View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14003_high_14 (Length: 327)

Name: NF14003_high_14
Description: NF14003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14003_high_14
NF14003_high_14
[»] chr3 (15 HSPs)
chr3 (18-223)||(8431480-8431686)
chr3 (27-90)||(31525360-31525424)
chr3 (27-87)||(43073118-43073178)
chr3 (27-81)||(28934808-28934861)
chr3 (18-87)||(10454279-10454349)
chr3 (29-81)||(28956952-28957005)
chr3 (27-96)||(44656300-44656369)
chr3 (27-87)||(53349401-53349462)
chr3 (29-87)||(9358823-9358883)
chr3 (29-87)||(47820897-47820957)
chr3 (18-81)||(20701152-20701215)
chr3 (27-81)||(42881885-42881939)
chr3 (35-87)||(46750212-46750263)
chr3 (28-87)||(55166895-55166955)
chr3 (18-81)||(52076066-52076129)
[»] chr1 (12 HSPs)
chr1 (18-165)||(31833817-31833964)
chr1 (27-90)||(12172951-12173015)
chr1 (21-87)||(47028931-47028998)
chr1 (18-87)||(42442072-42442142)
chr1 (29-87)||(43268679-43268739)
chr1 (27-81)||(41955961-41956016)
chr1 (29-87)||(46757306-46757365)
chr1 (29-175)||(19472716-19472857)
chr1 (18-81)||(8463033-8463097)
chr1 (18-87)||(26384960-26385030)
chr1 (27-87)||(26990601-26990662)
chr1 (29-86)||(43460698-43460758)
[»] chr2 (4 HSPs)
chr2 (18-93)||(38908663-38908738)
chr2 (18-87)||(41419617-41419687)
chr2 (27-87)||(14732412-14732473)
chr2 (29-87)||(41378272-41378332)
[»] chr7 (11 HSPs)
chr7 (18-87)||(46691911-46691981)
chr7 (27-81)||(49035928-49035983)
chr7 (27-81)||(22197675-22197729)
chr7 (27-81)||(22240092-22240146)
chr7 (27-84)||(41702867-41702925)
chr7 (121-175)||(30655761-30655815)
chr7 (29-90)||(31424847-31424912)
chr7 (27-81)||(36615874-36615927)
chr7 (35-87)||(43397640-43397692)
chr7 (27-81)||(33320710-33320765)
chr7 (18-81)||(30655662-30655727)
[»] chr8 (8 HSPs)
chr8 (27-81)||(10124866-10124922)
chr8 (27-87)||(5200554-5200615)
chr8 (18-87)||(40930893-40930961)
chr8 (27-87)||(24200693-24200753)
chr8 (18-80)||(13959284-13959347)
chr8 (18-87)||(25829329-25829399)
chr8 (29-87)||(30836212-30836272)
chr8 (28-87)||(7845080-7845138)
[»] chr5 (8 HSPs)
chr5 (27-96)||(25539810-25539879)
chr5 (29-81)||(2292168-2292222)
chr5 (27-87)||(3677864-3677924)
chr5 (18-81)||(819193-819254)
chr5 (30-87)||(9931877-9931935)
chr5 (29-87)||(22887211-22887269)
chr5 (18-87)||(23173037-23173107)
chr5 (27-81)||(10431063-10431118)
[»] chr6 (8 HSPs)
chr6 (29-87)||(10246910-10246969)
chr6 (29-87)||(15859093-15859154)
chr6 (121-175)||(11546685-11546739)
chr6 (28-87)||(33984753-33984814)
chr6 (18-88)||(6575720-6575791)
chr6 (28-81)||(33112790-33112844)
chr6 (121-175)||(34761080-34761134)
chr6 (29-81)||(11546772-11546825)
[»] chr4 (4 HSPs)
chr4 (29-87)||(32183275-32183336)
chr4 (18-79)||(47571634-47571694)
chr4 (18-81)||(16572074-16572138)
chr4 (36-86)||(42390855-42390906)


Alignment Details
Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 8431480 - 8431686
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccctaacactaaggcactaactaccggacacaa 117  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  8431480 aaaataaacacaaggggaaatcggttgcaacaaaacaccggctcgaacaaaaaccccttaaaaaccaccccaacactaaggcactaactaccggtcaaaa 8431579  T
Q  118 aaataa-tgacgcagacatatacaaatgacaatccgcaagcatacccctgcatcaacactcataacagccaaaactgcagcaccacaccaaaaagacagc 216  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8431580 aaaaaaatgacgcagacatatacaaatgacaatccgcaagcatacccctgcatcaacactcataacagccaaaactacagcaccacaccaaaaagacagc 8431679  T
Q  217 agcaacc 223  Q
    |||||||    
T  8431680 agcaacc 8431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 31525424 - 31525360
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccctaa 90  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  31525424 acaaggggaaatcggttgccacacaaacaacggctcgaacaaaaaccccttaaaaaccaccctaa 31525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 43073118 - 43073178
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  43073118 acaaggggaaatcggttgccttaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 43073178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 28934808 - 28934861
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28934808 acaaggggaaatcggttgccacaaa-caccggctcgaacaaaaaccccttaaaaa 28934861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 10454349 - 10454279
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaaca-ccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | |||||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||||    
T  10454349 aaaatacatacaaggggaaatcggttgccacaagaaagccggctcaaacaaaaaccccttaaaaaccaccc 10454279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 28957005 - 28956952
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  28957005 aaggggaaatcggttgccacacaaacaccggctcgaacaaaaacccctttaaaa 28956952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 44656300 - 44656369
