaaaaaattcaaggaccatgacacccttagaagga 3902641  T
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    | ||||||||||||||| |||||||||||||||||||| || |||||||    
T  3902640 atttcttacgggactccgcccctcaaaatccaaaattcaatcgtttaga 3902592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 153 - 526
Target Start/End: Complemental strand, 34821507 - 34821125
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||||||||||| ||||||| ||| | ||||||||||    
T  34821507 attttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaaggtaaaat 34821408  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| |||||||||||| |||| |||||||||||||| |||||        ||||||  |||| ||||||| ||||||||||||| ||  ||| | | |    
T  34821407 agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttcctaaatttca 34821308  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnn 443  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||                  
T  34821307 tccttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttccccagaaaatcagaaaa 34821208  T
Q  444 nnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
      ||||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  34821207 aattcaaggaccatgactctcatagaagggacttcttacgggagtccgcccctcaaaatccaaaattccatcgtttagaccca 34821125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 88 - 522
Target Start/End: Original strand, 28872923 - 28873379
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacg----------gattttataatccggaaacttcaaaa 177  Q
    |||||||||||||||||||||||||| | ||||  ||||||||||||||||||||| | |||||          |||||||||||||| ||| |||||||    
T  28872923 gttttcggatttcataatctggaatgatgtttttctttgttatagggtgaaaaatgaagttacgagtttttctggattttataatccgaaaatttcaaaa 28873022  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt--aaggtaaaatagttcagattatataatccgaac 274  Q
    |||||   | ||||||| ||||||||||||||||| ||||   ||||||| ||||||||||| ||  ||||||||| ||||| |||||||||||| ||||    
T  28873023 aataggacgcgttacattatgtttccggattacataatccaacaaccccctaaacacccttttttttaaggtaaaacagttcggattatataatctgaac 28873122  T
Q  275 agtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg-ttttgggtcattgt 365  Q
     |||||||||||||| |||||        ||||||  |||| ||||||||||||||||||||| ||  ||||||| || |||  | |||||||||| |||    
T  28873123 tgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcattcttccgcttttgggtcactgt 28873222  T
Q  366 tacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactccct 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||                |||||||| ||||||||||     
T  28873223 tacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaattagaaaaaattcaaggaacatgactcccc 28873322  T
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  28873323 tagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttaga 28873379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 154 - 526
Target Start/End: Original strand, 35142070 - 35142450
Alignment:
Q  154 ttttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaata 252  Q
    |||| |||||||||||||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||| |    
T  35142070 ttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaaca 35142169  T
Q  253 gttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttat 344  Q
    |||| |||||||||||  |||  |||||||||||||| |||||        ||||||| |||| |||||||  |||||||||||| ||  ||||||| ||    
T  35142170 gttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcat 35142269  T
Q  345 ccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnn 444  Q
    |||| || |||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| |||                   
T  35142270 ccttctgctttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaactt-cccagaaaatcagaaaaa 35142368  T
Q  445 nttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
     ||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||    
T  35142369 attcaaggaccatgactcccgtagaagggacttcttacggggctccgcccctaaaaatccaaaattccatcgtttagaccca 35142450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 46622952 - 46622577
Alignment:
Q  150 cggattttataat-ccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggta 247  Q
    ||||||||||||  ||||||||||||||||||||     ||||||||||||||||||||||||| ||| |||||||||| ||||||| ||| | || |||    
T  46622952 cggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaaccccctaaacaccatttttcaaagta 46622853  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaataacatgtatagccattttagggacaatattaatatttataactcttatcct 347  Q
    ||| ||||| ||||||||||||||||| |||||||||||||| |||||   |||| |||| ||||||||||||||||||||| ||  | ||||| || ||    
T  46622852 aaacagttcggattatataatccgaactgtatcagcacaaattctaaa---catggatagtcattttagggacaatattaatcttccttactctcattct 46622756  T
Q  348 tttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnntt 447  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||                ||    
T  46622755 tctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaatt 46622656  T
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||| |||||| |||||   | ||||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  46622655 caaggaccatcactcccatagaatcaatttcttacgggactccgcccctcagaatccaaaattccatcgtttagaccca 46622577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 153 - 522
Target Start/End: Complemental strand, 3352230 - 3351852
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| ||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||| | |||||||||     
T  3352230 attttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataattcggaaaccccctaaacaccctttatcaaggtaaaac 3352131  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    |||||  ||||||||||| |||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| |    
T  3352130 agttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 3352031  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnn 443  Q
    | ||| |||||||||||||||||||  ||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||||||                   
T  3352030 ttcttctgttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccctagaaaatcagaaaa 3351931  T
Q  444 nnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
      |||| |||| ||||||||| |||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||    
T  3351930 aattcagggacaatgactcccgtagaagggacttcttatgggactccgcccctcaaaatctaaaattccatcgtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 152 - 519
Target Start/End: Complemental strand, 38977913 - 38977537
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaa 250  Q
    |||||| |||||||||||||||||||||||| | | |||||||| |||||  ||||||||| ||||| |||||||| ||||||| ||| | |||||||||    
T  38977913 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatccgaaaaccccctaaacaccttttttcaaggtaaaa 38977814  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
     |||||| |||||||||||||||| ||||||||||||||  ||||        ||||||| |||| ||||||| ||||||||||||| ||  |||||||     
T  38977813 cagttcaaattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctc 38977714  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    |||||| ||||||||||||||||||| ||| |||||| ||||| || ||||||| ||||||||||||||||||||  ||||||||||                 
T  38977713 atccttctgttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttgatcggattgctccaaaacttccccagaaaataagaaa 38977614  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttt 519  Q
       |||||||||| |||||||| |||||||||||||||  |||||||| ||||||||||||||||||| ||| ||||    
T  38977613 aaattcaaggaccgtgactcccgtagaagggacttcttgtgggactccgcccctcaaaatccaaaatttcatcgttt 38977537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 152 - 526
Target Start/End: Complemental strand, 47740097 - 47739716
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaa 250  Q
    |||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  47740097 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 47739998  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
    | |||  |||||||||||| |||| |||||||||||||| |||||        ||||||  |||| ||||| ||||||||||||||| || ||||||||     
T  47739997 ttgttttgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctc 47739898  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    |||||| |||||| ||||||| |||| || | ||||| |||||| ||||||||||||||||||||||||||||||  ||||||||||                 
T  47739897 atccttctgtttt-ggtcattattacctggttttagttaaaaattgggttttcgggctacttgatcggattgctccaaaacttccccagaaaattagaaa 47739799  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
       |||||| ||| |||||||| |||||| ||||||||  |||||||| ||||||||||| |||||||||  ||||||||||||    
T  47739798 aaattcaagaaccgtgactcccatagaagagacttctttggggactccgcccctcaaaattcaaaattcc-gtgtttagaccca 47739716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 39149802 - 39150179
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||| |||||| |||||||||| | | |||||||  |||||||||||||||| |||||||||||||| ||||||| ||| | |||||||    
T  39149802 cggattttgtaatccagaaact-caaaaaatagggcgcgttacatagtgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 39149900  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| | |||||||||||||||  |||||||||||||  ||||        ||||||   ||| |||||||| |||||||||||| ||  ||||||    
T  39149901 aacagttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaactc 39150000  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||||||               
T  39150001 tcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttccccagaaaatcaga 39150100  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         |||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||    
T  39150101 aaaaattcaaggaccatgacttccttagaagggacttcttacggg-------ccctcaaaatccaaaattccatcgtttagaccca 39150179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 51258394 - 51258781
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||  ||| |||||||||||| | | ||||||| || ||| |||||||||| ||||| | |||||| ||||||| ||| | |||| ||    
T  51258394 cggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatccgaacaccccctaaacaccatttttcaagggaa 51258493  T
Q  249 aat-agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga-caatattaatatttataac 338  Q
    ||  | ||   |||||||||||||||| ||||||||||||||  ||||        ||||||| |||| ||||||||||| |||||||||| || |||||    
T  51258494 aaacaatttgaattatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataac 51258593  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnn 438  Q
    ||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||| |||             
T  51258594 tctcatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctccgaaactttcccagaaaatca 51258693  T
Q  439 nnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
           |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  51258694 gaaaaaattcaaggatcatgactcccgtagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagaccca 51258781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 90 - 417
Target Start/End: Complemental strand, 501378 - 501032
Alignment:
Q  90 tttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaatta----------cggattttataatccggaaacttcaaaaaa 179  Q
    |||||||||||||| ||  ||||||| ||||| |||||||||||| |||||||||| |||          |||||||| ||||||  |||||||||||||    
T  501378 tttcggatttcatattcctgaatggtgttttcctttgttatagggcgaaaaatggagttatgagtttttccggattttgtaatccaaaaacttcaaaaaa 501279  T
Q  180 tagagtgtgttacatgatgtttccggattacatgatccggaaa--cccccaaacaccctttcttaaggtaaaatagttcagattatataatccgaacagt 277  Q
    ||| | | ||||||||||||||||||||| ||| |||||||||  |||| ||||||| ||| | ||||||||| ||||| ||||||||||||||||| ||    
T  501278 tagggcgcgttacatgatgtttccggattgcataatccggaaaaccccctaaacaccttttttcaaggtaaaacagttc-gattatataatccgaactgt 501180  T
Q  278 atcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttact 369  Q
    || ||||||||| |||||        ||| ||| |||| ||||||| ||||||||||||| ||  || |||| |||||| |||||||||||||||||||     
T  501179 ataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttctgttttgggtcattgttaca 501080  T
Q  370 tgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
    |||| ||| |||||||||  ||||||||||||||||||||||||||||    
T  501079 tgtttttattcaaaaatcatgttttcgggctacttgatcggattgctc 501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 151 - 526
Target Start/End: Complemental strand, 51540780 - 51540409
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccc-caaacaccctttcttaaggtaaa 249  Q
    |||||||  ||||||||||||||||||||||| | | ||||||||||||||||| ||||||| |||||||||||||  ||||||| ||| | ||||||||    
T  51540780 ggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaaccccttaaacaccgtttttcaaggtaaa 51540681  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactct 341  Q
    | ||||| |||||||||||| ||| ||||||||||||||| |||||        |||| || |||| ||||||||||||||||||||| ||  |||||||    
T  51540680 acagttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactct 51540581  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnn 441  Q
     |||||| |  ||||||||||||||||  |||||||||||||||||||||||             ||||||||||| |||||||||||                
T  51540580 catccttctcctttgggtcattgttacacgttcttagtcaaaaatcgggttt-------------tcggattgctccgaaacttccccaaaaaatccgaa 51540494  T
Q  442 nnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
        |||||||||||||||||||||||||||||||||| | |||| ||  ||||||||||||||||| ||||| |||||||||||    
T  51540493 aaaattcaaggaccatgactcccttagaagggacttctcatgggattctgcccctcaaaatccaaaactccatcgtttagaccca 51540409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 335 - 526
Target Start/End: Original strand, 3938368 - 3938559
Alignment:
Q  335 taactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnn 434  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||         
T  3938368 taactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaacttccccaaaaa 3938467  T
Q  435 nnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
               |||||||||||||||||||||| |||| |||||||||  |||||| ||||||||||||  ||||| |||||||||||||||    
T  3938468 atcagaaaaaattcaaggaccatgactcccttataaggaacttcttacaagactccgcccctcaaaatcttaaatttcattgtttagaccca 3938559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 152 - 428
Target Start/End: Complemental strand, 30721974 - 30721690
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtg---tgttacatgatgtttccggattacatgatccggaaaccccc--aaacaccctttcttaaggt 246  Q
    |||||| ||||||| |||||||||||||||| | |   | ||||||||| ||| |||||||||| ||||| | || |||  ||||||| ||| | ||||     
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaaggg 30721875  T
Q  247 aaaa-tagttcagattatataatccgaacagtatcagcacaaatcctaaataacat-gtatagc-cattttagggacaatattaatatttataactctta 343  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |   | |||   | ||||||||||||||||||||| ||  |||||||||    
T  30721874 aaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaactctcattttagggacaatattaatcttcctaactctta 30721775  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    ||||| ||||||||||||||| |||  ||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  30721774 tccttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaacttccc 30721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 296 - 526
Target Start/End: Complemental strand, 35345921 - 35345691
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| ||||||| ||||||||||||||||| ||||||| |||||||||||||  |||||||||| |||||||||||||||||| ||||||||    
T  35345921 taacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaattgggttttc 35345822  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    ||| || ||||||||||||||| |||||||||||                 ||||| | || ||||| | |||||||||||||| |||||||||| ||||    
T  35345821 gggttaattgatcggattgctccgaaacttccccagaaaatcagaagaaaatcaagtatcaagactctcgtagaagggacttctaacgggactccgcccc 35345722  T
Q  496 tcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||  ||||| |||||    
T  35345721 tcaaaatccaaaattccaccgtttaaaccca 35345691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 72 - 329
Target Start/End: Original strand, 3937292 - 3937559
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataa 161  Q
    ||||||| || ||||||||| ||||||| ||||||  ||||||| ||||| ||||||||||| ||||||||||| |||||           ||||| |||    
T  3937292 caaaaatgcccttgaggtttccggattttataatccagaatggtgttttcctttgttataggatgaaaaatggagttacgagtttttccgaattttgtaa 3937391  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaaatagttcagatt 261  Q
    ||||||||||||||||||||| | | ||||||||||||||| ||||||||| || || ||||        ||||||| ||||||||||||||||| ||||    
T  3937392 tccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataattcgaaaac--------acccttttttaaggtaaaatagttcggatt 3937483  T
Q  262 atataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaat 329  Q
    ||||||||||||| ||||||||||||||||||||        ||||||||||| |||||||| |||||||||||||    
T  3937484 atataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaat 3937559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 150 - 429
Target Start/End: Complemental strand, 49096394 - 49096105
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||  ||||||||||  |  ||||||||||| ||| || ||||||| ||||  | |||||| ||||| ||||| | |||| ||    
T  49096394 cggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatccaaacaccccctaaacagcctttttcaaggaaa 49096295  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga-caatattaatatttataact 339  Q
    || ||||   ||||||||||| |||| ||||||||||||||  ||||        ||||||  |||| ||||||||||| |||||| ||| ||  |||||    
T  49096294 aacagtttgaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaact 49096195  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    || |||||| ||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  49096194 ctcatccttctgttttgagtcattgttacctgttcttcgtcaaaaatcgagttttcgggctacttgatcggattgctccaaaacttcccc 49096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 425
Target Start/End: Original strand, 47123173 - 47123302
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||  ||||||||||||||||||||| ||  ||||||| |||||| ||||||||| ||||||||| |||||||||| ||||| ||  |||||    
T  47123173 taacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttgggccattgttacctgttcttagttaaaaaccgaattttc 47123272  T
Q  396 gggctacttgatcggattgctctgaaactt 425  Q
    |||||||||||||||||||||| |||||||    
T  47123273 gggctacttgatcggattgctccgaaactt 47123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 309 - 425
Target Start/End: Original strand, 47130552 - 47130668
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||||||||||||||||| ||  ||||||| |||||| ||||||||| ||||||||| |||||||||| ||||| ||  ||||||||||||||||||    
T  47130552 cattttagggacaatattaatcttcctaactctcatccttctgttttgggccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatc 47130651  T
Q  409 ggattgctctgaaactt 425  Q
    ||||||||| |||||||    
T  47130652 ggattgctccgaaactt 47130668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 359
Target Start/End: Original strand, 33438517 - 33438731
