View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14003_high_24 (Length: 236)

Name: NF14003_high_24
Description: NF14003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14003_high_24
NF14003_high_24
[»] chr4 (69 HSPs)
chr4 (103-221)||(40173369-40173487)
chr4 (1-96)||(15515872-15515967)
chr4 (1-96)||(19720529-19720624)
chr4 (1-96)||(2193697-2193792)
chr4 (1-90)||(5208221-5208310)
chr4 (1-90)||(27001303-27001392)
chr4 (1-90)||(31221501-31221590)
chr4 (6-99)||(32079202-32079295)
chr4 (1-90)||(47105999-47106088)
chr4 (2-90)||(9032869-9032957)
chr4 (1-96)||(15638218-15638313)
chr4 (1-95)||(25936328-25936422)
chr4 (2-96)||(32365555-32365649)
chr4 (4-98)||(35824005-35824098)
chr4 (1-99)||(43358701-43358798)
chr4 (1-90)||(8026658-8026747)
chr4 (1-98)||(13267365-13267461)
chr4 (1-98)||(18568701-18568798)
chr4 (1-90)||(37022349-37022438)
chr4 (1-90)||(44368096-44368185)
chr4 (1-90)||(51377187-51377276)
chr4 (1-97)||(32901417-32901513)
chr4 (1-93)||(41495101-41495193)
chr4 (1-88)||(7037380-7037467)
chr4 (2-96)||(11568804-11568899)
chr4 (1-56)||(49424748-49424803)
chr4 (2-56)||(36728550-36728604)
chr4 (1-90)||(3223077-3223166)
chr4 (1-98)||(4896387-4896483)
chr4 (1-54)||(48650186-48650239)
chr4 (1-96)||(22920159-22920254)
chr4 (1-96)||(22971545-22971640)
chr4 (1-56)||(26440751-26440806)
chr4 (1-96)||(41170860-41170955)
chr4 (1-56)||(47519648-47519703)
chr4 (2-80)||(46844145-46844223)
chr4 (1-66)||(18874842-18874907)
chr4 (3-96)||(20056472-20056565)
chr4 (4-97)||(20632535-20632628)
chr4 (1-90)||(24235408-24235497)
chr4 (1-66)||(28899134-28899199)
chr4 (1-54)||(45678351-45678404)
chr4 (1-54)||(53292238-53292291)
chr4 (1-90)||(55267895-55267984)
chr4 (1-57)||(924989-925045)
chr4 (2-54)||(9096026-9096077)
chr4 (2-66)||(29577354-29577418)
chr4 (2-97)||(33483993-33484088)
chr4 (2-56)||(40847458-40847510)
chr4 (4-66)||(1728007-1728069)
chr4 (2-32)||(36512931-36512961)
chr4 (1-90)||(1796453-1796541)
chr4 (1-66)||(18634789-18634854)
chr4 (5-89)||(24154704-24154786)
chr4 (2-55)||(24310450-24310503)
chr4 (1-66)||(31413704-31413769)
chr4 (1-66)||(33776982-33777047)
chr4 (1-66)||(43982985-43983050)
chr4 (1-30)||(46173625-46173654)
chr4 (2-55)||(53763740-53763793)
chr4 (2-55)||(53781766-53781819)
chr4 (1-94)||(55642495-55642588)
chr4 (6-66)||(8614275-8614335)
chr4 (6-90)||(24019865-24019949)
chr4 (1-57)||(29949600-29949656)
chr4 (1-57)||(34027984-34028040)
chr4 (1-57)||(40721891-40721947)
chr4 (2-66)||(46799845-46799908)
chr4 (6-90)||(53662336-53662420)
[»] chr7 (54 HSPs)
chr7 (6-98)||(37149361-37149453)
chr7 (1-96)||(25614709-25614804)
chr7 (1-90)||(30864311-30864400)
chr7 (1-98)||(37385119-37385216)
chr7 (1-96)||(42431811-42431906)
chr7 (1-66)||(25272679-25272744)
chr7 (2-90)||(47530185-47530273)
chr7 (1-90)||(33050271-33050360)
chr7 (1-90)||(44175633-44175722)
chr7 (2-90)||(116720-116808)
chr7 (2-98)||(8742472-8742568)
chr7 (1-56)||(39369390-39369445)
chr7 (1-66)||(22331129-22331194)
chr7 (1-90)||(26041398-26041487)
chr7 (1-90)||(27164731-27164820)
chr7 (1-90)||(38978580-38978668)
chr7 (7-90)||(30402087-30402168)
chr7 (2-66)||(40077344-40077408)
chr7 (1-57)||(48086947-48087003)
chr7 (2-97)||(10014842-10014937)
chr7 (2-56)||(10161858-10161912)
chr7 (5-67)||(35590712-35590774)
chr7 (1-90)||(5900974-5901063)
chr7 (2-55)||(23034242-23034295)
chr7 (6-95)||(32315919-32316008)
chr7 (1-90)||(44511227-44511316)
chr7 (1-98)||(48866817-48866913)
chr7 (1-66)||(49142435-49142500)
chr7 (2-90)||(2346953-2347041)
chr7 (1-97)||(30180595-30180690)
chr7 (2-66)||(44187780-44187844)
chr7 (1-57)||(48522244-48522300)
chr7 (6-97)||(7295560-7295651)
chr7 (1-64)||(33056704-33056767)
chr7 (1-100)||(34348912-34349010)
chr7 (2-57)||(38990190-38990245)
chr7 (1-56)||(40108212-40108267)
chr7 (1-56)||(42942307-42942362)
chr7 (2-56)||(2005818-2005872)
chr7 (1-55)||(2600463-2600517)
chr7 (2-35)||(8061694-8061727)
chr7 (1-98)||(21037122-21037219)
chr7 (2-35)||(25427810-25427843)
chr7 (1-90)||(29162173-29162262)
chr7 (2-55)||(29923760-29923813)
chr7 (1-66)||(33464955-33465020)
chr7 (1-66)||(41910103-41910168)
chr7 (1-30)||(44894428-44894457)
chr7 (1-57)||(1790079-1790135)
chr7 (1-96)||(1838347-1838443)
chr7 (2-30)||(33684769-33684797)
chr7 (6-50)||(35005033-35005077)
chr7 (2-74)||(37325729-37325801)
chr7 (1-97)||(42476455-42476551)
[»] chr2 (60 HSPs)
chr2 (2-97)||(10466075-10466170)
chr2 (1-95)||(17826135-17826229)
chr2 (1-97)||(31847619-31847716)
chr2 (1-96)||(30973879-30973974)
chr2 (1-96)||(36909732-36909826)
chr2 (3-90)||(37966446-37966533)
chr2 (1-90)||(23047977-23048066)
chr2 (1-96)||(5962726-5962821)
chr2 (1-83)||(36383550-36383632)
chr2 (1-90)||(33029996-33030085)
chr2 (1-90)||(44484550-44484639)
chr2 (1-57)||(14954526-14954582)
chr2 (2-90)||(29871249-29871337)
chr2 (2-66)||(37076742-37076806)
chr2 (5-96)||(15226946-15227036)
chr2 (1-96)||(34442201-34442295)
chr2 (1-99)||(3195972-3196070)
chr2 (1-66)||(4263782-4263847)
chr2 (1-54)||(8757632-8757685)
chr2 (1-90)||(10688029-10688118)
chr2 (1-90)||(38246645-38246734)
chr2 (2-98)||(9384464-9384560)
chr2 (1-97)||(10550346-10550442)
chr2 (5-96)||(42678638-42678727)
chr2 (1-92)||(6365274-6365364)
chr2 (2-92)||(34853015-34853105)
chr2 (1-64)||(35798297-35798360)
chr2 (3-90)||(36582346-36582433)
chr2 (2-56)||(38795449-38795504)
chr2 (1-55)||(19631476-19631530)
chr2 (1-55)||(19828377-19828431)
chr2 (2-80)||(33857306-33857384)
chr2 (1-98)||(3585714-3585811)
chr2 (1-90)||(30413626-30413715)
chr2 (1-66)||(37631285-37631350)
chr2 (3-96)||(44018137-44018229)
chr2 (1-81)||(3299008-3299088)
chr2 (2-90)||(6884999-6885087)
chr2 (2-66)||(12256990-12257054)
chr2 (6-90)||(27307139-27307223)
chr2 (2-98)||(30192237-30192333)
chr2 (2-66)||(36763438-36763502)
chr2 (1-56)||(12192035-12192090)
chr2 (1-48)||(12208530-12208577)
chr2 (2-92)||(12358402-12358492)
chr2 (6-56)||(38572032-38572082)
chr2 (8-98)||(42141496-42141586)
chr2 (8-61)||(3366126-3366179)
chr2 (1-30)||(6639426-6639455)
chr2 (1-57)||(20507524-20507581)
chr2 (2-83)||(28301951-28302032)
chr2 (8-53)||(30487383-30487428)
chr2 (1-90)||(34144446-34144534)
chr2 (1-30)||(40951278-40951307)
chr2 (3-48)||(43936396-43936441)
chr2 (1-61)||(694357-694417)
chr2 (2-66)||(11828738-11828802)
chr2 (1-57)||(29582307-29582363)
chr2 (1-57)||(39133810-39133866)
chr2 (3-35)||(44085369-44085401)
[»] chr1 (59 HSPs)
chr1 (2-96)||(48871843-48871937)
chr1 (2-98)||(29489245-29489341)
chr1 (1-93)||(7078391-7078483)
chr1 (1-101)||(25130791-25130891)
chr1 (2-90)||(26501384-26501472)
chr1 (1-96)||(43457708-43457802)
chr1 (1-97)||(42843231-42843327)
chr1 (1-92)||(11097776-11097867)
chr1 (1-96)||(26547322-26547417)
chr1 (1-95)||(9011733-9011827)
chr1 (2-96)||(51193021-51193115)
chr1 (1-98)||(34395806-34395902)
chr1 (1-90)||(7371842-7371931)
chr1 (1-90)||(13813646-13813735)
chr1 (1-90)||(27578270-27578359)
chr1 (1-90)||(25995548-25995639)
chr1 (1-95)||(50777312-50777406)
chr1 (1-90)||(50035432-50035521)
chr1 (1-57)||(29362619-29362675)
chr1 (1-57)||(42256548-42256604)
chr1 (2-66)||(51168686-51168750)
chr1 (1-56)||(36669298-36669353)
chr1 (4-98)||(7420725-7420819)
chr1 (1-55)||(37947149-37947203)
chr1 (1-90)||(6829679-6829768)
chr1 (2-55)||(8577431-8577484)
chr1 (1-66)||(21255703-21255768)
chr1 (19-96)||(33660151-33660227)
chr1 (1-54)||(35030692-35030745)
chr1 (1-66)||(41885809-41885874)
chr1 (2-99)||(42829194-42829290)
chr1 (1-98)||(50797868-50797965)
chr1 (2-66)||(1100306-1100370)
chr1 (1-101)||(30530283-30530382)
chr1 (1-96)||(3100530-3100625)
chr1 (2-61)||(26839469-26839527)
chr1 (3-54)||(30547440-30547491)
chr1 (2-57)||(38019429-38019484)
chr1 (1-32)||(50226832-50226863)
chr1 (2-56)||(16658528-16658582)
chr1 (1-90)||(22171409-22171499)
chr1 (1-55)||(24158738-24158792)
chr1 (2-32)||(29877114-29877144)
chr1 (1-66)||(11460882-11460947)
chr1 (1-66)||(11897262-11897327)
chr1 (1-66)||(16987535-16987600)
chr1 (3-56)||(19920852-19920905)
chr1 (2-55)||(26760651-26760704)
chr1 (2-55)||(31244664-31244717)
chr1 (1-66)||(32966355-32966420)
chr1 (2-35)||(34941869-34941902)
chr1 (2-35)||(35972753-35972786)
chr1 (1-66)||(48962074-48962139)
chr1 (15-67)||(8934451-8934503)
chr1 (2-66)||(17526509-17526573)
chr1 (1-97)||(30196800-30196896)
chr1 (2-42)||(32939228-32939268)
chr1 (2-66)||(40118633-40118697)
chr1 (1-57)||(48325310-48325366)
[»] chr8 (57 HSPs)
chr8 (2-96)||(5925144-5925238)
chr8 (6-97)||(10344421-10344512)
chr8 (2-96)||(5924899-5924993)
chr8 (1-90)||(30927825-30927914)
chr8 (1-99)||(2597045-2597143)
chr8 (1-90)||(19723100-19723189)
chr8 (1-98)||(36497749-36497846)
chr8 (1-94)||(37562031-37562124)
chr8 (2-90)||(33817246-33817334)
chr8 (1-92)||(34765742-34765833)
chr8 (1-90)||(39258949-39259038)
chr8 (1-90)||(41273603-41273692)
chr8 (1-97)||(7129621-7129716)
chr8 (1-55)||(1422631-1422685)
chr8 (1-55)||(28772393-28772447)
chr8 (1-90)||(1065505-1065594)
chr8 (1-66)||(34641641-34641706)
chr8 (6-99)||(37568497-37568590)
chr8 (2-66)||(38844709-38844773)
chr8 (1-96)||(5359426-5359520)
chr8 (1-88)||(6825173-6825260)
chr8 (1-56)||(8888340-8888395)
chr8 (6-98)||(28623009-28623103)
chr8 (2-57)||(32185593-32185648)
chr8 (3-90)||(41293616-41293702)
chr8 (2-96)||(6807004-6807098)
chr8 (2-88)||(14531710-14531796)
chr8 (2-56)||(35595299-35595353)
chr8 (2-83)||(6656240-6656321)
chr8 (2-83)||(6736642-6736723)
chr8 (5-90)||(36593680-36593765)
chr8 (1-97)||(11138984-11139080)
chr8 (1-81)||(13884404-13884484)
chr8 (6-90)||(14228786-14228870)
chr8 (1-61)||(14233567-14233627)
chr8 (1-57)||(14548752-14548808)
chr8 (2-42)||(42716409-42716449)
chr8 (2-97)||(8233383-8233478)
chr8 (19-90)||(13565412-13565483)
chr8 (1-56)||(20288621-20288676)
chr8 (1-56)||(21075250-21075305)
chr8 (2-41)||(32175043-32175082)
chr8 (1-48)||(40211683-40211730)
chr8 (1-96)||(40608601-40608696)
chr8 (1-55)||(5742586-5742640)
chr8 (1-35)||(13267035-13267069)
chr8 (1-55)||(35967335-35967389)
chr8 (1-66)||(6849179-6849244)
chr8 (1-98)||(9431172-9431268)
chr8 (1-42)||(9985620-9985661)
chr8 (1-30)||(28473499-28473528)
chr8 (8-97)||(33944854-33944943)
chr8 (1-66)||(34838188-34838253)
chr8 (1-97)||(37343462-37343561)
chr8 (1-90)||(43587729-43587818)
chr8 (2-30)||(11223813-11223841)
chr8 (2-90)||(38504259-38504347)
[»] chr3 (61 HSPs)
chr3 (1-90)||(50279981-50280070)
chr3 (1-97)||(31206754-31206850)
chr3 (1-96)||(54233389-54233484)
chr3 (2-88)||(35756069-35756155)
chr3 (1-90)||(13159749-13159838)
chr3 (4-100)||(9582043-9582139)
chr3 (2-90)||(36819045-36819133)
chr3 (2-97)||(23906874-23906969)
chr3 (1-99)||(28263633-28263731)
chr3 (1-66)||(2935429-2935494)
chr3 (1-90)||(3957912-3958001)
chr3 (1-90)||(11327196-11327285)
chr3 (1-90)||(20714331-20714420)
chr3 (1-90)||(32931812-32931901)
chr3 (1-90)||(52453986-52454075)
chr3 (1-88)||(30400052-30400139)
chr3 (1-88)||(49886751-49886838)
chr3 (1-96)||(50652476-50652571)
chr3 (1-54)||(2482604-2482657)
chr3 (1-90)||(30633708-30633797)
chr3 (1-66)||(33971971-33972036)
chr3 (1-90)||(34021357-34021446)
chr3 (1-90)||(41877776-41877865)
chr3 (1-66)||(42102325-42102390)
chr3 (1-54)||(43149273-43149326)
chr3 (1-90)||(44855339-44855428)
chr3 (1-90)||(46344502-46344591)
chr3 (1-66)||(49361755-49361820)
chr3 (1-90)||(50879683-50879772)
chr3 (1-90)||(53102796-53102885)
chr3 (2-54)||(9027702-9027754)
chr3 (2-98)||(27937053-27937149)
chr3 (2-98)||(43441759-43441855)
chr3 (1-56)||(7142-7197)
chr3 (27-98)||(35074041-35074112)
chr3 (1-64)||(42755743-42755806)
chr3 (1-96)||(53932279-53932374)
chr3 (1-90)||(8254115-8254204)
chr3 (1-66)||(27276822-27276887)
chr3 (2-95)||(51717530-51717623)
chr3 (10-66)||(1031345-1031401)
chr3 (2-66)||(35987330-35987394)
chr3 (2-66)||(44127110-44127174)
chr3 (1-80)||(23163049-23163128)
chr3 (2-56)||(2009743-2009797)
chr3 (1-55)||(2280265-2280319)
chr3 (1-67)||(34900728-34900794)
chr3 (2-56)||(43900861-43900915)
chr3 (1-35)||(51921501-51921535)
chr3 (1-66)||(27198072-27198137)
chr3 (2-35)||(28884569-28884602)
chr3 (1-30)||(37303028-37303057)
chr3 (1-90)||(40478181-40478270)
chr3 (2-95)||(41348882-41348975)
chr3 (1-66)||(48205133-48205198)
chr3 (2-42)||(2812370-2812410)
chr3 (1-49)||(3069510-3069558)
chr3 (15-67)||(12762860-12762912)
chr3 (1-29)||(29846846-29846874)
chr3 (2-42)||(30796556-30796596)
chr3 (2-66)||(35376469-35376533)
[»] scaffold0193 (1 HSPs)
scaffold0193 (2-89)||(24762-24849)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-90)||(1390-1479)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-90)||(147150-147239)
scaffold0002 (2-30)||(440807-440835)
[»] chr5 (51 HSPs)
chr5 (1-90)||(15622132-15622221)
chr5 (1-90)||(30574271-30574360)
chr5 (1-90)||(33823588-33823677)
chr5 (2-98)||(17489437-17489533)
chr5 (2-90)||(22920386-22920474)
chr5 (1-100)||(14914458-14914556)
chr5 (1-90)||(3263402-3263491)
chr5 (1-98)||(8959248-8959345)
chr5 (1-66)||(9957119-9957184)
chr5 (1-90)||(12512881-12512970)
chr5 (1-90)||(19271947-19272036)
chr5 (1-90)||(38010960-38011049)
chr5 (2-90)||(12417715-12417803)
chr5 (2-90)||(32634797-32634885)
chr5 (1-56)||(4173052-4173107)
chr5 (1-90)||(9594566-9594655)
chr5 (1-90)||(9596708-9596797)
chr5 (2-83)||(12401281-12401362)
chr5 (3-56)||(28501707-28501760)
chr5 (1-57)||(2051014-2051070)
chr5 (2-66)||(5698246-5698310)
chr5 (2-90)||(11464017-11464105)
chr5 (2-66)||(26626737-26626801)
chr5 (2-97)||(4292872-4292967)
chr5 (1-56)||(4954554-4954609)
chr5 (1-56)||(10522863-10522918)
chr5 (1-55)||(8955587-8955641)
chr5 (1-66)||(26627418-26627483)
chr5 (1-90)||(36548274-36548363)
chr5 (1-97)||(372607-372703)
chr5 (1-57)||(27005404-27005460)
chr5 (2-66)||(40201038-40201102)
chr5 (2-41)||(34400706-34400745)
chr5 (4-55)||(35616730-35616781)
chr5 (3-66)||(41210432-41210495)
chr5 (1-55)||(10469876-10469930)
chr5 (1-55)||(12612946-12613000)
chr5 (1-55)||(17574153-17574207)
chr5 (2-56)||(28904081-28904135)
chr5 (2-56)||(28940476-28940530)
chr5 (2-64)||(35098652-35098714)
chr5 (1-55)||(43152989-43153043)
chr5 (2-55)||(3518272-3518325)
chr5 (1-90)||(7077233-7077322)
chr5 (1-66)||(20985447-20985512)
chr5 (1-90)||(25345426-25345515)
chr5 (1-90)||(30776707-30776796)
chr5 (2-98)||(3154529-3154625)
chr5 (1-57)||(11880914-11880970)
chr5 (2-66)||(35595904-35595968)
chr5 (4-96)||(39032492-39032584)
[»] chr6 (31 HSPs)
chr6 (6-98)||(1803962-1804054)
chr6 (1-96)||(6435124-6435219)
chr6 (1-96)||(12441615-12441710)
chr6 (1-97)||(11017470-11017566)
chr6 (1-97)||(33491826-33491922)
chr6 (1-67)||(17835700-17835766)
chr6 (1-90)||(237292-237381)
chr6 (1-90)||(3339393-3339482)
chr6 (1-66)||(12044418-12044483)
chr6 (2-90)||(3660247-3660335)
chr6 (6-90)||(27334957-27335041)
chr6 (6-90)||(27395697-27395781)
chr6 (2-90)||(29376610-29376698)
chr6 (1-56)||(21210344-21210399)
chr6 (2-55)||(608590-608643)
chr6 (1-98)||(1897774-1897870)
chr6 (1-90)||(15364747-15364836)
chr6 (1-90)||(29467442-29467530)
chr6 (1-58)||(32644700-32644757)
chr6 (2-90)||(2056872-2056960)
chr6 (2-81)||(11635706-11635783)
chr6 (2-54)||(12151787-12151839)
chr6 (2-90)||(17902586-17902674)
chr6 (1-30)||(2886703-2886732)
chr6 (1-66)||(12177654-12177719)
chr6 (1-90)||(15328577-15328666)
chr6 (1-30)||(16533214-16533243)
chr6 (2-55)||(19713083-19713136)
chr6 (2-98)||(2582751-2582846)
chr6 (1-97)||(14094999-14095095)
chr6 (1-37)||(24437532-24437568)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-90)||(249036-249124)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-90)||(31194-31283)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-90)||(88896-88985)
scaffold0003 (1-42)||(337206-337247)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-90)||(9518-9607)
[»] scaffold0172 (1 HSPs)
scaffold0172 (2-90)||(17064-17152)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-90)||(3448-3538)
[»] scaffold0086 (1 HSPs)
scaffold0086 (2-92)||(17222-17312)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-66)||(31518-31583)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-66)||(48742-48807)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-42)||(124245-124286)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-90)||(18683-18771)


Alignment Details
Target: chr4 (Bit Score: 107; Significance: 9e-54; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 40173487 - 40173369
Alignment:
Q  103 ctatagagagggcaccggtgagagagaaggcatataatcaaaattctagctcttaaggacatgcatgttaagagcatgaacaatgatggatgttttgtct 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40173487 ctatagagagggcacgggtgagagagaaggcatataatcaaaattctagctcttaagaacatgcatgttaagagcatgaacaatgatggatgttttgtct 40173388  T
Q  203 acttggcacaagttaaata 221  Q
    |||| ||||||||||||||    
T  40173387 acttagcacaagttaaata 40173369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15515872 - 15515967
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| |||||||| ||   |||| |||||||||||||| ||| |||| || |||||||||| |||||||||||||||    
T  15515872 ctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaggttgtcatcaaagttgttttcaaatagatgttcatatatcactactc 15515967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19720624 - 19720529
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||| |||||||||| |||||| | |||| |||  |||||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  19720624 ctttttctctcttcattgtttttgaccaattataaaagagagaaacaaggttgtcatcaaagttgtcttcaaatggatgtacatatatcactactc 19720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2193792 - 2193697
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||| ||| ||||| | || | |||||||| ||||||||||||    
T  2193792 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatatcactactc 2193697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5208310 - 5208221