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccctaacactaa 96  Q
    ||||||| ||||||||||||| | ||||| | |||||||||||| ||||||||||||||||||| |||||    
T  44656300 acaagggaaaatcggttgccatataacacagactcgaacaaaaatcccttaaaaaccaccctaaaactaa 44656369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 53349462 - 53349401
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||| |||||||||||| || |||||||||||| |||||||||||||||||||||||||    
T  53349462 acaagggaaaatcggttgccgcacaaacaccggctcaaacaaaaaccccttaaaaaccaccc 53349401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 9358823 - 9358883
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccc-ttaaaaaccaccc 87  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  9358823 aaggggaaatcggttgccgcacaaacaccggctcgaacaaaaacccctttaaaaaccaccc 9358883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 47820957 - 47820897
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccc-ttaaaaaccaccc 87  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  47820957 aaggggaaatcggttgccgcacaaacaccggctcgaacaaaaacccctttaaaaaccaccc 47820897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 20701215 - 20701152
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||| | |||||||||||||| |||||||| |||  ||||||||||||||||||||||||||    
T  20701215 aaaatacaaacaaggggaaatcgattgccacacaactacggctcgaacaaaaaccccttaaaaa 20701152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 42881939 - 42881885
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||| |||||||||    
T  42881939 acaaggggaaatcgattgccacaatacaccggctcaaacaaaaacgccttaaaaa 42881885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 46750263 - 46750212
Alignment:
Q  35 aaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  46750263 aaatcggttgccgcaaaacaccggttcgaacaaaaa-cccttaaaaaccaccc 46750212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 55166895 - 55166955
Alignment:
Q  28 caaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||||||||||||||| || ||||   |||||||||||||||||||||||||||||||    
T  55166895 caaggggaaatcggttgccgcacaaactttggctcgaacaaaaaccccttaaaaaccaccc 55166955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 52076129 - 52076066
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||| | |||||||| |||||||||||| ||||||   ||||||||||||||||||||||||    
T  52076129 aaaatacaaacaaggggtaatcggttgccataaaacaaacgctcgaacaaaaaccccttaaaaa 52076066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 31833964 - 31833817
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccctaacactaaggcactaactaccggacacaa 117  Q
    |||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | |||||    
T  31833964 aaaaaaaatacaagggaaaatcggttgccacataacaccggctcgaacaaaaaccccttaaaaaccaccccaacactaaggcacaaactaccagtcacaa 31833865  T
Q  118 aaataatgacgcagacatatacaaatgacaatccgcaagcatacccct 165  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||    
T  31833864 aagtaatgacgcagacatatacaaatggcaatccgcaagcatacccct 31833817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 12173015 - 12172951
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccctaa 90  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  12173015 acaaggggaaatcggttgccacacaaacatcagctcgaacaaaaaccccttaaaaaccaccctaa 12172951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 47028998 - 47028931
Alignment:
Q  21 ataaacacaaggggaaatcggttgccacaaaa-caccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  47028998 ataaatacaaggggaaatcggttgccgcaaaaacaccggctcgaacaaaaaccccttaaaaactaccc 47028931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 42442072 - 42442142
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccac-aaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | |||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  42442072 aaaatacaaacaacgggaaatcggttgccattaaaacaccgactcgaacaaaaaccccttaaaaaccaccc 42442142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 43268679 - 43268739
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccc-ttaaaaaccaccc 87  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  43268679 aaggggaaatcggttgccgcacaaacaccggctcgaacaaaaacccctttaaaaaccaccc 43268739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 41955961 - 41956016
Alignment:
Q  27 acaaggggaaatcggttgccacaa-aacaccggctcgaacaaaaaccccttaaaaa 81  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  41955961 acaaggggaaatcggttgccataataacaccggctcgaacaaaaatcccttaaaaa 41956016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 46757365 - 46757306
Alignment:
Q  29 aaggggaaatcggttgccacaa-aacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||    