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaa-caccctttcttaaggtaaaat 251  Q
    ||||| ||||||  |||||||||||||||| | | ||||||||||||| ||||||||||| ||  |||||||| |||| |||| ||| | |||||||||     
T  33438517 attttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtt-ccggattacataatgtggaaaccctcaaaacaccatttttcaaggtaaaac 33438615  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| |||||||||||| |||| |||||||||||||| |||||        ||| ||| |||| ||||||||||||||||||||| ||  ||||||| |    
T  33438616 agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactctca 33438715  T
Q  344 tccttttgttttgggt 359  Q
    ||||| ||||||||||    
T  33438716 tccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 296 - 425
Target Start/End: Complemental strand, 5127911 - 5127782
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| |||||||| ||||||||||||| || ||| |||| |||| ||||||||| |||||||||| |||||||| |||||||||| |||||||    
T  5127911 taacatggatatccattttatggacaatattaatcttcatagctctcatccatttgttttgcgtcattgttagttgttcttggtcaaaaatctggttttc 5127812  T
Q  396 gggctacttgatcggattgctctgaaactt 425  Q
    || ||||||||| | |||||| ||||||||    
T  5127811 ggactacttgattgaattgctttgaaactt 5127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 296 - 425
Target Start/End: Original strand, 46624867 - 46624996
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    |||||||||||| ||||||| ||| ||||||||| ||  ||||||| |||||| |||||||||||||| ||| ||||| |||||||||||||   ||||     
T  46624867 taacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaatctaattttt 46624966  T
Q  396 gggctacttgatcggattgctctgaaactt 425  Q
    || ||||||||||| ||||||| |||||||    
T  46624967 ggactacttgatcgaattgctccgaaactt 46624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 310 - 416
Target Start/End: Original strand, 29048503 - 29048610
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagt-caaaaatcgggttttcgggctacttgatc 408  Q
    |||||| ||| ||||||||| || ||||||||||||||| |||||| |||||||||||  ||||||||||  ||||||| ||||||| ||||||||||||    
T  29048503 attttaaggataatattaatcttcataactcttatccttatgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatc 29048602  T
Q  409 ggattgct 416  Q
    ||||||||    
T  29048603 ggattgct 29048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 525
Target Start/End: Original strand, 4394277 - 4394355
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||||||| ||||||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  4394277 tcaaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatcgtttagaccc 4394355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 322 - 428
Target Start/End: Original strand, 40062552 - 40062658
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  |||||||  |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||| | |||    
T  40062552 atattaatcttcctaactctggtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaa 40062651  T
Q  422 acttccc 428  Q
    | |||||    
T  40062652 atttccc 40062658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 310 - 429
Target Start/End: Original strand, 51492960 - 51493080
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagt-caaaaatcgggttttcgggctacttgatc 408  Q
    |||||| ||||||||||||| ||  ||||||| |||||| |||||| |||||||||||  ||||||||||  |||||| ||||||| || ||||||||||    
T  51492960 attttatggacaatattaatcttcctaactctcatccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatc 51493059  T
Q  409 ggattgctctgaaacttcccc 429  Q
     |||||||| |||||||||||    
T  51493060 agattgctccgaaacttcccc 51493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 447 - 526
Target Start/End: Original strand, 29048628 - 29048707
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| || ||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||    
T  29048628 tcaaggatcaagactcccgtagaaaggacttattacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 29048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 425
Target Start/End: Original strand, 33439383 - 33439457
Alignment:
Q  351 gttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    |||||||||||||||||||| |||||||| ||||||| | ||||||| ||||||||||||||||||| |||||||    
T  33439383 gttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctccgaaactt 33439457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 48303895 - 48304060
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaatta----------cggattttataa 161  Q
    ||||||| || ||||||||| | |||||||||||| |||||||| ||||| ||||||| |||||||||||  || |||          |||||||| |||    
T  48303895 caaaaatgcccttgaggtttccagatttcataatccggaatggtgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaa 48303994  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc 227  Q
    ||||||||  ||||||||||| |||||||||||||| ||| | |||||||| ||||| ||||||||    
T  48303995 tccggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatccgaaaaccccc 48304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 501034 - 500970
Alignment:
Q  460 ctcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  501034 ctcccatagaagggacttcttacggcactccgcccctcaaaatccaaaattccatcgtttagacc 500970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 42936575 - 42936658
Alignment:
Q  74 aaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttt 157  Q
    |||||||| |||| |||| |||||||||||||| |||||||| ||||| ||||||| ||||||||||| ||| |||||||||||    
T  42936575 aaaatacccttgaagtttccggatttcataatccggaatggtgttttcctttgttaaagggtgaaaaaaggagttacggatttt 42936658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 507
Target Start/End: Complemental strand, 45711944 - 45711886
Alignment:
Q  449 aaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaa 507  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45711944 aaggatcaagactctcttagaagggacttcttacgggactccacccctcaaaatccaaa 45711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 296 - 429
Target Start/End: Complemental strand, 54229909 - 54229776
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| ||| |||| |||| |||||||| ||  | ||||  ||| || |||| | ||||||||||| ||||| ||||||||||||  |||||||    
T  54229909 taacatgaatatccagtttaaggaccatattaatcttccttactcgcatcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttc 54229810  T
Q  396 gggctacttgatcggattgctctgaaacttcccc 429  Q
      ||||||||||| ||||||||||||||||||||    
T  54229809 ttgctacttgatcagattgctctgaaacttcccc 54229776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 14828917 - 14828801
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtca-aaaatcgggttttcgggctacttgatc 408  Q
    |||||| ||| ||||||||| || ||||| || |||| | ||||||||||| |||||| ||||||||||||| |||||| | |||||||  ||||||||     
T  14828917 attttaaggataatattaatcttcataaccctcatccatctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgatt 14828818  T
Q  409 ggattgctctgaaactt 425  Q
    ||||||||| |||||||    
T  14828817 ggattgctccgaaactt 14828801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 33439494 - 33439564
Alignment:
Q  456 atgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||| || ||||||||| |||||| ||||| |||| |||||||||||||||||| |||||||||||    
T  33439494 atgactcccataaaagggacttgttacggaactccgccccacaaaatccaaaattccatcgtttagaccca 33439564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 429
Target Start/End: Complemental strand, 4300276 - 4300159
Alignment:
Q  312 tttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcgga 411  Q
    |||| ||||||||||||| ||  ||||| | |||||||||| || |||||||||||  |||||||||| |||||||  ||||| |||||  |||||  ||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattaga 4300177  T
Q  412 ttgctctgaaacttcccc 429  Q
    ||||||| ||||||||||    
T  4300176 ttgctctaaaacttcccc 4300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 41300908 - 41300985
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||| ||||||  |||||  ||||||||||||||||| ||| |||||||| |||||||||| |||||||||    
T  41300908 tcaaggaccattactcccgcagaagaaacttcttacgggactccgcccatcaaaatcaaaaattccatcgtttagacc 41300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 45244822 - 45244878
Alignment:
Q  465 ttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  45244822 ttagaagagacttcttacgggactcca-ccctcaaaatccaaaattccattatttaga 45244878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 50384462 - 50384354
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagt-caaaaatcgggttttcgggctacttgatcggattgctctga 420  Q
    |||||||| ||||||||||| |||||| ||||||  |||||||||| || ||||||||  ||||||   |||||||| | |||||||| |||||||| ||    
T  50384462 atattaatctttataactctaatccttctgttttatgtcattgttagttattcttagtaaaaaaatgcagttttcggtccacttgatcagattgctccga 50384363  T
Q  421 aacttcccc 429  Q
    |||||||||    
T  50384362 aacttcccc 50384354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 45244606 - 45244672
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||  |||||||||    
T  45244606 gactcccttagaaaggacttcttacgagactcc-gccctcaaaatccaaaattccatcatttagaccc 45244672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 42937200 - 42937114
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta 158  Q
    |||||||| |||||| ||||||| ||||||||||| | |||||||||| | ||||||| |||||||||||  || ||||| ||||||    
T  42937200 caaaaatatctttgaagttttcgaatttcataatccgaaatggtatttccctttgttaaagggtgaaaaaatgagttacgaatttta 42937114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 524
Target Start/End: Complemental strand, 43471524 - 43471466
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||| |||||||||  |||||||||||||||||||||||||| ||| |||||||||    
T  43471524 tagaaggaacttcttacaagactccacccctcaaaatccaaaatttcatcgtttagacc 43471466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 312 - 421
Target Start/End: Complemental strand, 43472265 - 43472155
Alignment:
Q  312 tttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaa-tcgggttttcgggctacttgatcgg 410  Q
    |||| |||| |||||||| ||| ||||||  |||||| |||||||  ||| |||||  |||||||||| ||||| || ||||| |||||||||||||| |    
T  43472265 tttaaggaccatattaatttttttaactcaaatccttctgttttgaatcaatgttagctgttcttagtaaaaaaatccggtttacgggctacttgatcag 43472166  T
Q  411 attgctctgaa 421  Q
    |||||||||||    
T  43472165 attgctctgaa 43472155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 34009936 - 34009888
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccat 514  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  34009936 tagaagggacttcttacgtgactccgccccccaaaatccaaaattccat 34009888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 8735078 - 8735144
Alignment:
Q  74 aaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||| |||||||| |||||||||||||||||  |||||||| ||||| ||||||| |||||||||||    
T  8735078 aaaatgcctttgag-ttttcggatttcataattcggaatggtgttttcctttgttaaagggtgaaaaa 8735144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 9087319 - 9087385
Alignment:
Q  74 aaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||| |||||||| |||||||||||||||||  |||||||| ||||| ||||||| |||||||||||    
T  9087319 aaaatgcctttgag-ttttcggatttcataattcggaatggtgttttcctttgttaaagggtgaaaaa 9087385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 30722055 - 30721996
Alignment:
Q  82 tttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||| ||||||||||||||||||||| | |||| ||||| |||||||||| ||||||||    
T  30722055 tttgatgttttcggatttcataatctgaactggtgttttcctttgttatagagtgaaaaa 30721996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 51816387 - 51816494
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| || |||||| | |||||  |||||| ||||||||||| |||||| ||||| |||||   |||||| || ||||||||| |||||||| |||    
T  51816387 atattaatcttcataactatcatcctcatgttttaggtcattgttagttgttcctagtcgaaaatatagttttctggttacttgatcagattgctccgaa 51816486  T
Q  422 acttcccc 429  Q
    | ||||||    
T  51816487 atttcccc 51816494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 524
Target Start/End: Complemental strand, 14828758 - 14828700
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||| |||||||||| ||||||| ||  ||||||||||||||||||| |||||||||    
T  14828758 tagaagagacttcttacaggactccgcctttcaaaatccaaaattccatcgtttagacc 14828700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 32025194 - 32025254
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||| |||||    
T  32025194 gactcccttagaaggga-ttcttatgggactccaccc-tcaaaatcccaaattccatcgttta 32025254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 34821563 - 34821509
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccg 204  Q
    |||||||| |||||||||||||||||||||||| | | ||||| |||||||||||    
T  34821563 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttccg 34821509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 521
Target Start/End: Original strand, 26465079 - 26465124
Alignment:
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttag 521  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||    
T  26465079 ttcttacgggacttcgcccctcaaaatccagaattccattgtttag 26465124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 296 - 417
Target Start/End: Complemental strand, 34010101 - 34009980
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||||| | |||| |||  |||||||| ||| ||||||||||||||||||||| | |||||||||  || | ||||| ||||||  || |||     
T  34010101 taacatggatagctagtttaaggatcatattaatttttctaactcttatccttttgttttagatcattgttatctgctattagtaaaaaatatggatttt 34010002  T
Q  396 gggctacttgatcggattgctc 417  Q
    ||||||||| ||| ||| ||||    
T  34010001 gggctactttatcagatcgctc 34009980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 4300125 - 4300066
Alignment:
Q  459 actcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttt 519  Q
    |||||| || |||||||||||||| |||||||| |||||||||||||||||| ||| ||||    
T  4300125 actcccatataagggacttcttacaggactcca-ccctcaaaatccaaaatttcatcgttt 4300066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 49096059 - 49095999
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| ||||||||  ||||||||  |||||||||||||||||||||| ||| |||||||    
T  49096059 tagaagagacttcttgagggactccgtccctcaaaatccaaaattccatcgttaagaccca 49095999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 33700683 - 33700730
Alignment:
Q  94 ggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||||||||||| |||||||| ||||| ||||||| |||||||||||    
T  33700683 ggatttcataatccggaatggtgttttcctttgttaaagggtgaaaaa 33700730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 40062469 - 40062511
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaat 289  Q
    |||||||||| |||||||||||||||||  |||||||||||||    
T  40062469 aaaatagttcggattatataatccgaactatatcagcacaaat 40062511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 27143504 - 27143443
Alignment:
Q  228 aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaat 289  Q
    ||||||||||| | |||| |||| |||||| ||||||||||| || | ||||||||||||||    
T  27143504 aaacaccctttttcaaggaaaaacagttcaaattatataatctgatctgtatcagcacaaat 27143443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 29036128 - 29036181
Alignment:
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| ||||||||||  |||||||||||| |||||| ||| |||||||||||    
T  29036128 gacttcctacgggactctgcccctcaaaatctaaaatttcatcgtttagaccca 29036181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 43419964 - 43419911
Alignment:
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||| || |||| | |||||||||||||||||||| ||||| |||||    
T  43419964 gacttcttacgagattccatcactcaaaatccaaaattccatcgtttataccca 43419911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 51258329 - 51258378
Alignment:
Q  94 ggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatg 143  Q
    ||||||||||||| ||||| || ||||| ||||||| |||||||||||||    
T  51258329 ggatttcataatccggaattgtgttttcctttgttaaagggtgaaaaatg 51258378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 51816531 - 51816587
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    ||||| ||||||||||||||||||  ||||||||||| |||| || ||| |||||||    
T  51816531 tagaatggacttcttacgggactctgcccctcaaaattcaaattttcatcgtttaga 51816587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 3e-96; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 93 - 524
Target Start/End: Original strand, 15799112 - 15799562
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||          ||||| ||||||||||||||||||||||||    
T  15799112 cggatttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatag 15799211  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
     | | ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| | || |||||| | ||||||||||||||||||||| ||||||    
T  15799212 ggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaacgtaaaacatttcagattatataatccgaactgtatca 15799311  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgtt 373  Q
    |||||||| |||||        ||||||| |||| ||||||| ||||||||||| | ||  ||| ||  |||||| ||||||||||||||||||| ||||    
T  15799312 gcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttctgttttgggtcattgttacatgtt 15799411  T
Q  374 cttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaaggg 473  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||||| |||                ||||||||||||| ||||| ||||||||    
T  15799412 cttagtcaaaaatcgggtttccgggctacttgaccggattgctccgaaacttgcccagaaaatcaaaaaaaattcaaggaccatgcctcccctagaaggg 15799511  T
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||  | |||||||||||||||||||||||||||||||| |||||||||    
T  15799512 acttccaatgggactccacccctcaaaatccaaaattccatcgtttagacc 15799562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 93 - 526
Target Start/End: Original strand, 6156618 - 6157070
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||| |||||||| ||||| ||||||||| ||||||||||||| ||||||          ||||| ||||||||||||||||||||||||    
T  6156618 cggatttcataatccggaatggtgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatag 6156717  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
     | | ||||||||||||||||||||||||| |||||||||||||| ||||||||| | | |||||||||  |||| ||||||||||| ||||  ||||||    
T  6156718 ggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctctttcaaggtaaaaccgttcggattatataatacgaattgtatca 6156817  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgtt 373  Q
    ||| |||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| |||||| |||||| |||||||||||| ||||    
T  6156818 gcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttggtcattgttacatgtt 6156917  T
Q  374 cttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaaggg 473  Q
    |||||| ||||| |||||||| |||||||||||||||||||||| ||||||| |||                ||||||||||||||||||| ||| ||||    
T  6156918 cttagttaaaaaccgggtttttgggctacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagtaggg 6157017  T
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6157018 acttcttacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 6157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 153 - 523
Target Start/End: Complemental strand, 38692946 - 38692567
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaaata 252  Q
