View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14003_high_13 (Length: 330)
Name: NF14003_high_13
Description: NF14003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14003_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 19 - 326
Target Start/End: Original strand, 35522148 - 35522450
Alignment:
| Q |
19 |
aaactaacctcaaacataatataaaatttagttgattgttaatactttgcttgatctataaaaataataagtgtgttctcaaagtaccttttataagaag |
118 |
Q |
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| T |
35522148 |
aaactaacctcaaacataatataaaatttagttgattgttaatactttgcttgatctataaaaataataagtgtgttctcaaagtaccttttataagaag |
35522247 |
T |
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| Q |
119 |
aatttgttccacttaaataaaaggtttattgaagaaaaatgtatattaattgaaaggtttttatcttcttaaaaggcaaagaaattttattaatgtaaat |
218 |
Q |
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| T |
35522248 |
aatttgttccacttaaataaaaggtttattgaagaaaaatgtatattaattcaaaggtttttatcttattaaaaggcaaagaaattttattaatgtaaat |
35522347 |
T |
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| Q |
219 |
acagctatcagaagtagtgcacgagtggaaaaatgcacatattatgattggaacatatgcatgtctagtctagaaccacgactacaaactgacaacaaag |
318 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
35522348 |
acagctatcagaagtagtgcacgagtggaaaaatgtacatattatgattggaacatatgcat-----gtctagaaccacgactacaaactgacaacaaag |
35522442 |
T |
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| Q |
319 |
caagccta |
326 |
Q |
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|||||||| |
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| T |
35522443 |
caagccta |
35522450 |
T |
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