T  46757365 aaggggaaatcgattgccacaataacaccagctcgaacaaaaaccctttaaaaaccaccc 46757306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 19472857 - 19472716
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccctt-aaaaaccaccctaacactaaggcactaactaccggacacaaaaataatga 126  Q
    ||||||||||| ||||||| | |||| |||||||||||||||| ||||| |||||||||||  | ||||||| ||  ||       ||||| | ||||||    
T  19472857 aaggggaaatcagttgccatacaaactccggctcgaacaaaaatccctttaaaaaccacccataaactaaggaacacac-------cacaagagtaatga 19472765  T
Q  127 cgcagacatatacaaatgacaatccgcaagcatacccctgcatcaacac 175  Q
    ||||| ||||||||| |||||  || |||||||||||||||||||||||    
T  19472764 cgcaggcatatacaagtgacagaccacaagcatacccctgcatcaacac 19472716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 8463033 - 8463097
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaa-caccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||| | ||||||| |||||||||||||||||| |  ||||||||||||||||||||||||||    
T  8463033 aaaatacatacaagggaaaatcggttgccacaaaaacgtcggctcgaacaaaaaccccttaaaaa 8463097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 26385030 - 26384960
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | |||| ||||||||||||| || | ||||||| |||| ||||||| |||||||||||||||||    
T  26385030 aaaatacaaacaaagggaaatcggttgtcatacaaacaccagctcaaacaaaacccccttaaaaaccaccc 26384960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 26990662 - 26990601
Alignment:
Q  27 acaaggggaaatcggttgccacaaaa-caccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||| |||||| ||||| || || ||||||||| |||||||| ||||||||||||||||    
T  26990662 acaagggaaaatcgattgccgcacaagcaccggctcaaacaaaaatcccttaaaaaccaccc 26990601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 43460758 - 43460698
Alignment:
Q  29 aaggggaaatcggttgcca--caaaacaccggctcgaacaaaaacccctt-aaaaaccacc 86  Q
    ||||||||||||||||| |  |||||||| | |||||||||||||||||| ||||||||||    
T  43460758 aaggggaaatcggttgcgatacaaaacactgactcgaacaaaaaccccttcaaaaaccacc 43460698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 38908738 - 38908663
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccctaacac 93  Q
    |||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  38908738 aaaataaatacaagggaaaatcggtagccacaaaacaccggttcgaacaaaaaccccttaaaaaccaccccaacac 38908663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 41419687 - 41419617
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaa-aacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||| ||| ||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  41419687 aaaacaaatacaaggggaaatcggttgccataataacaccgactcgaacaaaaaccccttaaaaaccaccc 41419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 14732412 - 14732473
Alignment:
Q  27 acaaggggaaatcggttgccacaaaac-accggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||||||||||||| || |||||  ||| ||||||||||||||||||||||||||||||    
T  14732412 acaaggggaaatcggttaccgcaaaaataccagctcgaacaaaaaccccttaaaaaccaccc 14732473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 41378272 - 41378332
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccc-ttaaaaaccaccc 87  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||| |||||||||||||    
T  41378272 aaggggaaatcggttgccacacaaactccggctcgaataaaaacccctttaaaaaccaccc 41378332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 46691911 - 46691981
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46691911 aaaatacatacaaggggaaatcggttgccacataaacaccggctcgaacaaaaaccccttaaaaaccaccc 46691981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 49035928 - 49035983
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  49035928 acaaggggaaatcggttgccacataaacaccggttcgaacaaaaaccccttaaaaa 49035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 22197729 - 22197675
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  22197729 acaaggggaaatcgattaccacaaaacaccgtctcgaacaaaaaccccttaaaaa 22197675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 22240092 - 22240146
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  22240092 acaaggggaaatcgattaccacaaaacaccgtctcgaacaaaaaccccttaaaaa 22240146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 41702925 - 41702867
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaacca 84  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  41702925 acaaggggaagtcggttgccgcacaaacaccggctcgaacaaaaaccccttaaaaacca 41702867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 30655761 - 30655815
Alignment:
Q  121 taatgacgcagacatatacaaatgacaatccgcaagcatacccctgcatcaacac 175  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||| |||||||    
T  30655761 taatgacgccggcatatacaaatgacaatccacaagcatacccctgcgtcaacac 30655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 31424847 - 31424912
Alignment:
Q  29 aaggggaaatcggttgcca--caaaacaccggctcgaacaaaaacccctt--aaaaaccaccctaa 90  Q