    ||||| |||||||||||||| ||||||||| | | ||||| ||||||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| |    
T  38692946 attttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtttccggattacataatccggaaacccctaaacaccctttttcaaggtaaaaca 38692847  T
Q  253 gttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttat 344  Q
    |||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||  ||||||| |||||||||||||||| |||||||| ||    
T  38692846 gttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttaaggacaatattaatattcataactctcat 38692747  T
Q  345 ccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnn 444  Q
    | || |||||||||||||||||||   |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||                   
T  38692746 ctttctgttttgggtcattgttacccattcttagtcaaaaatcgggttttcggactacttggtcggattgctccgaaacttccccaaaaaatcagaaaaa 38692647  T
Q  445 nttcaaggaccatgactccctta-gaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
     |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||    
T  38692646 attcaaggaccatgactcccttaggaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagac 38692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 150 - 524
Target Start/End: Original strand, 39524730 - 39525113
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||| ||||||||| | |||||||||||||||| |||||||||| || ||||||||||| ||||||||||| | |||||||    
T  39524730 cggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattcggaaaccccctaaacaccctttttcaaggtaa 39524829  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||| ||||||| |||||        ||| |||||||| ||||||||| ||||||||||| ||  ||||||    
T  39524830 aacagttcggattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactc 39524929  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||  |||||||||| |||||||| |||| ||||||               
T  39524930 tcatccttctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctccgaaatttccccagaaaatcaga 39525029  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
         ||||||||||||||||||||||||||| |||||||  |||||||  ||||||||||||||||||||||| |||||||||    
T  39525030 aaaaattcaaggaccatgactcccttagaaggaacttcttgtgggactctgcccctcaaaatccaaaattccatcgtttagacc 39525113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 88 - 526
Target Start/End: Original strand, 33487492 - 33487950
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaa 177  Q
    |||| |||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||||          ||||| ||||||| |||||||||||    
T  33487492 gtttccggatttcataatccggaatggtgttttcctttgttacagggtgaaaaatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaa 33487591  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacag 276  Q
    ||||| | | |||| ||||||||| ||| |||||| |||||||||| ||| |||||||| || | ||||||||| ||||| ||||||||||||||||| |    
T  33487592 aatagggcgcgttatatgatgttttcgggttacataatccggaaactccctaaacaccccttttcaaggtaaaacagttcggattatataatccgaactg 33487691  T
Q  277 tatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtcattgtta 367  Q
    ||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||  ||||| ||||||||||||    
T  33487692 tatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcagtttttgggtcattgtta 33487791  T
Q  368 cttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactccctta 467  Q
    | ||||||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||                 ||||||| |||||||||||||    
T  33487792 catgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttccccagaaaatcagaaaaaagtcaaggatcatgactccctta 33487891  T
Q  468 gaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||  ||||| || ||||| ||||||||||||||||| |||||||||||    
T  33487892 gaagggacttcttttgggaccccgcccctaaaaatccaaaattccatcgtttagaccca 33487950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 74 - 524
Target Start/End: Complemental strand, 12465356 - 12464902
Alignment:
Q  74 aaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatc 163  Q
    ||||| |||||||| |||||||||||||| |||  ||||||| ||| | |||   ||||||||||||||||| |||||||||||           |||||    
T  12465356 aaaatgcctttgagtttttcggatttcatgatccagaatggtgtttgccttt---atagggtgaaaaatggagttacggatttttccggattttgtaatc 12465260  T
Q  164 cggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaaatagttcagattat 263  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||   ||||||||||| ||||||| ||| || |||||||||||||| || |||    
T  12465259 cggaaacttcaaaaaatagggcgtgttacatgatgtttccggattaaat---ccggaaacccctaaacaccatttttttaggtaaaatagttctgagtat 12465163  T
Q  264 ataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt 355  Q
    |||||||||         ||||||||||||||        ||| ||||||||  |||||||||||||||||||| || ||||||||||||||||||||||    
T  12465162 ataatccga---------gcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatccttttgtttt 12465072  T
Q  356 gggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc-nnnnnnnnnnnnnnnnttcaaggac 454  Q
    || ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||                 |||||||||    
T  12465071 ggatcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactaccccaaaaaatcagaaaaaaattcaaggac 12464972  T
Q  455 catgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||  ||||||| ||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  12464971 catgactcctatagaaggaacttcttacgggactctgcccctcaaaatccaaaattccattatttagacc 12464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 150 - 523
Target Start/End: Original strand, 20891567 - 20891948
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| |  |||||||||||||||||| ||||||| ||||| |||||||| ||||||||||| | |||||||    
T  20891567 cggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaaccccctaaacaccctttttcaaggtaa 20891666  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| |||||||||||| |||| |||||||||||||| |||||        ||||||| |||| ||||||||||| ||||||||| ||  ||||||    
T  20891667 aacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactc 20891766  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||               
T  20891767 tcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggttttcaggctacttgatcggattgctccgaaacttcccc-agaaaacaga 20891865  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
         |||||||| |||||||||| || |||||||||||||||||| |||  || ||||||||||||||||||| ||||||||    
T  20891866 aaaaattcaaggatcatgactcccctacaagggacttcttacgggattccgtccttcaaaatccaaaattccatcgtttagac 20891948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 159 - 524
Target Start/End: Complemental strand, 31221497 - 31221123
Alignment:
Q  159 taatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttca 257  Q
    ||||||| |||||||||||||||  | | ||||||||||||||| ||||||||| |||||||||||| | ||||||||||| | ||||||||| |||||     
T  31221497 taatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaacagttcg 31221398  T
Q  258 gattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttt 349  Q
    ||||||||||||| ||| ||||||||||||||  ||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||| ||     
T  31221397 gattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatctttc 31221298  T
Q  350 tgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttca 449  Q
    ||||||||||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||||| |||||||||||                ||||    
T  31221297 tgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattca 31221198  T
Q  450 aggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||| ||||| || |||||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||    
T  31221197 aggaccgtgacttccatagaagggacttcttacgagactccgcccctcaaaatccaaaatttcatcgtttagacc 31221123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 88 - 429
Target Start/End: Complemental strand, 4064959 - 4064598
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaacttcaaaa 177  Q
    |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| ||||           |||||||||||||| ||||    
T  4064959 gtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgtaatccggaaactttaaaa 4064860  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacag 276  Q
    ||||| | |||||| |||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||||  ||||||||||||||||      
T  4064859 aatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcgaattatataatccgaactt 4064760  T
Q  277 tatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatcctt-ttgttttgggtcattgtta 367  Q
    ||||||||||||| |||||        ||||||| |||| ||||||||||||||| ||||| ||  ||||| | |||||| |  ||||||||||||||||    
T  4064759 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttctatttttgggtcattgtta 4064660  T
Q  368 cttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    | |||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||||    
T  4064659 cctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttcccc 4064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 72 - 524
Target Start/End: Original strand, 15957617 - 15958086
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatgg--aat-------tacggattttataat 162  Q
    ||||||| |||||||| ||||||||||| |||||| | |||||| ||||| ||||||| |||||||||||||   |||       | |||||||| ||||    
T  15957617 caaaaatgcctttgag-ttttcggattttataatccgaaatggtgttttcttttgttaaagggtgaaaaatgagtaatggatttttccggattttgtaat 15957715  T
Q  163 ccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagatt 261  Q
     |||||||||| |||||||| | || ||||||||||||||||||||| || |||||||||||||| |||||||| || | ||||||||| ||||  ||||    
T  15957716 tcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatccggaaaccccctaaacacccattttcaaggtaaaacagtttggatt 15957815  T
Q  262 atataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtt 353  Q
    |||||||| |||| ||||||| |||||| |||||        ||||||  ||||  |||||||||||||||||||| ||  |||||||  | ||||||||    
T  15957816 atataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaactctggttcttttgtt 15957915  T
Q  354 ttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaagga 453  Q
    |||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||                ||||||||    
T  15957916 ttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaagga 15958015  T
Q  454 ccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||| ||||||||||||| ||||||||| |||||| | || |||||||||||||||| ||| |||||||||    
T  15958016 ccataactcccttagaagcgacttcttatgggacttcgcctctcaaaatccaaaatttcatcgtttagacc 15958086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 152 - 526
Target Start/End: Complemental strand, 37183947 - 37183563
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttctt-aaggtaaa 249  Q
    |||||| |||||  ||||||||||||||||| |   |||||||||| ||| | |||||||| |||||||||||| | ||||||||||| || |||| |||    
T  37183947 gattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaaaccctctaaacacccttttttcaaggcaaa 37183848  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatattaatatttataactct 341  Q
    | |||   |||||||||||| |||| |||||| ||||||| |||||||        ||||| |||| ||||||| ||||||||||||| ||  |||||||    
T  37183847 acagtctggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactct 37183748  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnn 441  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||                
T  37183747 catctttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccataaaatcagaa 37183648  T
Q  442 nnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
        ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  37183647 aaaattcaaggaccatgactcccgtagaagggacatcttacgggactccgcccctcaaaatccaaaattccatcatttagaccca 37183563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 150 - 521
Target Start/End: Original strand, 38871625 - 38872005
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||| |||||||| ||||||| | | ||||||||||||||||||||||||| ||||| |||||| | ||||| | ||| | |||||||    
T  38871625 cggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccctctaaacatcttttttcaaggtaa 38871724  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| |||||||||||||||| |||| ||  ||||||    
T  38871725 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactc 38871824  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||| ||||||| |||               
T  38871825 tcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctccgaaactttcccagaaaatcaga 38871924  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttag 521  Q
         |||||||||| ||||||||  ||||| ||||||||||||||||   ||||| |||||||||||||| || ||||||    
T  38871925 aaaaattcaaggaccgtgactcccaaagaagagacttcttacgggactttgccccttaaaatccaaaattctatcgtttag 38872005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 151 - 514
Target Start/End: Original strand, 38372264 - 38372628
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccc-caaacaccctttcttaaggtaaa 249  Q
    ||||||| |||||||||||||| ||||||||| | | ||||||||||||||||||||||||| || ||||||||||  ||| ||||||| | ||||||||    
T  38372264 ggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattcggaaaccccttaaataccctttttcaaggtaaa 38372363  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactct 341  Q
    | ||||||||||||||||||||||| |||| ||||||||| |||||        | ||||| |||| ||||||||||||||||||||| ||  |||||||    
T  38372364 acagttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactct 38372463  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnn 441  Q
     ||  ||         ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||                
T  38372464 cataatt--------cgtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatcggatcgctccgaaacttccccagaagatcagaa 38372555  T
Q  442 nnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccat 514  Q
        |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38372556 aaaattcaaggaccatgacttccttagaagagacttcttacgggactccacccctcaaaatccaaaattccat 38372628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 206 - 526
Target Start/End: Complemental strand, 31929235 - 31928907
Alignment:
Q  206 attacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------t 296  Q
    ||||||| |||||||||||||| |||||||| || | ||||||||| ||||| |||||||||||| |||| ||||||||||||||  ||||        |    
T  31929235 attacataatccggaaaccccctaaacaccccttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgt 31929136  T
Q  297 aacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcg 396  Q
    |||||| |||| ||||||||| ||||||||||| ||  ||||||| |||||| ||||||| ||||||||||| |||||||||| ||||| | ||||||||    
T  31929135 aacatggatagtcattttagg-acaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagttaaaaaccaggttttcg 31929037  T
Q  397 ggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccct 496  Q
    ||||||||||||||||||||| |||||||||||                ||||||||||||||||||||||||||||||||||| ||||||||| ||| |    
T  31929036 ggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttgcgggactccgccctt 31928937  T
Q  497 caaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||| ||| |||||||||||    
T  31928936 caaaatccaaaatttcatcgtttagaccca 31928907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 28083545 - 28083158
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||||||| |||||||||||| | |  ||||||||| |||||||||||||| |||||||||||| | ||||||||||| | || ||||    
T  28083545 cggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatatttccggattacataatccggaaaccctctaaacaccctttttcaacgtaa 28083446  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||| | ||||||||||||||||| ||||||||||||||  ||||        ||||||| |||| ||||||||||||||||||||| ||| |||||     
T  28083445 aacagtccggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactt 28083346  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| |||||| |||||||||||| |||||||||  |||||||| |||||||| ||||||||||||||||||| || ||||||||               
T  28083345 tcatccttctgtttttggtcattgttacctgttcttaggaaaaaatcgagttttcggactacttgatcggattgctccgatacttccccagaaaatcaga 28083246  T
Q  441 nnnnnttcaaggaccatgactcccttagaag--ggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         ||||||||||||||||||||||||||    | |||||| ||||||   ||||||||||||||||||||||| ||| |||||||    
T  28083245 aaaaattcaaggaccatgactcccttagaagcaaaaattcttatgggactatgcccctcaaaatccaaaattccatcgttcagaccca 28083158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 40620157 - 40619767
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| |   |||| ||||||||| |||||||||| |||||||||||||| ||||| | ||| | |||||||    
T  40620157 cggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccggaaaccccctaaacatcatttttcaaggtaa 40620058  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||| ||||||||||||||||||||  ||||||| |||||| |||||        ||||||| | |  ||||||||||||||||||||| ||  ||||||    
T  40620057 aatatttcagattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactc 40619958  T
Q  341 ttat-ccttttgttttgggtcattgttacttgttc----ttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnn 435  Q
    | || |||| ||||||||||||||||||| |||||    ||||||||||||||||||| ||| ||||||| |||||||| || ||||||||||           
T  40619957 tcatcccttctgttttgggtcattgttacctgttcttaattagtcaaaaatcgggtttccggactacttggtcggattgttccgaaacttccctagaaaa 40619858  T
Q  436 nnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
              |||||||| |||||||||   |||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  40619857 tcataaaaaattcaaggatcatgactccaaaagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcatttagaccca 40619767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 83 - 343
Target Start/End: Complemental strand, 26190542 - 26190263
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaactt 172  Q
    ||||||||| | || |||||||||||||||||| ||||| ||| |||| |||||||||||||| |||||||||||           ||||||||||||||    
T  26190542 ttgaggtttccagacttcataatctggaatggtgttttcctttcttatcgggtgaaaaatggagttacggatttttccggattttgtaatccggaaactt 26190443  T
Q  173 caaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccg 271  Q
    |||||||||| ||| |||||||||||||| |||||||||| || | ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  26190442 caaaaaatagggtgcgttacatgatgttttcggattacataattcagaaaccccctaaacacccttttttaaggtaaaatagttcggattatataatccg 26190343  T
Q  272 aacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||| ||||||||||||||||||||        |||||||||||||||||||| ||| ||| ||||||||  |||||||||    
T  26190342 aactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactctta 26190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 235 - 526
Target Start/End: Original strand, 7884233 - 7884533
Alignment:
Q  235 ctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatatt 326  Q
    |||| ||||||||||| |||||  ||||||||||| |||| |||||| ||||||| |||||||        | |||||| | ||||||||||||||||||    
T  7884233 cttttttaaggtaaaacagttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatatt 7884332  T
Q  327 aatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttc 426  Q
    ||| ||  ||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  7884333 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttc 7884432  T