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  5208310 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 5208221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27001392 - 27001303
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  27001392 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 27001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31221501 - 31221590
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||  ||||||||| || ||| |||||||| ||||||    
T  31221501 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaaattgtcatggaattgatgtacaaatatca 31221590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 32079202 - 32079295
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    |||||||||||||||||| | ||||||||||| |||| |||||||||||||  ||| ||||  ||||||  ||||||| |||||||||||||||    
T  32079202 tctctctccattgtttttgatcaataagaaaagagaaaaacaaggttgtcactaaagttgttatgaaatgtatgtacaaatatcactactcttc 32079295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47105999 - 47106088
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  47105999 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 47106088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 9032869 - 9032957
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| |||||||| |||| |||| |||||||||||||  ||| ||||  |||||| |||||||| ||||||    
T  9032869 tttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatca 9032957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15638218 - 15638313
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||||||||||  |||||||||| | |||| |||||||||||||  ||| ||||| | || | |||||||| ||||||||||||    
T  15638218 ctttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 15638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25936328 - 25936422
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||| |||| || || | || |||||| |||| | ||||||||    
T  25936328 ctttttctctctccattgtttttgaccaataagaaaagagaaaaacaagattgtcacaaaagttatcatcaattagatgcacatgtgtcactact 25936422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 32365649 - 32365555
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||||||||| |||||||| || | |||| || || ||| |||| ||| || || | ||||||||||||||||||||||||||    
T  32365649 tttttctctctccattgtttttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtacatatatcactactc 32365555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 35824098 - 35824005
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||||| ||| ||||||||  |||| |||||| ||| ||| ||| |||| || |||| |||||||||||||||||||||||    
T  35824098 tttctctctccattgtttttgacctataagaaatgagaa-aacaagattgacatcaaagttgtttttaaatggatgtacatatatcactactctt 35824005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43358701 - 43358798
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    ||||||||||||| |||| |||| |||||| | || | |||| ||||| ||||||||||||||||| || ||| ||||||||| |||||||||||||||    
T  43358701 ctttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaaattgt-ttaaaaaagatgtacaaatatcactactcttc 43358798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8026747 - 8026658
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||| ||||| || ||| |||||||| ||||||    
T  8026747 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatca 8026658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13267461 - 13267365
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||| |||| ||| ||||  |||||| ||| |||| ||||||||||||||    
T  13267461 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttttcatcaaagttgt-atgaaatcgatttacaaatatcactactctt 13267365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18568798 - 18568701
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||| |||||||||| ||||||||||| | |||| | |||||||||||  ||| ||||| | || | |||||||| ||||||||||||||    
T  18568798 ctttttctctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctt 18568701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37022349 - 37022438
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||||||||||||||| |||||||| ||||||||| |||||| || |||  ||| ||||| |||||| |||||||| ||||||    
T  37022349 ctttttatctctccattgtttttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatggatgtacaaatatca 37022438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44368185 - 44368096
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| || ||||||||||  ||| ||||| |||||| |||||||| ||||||    
T  44368185 ctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaatatca 44368096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 51377276 - 51377187
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| |||||  | ||| |||||||| ||||||    
T  51377276 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaatatca 51377187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32901417 - 32901513
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||||||||||||| |||||||| || | |||| |||||| ||||||  |||||| || | || | |||||||| |||||||||||||    
T  32901417 ctttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatatcactactct 32901513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 41495101 - 41495193
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcacta 93  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  |||||| || | || ||||| |||| |||||||||    
T  41495101 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaaattatcatcaattagatatacaaatatcacta 41495193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7037467 - 7037380
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatat 88  Q
    ||||||||||||||||||||||| |||||||||||   |||| ||||||||||||   ||| ||||| || |||||||||||| ||||    
T  7037467 ctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatggaatagatgtacaaatat 7037380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 11568899 - 11568804
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaa-aaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||||||||| |||||||| || |||| || ||||||||| |||| ||| |||| || |||| ||| || ||||||||||||||    
T  11568899 tttttctctctccattgtttttgaccaataaaaagaaaaaaaaaacaaggttatcatcaaagttgtgttcaaatggatttaaatatatcactactc 11568804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49424803 - 49424748
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||    
T  49424803 ctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtca 49424748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 36728604 - 36728550
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||| |||||||    
T  36728604 tttttctctctccattgttttttaccaataagaagagagaaaaacaaagttgtca 36728550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3223077 - 3223166
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| || ||||||||||  ||| || || || ||| |||||||| ||||||    
T  3223077 ctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatca 3223166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4896483 - 4896387
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||||||||| |||||| | || | |||| ||  ||||||||| |||| |||| || |||||||||| || ||||||||||||||    
T  4896483 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcactactctt 4896387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48650239 - 48650186
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  48650239 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt 48650186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22920254 - 22920159
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||| || |||| |||| |||||| | || | |||| ||||| |||||||||||| |||| | |||| ||||||||| ||||||||||||    
T  22920254 ctttttctctttctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaagttgtttagaaaaagatgtacaaatatcactactc 22920159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22971545 - 22971640
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||| || |||| |||| |||||| | || | |||| ||||| |||||||||||| |||| | |||| ||||||||| ||||||||||||    
T  22971545 ctttttctctttctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaagttgtttagaaaaagatgtacaaatatcactactc 22971640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26440751 - 26440806
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |  ||||||||||    
T  26440751 ctttttctctctccattgtttttgaccaataaaaaaaaagaaaataaaggttgtca 26440806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41170860 - 41170955
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||| ||||||||| |||||| | |  |||||||| ||||||||||  |||| ||||||  |||| | ||||||||||||| |||||    
T  41170860 ctttttctctctctattgtttttgaccaatgaaatgaaagaatagcaaggttgtcccaaaagttgtctaaaaatggttgtacatatatcattactc 41170955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47519703 - 47519648
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||| ||||| || |||||||| |||||| |||||||||||||    
T  47519703 ctttttctctctccattatttttaactaataagaagaaagaaaaacaaggttgtca 47519648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 46844223 - 46844145
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgt 80  Q
    |||||||||||||||||||||| |||||||| || | |||| ||||| |||||||  ||| ||||| | ||||||||||    
T  46844223 tttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgt 46844145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18874907 - 18874842
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||  |||||||||||||| ||||    
T  18874907 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgt 18874842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 20056472 - 20056565
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||| ||||||||| ||||||||||| | |||| | |||| ||||||  ||| ||||| | || | |||||||| ||||||||||||    
T  20056472 ttttctctctcaattgtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 20056565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 20632628 - 20632535
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||||||| ||||||| ||| | | || || || |||||||  ||||||||| | || | |||||||| |||||||||||||    
T  20632628 tttctctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatatcactactct 20632535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24235408 - 24235497
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |  ||  ||||||  ||| ||||| |||||| |||||||| ||||||    
T  24235408 ctttttctctctccattgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaatatca 24235497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28899199 - 28899134
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||| ||| |||||||| || |||||| | ||||||||||  |||||||||    
T  28899199 ctttttctctctccattgtgtttgaccaataaaaagaaagaacatcaaggttgtcccaaaaattgt 28899134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45678351 - 45678404
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||||||||||||||||||| |||||||| || | |||| |||||||||||    
T  45678351 ctttttctctctccattgtttttgaccaataaaaagagagaacaacaaggttgt 45678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 53292238 - 53292291
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||||||||||||||||||| |||||||| || | |||| |||||||||||    
T  53292238 ctttttctctctccattgtttttaaccaataaaaagatagaacaacaaggttgt 53292291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 55267984 - 55267895
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||| |||| ||||||||||| | |||| ||||||||| |||  ||| ||||  || ||||| |||||| ||||||    
T  55267984 ctttttctctctccattgcttttgaccaataagaagagagaaaaacaaggttatcactaaagttgttatggaataggtgtacaaatatca 55267895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 925045 - 924989
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| | |||||| || | |||| ||||||||||||||    
T  925045 ctttttctctctccattgtttttgatcaataaaaagatagaaaaacaaggttgtcat 924989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 9096026 - 9096077
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    |||||| ||||||||||||||| |||||||| ||||||||| |||||||||||    
T  9096026 tttttccctctccattgtttttgaccaataa-aaaaaagaacaacaaggttgt 9096077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 29577418 - 29577354
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||| | || | |||| ||||||||||||  |||||||||    
T  29577418 tttttctctctccattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgt 29577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 33484088 - 33483993
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||||||||| | ||||||||| | |||| |  ||||||||||  ||| ||||| | || | |||||||| |||||| ||||||    
T  33484088 tttttctctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcattactct 33483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 40847458 - 40847510
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||||||||||  ||||| |||| || ||||||||||    
T  40847458 tttttctctctccattgttttttaccaat--gaaaagagaaaaagaaggttgtca 40847510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 1728069 - 1728007
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||| ||||||||| ||||||||||| |||  | ||||||||||||  |||||||||    
T  1728069 tttctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgt 1728007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 36512931 - 36512961
Alignment:
Q  2 tttttctctctccattgttttttaccaataa 32  Q
    |||||||||||||||||||||||||||||||    
T  36512931 tttttctctctccattgttttttaccaataa 36512961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1796453 - 1796541
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| ||||| | |||||  ||| ||||| || ||| |||||||| ||||||    
T  1796453 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaag-tgtcactaaagttgtcatggaatggatgtacaaatatca 1796541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18634789 - 18634854
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||  ||| ||||||||||| ||||||||| | |||| || ||||||||| ||||||||||    
T  18634789 ctttttcttcctcgattgttttttatcaataagaagagagaaaaataaggttgtcttaaaaattgt 18634854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 24154704 - 24154786
Alignment:
Q  5 ttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatc 89  Q
    ||||||||||||||||||| ||||| |  ||||||||| || |  |||||||| |||||| || | ||||||||||||| |||||    
T  24154704 ttctctctccattgtttttgaccaaca--aaaaaagaaaaatatagttgtcatcaaaattatcattaaatagatgtacaaatatc 24154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24310503 - 24310450
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| || ||||| |||| || | ||||||||||||    
T  24310503 tttttctctctccattgtttttgactaataaaaaaagagcacaacaaggttgtc 24310450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31413769 - 31413704
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||| ||||| |||||||| || | || | ||||||||||||| |||| ||||    
T  31413769 ctttttctctctccattatttttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgt 31413704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33776982 - 33777047
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||| |||||||||| |||||||| || | |||| ||||||||| ||  |||||||||    
T  33776982 ctttttctctcttcattgtttttgaccaataaaaagagagaacaacaaggttatcccaaaaattgt 33777047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43982985 - 43983050
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||| || ||||| ||||| ||||    
T  43982985 ctttttctctctccattgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgt 43983050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 46173625 - 46173654
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  46173625 ctttttctctctccattgttttttaccaat 46173654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 53763793 - 53763740
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||| |||  |||| |||||| |||||||||||||| |||||||||    
T  53763793 tttttctctctctatttattttgaccaatgagaaaaaagaataataaggttgtc 53763740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 53781819 - 53781766
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| |||||| | || | || ||||||||||||||    
T  53781819 tttttctctctccattgtttttgaccaatgaaaagagagcataacaaggttgtc 53781766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 55642588 - 55642495
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactac 94  Q
    ||||||||||||||||| |||||||||||||| || | | || | |||||||||||  ||| || || | || | |||||||| ||||||||||    
T  55642588 ctttttctctctccattattttttaccaataaaaagagataaaagcaaggttgtcaccaaagttatcattaattggatgtacaaatatcactac 55642495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 8614275 - 8614335
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||| ||||||||| ||||||||||| |||  | ||||||||||||  |||||||||    
T  8614275 tctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgt 8614335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 24019949 - 24019865
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||| ||||||| |||||| | || | |||  |||||||||||||  ||| ||||| | ||||||||||||| ||||||    
T  24019949 tctctctccaatgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgtacaaatatca 24019865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29949656 - 29949600
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||| || ||||||||||||||||||||| | |||| || || ||||||||    
T  29949656 ctttttctctatctattgttttttaccaataagaagagagaaaaagaaagttgtcat 29949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34027984 - 34028040
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||  ||||||||||    
T  34027984 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcat 34028040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40721947 - 40721891
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||| ||||| |||||||| |||| |||| |||||  |||||||    