    |||||||||||||||||||  | |||||||||||||| ||||||||||||  ||||||||||||||    
T  31424847 aaggggaaatcggttgccattcgaaacaccggctcgatcaaaaacccctttaaaaaaccaccctaa 31424912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 36615874 - 36615927
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||||||||||||||||| |||| || |||||||||||||||| |||||||    
T  36615874 acaaggggaaatcggttgccac-aaactccagctcgaacaaaaaccctttaaaaa 36615927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 43397692 - 43397640
Alignment:
Q  35 aaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||| |||||||||||||| | |||||||||||||||| | |||||||||||    
T  43397692 aaatctgttgccacaaaacaactgctcgaacaaaaacccttaaaaaaccaccc 43397640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 33320765 - 33320710
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||||||| |||||||  | |||||||||||||||||||| |||||||||||    
T  33320765 acaaggggaaattggttgccttacaaacaccggctcgaacaaaacccccttaaaaa 33320710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 30655662 - 30655727
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgc--cacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||| | |||||||||||||||||||  ||||||| | || |||||||||||||| ||||||||    
T  30655662 aaaatacaaacaaggggaaatcggttgccacacaaaatatcgactcgaacaaaaacctcttaaaaa 30655727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 10124922 - 10124866
Alignment:
Q  27 acaaggggaaatcggttgcc--acaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  10124922 acaaggggaaatcggttgcctaacaaaacaccggctcgaacaaaaaccccttaaaaa 10124866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 5200554 - 5200615
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  5200554 acaagggaaaatcggttgccgcacaaacaccggctcgaacaaaaaccccttaaaaatcaccc 5200615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 40930893 - 40930961
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | |||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||    
T  40930893 aaaatacaaacaaggggaaatcggttgtcacaaa-caacggctcgaacaaaaactccttaaaaaccaccc 40930961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 24200693 - 24200753
Alignment:
Q  27 acaaggggaaatcggttgccacaaaa-caccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||    
T  24200693 acaaggggaaatcggttgccgcaaaaacaccggctcgaacaaaaa-cacttaaaaaccaccc 24200753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 13959284 - 13959347
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaa 80  Q
    |||||| | |||| || ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13959284 aaaatacaaacaaaggaaaatcggttgccacataaacaccggctcaaacaaaaaccccttaaaa 13959347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 25829329 - 25829399
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | ||||||||||||||||| ||  | ||||||||||| ||| ||||||||||||||||||||||    
T  25829329 aaaatacaaacaaggggaaatcggtttccctataaacaccggcttgaataaaaaccccttaaaaaccaccc 25829399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 30836212 - 30836272
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccc-ttaaaaaccaccc 87  Q
    |||||||||||| ||||| || ||| ||||||||||||||||||||| |||||||||||||    
T  30836212 aaggggaaatcgattgccgcacaaataccggctcgaacaaaaacccctttaaaaaccaccc 30836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7845138 - 7845080
Alignment:
Q  28 caaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||||||||||||||| |||  |||||||||||||||  || |||||||||||||||||    
T  7845138 caaggggaaatcggttgcaacattaacaccggctcgaac--aatccccttaaaaaccaccc 7845080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 25539879 - 25539810
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccctaacactaa 96  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||| || |||||    
T  25539879 acaagaggaaatcggttgccatcaaacatcggctcgaacaaaaaccccttaaaaaccaccccaaaactaa 25539810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 2292222 - 2292168
Alignment:
Q  29 aaggggaaatcggttgcc--acaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  2292222 aaggggaaatcggttgcctaacaaaacaccggctcgaacaaaaaccccttaaaaa 2292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 3677864 - 3677924
Alignment:
Q  27 acaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||||  ||||||||||| ||| |||| ||||| |||||||||||||||||||||||||    
T  3677864 acaagggacaatcggttgccgcaatacactggctcaaacaaaaaccccttaaaaaccaccc 3677924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 819193 - 819254
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||| |||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  819193 aaaataaa-acaaagggaaatcggttgccacaaa-caccaactcgaacaaaaaccccttaaaaa 819254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 9931877 - 9931935
Alignment:
