View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13998_low_26 (Length: 257)
Name: NF13998_low_26
Description: NF13998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13998_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 6285774 - 6285602
Alignment:
| Q |
73 |
acataggtaataactttcaccaataagatcaatacatatatgatataaatgcatgttaccaacatgcattgtaaactcaaa--ctaaaagaaaccaaaac |
170 |
Q |
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| T |
6285774 |
acataggtaataactttcaccaataagatcaatacatatatgatataaatgcatgttaccaacatgcattgtaaactcaaaaactaaaagaaaccaaaac |
6285675 |
T |
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| Q |
171 |
atgggatctatttctgaagatattcatgttcttccaaaatgttcaccttttgaagtagaagaagatgatgatg |
243 |
Q |
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| T |
6285674 |
atgggatctatttctgaagatattcatgttcttccaaaatgttcaccttttgaagtagtagaagatgatgatg |
6285602 |
T |
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