T  40721947 ctttttctctctccattatttttgaccaataaaaaaagagaaaaacaatattgtcat 40721891  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 46799845 - 46799908
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||| |||| |||||| |||| | |||| ||||||||||||  |||||||||    
T  46799845 tttttctctctccattg-ttttgaccaatgagaatagagaacaacaaggttgtcccaaaaattgt 46799908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 53662420 - 53662336
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||| |||||||||| || |||||||| | |||| |||||  || |||  ||| ||||| |||||| |||||||||||||||    
T  53662420 tctctcttcattgtttttgactaataagaagagagaaaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatca 53662336  T

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Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 37149453 - 37149361
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37149453 tctctctctattgttttttaccaataagaagaaagaaaaacaaggttgtcataaaagttgtcttgaaatagatgtacatatatcactactctt 37149361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25614804 - 25614709
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||  ||||||||| | || |||||||||| |||||| |||||    
T  25614804 ctttttctctctccattgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattagatgtacaaatatcattactc 25614709  T

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Target: chr7; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30864400 - 30864311
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  30864400 ctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 30864311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37385216 - 37385119
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||  ||| ||||| | || | |||||||| ||||||||||||||    
T  37385216 ctttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctt 37385119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42431811 - 42431906
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| |||||| |||||    
T  42431811 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattactc 42431906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25272679 - 25272744
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |||| ||||    
T  25272679 ctttttctctctccattgttattgaccaataagaagaaagaataacaaggttgtcacaaaagttgt 25272744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 47530273 - 47530185
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||| ||||||||||||||||  |||||||||| |||||| ||||||||| |||  ||| ||||| ||||||||||||||| ||||||    
T  47530273 tttttttctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatatca 47530185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33050271 - 33050360
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||| ||||||||| ||||||||||| | |||  |||||||||||||  ||| ||||| |||||| |||||||| ||||||    
T  33050271 ctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatca 33050360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 44175633 - 44175722
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| |||||| || ||| ||||||  ||| ||||| || |||||||||| | ||||||    
T  44175633 ctttttctctctccattgtttttgaccaataagaagaaagaaaaagaagattgtcactaaagttgtcgtggaatagatgtataaatatca 44175722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 116720 - 116808
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| || ||||| || |||||| |||||| ||||||  ||| ||||| |||||| |||||||| ||||||    
T  116720 tttttctctctccattgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatca 116808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 8742472 - 8742568
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||||| | | ||||||||| | |||| |||||||||||||  ||| ||||| | || | |||||||| ||||||||||||||    
T  8742472 tttttctctctccattgtttatgatcaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctt 8742568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39369390 - 39369445
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||    
T  39369390 ctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtca 39369445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22331194 - 22331129
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||||||||||| | || | || ||||||||||||||  |||||||||    
T  22331194 ctttttctctctccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgt 22331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 26041398 - 26041487
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  26041398 ctttttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatca 26041487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27164820 - 27164731
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||| | |||||||||||| ||||||||||| | |||| ||||| |||||||  ||||||||| || ||| |||||||| ||||||    
T  27164820 ctttttctttttccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatca 27164731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38978580 - 38978668
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| |||||||||||||  ||| ||||| |||||  |||||||| ||||||    
T  38978580 ctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaa-ggatgtacaaatatca 38978668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 30402168 - 30402087
Alignment:
Q  7 ctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| ||||||||||||||||||| || |||||  ||||| |||||||  |||||| || ||||||||||||||| ||||||    
T  30402168 ctctcttcattgttttttaccaataaaaagaaaga--aacaaagttgtcaccaaaattatcatgaaatagatgtacaaatatca 30402087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 40077344 - 40077408
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||| |||||||||| ||||||||||| |||||| ||  |||||||||||||| ||||    
T  40077344 tttttctctcttcattgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgt 40077408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48086947 - 48087003
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| ||||||||||||| |||  |||||| |||||||    
T  48086947 ctttttctctctccattgtttttgaccaataagaaaagagagaaacaagattgtcat 48087003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 10014937 - 10014842
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||||||||| |||||||| || | |||| |||||  ||||||  ||| ||||| | || | |||||||| |||||||||||||    
T  10014937 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatcactactct 10014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 10161912 - 10161858
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||| |||||||| || |||||| ||||| |||||||    
T  10161912 tttttctctctccattgtttttgaccaataaaaagaaagaaaaacaaagttgtca 10161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 35590774 - 35590712
Alignment:
Q  5 ttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtc 67  Q
    ||||||||| ||||||||| |||||||| || |||||| ||||||||||||  ||||||||||    
T  35590774 ttctctctctattgtttttaaccaataataagaaagaacaacaaggttgtcccaaaaattgtc 35590712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5900974 - 5901063
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| |||||||| ||||| |||| |||| || ||| || |||  ||| ||||| |||||| |||||||| ||||||    
T  5900974 ctttttctctctccattattttttactaataacaaaagagaaaaataagattatcactaaagttgtcatgaaattgatgtacaaatatca 5901063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 23034295 - 23034242
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||| ||||||||| ||||||||||||| || | ||||||||||||    
T  23034295 tttttctctctctattgtttttgaccaataagaaaagagcacaacaaggttgtc 23034242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 32315919 - 32316008
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    |||||||| ||||||||| ||||||||||| | |||| ||||| ||||||| |||| ||||| | |||||| ||| || |||||| ||||    
T  32315919 tctctctctattgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 44511227 - 44511316
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||| ||||||||||| ||||||||||||| |||| |||||  ||||||  ||| ||||| | |||| |||||||| ||||||    
T  44511227 ctttttttctccccattgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatggatgtacaaatatca 44511316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48866913 - 48866817
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||||||||| || ||| | || | |||| ||  ||||||||| |||| |||| || |||||||||| || ||||||||||||||    
T  48866913 ctttttctctctccattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcactactctt 48866817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49142500 - 49142435
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||| ||||||||||||| || |||||| |||| ||| |||||||||||||||| |||| ||||    
T  49142500 ctttttttctctccattgttattgaccaatgagaagaaaaaataacaaggttgtcacaaaagttgt 49142435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 2347041 - 2346953
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| |||| |||||||| || |||||| || ||||||||||  ||| ||||| | ||||  ||||||| ||||||    
T  2347041 tttttctctctccattgcttttgaccaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaatatca 2346953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30180595 - 30180690
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||||||||||||| ||| || | || | |||| ||  ||||||||  ||||||||| || |||||||||| || |||||||||||||    
T  30180595 ctttttctctctccattgtttttgacccatgaaaagagagaaaaaagaggttgtcgcaaaaattgt-ttcaaatagatgttcaaatatcactactct 30180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 44187780 - 44187844
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||| | ||||||||| || || |||||||| ||| ||||    
T  44187780 tttttctctctccattgtttttgaccaatgaaaaaaaagaacaataaagttgtcatgaaagttgt 44187844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48522244 - 48522300
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||| ||||||||| |||||||| || |||||| ||||| ||||||||    
T  48522244 ctttttctctctctattgtttttgaccaataacaagaaagaacaacaaagttgtcat 48522300  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 7295560 - 7295651
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||| ||||||||| |||||| |||| | ||||||||||||||||   |||| ||||||  ||| || |||||| |||||| ||||||    
T  7295560 tctctctctattgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgtctcaaaaaagttgtacaaatatcattactct 7295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33056704 - 33056767
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaatt 64  Q
    ||||||||||||||||||||||| |||||||| |||| || | ||  |||||||||| ||||||    
T  33056704 ctttttctctctccattgtttttgaccaataaaaaaacagtaaaatgaggttgtcattaaaatt 33056767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34349010 - 34348912
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttca 100  Q
    |||||||||||||||||||||||||||||| | || | |||  ||  | ||||| | |||| ||||  |||||||||||| || ||||||||||||||||    
T  34349010 ctttttctctctccattgttttttaccaatgaaaagagagagaaaagaagttgttaaaaaagttgt-atgaaatagatgttcaaatatcactactcttca 34348912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 38990190 - 38990245
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||| |||||||||||||| |||||||| || | |||| ||||||||||||||    
T  38990190 tttttctttctccattgtttttgaccaataaaaatagagaaaaacaaggttgtcat 38990245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40108212 - 40108267
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||| |||| || || |||||| |||| ||||||||||||||||||||    
T  40108212 ctttttctctcttcattattattgaccaatgagaagaaagaataacaaggttgtca 40108267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42942362 - 42942307
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||| |||||||||||||| | ||||||||| | |||| |||||||||||||    
T  42942362 ctttttctttctccattgtttttaatcaataagaatagagaaaaacaaggttgtca 42942307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 2005818 - 2005872
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||| |||||||||| ||||||||||| | |||| ||||| |||||||    
T  2005818 tttttctctctgcattgtttttaaccaataagaagagagaaaaacaaagttgtca 2005872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2600517 - 2600463
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||| ||||||    
T  2600517 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 2600463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 8061727 - 8061694
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaa 35  Q
    |||||||||||||||||||||| |||||||||||    
T  8061727 tttttctctctccattgtttttgaccaataagaa 8061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21037219 - 21037122
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||| |||| ||| || | || | |||| ||||| ||||||||  || |||| | |||| || |||||| ||||||||||||||    
T  21037219 ctttttctctctccattgattttgaccgatcaaaatagagaaaaacaaagttgtcatggaagttgtttagaaagaggtgtacaaatatcactactctt 21037122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 25427810 - 25427843
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaa 35  Q
    |||||||||||||||||||||| |||||||||||    
T  25427810 tttttctctctccattgtttttgaccaataagaa 25427843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29162262 - 29162173
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| | |||||| || | |||| |||||| ||||||  ||| ||||| || |||  ||||||| ||||||    
T  29162262 ctttttctctctccattgtttttgatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatca 29162173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 29923760 - 29923813
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||| ||||||||| ||||||||||||| |  | ||||||||||||    
T  29923760 tttttctctctctattgtttttgaccaataagaaaagaacacaacaaggttgtc 29923813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33465020 - 33464955
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||| || | |||| | || ||| |||||||||||||||| |||| ||||    
T  33465020 ctttttctctctccattgttattgatcaatgaaaagaaaaaataacaaggttgtcacaaaagttgt 33464955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41910168 - 41910103
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||| ||||||||| ||||||||||| | |  | |||||||||||| ||||| ||||    
T  41910168 ctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgt 41910103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 44894457 - 44894428
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  44894457 ctttttctctctccattgttttttaccaat 44894428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1790079 - 1790135
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||  | |||||||||||    
T  1790079 ctttttctctcttcattgattttgaccaataagaaaagagaaacataaggttgtcat 1790135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1838443 - 1838347
Alignment:
Q  1 ctttttctctctccattgtttttt-accaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||| ||| ||||||||||| | ||||||||| | | || |||||||||||||  ||| ||||| | || | |||||||| ||||||||||||    
T  1838443 ctttttctttcttcattgttttttgatcaataagaagagaaaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 1838347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 33684769 - 33684797
Alignment:
Q  2 tttttctctctccattgttttttaccaat 30  Q
    |||||||||||||||||||||||||||||    
T  33684769 tttttctctctccattgttttttaccaat 33684797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 35005077 - 35005033
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaagg 50  Q
    |||||||||||||||||| ||||||||||| | |||| |||||||    
T  35005077 tctctctccattgtttttgaccaataagaagagagaaaaacaagg 35005033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 37325801 - 37325729
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaat 74  Q
    |||||||||||||||||||||| |||||||| || | |||| |||||  ||||||  |||||| || ||||||    
T  37325801 tttttctctctccattgtttttaaccaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaat 37325729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42476551 - 42476455
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||| |||||||| |||||||| || | | || ||||||||||||   ||| ||||| | || | |||||||| ||||||| |||||    
T  42476551 ctttttctctctccgttgtttttgaccaataaaaagagaaaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatcaccactct 42476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 10466170 - 10466075
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||||||||| || |||||||||| |||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  10466170 tttttctctctccattgtttttgactaataagaaaagagaaaaacaaagttgtcatgaaagttgtcttgaaacagatgtacatatatcactactct 10466075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17826135 - 17826229
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    |||||||||||| ||||||||||||| |||||||| | |||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  17826135 ctttttctctcttcattgttttttactaataagaagagagaaaaacaaggttgtcatgaaagttgtcttaaaatagatgtacatatatcactact 17826229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31847619 - 31847716
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaa-aagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||||||||||||| |||||||| |||| || || |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||    
T  31847619 ctttttctctctccattgtttttgaccaataaaaaaagaaaaaaaacaaggttgtcatgaaagttgtctacaaatggatgtacatatatcactactct 31847716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30973974 - 30973879
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| |||||||| ||   |||| ||||| ||| |||| ||||||||||| |||| ||||| |||||||||||||||    
T  30973974 ctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaaaattgtcttcaaatggatgttcatatatcactactc 30973879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36909826 - 36909732
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||| ||| ||||  |||||| |||||||| ||||||||||||    