Q  30 aggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||||||||||||||| || ||||||| |||||||||||||| ||| |||||||||||    
T  9931877 aggggaaatcggttgccgcacaaacaccagctcgaacaaaaacacctcaaaaaccaccc 9931935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 22887269 - 22887211
Alignment:
Q  29 aaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    ||||| ||||| |||||||||||| || || || |||||||||||||||||||||||||    
T  22887269 aagggaaaatcagttgccacaaaagacaggttcaaacaaaaaccccttaaaaaccaccc 22887211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 23173037 - 23173107
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccc 87  Q
    |||||| | |||||| |||||| ||||||  | |||||||||||||||||||| |||||||||||||||||    
T  23173037 aaaatacaaacaaggagaaatcagttgccctataaacaccggctcgaacaaaacccccttaaaaaccaccc 23173107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 10431118 - 10431063
Alignment:
Q  27 acaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||| | ||||||    
T  10431118 acaaggagaaatcggttgccacacaaacaccgactcgaacaaaaacctcataaaaa 10431063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 10246969 - 10246910
Alignment:
Q  29 aaggggaaatcggttgccacaaaacaccggctcgaacaaaaacccc-ttaaaaaccaccc 87  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  10246969 aagggaaaatcggttgtcacacaacaccggctcgaacaaaaacccctttaaaaaccaccc 10246910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 15859154 - 15859093
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccctt--aaaaaccaccc 87  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||    
T  15859154 aaggggaaatcggttgccaaacaaacaccggctcgaacaaaaacccctttaaaaaaccaccc 15859093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 11546739 - 11546685
Alignment:
Q  121 taatgacgcagacatatacaaatgacaatccgcaagcatacccctgcatcaacac 175  Q
    |||||||||||||||||||| |||||||||| || | |||||||||| |||||||    
T  11546739 taatgacgcagacatatacatatgacaatcctcatgaatacccctgcgtcaacac 11546685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 33984814 - 33984753
Alignment:
Q  28 caaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccctt-aaaaaccaccc 87  Q
    |||||||||||||||||||| | |||||| || ||||||||||||||||| |||||||||||    
T  33984814 caaggggaaatcggttgccatacaaacactggttcgaacaaaaaccccttcaaaaaccaccc 33984753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 6575791 - 6575720
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaaccaccct 88  Q
    |||||| |||||| || ||||| |||| || | ||||| ||||||||||||||||| |||||||||||||||    
T  6575791 aaaatacacacaaaggaaaatcagttgtcatacaaacatcggctcgaacaaaaacctcttaaaaaccaccct 6575720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 33112790 - 33112844
Alignment:
Q  28 caaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||||||||||||||| | ||||   |||||||||||||||||||||||||    
T  33112790 caaggggaaatcggttgccatacaaactttggctcgaacaaaaaccccttaaaaa 33112844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 34761134 - 34761080
Alignment:
Q  121 taatgacgcagacatatacaaatgacaatccgcaagcatacccctgcatcaacac 175  Q
    ||||||||||| |||||||| |||||||||| || | |||||||||| |||||||    
T  34761134 taatgacgcaggcatatacatatgacaatcctcatgaatacccctgcgtcaacac 34761080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 11546825 - 11546772
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||| ||||||||||| || | |||||||||||||||||||||| |||||||||    
T  11546825 aaggagaaatcggttgtcatacaaacaccggctcgaacaaaaactccttaaaaa 11546772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 32183336 - 32183275
Alignment:
Q  29 aaggggaaatcggttgccaca-aaacaccggctcgaacaaaaacccctt--aaaaaccaccc 87  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||    
T  32183336 aaggggaaatcggttgccatacaaacaccggctcgaacaaaaacccctttaaaaaaccaccc 32183275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 47571634 - 47571694
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccacaaaacaccggctcgaacaaaaaccccttaaa 79  Q
    |||||||| ||||||| |||| |||||||||||| ||||||||| |||||||||||||||||    
T  47571634 aaaataaatacaagggaaaattggttgccacaaa-caccggctcaaacaaaaaccccttaaa 47571694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 16572138 - 16572074
Alignment:
Q  18 aaaataaacacaaggggaaatcggttgccac-aaaacaccggctcgaacaaaaaccccttaaaaa 81  Q
    |||||||| |||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||    
T  16572138 aaaataaatacaaggggaaatcggttgccgcaaaaacaccggttcgaacaaaacccctttaaaaa 16572074  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 42390855 - 42390906
Alignment:
Q  36 aatcggttgccac-aaaacaccggctcgaacaaaaaccccttaaaaaccacc 86  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  42390855 aatcggttgccgctaaaacaccggctcaaacaaaaaccccttaaaaaccacc 42390906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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