Q  427 ccc-nnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||                 ||||||||||||||||||| |||||| |||||||||||| ||||| |||||||||||| |||||| ||||||||||||||    
T  7884433 ccctataaaatcagaaaacattcaaggaccatgactcccgtagaagagacttcttacggaactccgcccctcaaaatctaaaatttcattgtttagaccc 7884532  T
Q  526 a 526  Q
    |    
T  7884533 a 7884533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 32842139 - 32841753
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||||||| | | | || || || ||||  |||||||| ||||| | |||||  ||||||||||| | |||| ||    
T  32842139 cggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacaccctttttcaagggaa 32842040  T
Q  249 aat-agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttaggga-caatattaatatttataac 338  Q
    ||  ||||| ||||||||||| ||||  ||||||||||||||  ||||        ||||||| |||| ||||||||||| |||||||||| ||  ||||    
T  32842039 aaacagttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaac 32841940  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnn 438  Q
    ||| |||||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||| || |||             
T  32841939 tctcatccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaaatt-cccagaaaatca 32841841  T
Q  439 nnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
           |||||||| |||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  32841840 gaaaaaattcaaggatcatgactcccctagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagaccca 32841753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 296 - 526
Target Start/End: Original strand, 14111976 - 14112204
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| ||||||||||||||||||||| ||  ||||| | |||||| |  ||||||| |||||||||||||||||||||||||||||||||||    
T  14111976 taacatggatagtcattttagggacaatattaatcttcctaactttcatccttat--tttgggttattgttacttgttcttagtcaaaaatcgggttttc 14112073  T
Q  396 gggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccc 495  Q
    || ||||||||| ||||||||| |||||||||||                |||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  14112074 ggactacttgataggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgaatcccatagaagggacttcttacgggactccgcccc 14112173  T
Q  496 tcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||| |||||||||||    
T  14112174 tcaaaatccaaaattccatcgtttagaccca 14112204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 169 - 428
Target Start/End: Complemental strand, 24203832 - 24203564
Alignment:
Q  169 acttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataa 267  Q
    |||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||| ||||| | ||||||||    
T  24203832 acttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttagggtaaaacagttcgggttatataa 24203733  T
Q  268 tccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggt 359  Q
    ||||||| ||||||||| |||| |||||        ||||  | |||  ||||||| ||||||||||||| ||  ||||||| | |||| |||||||| |    
T  24203732 tccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttcctaactctcaaccttctgttttggat 24203633  T
Q  360 cattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    ||||||||| |||||||||| |||||| | |||||||||||| ||||||||||||||| ||||||||||    
T  24203632 cattgttacctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttccc 24203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 167 - 428
Target Start/End: Original strand, 29862583 - 29862854
Alignment:
Q  167 aaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatat 265  Q
    |||||||||||||||| | | ||||  ||||||||||||||||||| |||||||||||||| ||||||| ||| | ||||||||| |||||  |||||||    
T  29862583 aaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgaattatat 29862682  T
Q  266 aatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg-ttttg 356  Q
    ||||||||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||| | ||||||  | |||||    
T  29862683 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgtttttg 29862782  T
Q  357 ggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    ||||||| |||| ||||||||||||||||||  ||||||||||||||||||  |||||||| ||||||||||    
T  29862783 ggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccc 29862854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 321 - 523
Target Start/End: Complemental strand, 26898790 - 26898588
Alignment:
Q  321 aatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctga 420  Q
    ||||||||| ||  ||||||| |||||| ||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccga 26898691  T
Q  421 aacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||| |||                ||||||||||||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||    
T  26898690 aacttgcccaaaaaatcagaaaaaattcaaggaccatgactcctgtagaagggacttcttacaggactccgcccctcaaaatccaaaatttcatcgttta 26898591  T
Q  521 gac 523  Q
    |||    
T  26898590 gac 26898588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 365 - 526
Target Start/End: Complemental strand, 26190265 - 26190104
Alignment:
Q  365 ttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactccc 464  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||                ||||| |||||||||||||    
T  26190265 ttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttccccaaaaaatcaaaaaaaattcaacgaccatgactccc 26190166  T
Q  465 ttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
     ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  26190165 ctagaaggaacttcttaagggactccgcccctcaaaatccaaaattccattgtttagaccca 26190104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 150 - 329
Target Start/End: Original strand, 25746980 - 25747167
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||||||||| ||| | | |||||||||||||| |||||||||| ||||||||| |||| ||||||| ||| |||||||||    
T  25746980 cggattttctaatccggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccggaaatcccctaaacaccattttttaaggtaa 25747078  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaat 329  Q
    || ||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| |||||||||||||| ||||||    
T  25747079 aacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaat 25747167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 319 - 525
Target Start/End: Original strand, 27212836 - 27213041
Alignment:
Q  319 acaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctct 418  Q
    ||||||||||| ||  ||||||| |||||| || |||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||||||     
T  27212836 acaatattaatcttcctaactctcatccttctggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgctcc 27212935  T
Q  419 gaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtt 518  Q
    || |||||||                 ||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  27212936 gatacttccc-tagaaaatcagaaaaattcaacgtccatgactcccctagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtt 27213034  T
Q  519 tagaccc 525  Q
    |||||||    
T  27213035 tagaccc 27213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 34440621 - 34440776
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatag 182  Q
    ||||||||| || ||||||||||||| |||| | ||||| ||||||||||||| ||||||||| ||||||||||| ||||||| ||||||| ||||||||    
T  34440621 ttgaggtttccgaatttcataatctgaaatgatgttttcctttgttatagggtaaaaaatggagttacggattttgtaatccgaaaacttc-aaaaatag 34440719  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacacccttt 238  Q
       | |||||||||||||| |||||| ||| ||||| |||||||| |||||||||||    
T  34440720 gacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacacccttt 34440776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 72 - 238
Target Start/End: Original strand, 26318984 - 26319160
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaatta----------cggattttataa 161  Q
    ||||||| || ||| ||||| |||||||||||||  |||||||| ||||| ||||||||||||||||||||||| |||          |||||||| | |    
T  26318984 caaaaatgcccttgcggtttccggatttcataattcggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtta 26319083  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacacccttt 238  Q
    ||||||||||||  ||||||| ||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  26319084 tccggaaacttc-caaaatagggtgcgttacatgatgtttccggattacataatccgaaaaccccctaaacacccttt 26319160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 429
Target Start/End: Original strand, 23269459 - 23269579
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||| ||||||||||||| ||  ||||||| || ||| | || ||||| || ||||  |||||||| ||||||||||||||||||||||||||||||    
T  23269459 cattttaaggacaatattaatcttcctaactctcattcttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatc 23269558  T
Q  409 ggattgctctgaaacttcccc 429  Q
    ||||||||  |||||||||||    
T  23269559 ggattgcttcgaaacttcccc 23269579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 309 - 429
Target Start/End: Original strand, 12847565 - 12847685
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||| ||||||||||||| ||   ||||||  |  || |||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  12847565 cattttatggacaatattaatcttcccaactctcgtatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatc 12847664  T
Q  409 ggattgctctgaaacttcccc 429  Q
      ||| |||||||||||||||    
T  12847665 atattactctgaaacttcccc 12847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 152 - 429
Target Start/End: Original strand, 26095047 - 26095334
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaa-ggtaaa 249  Q
    |||||| ||||||  ||||  |||||||||||| | |||||||  | ||| |||||||||| ||||| | |||||  |||||| |||| | || || |||    
T  26095047 gattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacactctttttcaaaggaaaa 26095146  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactct 341  Q
    ||||||| |||||||||||| |||  |||||| || |||| |||||        ||||||| |||| ||| ||| ||||||||||||| ||  |||||||    
T  26095147 atagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatattaatcttcttaactct 26095246  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
     || ||| | ||||| |||||||||   |||| | ||| |||||||||||||| |||||||||| || |||||||| |||||||||||    
T  26095247 cattcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttcccc 26095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 37095168 - 37095084
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttt 157  Q
    ||||||| || |||||||||||| ||||||||||| |||||||| ||| | ||||||||||||||||||||||| |||||||||||    
T  37095168 caaaaatgcccttgaggttttcgaatttcataatccggaatggtgtttcc-tttgttatagggtgaaaaatggagttacggatttt 37095084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 526
Target Start/End: Original strand, 26093731 - 26093798
Alignment:
Q  459 actcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  26093731 actcccgtagaggggacttcttacgggactcctcccctcaaaatccaaaattccatcatttagaccca 26093798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 304 - 422
Target Start/End: Original strand, 13908665 - 13908783
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||| ||||||||||||| ||  ||||  | |||||| | ||||| ||||||||||  ||||||| |||||||||| ||||||| | |||||    
T  13908665 atagtcattttatggacaatattaatcttcttaaccttcatccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactact 13908764  T
Q  404 tgatcggattgctctgaaa 422  Q
    |||||||||||||| ||||    
T  13908765 tgatcggattgctccgaaa 13908783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 458 - 523
Target Start/End: Complemental strand, 8739132 - 8739067
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||||| ||| |||||||    
T  8739132 gactcccttagaaggaacttattacgggactccgcccctcaaaatccaaaattctattatttagac 8739067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 21070636 - 21070704
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| ||||||||||||||||  |||| |  |||||||||||||||||||||||||||||||||||    
T  21070636 gactcccctagaagggacttcttattggacactgcccctcaaaatccaaaattccattgtttagaccca 21070704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 16429250 - 16429317
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| |||||||  || ||||||||||    
T  16429250 gactaccttagaagggacttcttacgggactccgcccctcaaaattcaaaattttatcgtttagaccc 16429317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 6800892 - 6800810
Alignment:
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    |||||| |||||| |||||||||||  |||||||||||||||||| ||||||||  ||||||||||  ||||||| |||||||    
T  6800892 atccttctgttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctccgaaactt 6800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 446 - 490
Target Start/End: Complemental strand, 24203545 - 24203501
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactcc 490  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  24203545 ttcaaggaccatgactcccttagaagggacttcttatgggactcc 24203501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 526
Target Start/End: Complemental strand, 11186048 - 11185969
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| || ||||||| | ||||||||||||||||  ||||| ||||||||||| |||||||| || |||||||||||    
T  11186048 tcaaggatcaggactcccgttgaagggacttcttacgatactccgcccctcaaaattcaaaattcaatcgtttagaccca 11185969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 5456327 - 5456389
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||| ||||||||||| ||||||||||||||| || |||||||||||||||| ||| |||||    
T  5456327 gactcacttagaagggatttcttacgggactccgcctctcaaaatccaaaatttcatcgttta 5456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 14111850 - 14111940
Alignment:
Q  149 acggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaa-cccccaaacacccttt 238  Q
    ||||||||| |||||| ||||||||||||||||| | | ||||||||||||||  ||||||||| ||| | ||| |||| |||||||||||    
T  14111850 acggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacacccttt 14111940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 428
Target Start/End: Original strand, 33901094 - 33901200
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  |||||| ||||||| | |||| ||||||||||| ||||| ||||||||||||  | ||||| | ||| |||||| |||||||| |||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  422 acttccc 428  Q
    |||||||    
T  33901194 acttccc 33901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 43388009 - 43387944
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||||| |||||||||||||||||||   |||||||||||||||||||||  ||||||||    
T  43388009 gactcccttagaaaggacttcttacgggactcc-gtcctcaaaatccaaaattccatcatttagacc 43387944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 26622268 - 26622350
Alignment:
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcc 427  Q
    |||||| | |||| ||| ||||||| |||||  |||||||||||| ||||||||| |||||||||| |||||||| |||||||||    
T  26622268 atccttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcc 26622350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 523
Target Start/End: Complemental strand, 28445348 - 28445284
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||||||||||||||||||||| |  ||||| ||| ||||||||||||||||||| ||||||||    
T  28445348 gactcccttagaagggacttcttatgatactccgccc-tcaaaatccaaaattccatcgtttagac 28445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 510
Target Start/End: Original strand, 31561706 - 31561767
Alignment:
Q  449 aaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaatt 510  Q
    |||||||| ||||||| ||||||  ||||||||||||||| ||| |||||||||||||||||    
T  31561706 aaggaccaagactcccgtagaagaaacttcttacgggacttcactcctcaaaatccaaaatt 31561767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 40613673 - 40613556
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcg 409  Q
    |||||| ||||| ||||||| ||  ||||| | |||||| ||| || |||||||| ||  |||||||||| |||||||  ||||| | |||||||||||     
T  40613673 attttaaggacattattaatcttcctaactttcatccttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatca 40613574  T
Q  410 gattgctctgaaacttcc 427  Q
    |||||||| |||||||||    
T  40613573 gattgctccgaaacttcc 40613556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 26093620 - 26093684
Alignment:
Q  351 gttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgc 415  Q
    ||||||||||||||||| |||||||||||||||||| | |||||| ||||| |||| | ||||||    
T  26093620 gttttgggtcattgttagttgttcttagtcaaaaattgagttttcaggctatttgaacagattgc 26093684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 425
Target Start/End: Original strand, 27158194 - 27158322
Alignment:
Q  297 aacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcg 396  Q
    |||||| |||| ||||||| ||||||||||||  ||  |||  || ||||||   |||||||||||| ||| ||||| ||| | ||||||  |||||||     
T  27158194 aacatggatagtcattttaaggacaatattaagcttcctaatcctcatccttcacttttgggtcattattagttgttattaataaaaaattcggttttca 27158293  T
Q  397 ggctacttgatcggattgctctgaaactt 425  Q
    |||||||||||| |||||||| |||||||    
T  27158294 ggctacttgatcagattgctccgaaactt 27158322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 425
Target Start/End: Complemental strand, 41639483 - 41639373
Alignment:
Q  318 gacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagt---caaaaatcgggttttcgggctacttgatcggattg 414  Q
    |||||||||||| |   ||||||| ||| ||||||||| ||||||||||| |||||||||||    ||||||| | ||||| |||||||||||| ||||     
T  41639483 gacaatattaatttccctaactctcatctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatta 41639384  T
Q  415 ctctgaaactt 425  Q
    || ||||||||    
T  41639383 ctttgaaactt 41639373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 27212574 - 27212724
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaatta----------cggattttataa 161  Q
    ||||||| |||||||  |||||||||||||||||| | | || | ||||| |||||||||||||||||||  || |||          |||||||| |||    
T  27212574 caaaaatgcctttgaaattttcggatttcataatccgaactgatgttttcctttgttatagggtgaaaaaatgagttacgggttttttcggattttgtaa 27212673  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacat 212  Q
    |||| |||  ||||||||||| ||| |||||||||| ||| ||||||||||    
T  27212674 tccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacat 27212724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 36359827 - 36359769
Alignment:
Q  86 aggttttcggatttcataatctggaat-ggtattttcgtttgttatagggtgaaaaatg 143  Q
    |||||| |||||||||||||||||||| ||| ||||| ||||||| |||||||||||||    
T  36359827 aggtttccggatttcataatctggaatgggtgttttcttttgttaaagggtgaaaaatg 36359769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 38640597 - 38640655
Alignment:
Q  83 ttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    |||| |||| ||||||| ||||||||||||||| ||||| ||||||| |||||||||||    
T  38640597 ttgaagtttccggattttataatctggaatggtgttttcctttgttaaagggtgaaaaa 38640655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 16504552 - 16504589
Alignment:
Q  463 ccttagaagggacttcttacgggactccacccctcaaa 500  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  16504552 ccttagaagagacttcttacgggactccacccctcaaa 16504589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 1350519 - 1350451
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaa 140  Q
    ||||||| || ||||  |||||||||||||||||| | | |||| ||||| ||||||||||||||||||    