T  36909826 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatggatgtacaaatatcactactc 36909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 37966446 - 37966533
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| |||||| |||||||| ||||||    
T  37966446 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatca 37966533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23048066 - 23047977
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  23048066 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 23047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5962726 - 5962821
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||| |||  |||||| || | || |||||||||| ||||||||||||    
T  5962726 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcaccaaaattatcatcaattagatgtacaaatatcactactc 5962821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36383550 - 36383632
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtaca 83  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||  |||||| ||||||||    
T  36383550 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatgaaattgatgtaca 36383632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33030085 - 33029996
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||  |||||||| || | |||| |||||||||||||| ||| ||||| | | ||||||||||| ||||||    
T  33030085 ctttttctctctccattgttttcaaccaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatagatgtacaaatatca 33029996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44484639 - 44484550
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  44484639 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattgatgtacaaatatca 44484550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14954582 - 14954526
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||||||||||||||||||||||| | |||| |||| ||||||||||||||    
T  14954582 ctttttctctctccattgttttttaccaattaaaaaagagaaaaacaaggttgtcat 14954526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 29871337 - 29871249
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| ||||||||||| | |||  ||||| |||||||  ||| ||||| ||||||||||| ||| ||||||    
T  29871337 tttttctctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgtcatgaaatagatggacaaatatca 29871249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 37076742 - 37076806
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||| ||||||||||||| || |||||| |||| |||||||||||||||||||| |||||||||    
T  37076742 tttttttctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaaattgt 37076806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 15227036 - 15226946
Alignment:
Q  5 ttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||| ||||||||||| ||| || ||||| ||| |||| ||| |||| |  | ||||||||||||||||||||||||    
T  15227036 ttctctctccattgtttttgaccaataagaagaaataaaaacaaagttatcatgaaagttgt-tcaacatagatgtacatatatcactactc 15226946  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34442201 - 34442295
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| |||||||| || | |||  ||  ||||||||| ||||||||| || |||||||||| || ||||||||||||    
T  34442201 ctttttctctctccattgtttttgaccaataaaaagagagagaaaagaggttgtcagaaaaattgt-ttcaaatagatgttcaaatatcactactc 34442295  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3196070 - 3195972
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| ||||||||||| |  ||| ||||| || ||| |||||||| |||||| | ||||||    
T  3196070 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctcttc 3195972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4263847 - 4263782
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||||| |||| ||  | |||||||||||||||||    
T  4263847 ctttttctctctccattgtttttgaccaatgagaaaagagaaaaaagaagttgtcataaaaattgt 4263782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8757632 - 8757685
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  8757632 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt 8757685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10688029 - 10688118
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| ||||||||| |||| ||| ||| | || ||| |||||||| ||||||    
T  10688029 ctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttttcattaaagttgccatggaatggatgtacacatatca 10688118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38246734 - 38246645
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||| ||||||||||||| ||||||||||| | |||  |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  38246734 ctttttctccctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaattgatgtacaaatatca 38246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 9384464 - 9384560
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||||| || ||||||  ||| ||||||||||||| |||||| |||| |||| || ||| || ||| || ||| ||||||||||    
T  9384464 tttttctctctccattgttattgaccaatgcgaagaaagaataacaagattgtcacaaaagttgtattaaaagagttgttcaaataacactactctt 9384560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10550442 - 10550346
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||||||||||||| |||||||| || | |||| ||||| |||||||  ||| ||||| | |||| ||||| || |||||| ||||||    
T  10550442 ctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 42678638 - 42678727
Alignment:
Q  5 ttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||| || |||||||| || | ||||  |||||||| || | ||| ||||| |||||| |||||||||||||||||||||    
T  42678638 ttctctctccattgttattgaccaataaaaagagagaa--acaaggttctcgtcaaagttgtcatgaaatggatgtacatatatcactactc 42678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 6365274 - 6365364
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcact 92  Q
    |||||||||||| |||||||||| |||||||| || | |||| ||  |||||||||||||| |||| || |||||||||| || ||||||||    
T  6365274 ctttttctctcttcattgtttttgaccaataaaaagagagaaaaaagaggttgtcataaaagttgt-tttaaatagatgttcaaatatcact 6365364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 34853105 - 34853015
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaatt-gtcttgaaatagatgtacatatatcact 92  Q
    ||||||||||| |||| ||||| || ||||| |||||| || |||||| ||||||| |||||| ||||| ||||| ||||||||||||||||    
T  34853105 tttttctctcttcattatttttgacaaataaaaaaaaaaaa-aacaagattgtcatcaaaatttgtcttcaaataaatgtacatatatcact 34853015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35798297 - 35798360
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaatt 64  Q
    ||||||||||||||||||||||| |||||||| || |||| | ||||||||||||  |||||||    
T  35798297 ctttttctctctccattgtttttaaccaataaaaagaaagcacaacaaggttgtcccaaaaatt 35798360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 36582346 - 36582433
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||| |||||||||| |||||| |||| | |||| |||||||||||||  ||| ||||| | |||| |||||||| ||||||    
T  36582346 ttttctctcttcattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatca 36582433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 38795449 - 38795504
Alignment:
Q  2 tttttctctctccattgttttttaccaat-aagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||    
T  38795449 tttttctctctccattgtttttgaccaataaaaaaaaaagaaaaacaaggttgtca 38795504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19631476 - 19631530
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||    
T  19631476 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtc 19631530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19828377 - 19828431
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||    
T  19828377 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtc 19828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 33857306 - 33857384
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgt 80  Q
    |||||||||||||||||||||| ||||||||||| | |||| || || |||||||  ||| ||||| | ||||||||||    
T  33857306 tttttctctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaatagatgt 33857384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3585714 - 3585811
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||| || |||| |||| | |||| | || | |||| ||||| |||||||||||| |||| | |||| ||||||||| ||||||||||||||    
T  3585714 ctttttctctttctattgattttgatcaatcaaaatagagaaaaacaaagttgtcataaaagttgtttagaaaaagatgtacaaatatcactactctt 3585811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30413715 - 30413626
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| |||||| | || | |||| | ||| |||||||  ||||||||| | |||| |||||||| ||||||    
T  30413715 ctttttctctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 30413626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37631350 - 37631285
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||  |||||||||||||| ||||    
T  37631350 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgt 37631285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 44018229 - 44018137
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||| |||||||||  ||||||||||||| |||| |||||| || |||| ||| ||||| | ||||  ||||| ||||||||||||||    
T  44018229 ttttctctcttcattgttttg-accaataagaaaagagaaaaacaagattttcattaaagttgtcattaaatgaatgtagatatatcactactc 44018137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3299088 - 3299008
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgta 81  Q
    ||||||||||||||||||||||| ||||||||||| | |||  || ||| ||||||  |||||| || | |||||||||||    
T  3299088 ctttttctctctccattgtttttaaccaataagaagagagagaaataagattgtcaccaaaattatcattaaatagatgta 3299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 6884999 - 6885087
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||| |||||||||||||| || |||||||| | |||| ||||| |||||||  ||| ||||| ||||||  ||||||| ||||||    
T  6884999 tttttctatctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaatgaatgtacaaatatca 6885087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12256990 - 12257054
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||| ||||||||| ||||||||||| |||  | ||||||||||||  |||||||||    
T  12256990 tttttctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgt 12257054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 27307223 - 27307139
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||| ||||||||||| | |||| || ||||||||||  ||| ||||| || ||| |||||| | ||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatggaatggatgtataaatatca 27307139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 30192333 - 30192237
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||| ||||||||||||||||||||||| |||| |||| | ||||||| || |  ||||| || | || | |||||||| |||||| |||||||    
T  30192333 tttttctttctccattgttttttaccaataaaaaaagagaaaagcaaggttttcgtccaaattatcatcaattggatgtacaaatatcattactctt 30192237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 36763502 - 36763438
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||| |||||||| |||||| | || | |||| || ||||||||||||||||||||    
T  36763502 tttttctctctccgttgtttttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgt 36763438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12192035 - 12192090
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| |||||||| || | |||| | |||||||||||    
T  12192035 ctttttctctctccattgtttttgaccaataaaaatagagaaaagcaaggttgtca 12192090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12208530 - 12208577
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaa 48  Q
    |||||||||||||||||||| || |||||| | |||||||||||||||    
T  12208530 ctttttctctctccattgttattgaccaatgaaaaaaaagaataacaa 12208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 12358402 - 12358492
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcact 92  Q
    ||||||||||| |||||||||| |||||||| || | |||| | |||||||||||  ||| ||||| | || | |||||||| ||||||||    
T  12358402 tttttctctcttcattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcact 12358492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 38572032 - 38572082
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||| ||| ||||||||||| | |||| |||||||||||||    
T  38572032 tctctctccattgtctttgaccaataagaagagagaaaaacaaggttgtca 38572082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 42141586 - 42141496
Alignment:
Q  8 tctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||| ||||||||| | ||||||||| | |||| |||||||||||||  ||| || || | |||||||||| || |||||| |||||||    
T  42141586 tctctctattgtttttgatcaataagaatagagaaaaacaaggttgtcaacaaagttatcatcaaatagatgtccaaatatcattactctt 42141496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 3366126 - 3366179
Alignment:
Q  8 tctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaa 61  Q
    ||||||||||||| || |||||| |||| ||||||||| |||||||||| ||||    
T  3366126 tctctccattgttattgaccaatgagaagaaagaataataaggttgtcacaaaa 3366179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6639455 - 6639426
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  6639455 ctttttctctctccattgttttttaccaat 6639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20507581 - 20507524
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaa-agaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||  |||||||| ||||| |||| ||||||||| ||||    
T  20507581 ctttttctctctccattgttttagaccaataaaaaaaatagaaaaacaaggttatcat 20507524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 28301951 - 28302032
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtaca 83  Q
    ||||||| ||| |||||||||| || |||||||||| | || ||||  |||||||| |||||| || | |||||||||||||    
T  28301951 tttttctttcttcattgtttttgactaataagaaaagataaaaacatagttgtcatcaaaattatcattaaatagatgtaca 28302032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 30487428 - 30487383
Alignment:
Q  8 tctctccattgttttttaccaataagaaaaaagaataacaaggttg 53  Q
    |||||||||||||||| ||||||||||| | |||| ||||||||||    
T  30487428 tctctccattgtttttgaccaataagaagagagaaaaacaaggttg 30487383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34144534 - 34144446
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||| |||| ||||||||||| | |||| |||||| ||||||  ||| ||||| || ||| || ||||| ||||||    
T  34144534 ctttttctctctccattg-ttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaattgaggtacaaatatca 34144446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 40951278 - 40951307
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  40951278 ctttttctctctccattgttttttaccaat 40951307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 43936441 - 43936396
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaa 48  Q
    ||||||||||||||||||||| |||||||| |||| |||| |||||    
T  43936441 ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaa 43936396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 694357 - 694417
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaa 61  Q
    ||||||||||||||||||||||| |||||| | |||| |||  ||  ||||||||||||||    
T  694357 ctttttctctctccattgtttttgaccaatgaaaaaagagataaatgaggttgtcataaaa 694417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 11828802 - 11828738
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||| | || | || | |||||||||||| ||||| ||||    
T  11828802 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgt 11828738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29582363 - 29582307
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||| || ||||||||||||||||||||| | |||| || || ||||||||    
T  29582363 ctttttctctatctattgttttttaccaataagaagagagaaaaagaaagttgtcat 29582307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39133810 - 39133866
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||| ||||| |||||||| |||| |||| |||||  |||||||    
T  39133810 ctttttctctctccattatttttaaccaataaaaaaagagaaaaacaaaattgtcat 39133866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 44085369 - 44085401
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaa 35  Q
    ||||||||||||||||||||||| |||||||||    
T  44085369 ttttctctctccattgttttttatcaataagaa 44085401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 48871937 - 48871843
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||||||||| || |||||| ||  |||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  48871937 tttttctctctccattgtttttgactaataaggaaggagaaaaacaaggttgtcatgaaagttgtcttgaaatagatgtacatatatcactactc 48871843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 29489341 - 29489245
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||  ||| ||||| ||||||| ||||||| |||||||| |||||    
T  29489341 tttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaatatatgtacaaatatcactgctctt 29489245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7078483 - 7078391
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcacta 93  Q
    ||||| ||||||||||||||||| |||||| |||||| |||  |||||||||||||| ||| ||||||| |||| ||||||||||||||||||    
T  7078483 cttttcctctctccattgtttttgaccaattagaaaagagagaaacaaggttgtcatcaaagttgtcttcaaatggatgtacatatatcacta 7078391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25130791 - 25130891
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttca 100  Q
    ||||||| |||| |||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| ||||||||||||||| |||||||| |||||||    
T  25130791 ctttttccctcttcattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaatatcactgctcttca 25130890  T
Q  101 a 101  Q
    |    
T  25130891 a 25130891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 26501384 - 26501472
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| ||| ||||| || |||||||||||| ||||||    
T  26501384 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatagatgtacaaatatca 26501472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43457802 - 43457708
