View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1399_low_28 (Length: 381)
Name: NF1399_low_28
Description: NF1399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1399_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 98 - 374
Target Start/End: Original strand, 25589026 - 25589302
Alignment:
| Q |
98 |
aaatatataagttgattccttaccaaccggatctacattcatgatccaataccaaagtaaaatgtatttaaacaaaagtacccttctttaattatattca |
197 |
Q |
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| T |
25589026 |
aaatatataagttgattccttaccaaccggatctacattcatgatccaataccaaagtaaaatgtatttaaacaaaagtactcttctttaattatattca |
25589125 |
T |
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| Q |
198 |
ttgccttcatgttaggccaaatgtgacaggagaggaaggattttcgatacataaatataaagggtcttttcattgtcaaagcataaatgagggagaaaaa |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25589126 |
ttgccttcatgttaggccaaatgtgacaggagaggaaggattttcgatacataaatataaagggtcttttcattgtcaaagcataaatgagggagaaaaa |
25589225 |
T |
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| Q |
298 |
gaatgtgagagtgattaagatatttcaatggtagttgttctgcaatataaataatttacattggttgtttcatatca |
374 |
Q |
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| T |
25589226 |
gaatgtgagagtgattaagatatttcaatggtagttgttctgcaatataaataatttacattggttgttccatatca |
25589302 |
T |
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