T  1350519 caaaaatgcccttgaaattttcggatttcataatccgaactggtgttttcctttgttatagggtgaaaa 1350451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 526
Target Start/End: Original strand, 27158371 - 27158423
Alignment:
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||| ||| ||| ||| ||||||||||||||||||||||| |||||||||||    
T  27158371 acttcatactggattccgcccctcaaaatccaaaattccatcgtttagaccca 27158423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 38640676 - 38640764
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacacccttt 238  Q
    |||||||||||||| |||||  ||||||||||| | | |||| ||||| | | |||||||||| ||||| | ||||| |||||||||||    
T  38640676 cggattttataatctggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatccgaacacccctaaacacccttt 38640764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 38640904 - 38640970
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||| ||  |||||||||||||||| | ||| |||||||||||||||||||  |||||||||    
T  38640904 gactcccttataaatgacttcttacgggactacgccc-tcaaaatccaaaattccatcatttagaccc 38640970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 526
Target Start/End: Original strand, 41253566 - 41253645
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| || |||||||||||||| ||||||||  | ||||||  || |||||||| |||||| ||| |||||||||||    
T  41253566 tcaaggatcaagactcccttagaagagacttctttagagactccgaccttcaaaatctaaaatttcatcgtttagaccca 41253645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 524
Target Start/End: Original strand, 33331420 - 33331478
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||||||||||  |||| |  |||||||||||||||||| ||| |||||||||    
T  33331420 tagaagggacttcttaccagacttcgtccctcaaaatccaaaatttcatcgtttagacc 33331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 8032225 - 8032314
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacc-cccaaacacccttt 238  Q
    |||||||| ||||| ||||| |||||||||||| |    ||||||||| |||||||||||||| ||||| | ||| || |||||||||||    
T  8032225 cggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacacccttt 8032314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 14001737 - 14001778
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaa 288  Q
    |||| ||||||||||||||||||||||| |||| ||||||||    
T  14001737 aaaacagttcagattatataatccgaactgtattagcacaaa 14001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Original strand, 18515100 - 18515145
Alignment:
Q  481 acgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||| |||||||||||| ||||||||||  ||||||||||    
T  18515100 acgggactccgcccctcaaaatctaaaattccatcatttagaccca 18515145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 19027337 - 19027386
Alignment:
Q  475 cttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||| |||| |||||||||||||||||||||  || |||||||||    
T  19027337 cttcttacgagacttcacccctcaaaatccaaaattatatcgtttagacc 19027386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 6800765 - 6800725
Alignment:
Q  483 gggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||||| ||||||||||||||||||| ||| ||||||||    
T  6800765 gggactccgcccctcaaaatccaaaatttcatcgtttagac 6800725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 38641112 - 38641163
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaatt 510  Q
    |||| ||||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  38641112 gacttccttagaagagacttcttacgggac-cctgccctcaaaatccaaaatt 38641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 1e-92; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 101 - 526
Target Start/End: Complemental strand, 41855110 - 41854680
Alignment:
Q  101 ataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtt 200  Q
    |||||| |||||||| |||||  |||||| |||||||||||  || | ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  41855110 ataatccggaatggtgttttctgttgttaaagggtgaaaaaatgagtaacggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtt 41855011  T
Q  201 tccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaataac 299  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||||||||  |||| |||||||||||||| |||   |||    
T  41855010 tccggattacatgatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatttgaactgtatcagcacaaattcta---aac 41854914  T
Q  300 atgt------atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttt 393  Q
    ||||      |||| ||||| ||||||||||||||| ||  ||||||| |||||| ||||||| ||||||||||  |||||||||| ||||| ||| |||    
T  41854913 atgtttgtaaatagtcatttcagggacaatattaatcttcctaactctcatccttctgttttgagtcattgttatctgttcttagttaaaaaccggattt 41854814  T
Q  394 tcgggctacttgatcggattgctctgaaacttcccc-nnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccac 492  Q
    | ||||||||||||||||||||||||||||||||||                 |||||||| |||||| || |||||||| |||||||| |||||||| |    
T  41854813 ttgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaaaaattcaaggatcatgacaccattagaaggaacttcttatgggactccgc 41854714  T
Q  493 ccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||||||| |||||||||||    
T  41854713 ccctcaaaatccaaaattccatcgtttagaccca 41854680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 150 - 526
Target Start/End: Original strand, 42894369 - 42894754
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||| |||||||||||||||| |||||||||   | ||||||||||||||||||||||||| |||||||||||||| ||||||| ||| | |||||||    
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||| | ||||||||| ||||||| |||||||||||||| |||||        ||||||| |||  ||||||||||||||||||||| ||  ||||||    
T  42894469 aacagtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactc 42894568  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    |  ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| ||| |||||||||||               
T  42894569 tcttccttctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttccccagaaaattaga 42894668  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  42894669 aaaaattcaaggaccatgactcccttagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 42894754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 72 - 397
Target Start/End: Complemental strand, 36949195 - 36948851
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taa 161  Q
    ||||||| | |||||||||| | |||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||           |||    
T  36949195 caaaaatgcatttgaggtttccagatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaa 36949096  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    || | |||||||||||||||| | | |||||||||||||| |||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||  |||    
T  36949095 tctgcaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttgttaaggtaaaatagtttggat 36948996  T
Q  261 tatataatccgaacagtatcagcacaaatcctaa--------ataacatgtatagccattttagggacaatattaatatttataactcttatccttttgt 352  Q
    |||||||||| ||| |||||||||||||||||||        |||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||    
T  36948995 tatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgt 36948896  T
Q  353 tttgggtcattgttacttgttcttagtcaaaaatcgggttttcgg 397  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||    
T  36948895 tttgggtaattgttacctgttcttagtcaaaaattgggttttcgg 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 159 - 525
Target Start/End: Complemental strand, 41510581 - 41510207
Alignment:
Q  159 taatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttca 257  Q
    |||||||||||||||||||||||| | | ||||||||||||||| ||||||||| ||| |||||||||| |||||||| || | ||||||||| ||| |     
T  41510581 taatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatctggaaaccccctaaacaccccttttcaaggtaaaacagtccg 41510482  T
Q  258 gattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttt 349  Q
    |||||||||||| |||| |||||||||||| | |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||     
T  41510481 gattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-atagtcattttagggacaatattaatcttcctaactctcatccttc 41510383  T
Q  350 tgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttca 449  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||||                 ||||    
T  41510382 tgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaattca 41510283  T
Q  450 aggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  41510282 aggaccatgactctcttagaaggaacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagaccc 41510207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 151 - 429
Target Start/End: Complemental strand, 32188030 - 32187743
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaa 249  Q
    ||||||| ||||| |||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||| ||| | ||||||||    
T  32188030 ggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtttccggattacataatccggaaacccccgaaacaccatttttcaaggtaaa 32187931  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatattaatatttataactct 341  Q
    | ||||| ||||||||||||||||| ||||||||||||||  ||||||        ||||| |||| ||||||||||||||||||||| ||  |||||||    
T  32187930 acagttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactct 32187831  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
     |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  32187830 catccttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 32187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 151 - 526
Target Start/End: Complemental strand, 33452604 - 33452219
Alignment:
Q  151 ggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaac-ccccaaacaccctttcttaaggtaaa 249  Q
    ||||||| |||| ||||||||||||||||||| | | |||||||||||||||||||| |||| |||||||||| ||| ||||||||||| | ||||||||    
T  33452604 ggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgtttccggatcacataatccggaaactccctaaacaccctttttcaaggtaaa 33452505  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactct 341  Q
    | ||||| ||||||||||||||||| |||| ||||||||| |||||        ||||||| |||  ||||||||||||||||||||| ||  |||||||    
T  33452504 acagttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactct 33452405  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaac-ttccccnnnnnnnnnnn 440  Q
     || ||||||||||||||| ||||||  ||||||||||||||||||||||||  || ||||||||||||||||||| ||||| |||||                
T  33452404 cattcttttgttttgggtctttgttatctgttcttagtcaaaaatcgggtttctggactacttgatcggattgctccgaaactttcccagaaaatcagaa 33452305  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
          |||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  33452304 aaaaaatcaaggaccatgactcccataaaagcgacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 33452219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 25217952 - 25217551
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaa 249  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||| || | ||||||||    
T  25217952 cggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaacccctaaacaccccttttcaaggtaaa 25217853  T
Q  250 atagttcagattatataat----------------ccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatat 325  Q
    | ||||| |||||||||||                | |||| |||| ||||||||| |||||        || |||| |||| |||||| |||||||| |    
T  25217852 acagttcggattatataattgtagataatataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattt 25217753  T
Q  326 taatatttataactcttatccttttg-ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaact 424  Q
    |||| ||  |||||||  ||||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || |||    
T  25217752 taatcttcctaactctcttccttctgtttttgggtcattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgacact 25217653  T
Q  425 tccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    || |                 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  25217652 tctctagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacc 25217553  T
Q  525 ca 526  Q
    ||    
T  25217552 ca 25217551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 150 - 428
Target Start/End: Original strand, 39447154 - 39447441
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||| |||||||||||||||| | |  ||||||||||||| |||||||||| ||| |||||||||  ||||||||||| | |||||||    
T  39447154 cggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatctggaaaccccataaacaccctttttcaaggtaa 39447253  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||||||| ||||||||||| | ||| |||||||||||||| |||||        ||||||| |||| |||||||  |||||||||||| ||  ||||||    
T  39447254 aatagttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactc 39447353  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccc 428  Q
    | |||||| | ||||||||||||||||| |||||||||||||||||||||| ||| | || |||||||||||||||||||||||||||    
T  39447354 tcatccttctattttgggtcattgttacatgttcttagtcaaaaatcgggtcttccgactgcttgatcggattgctctgaaacttccc 39447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 44465890 - 44465517
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgat-gtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggta 247  Q
    |||||||| |||||||||||||||||||||||| | | |||||||||| ||||  |||||||||  ||||||||||||| ||||||||||| | ||||||    
T  44465890 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtttatggattacatactccggaaaccccctaaacaccctttttcaaggta 44465791  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataact 339  Q
    ||| ||||| ||||||||||||||||  |||||||||||||| |||||        |||||||  ||| ||||||||||||||||||||| ||  |||||    
T  44465790 aaacagttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttagggacaatattaatcttcctaact 44465691  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnn 439  Q
    || |||||| ||||||||||||||||||| | |||||||||||||||| |||||||             ||||||||| |||| ||||||              
T  44465690 ctcatccttctgttttgggtcattgttacctcttcttagtcaaaaatcaggttttc-------------ggattgctccgaaatttccccagaaaatcag 44465604  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
          ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  44465603 aaaaaattcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcttttagaccca 44465517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 88 - 526
Target Start/End: Complemental strand, 15995348 - 15994896
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa--tggaa--------ttacggattttataatccggaaacttc-aaa 176  Q
    |||||||||||| |||||| |||||||| ||||| ||||||| |||||||||||  | | |        || |||||||| ||||| ||||||||| |||    
T  15995348 gttttcggattttataatccggaatggtgttttcttttgttaaagggtgaaaaaattagtaacgggtttttccggattttgtaatcgggaaacttcaaaa 15995249  T
Q  177 aaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaaca 275  Q
    |||||| | | ||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| | ||| ||||| ||||| ||||||||||| |||||     
T  15995248 aaatagggcgcgttgcatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaagctaaaacagttcggattatataattcgaact 15995149  T
Q  276 gtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgtta 367  Q
    ||||||||| |||| |||||        ||||||| |||| ||||||| ||||||||||||| ||| ||||||| ||| || ||||||||||||||||||    
T  15995148 gtatcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgtta 15995049  T
Q  368 cttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactccctta 467  Q
    | |||||||||| |||||| || ||||| | ||| ||||||||||||||| |||||||||||                ||||||      ||||| | ||    
T  15995048 catgttcttagtaaaaaattggattttcagactatttgatcggattgctccgaaacttccccataaaatcagaaaaaattcaag------gactctcata 15994955  T
Q  468 gaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  15994954 gaatggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagaccca 15994896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 149 - 429
Target Start/End: Original strand, 36874976 - 36875265
Alignment:
Q  149 acggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccca-aacaccctttcttaaggta 247  Q
    ||||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||||||| |||||||||||| |  |||||| ||| | ||||||    
T  36874976 acggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggta 36875075  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataact 339  Q
    ||| ||| | ||||||||||||| ||| |||| |||| |||| |||||        ||||||| |||| ||||||||||| ||||||||| ||  |||||    
T  36875076 aaacagtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaact 36875175  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    || |||||| |||||||||||||||||||  |||||||| |||||||||||||||| | |||||| |||| ||||||| ||| |||||||    
T  36875176 ctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctccgaatcttcccc 36875265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 153 - 386
Target Start/End: Complemental strand, 45153950 - 45153708
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| ||||| |||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  45153950 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac 45153851  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    |||| ||||||||||||  |||| |||||||||||| |  ||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| |    
T  45153850 agtttagattatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctca 45153751  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaat 386  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||    
T  45153750 tccttctgttttgggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 153 - 523
Target Start/End: Original strand, 5507411 - 5507794
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttc--cggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaa 249  Q
    ||||| ||||||  |||||||||||||||    | |||||||||| |||   ||||||| || ||||| | |||||| ||||||| |||||||||| |||    
T  5507411 attttgtaatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaacaccccctaaacaccttttcttaaggaaaa 5507510  T
Q  250 a-tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    | |||||| ||||||||||||||||| |||||||||||||| |||||        ||||||| |||| |||||||   ||||||||||| || | |||||    
T  5507511 aatagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatcttcacaactc 5507610  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc-nnnnnnnnnn 439  Q
    | || ||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||               
T  5507611 tcattcttctgttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttccccagaaaatcaga 5507710  T
Q  440 nnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
          |||||||| |||||||||| ||||||  |||||||| || ||||| ||||||||||||||||||||||| ||||||||    
T  5507711 aaaaaattcaaggatcatgactcccatagaagaaacttcttatggaactccgcccctcaaaatccaaaattccatcgtttagac 5507794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 72 - 524
Target Start/End: Original strand, 34517005 - 34517478
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacg----------gattttataa 161  Q
    ||||||| ||||||| |||||||||||||||| || | | |||| ||||| ||||||||| |||||||||  || |||||          |||||| |||    
T  34517005 caaaaatgcctttgaagttttcggatttcatattccgaactggtgttttcctttgttatacggtgaaaaaatgagttacgaattttttcggattttgtaa 34517104  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat-agttcaga 259  Q