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||| ||||| | |||||| |||| |||| |||||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  43457802 ctttttctctctccattctttttgatcaataa-aaaacagaaaaacaaggttgtcatcaaatttgtcttcaaatggatgtacatatatcactactc 43457708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42843327 - 42843231
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  |||||| || | || | |||||||| |||||||||||||    
T  42843327 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatatcactactct 42843231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11097867 - 11097776
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcact 92  Q
    ||||||||||||||||||||||| |||||| |||||| |||  || ||| ||||||| ||| ||||||| |||| |||||||||||||||||    
T  11097867 ctttttctctctccattgtttttgaccaattagaaaagagagaaaaaagtttgtcatcaaagttgtcttcaaatggatgtacatatatcact 11097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26547322 - 26547417
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||| ||||||||||||||||| |||||| | |||| |||  || ||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  26547322 cttttcctctctccattgtttttgaccaattaaaaaagagagaaataaggttgtcatcaaagttgtcttcaaatggatgtacatatatcactactc 26547417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9011733 - 9011827
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||  || |||||| |||||| |||||||| |||||| ||||    
T  9011733 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaacattgtcatgaaatggatgtacaaatatcattact 9011827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 51193115 - 51193021
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||| |||||  |||||||||| | |||| ||||| |||||||| ||| ||||| | |||| |||||||||||||||||||||    
T  51193115 tttttctctctccattatttttggccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 51193021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34395902 - 34395806
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||||||||  |||||| |||||| |||  ||||| |||||||| ||| ||||||| |||| ||| |||||||||||||||||||    
T  34395902 ctttttctctctccattgttttg-accaattagaaaagagagaaacaaagttgtcatcaaagttgtcttcaaatggatatacatatatcactactctt 34395806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7371931 - 7371842
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||| |||  ||| ||||| || ||| |||||||||||||||    
T  7371931 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcatggaatggatgtacatatatca 7371842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13813646 - 13813735
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||  || ||| |||||||| ||||||    
T  13813646 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatca 13813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27578270 - 27578359
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| |  ||||||||| || |||  ||||||| ||||||    
T  27578270 ctttttctctctccattgtttttgaccaataagaatagagaaaaacaaggttgttactaaaattgtcatggaatgaatgtacaaatatca 27578359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25995548 - 25995639
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaa--atagatgtacatatatca 90  Q
    ||||||||||||||||||||||| |||||||| || | |||| || ||||||||||| ||| ||||| ||||  ||||||||||| ||||||    
T  25995548 ctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaatatagatgtacaaatatca 25995639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 50777406 - 50777312
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    |||||| |||||| ||||||||| ||||||||||| | |||| |||||||||||||  ||||||||| | || | |||||||| |||||| ||||    
T  50777406 ctttttatctctctattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatatcattact 50777312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 50035521 - 50035432
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||| ||| ||||| |||||||| |||| |||| || || |||||||  ||| ||||| ||||||||||||||| ||||||    
T  50035521 ctttttctctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaatagatgtacaaatatca 50035432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29362675 - 29362619
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||||    
T  29362675 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcat 29362619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42256548 - 42256604
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||||||||||||||||  || ||||||| |||||| ||||||||||||||    
T  42256548 ctttttctctctccattgtttttggccgataagaagaaagaaaaacaaggttgtcat 42256604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 51168750 - 51168686
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| ||||||||||||| |||| || ||  ||||||||||| ||||    
T  51168750 tttttctctctccattgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagttgt 51168686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36669353 - 36669298
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| |||||||||||||    
T  36669353 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtca 36669298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 7420725 - 7420819
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||| |||||| || ||||||||||||| |||| || || |||||| ||||| |||||  ||||||  |||||| |||||| |||||||    
T  7420725 tttctctctctattgttcttgaccaataagaaaagagaagaaaaaagttgtcctaaaagttgtcacgaaataattgtacaaatatcattactctt 7420819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37947203 - 37947149
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||||||||||    
T  37947203 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtc 37947149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6829768 - 6829679
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||| ||| ||||| ||||||||||| | |||| |||||| ||||||  ||| ||||| || ||| |||||||| ||||||    
T  6829768 ctttttctctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatca 6829679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 8577484 - 8577431
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| |||||| |||| | |||| ||||||||||||    
T  8577484 tttttctctctccattgtttttgaccaatgagaatagagaacaacaaggttgtc 8577431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21255768 - 21255703
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||  |||||||||||||| ||||    
T  21255768 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgt 21255703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 33660151 - 33660227
Alignment:
Q  19 ttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||| ||||||||||| | | || |||||||||||||| ||| ||||| | |||| |||||||||||||||||||||    
T  33660151 tttttgaccaataagaagataaaa-aacaaggttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 33660227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35030745 - 35030692
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||| ||||||||||||||| |||||||| |||| |||| |||||||||||    
T  35030745 ctttttcactctccattgtttttgaccaataaaaaaagagaacaacaaggttgt 35030692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41885809 - 41885874
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||| | |||| || |||||||||| |||| ||||    
T  41885809 ctttttctctctccattgtttttgaccaatcagaatagagaaaaagaaggttgtcaaaaaagttgt 41885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 42829290 - 42829194
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    |||||||||||| ||||||||||||||||||||| | |||| |  | ||||||||  |||||||| |  |||| | |||||| |||||||||||||||    
T  42829290 tttttctctctctattgttttttaccaataagaagagagaaaagaagggttgtcaccaaaattgt-tataaatggttgtacaaatatcactactcttc 42829194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 50797868 - 50797965
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||| ||||| |||||||| || | | || |||||| ||||||  ||| || || | || |||||||||| ||||||||||||||    
T  50797868 ctttttctctctccattatttttgaccaataaaaagagataaaaacaagtttgtcaccaaagttatcatcaattagatgtacaaatatcactactctt 50797965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1100306 - 1100370
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||| |||||| |||||| || |||||| |||| |||||||||||||||||||| |||| ||||    
T  1100306 tttttttctctcaattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 1100370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30530382 - 30530283
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttca 100  Q
    |||||||| |||||||||||||  ||||||||||| | |||| |  || |||||||| ||| |||||   |||| | |||||||||||||||||||||||    
T  30530382 ctttttctgtctccattgttttggaccaataagaagagagaaaatgaaagttgtcatcaaagttgtccc-aaatggttgtacatatatcactactcttca 30530284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3100530 - 3100625
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||  |||| ||||| || |||||||| | |||| |||||| ||||||||||| || |||| | ||| |||||||| |||||| ||||    
T  3100530 ctttttctctcctcattatttttgactaataagaagagagaaaaacaagattgtcataaaagttatcttaagatatatgtacatgtatcacaactc 3100625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 26839469 - 26839527
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaa 61  Q
    ||||||||||||||||||||||||| ||||| |||| |||| |  |||||||||||||||    
T  26839469 tttttctctctccattgttttttactaataa-aaaagagaaaacgaaggttgtcataaaa 26839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30547440 - 30547491
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    |||||||||||| ||||||||||| || ||||| |||||| |||||||||||    
T  30547440 ttttctctctccgttgttttttactaacaagaagaaagaaaaacaaggttgt 30547491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 38019484 - 38019429
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||||||||| ||||| |||||||| |||| |||| || |||||||||||    
T  38019484 tttttctctctccattatttttgaccaataacaaaagagaaaaagaaggttgtcat 38019429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50226863 - 50226832
Alignment:
Q  1 ctttttctctctccattgttttttaccaataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  50226863 ctttttctctctccattgttttttaccaataa 50226832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 16658528 - 16658582
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||| |||||||| |||| |||| |  ||||||||||    
T  16658528 tttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtca 16658582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22171499 - 22171409
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaag-aataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||||| |||||||||  |||||||||||| || || |||||||||||||| |||||| || || |||  ||||||| ||||||    
T  22171499 ctttttttctctctattgtttttgtccaataagaaaagagaaaaaacaaggttgtcattaaaattatcatggaatgaatgtacaaatatca 22171409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24158738 - 24158792
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||  ||||||||||||||||||||| | |||| ||||| ||||||    
T  24158738 ctttttctctctttattgttttttaccaataagaagacagaacaacaaagttgtc 24158792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 29877144 - 29877114
Alignment:
Q  2 tttttctctctccattgttttttaccaataa 32  Q
    |||||||||||||||||||||||||||||||    
T  29877144 tttttctctctccattgttttttaccaataa 29877114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11460882 - 11460947
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||| ||||| |||||||| || |||||  || |||||||||| |||| ||||    
T  11460882 ctttttctctctccattatttttgaccaataaaaagaaagagaaagaaggttgtcaaaaaagttgt 11460947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11897262 - 11897327
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||| ||||||||||||  || |||||||||||   |||||| ||||||||||| |||||||||    
T  11897262 ctttttttctctccattgtggttgaccaataagaagggagaatatcaaggttgtcacaaaaattgt 11897327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16987535 - 16987600
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| | || | |||| ||  ||||||||||| |||||||    
T  16987535 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgt 16987600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 19920852 - 19920905
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||| |||||||||| ||||||||||| | |||| ||||| |||||||    
T  19920852 ttttctctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtca 19920905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 26760651 - 26760704
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| |||||||| || | || | ||||||||||||    
T  26760651 tttttctctctccattgtttttgaccaataaaaagagagcacaacaaggttgtc 26760704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 31244717 - 31244664
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| |||||| |||| | |||| |||| |||||||    
T  31244717 tttttctctctccattgtttttgaccaatgagaagagagaacaacatggttgtc 31244664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32966355 - 32966420
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||||| || | |||| ||  ||||||||| |||| ||||    
T  32966355 ctttttctctctccattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgt 32966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 34941902 - 34941869
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaa 35  Q
    |||||||||||||||||||||| |||||||||||    
T  34941902 tttttctctctccattgtttttgaccaataagaa 34941869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 35972786 - 35972753
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaa 35  Q
    |||||||||||||||||||||||| |||||||||    
T  35972786 tttttctctctccattgttttttatcaataagaa 35972753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48962074 - 48962139
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||| ||||||||| ||||||||||| | |  | ||||||||||||  |||||||||    
T  48962074 ctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgt 48962139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 8934503 - 8934451
Alignment:
Q  15 attgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtc 67  Q
    ||||||||| ||||||||||||| |||| || || ||||||||| ||||||||    
T  8934503 attgtttttgaccaataagaaaagagaaaaagaaagttgtcatagaaattgtc 8934451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 17526509 - 17526573
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||| ||||| |||||||| || | |||| ||  || ||||||||||||||||    
T  17526509 tttttctctctccattatttttgaccaataaaaagagagaaaaatgagattgtcataaaaattgt 17526573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30196800 - 30196896
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||| |||||||| |||| |||||| | || | |||| || || |||||||| ||| |||| | |||| || |||||| |||||||||||||    
T  30196800 ctttttctccctccattgattttgaccaatcaaaatagagaaaaataaagttgtcatgaaagttgtttagaaagaggtgtacaaatatcactactct 30196896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 32939268 - 32939228
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    |||||||||||| ||||||||| ||||||||||| ||||||    
T  32939268 tttttctctctctattgtttttgaccaataagaagaaagaa 32939228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 40118697 - 40118633
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||| |||||| |||| |||||||| || |||| | ||||||||||||  |||||||||    
T  40118697 tttttctctccccattgattttaaccaataaaaagaaagcacaacaaggttgtcccaaaaattgt 40118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48325310 - 48325366
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||  ||||||||||    
T  48325310 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcat 48325366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 5925144 - 5925238
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||| ||||| ||||||||||| | |||| || ||||||||||||||| ||||| | |||| |||||||||||||||||||||    
T  5925144 tttttctctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtacatatatcactactc 5925238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 10344421 - 10344512
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||| ||||| ||||| |||||||| || |||||| |||||||||||||||||| ||||  | |||||||||||||||||||||||||||    
T  10344421 tctctccccattatttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatcactactct 10344512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 5924899 - 5924993
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||||||| ||||| ||||||||||| | |||| || ||||||||||| ||| ||||| | |||| |||||||||||||||||||||    
T  5924899 tttttctctctccattatttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 5924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30927914 - 30927825
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| |||||| |||||||| ||||||    
T  30927914 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatca 30927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2597143 - 2597045
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| | || |  ||||||| |||||||||||||||    
T  2597143 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatatcactactcttc 2597045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19723189 - 19723100
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| |||||||||||||  ||| ||||| ||| ||||||||||| ||||||    
T  19723189 ctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatagatgtacaaatatca 19723100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36497749 - 36497846
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||| ||||||||| |||||||| || | |||| ||||||||||| || ||| ||||| | || |||||||||| ||||||||||||||    
T  36497749 ctttttctctctctattgtttttaaccaataaaaagagagaaaaacaaggttgttatcaaagttgtcatcaattagatgtacaaatatcactactctt 36497846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37562124 - 37562031
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactac 94  Q
    |||||||| |||||||||||||| ||||||||||| | |||| |||||||||||||| ||| ||||| | || | |||||||| ||||||||||    
