View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1399_high_44 (Length: 279)
Name: NF1399_high_44
Description: NF1399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1399_high_44 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 44130458 - 44130276
Alignment:
| Q |
1 |
actttttcctgtctaggtctccactccatataaaattcctcatatatctttctatttctgtaatcaatgaggaaggccaagcataaataagaattgtgtg |
100 |
Q |
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| T |
44130458 |
actttttcttgtataggtctccactccatataaaattcctaatatatctttctatttctttagtcaatgaggaaggccaagcataaataagaattgtgtg |
44130359 |
T |
|
| Q |
101 |
aagtagcataccatggatgacagctttgactagttgaacccttcctgctatagacaacaatgaagctttctaggctgctaatt |
183 |
Q |
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||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44130358 |
aagtagcataccatggatggcaactttgactagttgaacccttcctgctatagacaacaatgaagctttctaggctgctaatt |
44130276 |
T |
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