    ||   |||  ||||||||||| | | |||||||||| |||| ||||||||| ||||  | |||||  ||||||| ||| | |||| ||||  ||||  ||    
T  34517105 tcgaaaaatctcaaaaaatagggcgcgttacatgatttttc-ggattacataatccaaataccccttaaacaccatttttcaagggaaaaacagtttgga 34517203  T
Q  260 ttatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg 351  Q
    ||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||| | |||||||||||  | |||||| | |||||||||    
T  34517204 ttatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatattaatcatcataactttcatccttttg 34517303  T
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc--nnnnnnnnnnnnnnnnttca 449  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||| |||                  ||||    
T  34517304 ttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctccgaaacttacccagaaagtcagaaaaaaaattca 34517403  T
Q  450 aggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||| |||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||    
T  34517404 aggatcatgactcccatagaagggacttcttacgggattccgcacctcaaaatccaaaattccatcgtttagacc 34517478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 525
Target Start/End: Complemental strand, 38308840 - 38308610
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatt--tataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttt 393  Q
    ||||||| || | ||||||| ||||||||||||| ||  ||||||| | |||||| ||||||||||| ||||||| ||||||||||||||||||||| ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  394 tcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacc 493  Q
    ||||||||||||||| ||||||||||||||||||||                |||||||| |||||||||||||||||||| || |||  ||||||| ||    
T  38308741 tcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaaaattcaaggatcatgactcccttagaagggaatttttattggactccgcc 38308642  T
Q  494 cctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||||||||||||||||||||||    
T  38308641 cctcaaaatccaaaattccattgtttagaccc 38308610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 150 - 429
Target Start/End: Complemental strand, 41203348 - 41203060
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaag-gta 247  Q
    |||||||| ||||||||||||| ||||||| | || ||| ||||| || |||| ||||||||| ||||| | |||||  ||||||||||| | ||| | |    
T  41203348 cggattttgtaatccggaaactacaaaaaa-atagggtgctacataatttttctggattacataatccgaacaccccgtaaacaccctttttaaagagaa 41203250  T
Q  248 aaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataact 339  Q
    ||| |||||||||||||||| |||||| ||||||||||||||  ||||        ||||||| |||| ||||||| ||||||||||||| ||  |||||    
T  41203249 aaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaact 41203150  T
Q  340 cttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
     | |||||| ||||||||||||||||||| |||||||||| |||||| || ||||||||| ||||||||||||||||| |||||||||||    
T  41203149 ttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttcccc 41203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 150 - 395
Target Start/End: Complemental strand, 17474961 - 17474707
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| |||||||||||||| ||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||  ||| | |||||||    
T  17474961 cggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacaatttttcaaggtaa 17474862  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||  ||||||||||||||||| ||||||||||||||  ||||        ||||||| |||| |||||||| |||||||||||| ||  ||||||    
T  17474861 aacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactc 17474762  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    | ||  || |||| || | ||||||||| ||||||| ||||||||||||||||||    
T  17474761 tcataattctgttatgcggcattgttacctgttcttcgtcaaaaatcgggttttc 17474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 526
Target Start/End: Complemental strand, 17474655 - 17474575
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17474655 ttcaaggaccatgactcccttagaagaaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 17474575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 296 - 426
Target Start/End: Complemental strand, 19110022 - 19109892
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| || | ||||||| ||| ||||||||| ||  ||||||| |||||||| ||||||||||||||||  ||||||||||||||||||  |||||     
T  19110022 taacatggatcgtcattttaaggataatattaatcttcctaactctcatccttttattttgggtcattgttagctgttcttagtcaaaaatccagttttt 19109923  T
Q  396 gggctacttgatcggattgctctgaaacttc 426  Q
    || ||||||||||||||||||| ||||||||    
T  19109922 ggactacttgatcggattgctccgaaacttc 19109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 376 - 526
Target Start/End: Original strand, 27670723 - 27670873
Alignment:
Q  376 tagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggac 475  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||                ||||| |||||||||||||||||||| |||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctccgaaactttcccataaaatcagaaaaaattcaacgaccatgactcccttagaagagac 27670822  T
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
     ||||| |||||||| ||||||||||| ||||||||||| |||||||||||    
T  27670823 ctcttatgggactccgcccctcaaaattcaaaattccatcgtttagaccca 27670873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 33366879 - 33366996
Alignment:
Q  109 gaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggatt 208  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||  |||  | |||||||||| ||||||||||    
T  33366879 gaatggtattttcctttgttatagggtgaaaaatggagttgcggattttgtaatccgaaaacttcaaaaataaga-cgcgttacatgatatttccggatt 33366977  T
Q  209 acatgatccggaaaccccc 227  Q
    |||| ||||| ||||||||    
T  33366978 acataatccgaaaaccccc 33366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 304 - 429
Target Start/End: Complemental strand, 16750427 - 16750303
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||||| ||||||||||| ||  ||||||| |||||| ||||||||||||||||||  |||||||||| ||||||||| ||||||| |||||    
T  16750427 atagtcattttaggaacaatattaatcttc-taactctcatccttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactact 16750329  T
Q  404 tgatcggattgctctgaaacttcccc 429  Q
    |||||||||||  | |||||||||||    
T  16750328 tgatcggattgtaccgaaacttcccc 16750303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 35251085 - 35251206
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    ||||||| |||| |||| |||||||| ||  |||||| ||||||| | |||| ||||||||||| |||||||||||| |||||| |||||||||||||||    
T  35251085 atagccagtttaaggaccatattaatcttcttaactcctatccttctattttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctact 35251184  T
Q  404 tgatcggattgctctgaaactt 425  Q
    ||||| |||||||| |||||||    
T  35251185 tgatcagattgctccgaaactt 35251206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 337 - 526
Target Start/End: Complemental strand, 38065543 - 38065354
Alignment:
Q  337 actcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnn 436  Q
    ||||| || ||| |||||||||| |||||||| |||||||||| ||||||  | ||||| ||||| ||||||||||||||| ||||||| |||           
T  38065543 actctcattcttctgttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctccgaaactttcccataaaat 38065444  T
Q  437 nnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
             |||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  38065443 cagaaaaaattcaaggatcatgactcctgtagaagagacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagaccca 38065354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 38066868 - 38066687
Alignment:
Q  117 ttttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatc 216  Q
    ||||| |||||||||| ||||||||  || ||| ||||||||||||||| |||||||||||||||| |||||||| ||||| ||| |||||||||| | |    
T  38066868 ttttcttttgttatagtgtgaaaaaatgagttatggattttataatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacc 38066769  T
Q  217 cggaaacccccaaacaccctttcttaa-ggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaata 297  Q
    |  | ||||  |||||||| || | || || |||| |||||| ||||||||| ||||||||||| | ||||||| |||||||    
T  38066768 caaacacccataaacaccccttttcaagggaaaaacagttcatattatataaaccgaacagtattaacacaaattctaaata 38066687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 247 - 407
Target Start/End: Original strand, 8388741 - 8388909
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataac 338  Q
    |||| ||||||||||||||| ||||||  |||||||||||||| |||||        ||||||| || ||||| ||| ||||||||||||| ||  ||||    
T  8388741 aaaacagttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaac 8388840  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgat 407  Q
    ||| ||||||  ||||||||||||||||   ||||||||||| ||||||||||||||| ||||||||||    
T  8388841 tctcatccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 304 - 526
Target Start/End: Original strand, 30763804 - 30764027
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||| ||||||||||||| ||  ||||||| ||| || |||||| |||||||||||  |||||||||||||||||| | |||| |||| |||    
T  30763804 atagtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaact 30763903  T
Q  404 tgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnt-tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaat 502  Q
    |||||||||||||| ||||||||| |                  |||| || || ||||| | ||||||||||||||||||||||||| |||||||||||    
T  30763904 tgatcggattgctccgaaacttcctcagaaaatcagaaaaaaaatcaaagatcaagactctcatagaagggacttcttacgggactccgcccctcaaaat 30764003  T
Q  503 ccaaaattccattgtttagaccca 526  Q
    |||||||| ||| || ||||||||    
T  30764004 ccaaaatttcatcgtctagaccca 30764027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 322 - 425
Target Start/End: Original strand, 45293813 - 45293916
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  ||||||| ||| || |||||| |||||||| || ||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  45293813 atattaatcttcctaactctcatctttctgttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaa 45293912  T
Q  422 actt 425  Q
    ||||    
T  45293913 actt 45293916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 4268400 - 4268299
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccc-caaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||  |||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||  ||||||||||| | |||||||    
T  4268400 cggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaa 4268301  T
Q  249 aa 250  Q
    ||    
T  4268300 aa 4268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 429
Target Start/End: Original strand, 42478906 - 42479023
Alignment:
Q  312 tttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcgga 411  Q
    |||| |||| |||||||| ||  ||||||| |||||| |||||| |||||||||||   ||||| ||||||||||   ||||||||||||||||||| ||    
T  42478906 tttaaggaccatattaatcttcctaactctcatccttatgttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcaga 42479005  T
Q  412 ttgctctgaaacttcccc 429  Q
    ||||||||||||||||||    
T  42479006 ttgctctgaaacttcccc 42479023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 26228239 - 26228346
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  ||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||  ||||||| ||||||||||| ||||  || |||    
T  26228239 atattaatcttgctaactctcatccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagattcgtccgaa 26228338  T
Q  422 acttcccc 429  Q
    ||||||||    
T  26228339 acttcccc 26228346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 296 - 422
Target Start/End: Complemental strand, 37773823 - 37773696
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggt-ttt 394  Q
    ||||||| ||||||| |||| |||| || ||||| ||| ||||||| |||||| |||||| | ||||||||| |||||||||||||||| ||  || |||    
T  37773823 taacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtccagtattt 37773724  T
Q  395 cgggctacttgatcggattgctctgaaa 422  Q
     ||||||||||||| |||||||||||||    
T  37773723 tgggctacttgatcagattgctctgaaa 37773696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 32187714 - 32187661
Alignment:
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32187714 gacttcttacgggactccacccctcaaaatccaaaattccatcgtttagaccca 32187661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 466 - 524
Target Start/End: Original strand, 39447474 - 39447532
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  39447474 tagaagggacttcttacgggactccgcccctcaaaatccaaaattacatcgtttagacc 39447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 425
Target Start/End: Complemental strand, 13704770 - 13704690
Alignment:
Q  345 ccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    |||| |||||| ||| ||||||| ||||| | ||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  13704770 ccttctgttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaactt 13704690  T

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Target: chr2; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 17133034 - 17133102
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||| ||||| ||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  17133034 gactcccttagaagagactttttacgggactccgaccctcaaaatccaaaatttcatcgtttagaccca 17133102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 16750274 - 16750221
Alignment:
Q  473 gacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  16750274 gacttcctacaggactccgcccctcaaaatccaaaattccatcgtttagaccca 16750221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 33440344 - 33440291
Alignment:
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    |||||||||||||||||||||| || |||||||| ||||||||||| |||||||    
T  33440344 aagggacttcttacgggactccgcctctcaaaattcaaaattccatcgtttaga 33440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 9847150 - 9847084
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||||||||| ||||  |||||||||    
T  9847150 gactcccttagaagagacttcttacgggactcc-gctctcaaaatccaaaatcccatcatttagaccc 9847084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 524
Target Start/End: Original strand, 11457264 - 11457327
Alignment:
Q  461 tcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||| |||||||||||||||||| ||||||  ||||||||||  |||||||||| |||||||||    
T  11457264 tcccatagaagggacttcttacgagactccgtccctcaaaatttaaaattccatcgtttagacc 11457327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 425
Target Start/End: Original strand, 33833845 - 33834027
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaa-----ataacatgtatagccattttagggacaatattaatatttataactct 341  Q
    |||| ||||||||||||||||||||||| |||||| |||||||  | |      || |||| |||||||  ||| |||| |||||||| ||| ||||||     
T  33833845 aaaacagttcagattatataatccgaactgtatcatcacaaattatgagcatgttagcatggatagccagattaaggaccatattaatgtttctaactc- 33833943  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
     |||||| |||||| |||||||||||   |||     |||||||||  |||||| |||||||||||||||||||| ||||||||    
T  33833944 catccttctgttttaggtcattgttagccgttgccgatcaaaaatccagttttcaggctacttgatcggattgctttgaaactt 33834027  T

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Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 522
Target Start/End: Complemental strand, 24477102 - 24477052
Alignment:
Q  472 ggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    ||||||||||||||||| ||||||||||||||||||| | ||| |||||||    
T  24477102 ggacttcttacgggacttcacccctcaaaatccaaaacttcatcgtttaga 24477052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 524
Target Start/End: Original strand, 25715770 - 25715835
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||||||| || |||||| |||||||| ||| |||||||||||||||||||  ||||||||    
T  25715770 gactcccttagaagagatttcttatgggactccgccc-tcaaaatccaaaattccatcatttagacc 25715835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 425
Target Start/End: Complemental strand, 32069242 - 32069116
Alignment:
Q  299 catgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcggg 398  Q
    |||| ||||||| |||| |||| |||||| | ||  || |||| || ||| |||||| |||||||| ||  |||||| | |||||||||  |||||| ||    
T  32069242 catggatagccaatttaaggaccatattagtcttcctagctctcatacttatgttttaggtcattgatagatgttctcactcaaaaatcttgttttcagg 32069143  T
Q  399 ctacttgatcggattgctctgaaactt 425  Q
    |||||| ||| ||||||||||||||||    
T  32069142 ctacttaatcagattgctctgaaactt 32069116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 526
Target Start/End: Complemental strand, 41203036 - 41202966
Alignment:
Q  456 atgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| | |||||| |||| ||||| ||||||| ||| ||||||||||||||| ||| |||||||||||    
T  41203036 atgactctcgtagaagagactccttacaggactccgcccatcaaaatccaaaatttcatcgtttagaccca 41202966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 45293938 - 45294000
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||||| |||||||||||||||   ||||| ||||||||||||||||||||| ||| |||||    
T  45293938 gactcccctagaagggacttcttgttggacttcacccctcaaaatccaaaatttcatcgttta 45294000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 9847675 - 9847606
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||||| ||||||| |||| ||||||| |||||||||||||| |||||  ||||||| || ||||||||    
T  9847675 caaaaatgcctttgaagtttccggattttataatctggaatggcatttttctttgttaaagagtgaaaaa 9847606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 25715267 - 25715336
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    ||||||| || |||| |||| ||||||| |||||| |||||||| ||||| ||||||| |||||||||||    
T  25715267 caaaaatgcccttgaagtttccggattttataatccggaatggtgttttcctttgttaaagggtgaaaaa 25715336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 9847358 - 9847303
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccat 514  Q
    |||| ||||||||| |||||||||||||||| |  ||||||||||||||||||||||    
T  9847358 gacttccttagaagagacttcttacgggact-ctgccctcaaaatccaaaattccat 9847303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 8388980 - 8389019
Alignment:
Q  487 ctccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  8388980 ctccacccttcaaaatccaaaattccatcgtttagaccca 8389019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 448 - 526
Target Start/End: Original strand, 35251231 - 35251309
Alignment:
Q  448 caaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| || ||||||| ||||| | |||||||| |  ||||| ||||| ||||||||||||| ||| |||||||||||    
T  35251231 caaggatcaagactcccatagaaagtacttcttatgaaactccgccccttaaaatccaaaatttcatcgtttagaccca 35251309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 526
Target Start/End: Complemental strand, 36948852 - 36948810
Alignment:
Q  484 ggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||    
T  36948852 ggactccgcccttcaaaatcctaaattccattgtttagaccca 36948810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 408
Target Start/End: Complemental strand, 27900622 - 27900509
Alignment:
Q  295 ataacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggtttt 394  Q
    |||||||| ||| ||| |||| |||| |||||||| ||  ||||||| |||||| ||||||   ||||||||  ||||||||||| ||||||   |||||    
T  27900622 ataacatggataaccagtttaaggaccatattaattttcttaactctcatccttctgttttatatcattgttgattgttcttagtaaaaaattcagtttt 27900523  T