T  37562124 ctttttctttctccattgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatatcactac 37562031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 33817246 - 33817334
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| |||||||| || | |||| |||||| ||||||  ||||||||  ||||||||||||||| ||||||    
T  33817246 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatca 33817334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34765833 - 34765742
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcact 92  Q
    ||||||||||||||||||||||| |||||||| |||| |||| |  ||||||||||  ||||||||| | || |||||||||| ||||||||    
T  34765833 ctttttctctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgtcactaaaattgtcatcaattagatgtacaaatatcact 34765742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39259038 - 39258949
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| |||||| || |||| ||||||||| || ||| |||||||| ||||||    
T  39259038 ctttttctctctccattgtttttgactaataagaagagagaaaaacaagattatcattaaaattgtcatggaatggatgtacaaatatca 39258949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41273603 - 41273692
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| |  ||| ||||| || ||| |||||||| ||||||    
T  41273603 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatca 41273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7129621 - 7129716
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||| |||||||| ||||||||||| | |||| ||||| |||||||| ||| ||||  ||||||  ||||||| |||||||||||||    
T  7129621 ctttttctctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatgaatgtacaaatatcactactct 7129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1422685 - 1422631
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| | |||| |||||||||||||||||    
T  1422685 ctttttctctctccattgtttttgaccaatgaaaaaatagaataacaaggttgtc 1422631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28772393 - 28772447
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||||||||||||| ||||||||| || || ||||||    
T  28772393 ctttttctctctccattgttttttaccaataaaaaaaaagaaaaataaagttgtc 28772447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1065505 - 1065594
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||| ||||| | |||| ||||||||| |||  ||| ||||| || ||| |||||||| ||||||    
T  1065505 ctttttctctctccattgtttttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatggatgtacaaatatca 1065594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34641641 - 34641706
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||| ||||||||||||| || ||||||  ||| ||||||||||||| ||||||||||||||||    
T  34641641 ctttttttctctccattgttattgaccaatgggaagaaagaataacaagattgtcataaaaattgt 34641706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 37568590 - 37568497
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    |||||||| ||||||||| |||||||||||||||||| ||||| |||||||  ||| || |  |||||| |||||||| |||||| | ||||||    
T  37568590 tctctctctattgtttttgaccaataagaaaaaagaaaaacaatgttgtcactaaagttataatgaaatggatgtacaaatatcattgctcttc 37568497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 38844773 - 38844709
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| ||||||||||| | |||  ||  |||||||||||||||||||    
T  38844773 tttttctctctccattgtttttgaccaataagaagagagagaaaagaggttgtcataaaaattgt 38844709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5359426 - 5359520
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| |||||||| || | |||| ||  || |||||| |||| |||| || |||||||||| || ||||||||||||    
T  5359426 ctttttctctctccattgtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgt-ttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6825260 - 6825173
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatat 88  Q
    ||||||||||||||||||||||| ||||||||||| | |||| || ||||||| ||  ||| |||||   ||||||||||||| ||||    
T  6825260 ctttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaatat 6825173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8888340 - 8888395
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| ||||||||||||  |||| | |||||||||||    
T  8888340 ctttttctctctccattgtttttaaccaataagaaatgagaaaatcaaggttgtca 8888395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 28623103 - 28623009
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttga--aatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||| ||||||||||||| |||| | |||||||||||  ||| ||||| | |  | | |||||||| ||||||||||||||    
T  28623103 tctctctccattgtttttgaccaataagaaaagagaaaagcaaggttgtcaccaaagttgtcatcaatattggatgtacaaatatcactactctt 28623009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 32185648 - 32185593
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||||    
T  32185648 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcat 32185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 41293702 - 41293616
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||| ||||| || ||| |||||||| ||||||    
T  41293702 ttttctctctccattgtttttgaccaataagaagagagaaaaacaa-gttgtcactaaagttgtcatggaatggatgtacaaatatca 41293616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 6807004 - 6807098
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||| || ||| ||||||||||| ||||||||| | ||||  | ||||||||||| ||| || |||| ||||||||| |||||||| |||||||    
T  6807004 tttttttcactctattgttttttatcaataagaatatagaaataaaaggttgtcatcaaagttatcttcaaatagatgaacatatataactactc 6807098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14531710 - 14531796
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatat 88  Q
    |||||||||||||||||||||  | ||||||||| | |||| || ||||||||||| ||  ||||| ||| ||||||||||| ||||    
T  14531710 tttttctctctccattgttttagatcaataagaagagagaaaaataaggttgtcattaatgttgtcatgagatagatgtacaaatat 14531796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 35595299 - 35595353
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||| |||||||||||||||||||||||||| | |||| | |||||||||||    
T  35595299 tttttctttctccattgttttttaccaataagaagagagaaaagcaaggttgtca 35595353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 6656321 - 6656240
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtaca 83  Q
    ||||||||| |||||||||||| | ||||||||| | |||| |||||||||||||  |||||| || || ||| ||||||||    
T  6656321 tttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtaca 6656240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 6736723 - 6736642
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtaca 83  Q
    ||||||||| |||||||||||| | ||||||||| | |||| |||||||||||||  |||||| || || ||| ||||||||    
T  6736723 tttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtaca 6736642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 36593765 - 36593680
Alignment:
Q  5 ttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||  | |||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  36593765 ttctctctccattgtttttggctaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 36593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11138984 - 11139080
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||| |||| ||||| |||||||| || | |||| ||||| |||||||  ||| ||||| | || | |||||||| |||||||||||||    
T  11138984 ctttttctctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatatcactactct 11139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13884404 - 13884484
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgta 81  Q
    ||||||||||||||||||||||| | ||||||||| | |||| |||||  ||||||  ||| ||||| || ||||||||||    
T  13884404 ctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaagttgtcatgtaatagatgta 13884484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 14228786 - 14228870
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||| |||||||||| |||||||| |||| |||| || ||  ||||||  |||||| || |||||| |||||||||||||||    
T  14228786 tctctcttcattgtttttgaccaataaaaaaagagaaaaataaaattgtcactaaaattatcatgaaatggatgtacatatatca 14228870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14233627 - 14233567
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaa 61  Q
    ||||||||| |||||||||||||||||||| |||| | |||| ||||| ||||||| ||||    
T  14233627 ctttttctcgctccattgttttttaccaatgagaagagagaacaacaaagttgtcacaaaa 14233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14548808 - 14548752
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||||||||||||||||||||||| |||| | |||| ||  ||||||||||    
T  14548808 ctttttctctctccattgttttttaccaatgagaagagagaaaaatgaggttgtcat 14548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 42716409 - 42716449
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  42716409 tttttctctctccattgtttttgaccaataaaaaaaaagaa 42716449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 8233478 - 8233383
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||||||||| |||||| |||| | |||| ||||||||| ||  |||| ||||    |||||||||| || |||||| ||||||    
T  8233478 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaatatcattactct 8233383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 13565483 - 13565412
Alignment:
Q  19 ttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| |||||| | |||||||||||| ||| ||||  | |||| |||||||| ||||||    
T  13565483 ttttttaccaataagaataaagaaaagcaaggttgtcattaaagttgtgattaaattgatgtacaaatatca 13565412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20288621 - 20288676
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| ||||||||||| | |||  ||||| |||||||    
T  20288621 ctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtca 20288676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21075250 - 21075305
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| ||||||||||| | |||  ||||| |||||||    
T  21075250 ctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtca 21075305  T

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Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 32175043 - 32175082
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaaga 41  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  32175043 tttttctctctccattgtttttaaccaataaaaaaaaaga 32175082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40211730 - 40211683
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaa 48  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||    
T  40211730 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaa 40211683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40608601 - 40608696
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||| |||| |||| |||||| | || |||||| |||||  |||||||||||||| | | |||| |||| ||||  |||||||||||    
T  40608601 ctttttctctctctattgattttgaccaatcaaaataaagaaaaacaaaattgtcataaaaattatttagaaagagatatacaagtatcactactc 40608696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5742640 - 5742586
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||| ||||||    
T  5742640 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 5742586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 13267069 - 13267035
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaa 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  13267069 ctttttctctctccattgtttttgaccaataagaa 13267035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35967389 - 35967335
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||||| |||  |||| || |||||||||    
T  35967389 ctttttctctctccattgtttttgaccaataaaaaatgagaaaaataaggttgtc 35967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6849244 - 6849179
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||| ||| |||||||| |||||||| |||| |||| || || |||||||||||| ||||    
T  6849244 ctttttctctatccgttgtttttgaccaataaaaaaagagaaaaagaaagttgtcataaaagttgt 6849179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9431268 - 9431172
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||| |||| |||| |||||| | || | |||| |||||  |||||||||||||||| || ||| |  |||||| ||||||||||||||    
T  9431268 ctttttctctctctattgattttgaccaatcaaaatagagaaaaacaaaattgtcataaaaattgt-ttaaaaaatgtgtacaaatatcactactctt 9431172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9985661 - 9985620
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  9985661 ctttttctctctctattgtttttgaccaataagaaaagagaa 9985620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28473528 - 28473499
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  28473528 ctttttctctctccattgttttttaccaat 28473499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 33944854 - 33944943
Alignment:
Q  8 tctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||| | ||||||||| | |||| |  || || ||||||||||||||| | |||||| |||| | |||||| ||||||    
T  33944854 tctctccattgtttttgatcaataagaagacagaaaagaaatgtcgtcataaaaattgtcatcaaatagttgtataaatatcattactct 33944943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34838253 - 34838188
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||| ||||||||| ||||||||||| | |  | |||||||||||| ||||| ||||    
T  34838253 ctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgt 34838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37343462 - 37343561
Alignment:
Q  1 ctttttctctctccattgttttttacc---aataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||| |||||||||||||||| |||   |||||||||| |||| | |||||||||||  ||| || || | || | |||||||| |||||||||||||    
T  37343462 ctttttttctctccattgtttttgaccaataataagaaaagagaaaatcaaggttgtcaccaaagttatcatcaattggatgtacaaatatcactactct 37343561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43587729 - 43587818
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||| ||||||||||| | || | |||| ||||| |||||||  ||| ||||| | |||| ||| |||| ||||||    
T  43587729 ctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatatacaaatatca 43587818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 11223841 - 11223813
Alignment:
Q  2 tttttctctctccattgttttttaccaat 30  Q
    |||||||||||||||||||||||||||||    
T  11223841 tttttctctctccattgttttttaccaat 11223813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 38504259 - 38504347
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| |||||| | || | |||| |||||  ||||||  ||||||||  | |||| |||||||| ||||||    
T  38504259 tttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatggatgtacaaatatca 38504347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 50280070 - 50279981
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| |||||||||||||| ||| ||||| |||||| |||||||| ||||||    
T  50280070 ctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatca 50279981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31206850 - 31206754
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||| ||||| ||||||||||||| |||| |||| || |||||||| || ||| ||||| | |||| ||||||||||||||||||||||    
T  31206850 ctttttctctcttcattgatttttaccaataaaaaaagagaaaaataaggttgtaatcaaagttgtcataaaattgatgtacatatatcactactct 31206754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 54233484 - 54233389
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| | || | |||||||| ||||||||||||    
T  54233484 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 54233389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 35756069 - 35756155
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatat 88  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||| ||||| ||||||||||||||| ||||    
T  35756069 tttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaatat 35756155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13159749 - 13159838
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  13159749 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 13159838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 9582139 - 9582043
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttca 100  Q
    ||||||||| |||||||||| ||||||||||| |  ||| || ||||||||||| ||||||||| ||||||| ||||||| |||||| | |||||||    
T  9582139 tttctctcttcattgtttttaaccaataagaagagtgaaaaataaggttgtcatcaaaattgtcatgaaatatatgtacacatatcattgctcttca 9582043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 36819045 - 36819133
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  36819045 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 36819133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 23906969 - 23906874
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||||||||||||| ||||||||||| | |||| | |||||||||||  ||| ||||| | || | |||||||| |||||||||||||    
T  23906969 tttttctctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactct 23906874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28263633 - 28263731
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttc 99  Q
    ||||||||||||||||||||||| ||||||||||| |||||| || || |||||||  ||| ||||| |||||| |||| ||| |||||| | ||||||    
T  28263633 ctttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaatggatgaacaaatatcattgctcttc 28263731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2935494 - 2935429
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||| || |||||| |||| |||||||||||||||||||| |||| ||||    
T  2935494 ctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 2935429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3958001 - 3957912
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  3958001 ctttttctctctccattgtttttgacaaataagaagatagaaaaacaaggttgtcactaaagttgtcctggaatggatgtacaaatatca 3957912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11327196 - 11327285
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||| ||||||||| ||||||||||| | |||  |||||||||||||  ||| ||||| |||||| |||||||| ||||||    
T  11327196 ctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatca 11327285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20714331 - 20714420
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| || ||||||||||  |||||| || || ||| |||||||| ||||||    
T  20714331 ctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtcactaaaattatcatggaatggatgtacaaatatca 20714420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32931901 - 32931812
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||| |||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||  |||||| |||||||| ||||||    
T  32931901 ctttctctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatca 32931812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52454075 - 52453986
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||  ||||| |||||||  ||| ||||| |||||| |||||||| ||||||    
T  52454075 ctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatca 52453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30400139 - 30400052
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatat 88  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||  ||| ||||| || ||| |||||||| ||||    
T  30400139 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatat 30400052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49886751 - 49886838
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatat 88  Q
    ||||||||||||| ||||||||| |||||||| |||| ||||||| ||||||||| ||||| |||| |  |||||| |||||| ||||    
T  49886751 ctttttctctctctattgtttttaaccaataaaaaaagagaataataaggttgtcctaaaagttgtttaaaaatagttgtacaaatat 49886838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50652476 - 50652571
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||| ||||||||||||||||| ||||||||||| | |||| | |||  ||||||| ||||||||| | || || ||||||| ||||||||||||    
T  50652476 cttttactctctccattgtttttgaccaataagaagagagaaaagcaaaattgtcatcaaaattgtcatcaattaaatgtacaaatatcactactc 50652571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2482657 - 2482604
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  2482657 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaaggttgt 2482604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30633797 - 30633708
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||| ||||||| || ||||||||||| | |||| || ||||||||||| ||| || || | ||||||||||||| ||||||    
T  30633797 ctttttctctcttcattgttcttgaccaataagaagagagaaaaataaggttgtcattaaagttatcataaaatagatgtacaaatatca 30633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33971971 - 33972036
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||||||||||  |||||||||    
T  33971971 ctttttctctctccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgt 33972036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34021446 - 34021357
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||| ||||||||| ||||||||||| | |||| ||||| |||||||  ||| ||||| || ||| |||||||| ||||||    
T  34021446 ctttttctctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatca 34021357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41877776 - 41877865
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| |||||| | |||| |||| ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  41877776 ctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 41877865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42102325 - 42102390
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||  |||||||||| ||| ||||    
T  42102325 ctttttctctctccattgtttttgaccaataaaaaaaaagaaaaatgaggttgtcatgaaagttgt 42102390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43149326 - 43149273
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  43149326 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt 43149273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 44855339 - 44855428
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| || ||| ||||||  ||| ||||| |||||| |||||||| ||||||    
T  44855339 ctttttctctctccattttttttaaccaataagaagagagaaaaataagattgtcactaaagttgtcatgaaattgatgtacaaatatca 44855428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46344502 - 46344591
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||| |||||||| ||||| ||||||||||| |||||| || ||||||||||  ||| ||||| ||||||  ||||||| ||||||    
T  46344502 ctttttctttctccattatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatca 46344591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49361820 - 49361755
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||| || |||||| |||| |||||||||||| ||||||| |||| ||||    
T  49361820 ctttttctctctccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgt 49361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 50879683 - 50879772
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||| ||| ||||||||||| | |||| ||||| |||||||  ||| ||||| || ||| |||||||| ||||||    
T  50879683 ctttttctctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatca 50879772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 53102885 - 53102796
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||||||||||||||| | ||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  53102885 ctttttttctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 53102796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 9027702 - 9027754
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  9027702 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt 9027754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 27937053 - 27937149
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||| |||||||||| |||||||| || | | || | |||||||||||| ||| ||||| | || |||||||||| |||||| |||||||    
T  27937053 tttttctctcttcattgtttttgaccaataaaaagataaaaaagcaaggttgtcatcaaagttgtcatcaattagatgtacaaatatcattactctt 27937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 43441759 - 43441855
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||| ||||| |||||||| |||| |||| |  ||||||||| | ||| ||||| | || | |||||||| ||||||||||||||    
T  43441759 tttttctctctccattatttttgaccaataaaaaaagagaaaagtaaggttgtcgtcaaagttgtcatcaattggatgtacaaatatcactactctt 43441855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7197 - 7142
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| |||||||| |||| |||| || ||||||||||    
T  7197 ctttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaggttgtca 7142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 35074112 - 35074041
Alignment:
Q  27 caataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||| |||| || ||||||||||| ||| ||| | | ||||||||||| ||||||||||||||||    
T  35074112 caataagaaaagagaaaaataaggttgtcatcaaagttgccataaaatagatgtatatatatcactactctt 35074041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42755743 - 42755806
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaatt 64  Q
    ||||||||||||||||||||||| || ||||| || |||||| ||  |||||||||||||||||    
T  42755743 ctttttctctctccattgtttttgacaaataaaaagaaagaaaaaggaggttgtcataaaaatt 42755806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 53932374 - 53932279
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||||| |||||||||| || |||||||| | |||| | |||||||||||  ||| ||||| | || | |||||||| ||||||||||||    
T  53932374 ctttttctctcttcattgtttttgactaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 53932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8254115 - 8254204
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||||  || ||||||| | |||  || || |||||||  ||||||||| |||||| |||||||| ||||||    
T  8254115 ctttttctctctccattgtttttagccgataagaagagagagaaataatgttgtcactaaaattgtcatgaaatggatgtacaaatatca 8254204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 27276822 - 27276887
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| | |||||| |||| | || ||||||||||||  |||||||||    
T  27276822 ctttttctctctccattgtttttaatcaataaaaaaagaaaacaacaaggttgtctcaaaaattgt 27276887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 51717530 - 51717623
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    ||||| |||||||||| ||||||||||| ||||| | |||| | |||||||||||  ||| ||||| | || | |||||||| |||||||||||    
T  51717530 tttttttctctccattattttttaccaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactact 51717623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 1031401 - 1031345
Alignment:
Q  10 tctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||| ||||||||||| |||||| || || |||||||||||| ||||    
T  1031401 tctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgt 1031345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 35987330 - 35987394
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||| |||||||||| ||||| |||||||| || | |||| || ||||||||||||||||||||    
T  35987330 tttttttctctccattatttttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgt 35987394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 44127174 - 44127110
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||| |||| | |||| ||  |||||||||||||| ||||    
T  44127174 tttttctctctccattgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgt 44127110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23163128 - 23163049
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgt 80  Q
    |||||||||||| |||| ||||| ||||||||||||| |||| |||||  ||||||  ||||||||| || ||| |||||    
T  23163128 ctttttctctcttcattctttttgaccaataagaaaagagaaaaacaaaattgtcactaaaattgtcatggaattgatgt 23163049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 2009743 - 2009797
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||| ||||| ||||||||||| | |||| | |||||||||||    
T  2009743 tttttctctctccattatttttgaccaataagaagagagaaaagcaaggttgtca 2009797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2280265 - 2280319
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||| ||||||    
T  2280265 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 2280319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34900728 - 34900794
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtc 67  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| |   ||||||||| |||| |||||    
T  34900728 ctttttctctctctattattttttaccaataagaagaaagaaaaggtaggttgtcacaaaacttgtc 34900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 43900861 - 43900915
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||| ||||| ||||||||||| | |||| ||||| |||||||    
T  43900861 tttttctctctccattatttttaaccaataagaagagagaaaaacaaagttgtca 43900915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 51921501 - 51921535
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaa 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  51921501 ctttttctctctccattgtttttgaccaataagaa 51921535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27198137 - 27198072
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| | || | |||| ||  |||||||||||||| ||||    
T  27198137 ctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgt 27198072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 28884569 - 28884602
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaa 35  Q
    |||||||||||||||||||||| |||||||||||    
T  28884569 tttttctctctccattgtttttgaccaataagaa 28884602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37303057 - 37303028
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  37303057 ctttttctctctccattgttttttaccaat 37303028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40478270 - 40478181
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||| |||||||||| |||||| | || | || | ||||| |||||||  ||||||||| | |||| |||||||| ||||||    
T  40478270 ctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 40478181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 41348975 - 41348882
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactact 95  Q
    ||||||||||| |||||||||| | |||||| |||| |||| || ||||||||||  ||||||||  | || ||||||| || |||||| ||||    
T  41348975 tttttctctctgcattgtttttgatcaataaaaaaagagaaaaataaggttgtcaccaaaattgtgatcaattagatgtgcaaatatcattact 41348882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48205133 - 48205198
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||| ||||||| || | |||| |||| ||| |||||||||||||||| |||| ||||    
T  48205133 ctttttctctctacattgttattgatcaatgagaagaaaaaataacaaggttgtcacaaaagttgt 48205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 2812370 - 2812410
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    |||||||||||||||||||||  ||||||||||| ||||||    
T  2812370 tttttctctctccattgttttggaccaataagaagaaagaa 2812410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3069558 - 3069510
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaag 49  Q
    |||| |||||||||||||||||| ||||||||||| | |||| ||||||    
T  3069558 ctttatctctctccattgtttttgaccaataagaagagagaaaaacaag 3069510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 12762912 - 12762860
Alignment:
Q  15 attgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtc 67  Q
    |||||||||||||||||| || | |||| || || ||||||||||||||||||    
T  12762912 attgttttttaccaataaaaagagagaaaaagaaagttgtcataaaaattgtc 12762860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 29846874 - 29846846
Alignment:
Q  1 ctttttctctctccattgttttttaccaa 29  Q
    |||||||||||||||||||||||||||||    
T  29846874 ctttttctctctccattgttttttaccaa 29846846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 30796596 - 30796556
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    |||||||||||||||| ||||| |||||||| |||||||||    
T  30796596 tttttctctctccattatttttgaccaataaaaaaaaagaa 30796556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 35376533 - 35376469
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||||| || | |||  ||  |||||||||||||| ||||    
T  35376533 tttttctctctccattgtttttgaccaataaaaagagagagaaatgaggttgtcataaaagttgt 35376469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 24762 - 24849
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatc 89  Q
    |||||||||||||||||||||| ||||||||||| | |||| || ||||||||||  |||||| || ||||||||||||||| |||||    
T  24762 tttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatc 24849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1479 - 1390
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||||||||| || ||| |||||||| ||||||    
T  1479 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatca 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 147239 - 147150
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  147239 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 440807 - 440835
Alignment:
Q  2 tttttctctctccattgttttttaccaat 30  Q
    |||||||||||||||||||||||||||||    
T  440807 tttttctctctccattgttttttaccaat 440835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15622132 - 15622221
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  15622132 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 15622221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30574360 - 30574271
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||  ||||||||| || ||| |||||||| ||||||    
T  30574360 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatca 30574271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33823677 - 33823588
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  33823677 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 33823588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 17489437 - 17489533
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||  ||| ||||| | || | |||||||| ||||||||||||||    
T  17489437 tttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactctt 17489533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 22920474 - 22920386
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||||  | | ||||| || |||||||||||| ||||||    
T  22920474 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactatagttgtcatgtaatagatgtacaaatatca 22920386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14914458 - 14914556
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactcttca 100  Q
    ||||||||||||||||||||||| ||||||||||| | | || ||||| |||||||| ||| || |  |||||| |||||||| ||||||||||||||||    
T  14914458 ctttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtcatcaaagttat-atgaaatggatgtacaaatatcactactcttca 14914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3263491 - 3263402
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  3263491 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 3263402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8959248 - 8959345
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    ||||||||||||||||||||||| |||||||| || | |||| ||||||||||||   ||| ||||| | || | |||||||| ||||||||||||||    
T  8959248 ctttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatcactactctt 8959345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9957184 - 9957119
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||| || |||||| |||| ||||||||| |||||||||| |||||||||    
T  9957184 ctttttctctctccattgttattgaccaattagaagaaagaataataaggttgtcacaaaaattgt 9957119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12512881 - 12512970
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||  ||| ||||| || ||| |||||||| ||||||    
T  12512881 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatca 12512970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19271947 - 19272036
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||| |||  ||||||||| |  |||||||||||| ||||||    
T  19271947 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcactaaaattgtcatataatagatgtacaaatatca 19272036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38010960 - 38011049