Q  395 cgggctacttgatc 408  Q
     |||||| ||||||    
T  27900522 tgggctatttgatc 27900509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 524
Target Start/End: Complemental strand, 3958685 - 3958657
Alignment:
Q  496 tcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||||||||||||||||||||||    
T  3958685 tcaaaatccaaaattccattgtttagacc 3958657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 32069095 - 32069031
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattc 511  Q
    ||||||| |||||||| | ||| || |||||||||| || ||||  |||||||||||||||||||    
T  32069095 tcaaggatcatgactctcctagtagtgacttcttacaggtctccgtccctcaaaatccaaaattc 32069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 429
Target Start/End: Complemental strand, 33440503 - 33440384
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||| ||| ||||||||| ||| |||| || |||||| |||||||||||||||||   ||||| | || ||||||  |||| || | |||||||| |    
T  33440503 cattttaaggataatattaatctttctaac-ctcatccttctgttttgggtcattgttcactgttcatggtaaaaaatacggttatcagactacttgacc 33440405  T
Q  409 ggattgctctgaaacttcccc 429  Q
     | |||||| |||||||||||    
T  33440404 aggttgctccgaaacttcccc 33440384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 34817345 - 34817377
Alignment:
Q  393 ttcgggctacttgatcggattgctctgaaactt 425  Q
    |||||||||||||||| ||||||||||||||||    
T  34817345 ttcgggctacttgatctgattgctctgaaactt 34817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 42604855 - 42604803
Alignment:
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||| |||||||||| | ||||| ||||||||||||| ||| |||||||||||    
T  42604855 actttttacgggacttcgccccttaaaatccaaaatttcatcgtttagaccca 42604803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 6e-88; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 93 - 526
Target Start/End: Complemental strand, 2813460 - 2813004
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta------------taatccggaaacttcaaaaaat 180  Q
    |||||||||||||  |||||||| ||||| ||| ||||||||||||||||||| |||| ||||||             ||||||||||||||||||||||    
T  2813460 cggatttcataattcggaatggtgttttcctttattatagggtgaaaaatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaat 2813361  T
Q  181 agagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtat 279  Q
    |  ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||  |||| || |||||||||||||| ||||    
T  2813360 aaggtgtgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacggttcgga-tatataatccgaactgtat 2813262  T
Q  280 cagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttg-ttttgggtcattgttactt 370  Q
    || ||||||| |||||        ||||||| |||| ||||||| ||| ||||||||| ||  ||||||| ||||||  | ||||||||||||||||| |    
T  2813261 caccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttccgtttttgggtcattgttacct 2813162  T
Q  371 gttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc--nnnnnnnnnnnnnnnnttcaaggaccatgactcccttag 468  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||                  |||||||||||||||||||||||    
T  2813161 gttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaaattcaaggaccatgactcccttag 2813062  T
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    || |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  2813061 aatggacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagaccca 2813004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 72 - 520
Target Start/End: Original strand, 5638783 - 5639232
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggattttataatccggaaact 171  Q
    ||||||| || ||||||||| |||||||||||||| |||||||| ||||| | |||||||||||||||||| || |||||||||||    ||||||   |    
T  5638783 caaaaatgcccttgaggtttccggatttcataatccggaatggtgttttcctctgttatagggtgaaaaatagagttacggatttt----tccgga---t 5638875  T
Q  172 tcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatcc 270  Q
    |  |||||||| | | ||||||||||||||||||||||||| ||  | |||  ||| ||||||||||| | ||||||||| ||||| |||||||||||||    
T  5638876 tttaaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaacagttcggattatataatcc 5638975  T
Q  271 gaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcat 362  Q
    |||| ||||||||||| ||| ||||        |||||| |||||||||| |||||||||||||||| ||  |||||||||||||||||||||| |||||    
T  5638976 gaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactcttatccttttgttttgagtcat 5639075  T
Q  363 tgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactc 462  Q
    |||||| |||||||| ||||||||||||||| ||||||||||| || |||||||||||||||| |||                |||||||||||||||||    
T  5639076 tgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactttccc-aaaaaatcagaaaaattcaaggaccatgactc 5639174  T
Q  463 ccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    | ||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  5639175 ctttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgttta 5639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 150 - 526
Target Start/End: Complemental strand, 4508469 - 4508084
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    ||||||||||||||| |||| |||||||| ||| | |||||||||||||||||||||||| || ||||||||| |||| ||||| | ||| | |||||||    
T  4508469 cggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccggaaatcccctaaacaacttttttcaaggtaa 4508370  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| |||||||||||| |||| |||||||||||||| |||||        ||| ||| |||| ||||||||||||||||||||| ||  |||||     
T  4508369 aacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactt 4508270  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |               
T  4508269 tcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttccgcagaaaatcaga 4508170  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
         |||||||||||||||||||  ||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  4508169 aacaattcaaggaccatgactcccacagaagagacttcttaagggactccgcccctcaaaatccaaaattccatcgtttagaccca 4508084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 153 - 526
Target Start/End: Complemental strand, 3717447 - 3717064
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| |||||||||||||||||||| ||| | | |||||||||||||||||||||| || ||| ||||||| || ||||||  ||| | |||||||||     
T  3717447 attttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctggaaacctcctaaacacaatttttcaaggtaaaac 3717348  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| ||||||||||||||||| |||||| ||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||| ||||||| |    
T  3717347 agttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctca 3717248  T
Q  344 tccttttgtttt-gggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||                 
T  3717247 tccttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccaaaaaatcagaaa 3717148  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
       ||||||||||||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  3717147 aaattcaaggaccatggctcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccactgtttagaccca 3717064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 150 - 522
Target Start/End: Original strand, 17264402 - 17264782
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||| |||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||    
T  17264402 cggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaa 17264501  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    |||||||| |||||||||||| |||| |||||||||||||| |||||         ||||||  ||| |||||||||||||||||| || ||  ||||||    
T  17264502 aatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcattttagggacaatatttatcttcctaactc 17264601  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||| ||||||||||| |||||||||| |||||| | ||||| |||||||||||| ||||||||| |||||||||||               
T  17264602 tcatccttctgttttgcgtcattgttacctgttcttagttaaaaattgagtttttgggctacttgatgggattgctccgaaacttcccc-agaaaatcag 17264700  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
         ||||||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||    
T  17264701 aaaaattcaaggaccatgactcccctagaagggacttcttacgggacttcgtccctcaaaatccaaaatttcatcgtttaga 17264782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 88 - 429
Target Start/End: Original strand, 5699478 - 5699846
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaa 177  Q
    |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||          ||||| |||||||||||||| ||||    
T  5699478 gtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggttttttcgaattttgtaatccggaaacttgaaaa 5699577  T
Q  178 aatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagatt-------atataatc 269  Q
    ||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||| | ||||||||||       ||||||||    
T  5699578 aatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaatacagttcagatttcagattatataatc 5699677  T
Q  270 cgaacagtatcagcacaaatcctaaata--------acatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtc 360  Q
    ||||| |||| | ||||||| |||||||        ||||| |||| ||||||| ||||||||||||| || |||||||| |||||| |||||| |||||    
T  5699678 cgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttctgtttttgggtc 5699777  T
Q  361 attgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||||||| | ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  5699778 attgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttcccc 5699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 93 - 429
Target Start/End: Original strand, 23406721 - 23407077
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taatccggaaacttcaaaaaatag 182  Q
    |||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||  ||||           ||||||||||||||||||||||||    
T  23406721 cggatttcgtaatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatag 23406820  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
     | | ||||  ||||||||| ||||||||| |||||||||||||| ||||||| ||| | ||||||||| |||||  |||||||||||||||| ||||||    
T  23406821 ggcgcgttagttgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgaattatataatccgaactgtatca 23406920  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgtttt-gggtcattgttacttgt 372  Q
    |||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||  ||||| |||||||| ||||||||    
T  23406921 gcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattattacttgt 23407020  T
Q  373 tcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||||||||||||||  ||||||||||||||||||  |||||||| |||||||||||    
T  23407021 tcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttcccc 23407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 150 - 520
Target Start/End: Complemental strand, 14587727 - 14587349
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaa 248  Q
    |||||||| ||||||| |||||| ||||||||| | | |||||||||||||||| |||||||| ||||  |||||||| ||||||| ||| | |||||||    
T  14587727 cggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatccataaaccccctaaacaccatttttcaaggtaa 14587628  T
Q  249 aatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactc 340  Q
    || ||||| ||||||||||||  ||| ||||| |||||||| |||||        ||||||| |||| ||||||| ||||||||||||| ||  ||||||    
T  14587627 aacagttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaactc 14587528  T
Q  341 ttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnn 440  Q
    | |||||| ||||||||||||||||||| |||||||||| |||||  || |||| |||||||||||| ||||||||  ||||||| |||               
T  14587527 taatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggatttttgggctacttgattggattgcttcgaaactt-cccagaaaattaga 14587429  T
Q  441 nnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
         ||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  14587428 aaaaattcaaggaccaagactcccttagaaggaacttcttacgggactccgccactcaaaatccaaaattccattgttta 14587349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 203 - 523
Target Start/End: Original strand, 2539496 - 2539825
Alignment:
Q  203 cggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa------ 295  Q
    |||||||||| ||| |||||||||| ||||||||||| | ||||||||| ||||| |||||||||||||||||  |||| |||||||| || ||          
T  2539496 cggattacataatctggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactctatccgcacaaattctgaacatgtt 2539595  T
Q  296 --taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttt 393  Q
      ||||||| |||| ||||||||||||||||||||| ||  ||||||| |||||| ||||||||||||||||||| | ||| |||| ||||| || ||||    
T  2539596 tgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagttt 2539695  T
Q  394 tcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacc 493  Q
    |||| ||||||||||||||||||| ||||||| |||                ||||||||||||||||| | |||||| |||||||||||||||||| ||    
T  2539696 tcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactctcatagaagtgacttcttacgggactccgcc 2539795  T
Q  494 cctcaaaatccaaaattccattgtttagac 523  Q
    |||||||||||||||||| || ||||||||    
T  2539796 cctcaaaatccaaaattcaatcgtttagac 2539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 72 - 295
Target Start/End: Original strand, 32035017 - 32035246
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacggatttta----------taa 161  Q
    |||||||||  ||||||||||||||||||||||||||||||| | ||||| ||||||||| | ||||||||||| |||||||||||           |||    
T  32035017 caaaaatactcttgaggttttcggatttcataatctggaatgatgttttcttttgttatatgatgaaaaatggagttacggatttttccggattttgtaa 32035116  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  32035117 tccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaatagttcggat 32035216  T
Q  261 tatataatccgaacagtatcagcacaaatcctaaa 295  Q
    ||||||||     | ||||||||||||||||||||    
T  32035217 tatataat-----ctgtatcagcacaaatcctaaa 32035246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 296 - 526
Target Start/End: Complemental strand, 21515043 - 21514813
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||| ||||||||||||||||||||| ||  ||||||| |||||| |  |||||||||||||||| |||||||||||||||||||| |||||    
T  21515043 taacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtcaaaaatcggattttc 21514944  T
Q  396 gggctacttgatcggattgctctgaaacttcccc-nnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccaccc 494  Q
    || ||||||||||||||||||| |||||||||||                 |||||||| ||| |||||||||||||||||||||||||||||||| |||    
T  21514943 ggactacttgatcggattgctccgaaacttccccataaaattagaaaaaaattcaaggatcat-actcccttagaagggacttcttacgggactccgccc 21514845  T
Q  495 ctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||||||| |||||||||||    
T  21514844 ctcaaaatccaaaattccatcgtttagaccca 21514813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 150 - 426
Target Start/End: Complemental strand, 1945696 - 1945412
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaa 249  Q
    |||||||| ||||||| |||||||||||| ||| ||| ||||||| |  ||||||||||| || ||| | | ||||| |||| || ||| | |||  |||    
T  1945696 cggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctgaacacccctaaaccccatttttcaagtgaaa 1945597  T
Q  250 atagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactct 341  Q
    | | ||||||||||||||||||||| ||||| |||||||| |||||        ||||||| |||| ||||||||||| ||||||||| ||  |||||||    
T  1945596 acaattcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactct 1945497  T
Q  342 tatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttc 426  Q
     |||||| ||||||||| ||||||||| |||| ||| ||||||||||| |||||||| || |||||||||||||  |||||||||    
T  1945496 catccttctgttttgggacattgttacctgtttttattcaaaaatcggattttcgggttatttgatcggattgccttgaaacttc 1945412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 153 - 525
Target Start/End: Complemental strand, 24604526 - 24604144
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| ||||||  |||||||||||||||| | || ||||||||| | | |||||||||| ||||| | |||||  ||||||| ||| | |||| ||||     
T  24604526 attttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacaccccttaaacaccatttttcaagggaaaaa 24604427  T
Q  252 -agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
     |||||| ||||||||||| ||||  ||||||||||||| |||||        |||||   |||| |||||||| |||||||||||| ||  ||||| |     
T  24604426 cagttcatattatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttc 24604327  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnn 442  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||   |||| ||||                  
T  24604326 atccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggtttttgggctacttgatcacattgcttctaaacatccctagaaaataaaaaa 24604227  T
Q  443 nnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
       |||||||| |||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||||  ||||||||||    
T  24604226 aaattcaaggatcatgactcccttagaagggacttcttgcggaactccgcctctcaaaatccaaaattccaccgtttagaccc 24604144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctact 32044636  T
Q  404 tg 405  Q
    ||    
T  32044637 tg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 296 - 426
Target Start/End: Original strand, 9905261 - 9905392
Alignment:
Q  296 taacatgtatagccattttaggga-caatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggtttt 394  Q
    ||||||| |||  ||||||||||| |||||||||| ||  | |||||||||||| ||||||| |||||||||||   |||||||||||||||||||||||    
T  9905261 taacatggataatcattttagggaacaatattaattttccttactcttatccttctgttttgagtcattgttaccaattcttagtcaaaaatcgggtttt 9905360  T
Q  395 cgggctacttgatcggattgctctgaaacttc 426  Q
    ||||||||||||||||||||||| ||||||||    
T  9905361 cgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 72 - 261
Target Start/End: Complemental strand, 33413601 - 33413402
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattac----------ggattttataa 161  Q
    ||||||| ||||||| |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||          | ||||| |||    
T  33413601 caaaaatgcctttgatgtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgaatttttctgaattttgtaa 33413502  T
Q  162 tccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaatagttcagat 260  Q
    |||||||||||| |||||||| | | |||||||||||||||| |||||||| ||| |||||||||| ||||| ||||| | ||||||||| ||||| |||    
T  33413501 tccggaaacttc-aaaaatagggcgcgttacatgatgtttccagattacataatctggaaaccccctaaacaacctttttcaaggtaaaacagttcggat 33413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 7412820 - 7412920
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccccaaacaccctttcttaaggtaaa 249  Q
    |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| | ||||||||    
T  7412820 cggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggattacataatccgaaaacccctaaacaccctttttcaaggtaaa 7412919  T
Q  250 a 250  Q
    |    
T  7412920 a 7412920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 252 - 427
Target Start/End: Original strand, 29519374 - 29519557
Alignment:
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| |||||||||||  |||| |||||||||||||| |||||        ||||||| || | ||||||| ||| ||||||||| ||  ||||| | |    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  344 tccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcc 427  Q
    ||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||  ||||||| |||||||||    
T  29519474 tccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcc 29519557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 309 - 425
Target Start/End: Complemental strand, 13801026 - 13800910
Alignment:
Q  309 cattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatc 408  Q
    ||||||| | ||||||||||| ||  ||||||| ||| || |||||||||||||||||| ||||||||||||||||||||| |||| |  ||||||||||    
T  13801026 cattttatgaacaatattaatcttcctaactctcatcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatc 13800927  T
Q  409 ggattgctctgaaactt 425  Q
    ||||||||| |||||||    
T  13800926 ggattgctccgaaactt 13800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 310 - 429
Target Start/End: Complemental strand, 29289623 - 29289504
Alignment:
Q  310 attttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcg 409  Q
    |||||| ||||||||||||| ||  ||||||  |||||| |||||| |||||||||||  |||||||||||||||||| |||||||| |||||||||||     
T  29289623 attttatggacaatattaattttcctaactcgcatccttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatca 29289524  T
Q  410 gattgctctgaaacttcccc 429  Q
     ||||||| |||||||||||    
T  29289523 aattgctccgaaacttcccc 29289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 296 - 427
Target Start/End: Original strand, 34528587 - 34528718
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| |||  ||||| | ||| ||||||||| ||| ||||||| || ||| |||||||||||||| |||  |||||||||||||||||| |||||||    
T  34528587 taacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcattattagctgttcttagtcaaaaatctggttttc 34528686  T
Q  396 gggctacttgatcggattgctctgaaacttcc 427  Q
    || |||||||||||||||||||  ||||||||    
T  34528687 ggtctacttgatcggattgctccaaaacttcc 34528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 237096 - 237173
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||||||||| || ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  237096 tcaaggaccaagaatcccttagaagggtcttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 237173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 247 - 413
Target Start/End: Complemental strand, 7734395 - 7734221
Alignment:
Q  247 aaaatagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataac 338  Q
    |||| ||||||||||||||||| ||||| ||||||  |||||| |||||        ||||| | || | ||||||| ||||||||||||| ||  ||||    
T  7734395 aaaacagttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaac 7734296  T
Q  339 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggatt 413  Q
    | | ||||||||||||||| |||||||||  |||||||  ||||||||| |||||||||||||||||||| ||||    
T  7734295 tatcatccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 417
Target Start/End: Complemental strand, 14037930 - 14037856
Alignment:
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 417  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  14037930 atccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctc 14037856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 524
Target Start/End: Original strand, 5699918 - 5699973
Alignment:
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  5699918 aaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 5699973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 524
Target Start/End: Original strand, 9905388 - 9905438
Alignment:
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  9905388 acttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 9905438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 425
Target Start/End: Original strand, 16450361 - 16450490
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttc 395  Q
    ||||||| ||| ||| |||| |||  |||||||| ||  ||| ||| ||| || |||||| |||||||||||  |||||||||||||||||  ||||||     
T  16450361 taacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttggttttt 16450460  T
Q  396 gggctacttgatcggattgctctgaaactt 425  Q
    ||||||||||||| |||||||  |||||||    
T  16450461 gggctacttgatcagattgcttcgaaactt 16450490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 525
Target Start/End: Complemental strand, 1945416 - 1945365
Alignment:
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  1945416 acttcttacgggactccgcccctcaaaatccaaaattccaacgtttagaccc 1945365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 429
Target Start/End: Complemental strand, 33413408 - 33413365
Alignment:
Q  386 tcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  33413408 tcggattttcgggctacttgatcggattgctctgaaacttcccc 33413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 7412971 - 7413028
Alignment:
Q  370 tgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcc 427  Q
    ||||||||| |||||||| ||||||||| ||| ||||||||||||||| |||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttcc 7413028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 425
Target Start/End: Original strand, 3365838 - 3365941
Alignment:
Q  322 atattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaa 421  Q
    |||||||| ||  ||||| | |||||| |||||| ||||||||||| ||||||  | ||||||||| ||||||| || |||||||||  ||||||| |||    
T  3365838 atattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggttttcaggttacttgatcatattgctccgaa 3365937  T
Q  422 actt 425  Q
    ||||    
T  3365938 actt 3365941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 426
Target Start/End: Complemental strand, 6704122 - 6704009
Alignment:
Q  312 tttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcgga 411  Q
    |||| ||||||||||||| ||  ||||||| ||| ||   |||| |||||||||||  ||||  | |||||||||| ||||||||| ||| |||||| ||    
T  6704122 tttaaggacaatattaatcttcctaactctcatcattcgattttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcaga 6704024  T
Q  412 ttgctctgaaacttc 426  Q
    |||||||||||||||    
T  6704023 ttgctctgaaacttc 6704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Original strand, 16450533 - 16450593
Alignment:
Q  464 cttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagacc 524  Q
    |||| |||||||| |||| | |||||| ||| ||||||||||||||||||| |||||||||    
T  16450533 cttaaaagggactacttatgagactccgcccatcaaaatccaaaattccatcgtttagacc 16450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 32044887 - 32044847
Alignment:
Q  72 caaaaatacctttgaggttttcggatttcataatctggaat 112  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  32044887 caaaaatgcccttgaggttttcggatttcataatctggaat 32044847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 522
Target Start/End: Complemental strand, 4655722 - 4655647
Alignment:
Q  447 tcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttaga 522  Q
    ||||||| || ||||||  ||||| | ||||||||||||||| |  || |||||||||||||||| ||||||||||    
T  4655722 tcaaggatcaagactcctgtagaaagtacttcttacgggacttcgtccttcaaaatccaaaattcaattgtttaga 4655647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 525
Target Start/End: Original strand, 17501297 - 17501363
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||| ||||||||||||| ||||||||||||  || ||||||||||||||| ||| ||||| ||||    
T  17501297 gactcctttagaagggactttttacgggactcc-gccatcaaaatccaaaatttcatcgtttacaccc 17501363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 526
Target Start/End: Original strand, 7413086 - 7413144
Alignment:
Q  468 gaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||| ||||||||| | || ||| ||||||||||||||||||| ||| |||||||||||    
T  7413086 gaagtgacttcttaggtgattccgcccctcaaaatccaaaatttcatcgtttagaccca 7413144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 21517630 - 21517572
Alignment:
Q  168 aacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaacccc 226  Q
    |||| |||||||||| | ||| ||||| ||||||||||||||||| || ||||||||||    
T  21517630 aactccaaaaaatagggcgtgctacataatgtttccggattacataattcggaaacccc 21517572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 3717522 - 3717469
Alignment:
Q  88 gttttcggatttcataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    |||| ||||||| ||||||| ||||||| ||||| ||||||| |||||||||||    
T  3717522 gtttccggattttataatcttgaatggtgttttcttttgttaaagggtgaaaaa 3717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 9905110 - 9905187
Alignment:
Q  150 cggattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc 227  Q
    |||||||| |||| |||||| |||||||||||| | | | ||| |||| |||||||||||||| ||||| | ||||||    
T  9905110 cggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccc 9905187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 13800870 - 13800817
Alignment:
Q  459 actcccttagaagggacttcttacgggactccacccctcaaaatccaaaattcc 512  Q
    ||||||||||||| | ||||||| |||| ||||||||| |||||| ||||||||    
T  13800870 actcccttagaagaggcttcttatgggaatccacccctgaaaatctaaaattcc 13800817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 523
Target Start/End: Complemental strand, 29630806 - 29630749
Alignment:
Q  466 tagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||| ||||||||| ||||| |  ||||||||||||||||||| ||| ||||||||    
T  29630806 tagaagagacttcttatgggaccctgcccctcaaaatccaaaatttcatcgtttagac 29630749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 520
Target Start/End: Complemental strand, 14037801 - 14037753
Alignment:
Q  472 ggacttcttacgggactccacccctcaaaatccaaaattccattgttta 520  Q
    ||||||||||||||||||  | ||||||||||||| ||||||| |||||    
T  14037801 ggacttcttacgggactctgctcctcaaaatccaacattccatcgttta 14037753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 14587786 - 14587746
Alignment:
Q  101 ataatctggaatggtattttcgtttgttatagggtgaaaaa 141  Q
    |||||||||||| |||||||| ||||||| |||||||||||    
T  14587786 ataatctggaattgtattttcttttgttaaagggtgaaaaa 14587746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 153; Significance: 9e-81; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 93 - 526
Target Start/End: Complemental strand, 9731 - 9280
Alignment:
Q  93 cggatttcataatctggaatggtattttcgtttgttatagggtgaaaaatggaattacgg----------attttataatccggaaacttcaaaaaatag 182  Q
    |||||||||||||  ||||| || ||||| |||||||||||||||||||| || ||||||          ||||| ||||||||||||||||||||||||    
T  9731 cggatttcataattcggaattgtgttttcctttgttatagggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaatag 9632  T
Q  183 agtgtgttacatgatgtttccggattacatgatccggaaaccccca-aacaccctttcttaaggtaaaatagttcagattatataatccgaacagtatca 281  Q
       | ||||||||||||||||||||||||| ||||| ||||||||  |||||||||| | || |||||| ||||| ||||||||||||||||| ||||||    
T  9631 gacgcgttacatgatgtttccggattacataatccgaaaaccccctgaacaccctttttcaaagtaaaacagttcggattatataatccgaactgtatca 9532  T
Q  282 gcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgtt 373  Q
    ||| |||| ||| |        ||||||| |||| ||||||| ||||||||||||||||||||||| | ||| || ||||||||||||||||||| ||||    
T  9531 gcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttcatcattctgttttgggtcattgttacatgtt 9432  T
Q  374 cttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccnnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaaggg 473  Q
    |||||| ||||||||| |||||||  |||||||||||||||||||||||||| ||                 |||||||||| |||||||||||||| ||    
T  9431 cttagttaaaaatcggattttcggattacttgatcggattgctctgaaacttgcctagaaaatcagagaaaattcaaggaccttgactcccttagaa-gg 9333  T
Q  474 acttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    ||||||||||||||||| ||||||||||| |||||| |||| |||||||||||    
T  9332 acttcttacgggactccgcccctcaaaattcaaaataccatcgtttagaccca 9280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 148; Significance: 9e-78; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 153 - 526
Target Start/End: Complemental strand, 3559 - 3175
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaat 251  Q
    ||||| |||||  ||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||  ||||||||||| | |||||||||     
T  3559 attttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaaaac 3460  T
Q  252 agttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctta 343  Q
    ||||| |||||||||||| |||| ||||| || ||||| |||||        ||||||  |||  ||||||||||||||||||||| ||  ||||||| |    
T  3459 agttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctca 3360  T
Q  344 tccttttgttttgggtcattgttacttgttcttagt-caaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc-nnnnnnnnnnnn 441  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||||||||||                 
T  3359 tccttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaa 3260  T
Q  442 nnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
        || |||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  3259 aaaatttaaggaccatgacccccttagaagggacttcttatgggaccccacccctcaaaatccaaaattccatcgtttagaccca 3175  T

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Target: scaffold0027 (Bit Score: 146; Significance: 1e-76; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 152 - 429
Target Start/End: Complemental strand, 142128 - 141843
Alignment:
Q  152 gattttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc-aaacaccctttcttaaggtaaaa 250  Q
    |||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  142128 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 142029  T
Q  251 tagttcagattatataatccgaacagtatcagcacaaatcctaaa--------taacatgtatagccattttagggacaatattaatatttataactctt 342  Q
    | ||| |||||||||||||||||| |||||||||||||| |||||        ||||||| |||| ||||||||||||||||||||| ||  ||||||      
T  142028 ttgttgagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactccc 141929  T
Q  343 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 429  Q
    |||||| || |||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  141928 atccttctg-tttgggtcattgttgcatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttcccc 141843  T

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Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 526
Target Start/End: Complemental strand, 141826 - 141776
Alignment:
Q  476 ttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||| |||||||  ||||||||||||||||||||||| |||||||||||    
T  141826 ttcttatgggactctgcccctcaaaatccaaaattccatcgtttagaccca 141776  T

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Target: scaffold0010 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 304 - 523
Target Start/End: Original strand, 140640 - 140860
Alignment:
Q  304 atagccattttagggacaatattaatatttataactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctact 403  Q
    |||| ||||||||||||||||||||| ||  ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||    
T  140640 atagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaaaatcgggttttcagactact 140739  T
Q  404 tgatcggattgctctgaaacttcccc-nnnnnnnnnnnnnnnnttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaat 502  Q
    |||||||||||||| |||||||||||                 ||||||||||||||||||| || |||||||||||||||||||| | |||||||||||    
T  140740 tgatcggattgctccgaaacttccccagaaaatcagaaaaaaattcaaggaccatgactcccataaaagggacttcttacgggacttcgcccctcaaaat 140839  T
Q  503 ccaaaattccattgtttagac 523  Q
    ||||| || ||| ||||||||    
T  140840 ccaaagtttcatcgtttagac 140860  T

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Target: scaffold0182 (Bit Score: 55; Significance: 3e-22; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 23117 - 23191
Alignment:
Q  153 attttataatccggaaacttcaaaaaatagagtgtgttacatgatgtttccggattacatgatccggaaaccccc 227  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| || ||||||||||||||    
T  23117 attttataatccggaaacttcaaaaaatagggtgcattacatgatgtttccggattatataatccggaaaccccc 23191  T

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Target: scaffold0182; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 23299 - 23350
Alignment:
Q  475 cttcttacgggactccacccctcaaaatccaaaattccattgtttagaccca 526  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  23299 cttcttacgggactccgcccctcaaaatccaaaattccatcgtttagaccca 23350  T

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Target: scaffold0182; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 23249 - 23301
Alignment:
Q  296 taacatgtatagccattttagggacaatattaatatttataactcttatcctt 348  Q
    ||||||| |||| ||||||||||||||||||||| ||  ||||||| ||||||    
T  23249 taacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 23301  T

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Target: scaffold0018 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 174223 - 174146
Alignment:
Q  446 ttcaaggaccatgactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  174223 ttcaaggaccatgactcctgtagaagggacttcttacgagactccgcccctcaaaattcaaaattccatcgtttagac 174146  T

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Target: scaffold0564 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 4691 - 4745
Alignment:
Q  469 aagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  4691 aagggacttcttacgggactccacccctcaaaatccaaaattacatcgtttagac 4745  T

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Target: scaffold0564; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 425
Target Start/End: Original strand, 4579 - 4647
Alignment:
Q  357 ggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    ||||||||||| |||||| ||||| |||||  |||||| | |||| ||||||||||||||| |||||||    
T  4579 ggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctccgaaactt 4647  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 523
Target Start/End: Complemental strand, 205748 - 205684
Alignment:
Q  458 gactcccttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagac 523  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||  |||||||    
T  205748 gactcccttagaagagacttcttacgggactcca-ccctcaaaatccaaaatttcatcatttagac 205684  T

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Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 205952 - 205893
Alignment:
Q  465 ttagaagggacttcttacgggactccacccctcaaaatccaaaattccattgtttagaccc 525  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  205952 ttagaaaggacttcttacgggactccgccc-tcaaaatccaaaattccatcatttagaccc 205893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 520
Target Start/End: Original strand, 4122 - 4156
Alignment:
Q  486 actccacccctcaaaatccaaaattccattgttta 520  Q
    ||||| |||||||||||||||||||||||||||||    
T  4122 actccgcccctcaaaatccaaaattccattgttta 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 520
Target Start/End: Original strand, 102426 - 102460
Alignment:
Q  486 actccacccctcaaaatccaaaattccattgttta 520  Q
    ||||| |||||||||||||||||||||||||||||    
T  102426 actccgcccctcaaaatccaaaattccattgttta 102460  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 59926 - 59853
Alignment:
Q  352 ttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 425  Q
    |||| |||||||||||   ||||||||||||||||  | |||||||| ||||||||| |||| ||| |||||||    
T  59926 ttttaggtcattgttagccgttcttagtcaaaaatttgattttcgggttacttgatcagatttctccgaaactt 59853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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