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | | || |||||  ||||||  ||||||||| || |||||||||||| ||||||    
T  38010960 ctttttctctctccattgtttttgaccaataagaagagaaaaaaacaaaattgtcactaaaattgtcatggaatagatgtacaaatatca 38011049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 12417715 - 12417803
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| ||||| ||||| | ||||  |||| |||||||  ||| ||||| ||||||||||||||| ||||||    
T  12417715 tttttctctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgtcgtgaaatagatgtacaaatatca 12417803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 32634797 - 32634885
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||  || |||  ||||||||| || ||| |||||||| ||||||    
T  32634797 tttttctctctccaatgttttttaccaataagaaaagagaaaaacaaaattatcactaaaattgtcatggaatggatgtacaaatatca 32634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4173107 - 4173052
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||||||    
T  4173107 ctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtca 4173052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9594566 - 9594655
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||  || ||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  9594566 ctttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatggaatggatgtacaaatatca 9594655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9596797 - 9596708
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||  ||| ||||| || |||  ||||||| ||||||    
T  9596797 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatca 9596708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 12401281 - 12401362
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtaca 83  Q
    ||||||| |||||||||||||| ||||||||||| | |||| || ||||||||||  ||| ||||| |||||| ||||||||    
T  12401281 tttttctgtctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtaca 12401362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 28501707 - 28501760
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||| ||||||||||| | |||| |||||||||||||    
T  28501707 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 28501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2051014 - 2051070
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||||    
T  2051014 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaatgttgtcat 2051070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 5698310 - 5698246
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||||| |||| |||| || ||||||||||| ||| ||||    
T  5698310 tttttctctctccattgtttttgaccaataacaaaagagaaaaagaaggttgtcatgaaagttgt 5698246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 11464105 - 11464017
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| |||||||| || | |||| |||||||||||||  ||| ||||  || ||| |||||||| ||||||    
T  11464105 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatca 11464017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 26626801 - 26626737
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||||| |||| |||| || ||||||||||| ||| ||||    
T  26626801 tttttctctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgt 26626737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 4292872 - 4292967
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||| |||||||| ||||||||||| | |||| ||||| |||||||  ||||||||| | ||||  |||| || |||||| ||||||    
T  4292872 tttttctctctccgttgtttttgaccaataagaatagagaaaaacaaagttgtcaacaaaattgtcatcaaatgaatgtccaaatatcattactct 4292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4954554 - 4954609
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| ||| ||||||| | |||| |||||||||||||    
T  4954554 ctttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtca 4954609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10522863 - 10522918
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| |||||||||||||    
T  10522863 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtca 10522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8955641 - 8955587
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||| || ||||||||| |||||||| ||||||||| ||||||||||||    
T  8955641 ctttttctctttctattgtttttaaccaataacaaaaaagaacaacaaggttgtc 8955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26627418 - 26627483
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||| ||| |||| |||| || ||||||||||| ||| ||||    
T  26627418 ctttttctctctccattgtttttgaccattaataaaagagaaaaagaaggttgtcatgaaagttgt 26627483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36548363 - 36548274
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||  | |||||| || | |||| |||||||||||||| ||| ||||| | | || |||||||| ||||||    
T  36548363 ctttttctctctccattgttttcaatcaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatggatgtacaaatatca 36548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 372703 - 372607
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    |||||||||||| |||||||||| || ||||| || | |||| | |||||||||||  |||||| || | || | |||||||| |||||||||||||    
T  372703 ctttttctctcttcattgtttttgactaataaaaagatagaaaagcaaggttgtcaccaaaattatcatcaattggatgtacaaatatcactactct 372607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27005460 - 27005404
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    ||||||||||||||||||||||| | ||||||||| | |||| ||||||||| ||||    
T  27005460 ctttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttatcat 27005404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 40201102 - 40201038
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||| |||||| ||||||| || |||||| |||| |||||||||||||||||||| |||| ||||    
T  40201102 ttttcctctcttcattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 40201038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 34400706 - 34400745
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaaga 41  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  34400706 tttttctctctccattgtttttgaccaataaaaaaaaaga 34400745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 35616781 - 35616730
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||| ||||||||| ||||||||||| | |||| ||||||||||||    
T  35616781 tttctctctctattgtttttgaccaataagaagagagaacaacaaggttgtc 35616730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 41210495 - 41210432
Alignment:
Q  3 ttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||| ||||||||| ||||||||||| | |||| ||  |||||||||||||| ||||    
T  41210495 ttttctctctctattgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgt 41210432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10469930 - 10469876
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||| ||||||    
T  10469930 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 10469876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12613000 - 12612946
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||| |||||||||||||||| |||||| |||| | |||| ||||||||||||    
T  12613000 ctttttatctctccattgtttttgaccaatgagaagagagaacaacaaggttgtc 12612946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17574207 - 17574153
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||| |||||||||||| |||| | |||| |||||| ||||||||||||    
T  17574207 ctttttctctatccattgtttttgaccagtgagaagaaagaacaacaaggttgtc 17574153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 28904081 - 28904135
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||| |||||||| |||| |||| |  ||||||||||    
T  28904081 tttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtca 28904135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 28940476 - 28940530
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    |||||||||||||||||||||| |||||||| |||| |||| |  ||||||||||    
T  28940476 tttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtca 28940530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 35098714 - 35098652
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaatt 64  Q
    |||||||||||||||| ||||| | |||| | ||||||||| || || |||||||||||||||    
T  35098714 tttttctctctccattatttttgatcaattaaaaaaaagaaaaataaagttgtcataaaaatt 35098652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43153043 - 43152989
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||| |||||| |||| | |||| ||||| ||||||    
T  43153043 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 43152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 3518272 - 3518325
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| |||||| |||| | |||| ||||| ||||||    
T  3518272 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 3518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7077322 - 7077233
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| ||||| |||||| | || | |||| ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  7077322 ctttttctctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 7077233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20985512 - 20985447
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||| || || |||||| |||| ||| ||||||||| || |||||||| ||||    
T  20985512 ctttttctctctccattattattgaccaatgagaagaaaaaataacaagattatcataaaagttgt 20985447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25345426 - 25345515
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||  ||||||||| ||||||||||| | |||| || ||| ||||||  ||||||||  || ||| |||||||| ||||||    
T  25345426 ctttttctctctttattgtttttgaccaataagaagagagaaaaataagattgtcactaaaattgttatggaatggatgtacaaatatca 25345515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 30776707 - 30776796
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||||||||| |||||||||||||| || | |||  |||||  ||||||  ||| ||||| ||||||| ||||||| ||||||    
T  30776707 ctttttttctctccattattttttaccaataaaaagagagagaaacaaatttgtcactaaatttgtcatgaaataaatgtacaaatatca 30776796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 3154625 - 3154529
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||| ||||| || ||||| || | |||| || || |||||||  ||||||||| | || || ||||||| |||||| |||||||    
T  3154625 tttttctctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaatatcattactctt 3154529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11880970 - 11880914
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcat 57  Q
    |||||||||| |||||||||||| |||||| |||| | |||| || |||||||||||    
T  11880970 ctttttctctttccattgtttttgaccaatgagaagagagaaaaagaaggttgtcat 11880914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 35595968 - 35595904
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    |||||||||||||||||||||| |||||| | |||| || | |||||| |||||  |||||||||    
T  35595968 tttttctctctccattgtttttgaccaatgaaaaaagagcacaacaagattgtcccaaaaattgt 35595904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 39032584 - 39032492
Alignment:
Q  4 tttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||| ||||||||| ||||||||||| | |  | ||||||||||||  ||||||||| |  ||| || ||| || ||||||||||||    
T  39032584 tttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactc 39032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 1803962 - 1804054
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||| ||||||||||| | |||| |||||||||||||  ||| ||||| | || | |||||||| ||||||||||||||    
T  1803962 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctt 1804054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6435124 - 6435219
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    |||||||||| |||||||||||| ||||||||||| | |||| |||||||||||||  ||||||||| | || | |||||||| ||| ||||||||    
T  6435124 ctttttctctatccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaataccactactc 6435219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12441615 - 12441710
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactc 96  Q
    ||||||||||||||||||||||| ||| ||||||| | |||| | |||||||||||  ||| ||||| | || |||||||||| ||||||||||||    
T  12441615 ctttttctctctccattgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattagatgtacaaatatcactactc 12441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11017470 - 11017566
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||||||||||||| ||||||||||| | |||  |||||||||||||  ||| ||||  || ||| |||||||| |||||||| ||||    
T  11017470 ctttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcactgctct 11017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33491826 - 33491922
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||| || |||||| ||||||||||| | |||  || |||||||| || ||| ||||||| |||| |||||||||||||||| |||||    
T  33491826 ctttttctctctctatagtttttgaccaataagaagagagagaaataaggttgtaatcaaagttgtcttcaaatggatgtacatatatcaccactct 33491922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17835700 - 17835766
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtc 67  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||||| ||| |||||    
T  17835700 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtc 17835766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 237381 - 237292
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| ||||| | ||||| |||| ||||| | |||||||||| || ||||||    
T  237381 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgtcattaaatagatgtccaaatatca 237292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3339482 - 3339393
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||| ||||||||| |||||||| || | |||| |||||| ||||||  ||| ||||| |||||| |||||||| ||||||    
T  3339482 ctttttctctctctattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatca 3339393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12044418 - 12044483
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||| ||||    
T  12044418 ctttttctctctccattgtttttgaccaatgagaaaagagaaaaaggaggttgtcataaaagttgt 12044483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 3660335 - 3660247
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||| |||||||||| |||||||| || | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  3660335 tttttctctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 3660247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 27334957 - 27335041
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||| ||| ||||| |||||||| || | |||| |||||||||||||| ||| ||||| |||||| |||||||| ||||||    
T  27334957 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatca 27335041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 27395697 - 27395781
Alignment:
Q  6 tctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||| ||| ||||| |||||||| || | |||| |||||||||||||| ||| ||||| |||||| |||||||| ||||||    
T  27395697 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatca 27395781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 29376698 - 29376610
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||| |||||||||||| | ||||||||||| | || | |||| ||||||||| |||||||||   ||||||||||||| ||||||    
T  29376698 tttttctttctccattgtttataaccaataagaagagagcaaaacatggttgtcatcaaaattgtcactaaatagatgtacaaatatca 29376610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21210344 - 21210399
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtca 56  Q
    ||||||||||||||||||||||| | ||||||||| | |||| |||||||||||||    
T  21210344 ctttttctctctccattgtttttaatcaataagaagagagaaaaacaaggttgtca 21210399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 608643 - 608590
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    |||||||||||||||||||||| |||||| |||| | |||| ||||||||||||    
T  608643 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtc 608590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1897774 - 1897870
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||| |||||||||| |||||| | || | |||| ||  ||||||||| |||| |||| || |||||||||| || ||||||||||||||    
T  1897774 ctttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcactactctt 1897870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15364747 - 15364836
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||||||||||| | || | || | ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  15364747 ctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 15364836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29467442 - 29467530
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||| |||| |||||||||||||||||| ||||||||| || | | ||||||| ||||||||  | || |||||||||| ||||||    
T  29467442 ctttttctatctc-attgttttttaccaataaaaaaaaagaaaaatatgattgtcatcaaaattgttattaagtagatgtacaaatatca 29467530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32644700 - 32644757
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcata 58  Q
    |||||||||||||||||||||||||||||| |||| | |||| ||  |||||||||||    
T  32644700 ctttttctctctccattgttttttaccaatgagaagagagaaaaatgaggttgtcata 32644757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 2056872 - 2056960
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||| |||||||||||| ||||||||||| | |||  |||||||||||||  ||| ||||| || |||  ||||||| ||||||    
T  2056872 tttttctctatccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaatgaatgtacaaatatca 2056960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 11635706 - 11635783
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgta 81  Q
    |||||||||||||||| ||||| |||||||  |||||| || ||||  |||||||| ||||||||||| |||| ||||||    
T  11635706 tttttctctctccattatttttgaccaata--aaaaaaaaaaaacagagttgtcatcaaaattgtcttcaaatggatgta 11635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 12151839 - 12151787
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgt 54  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||| |||||    
T  12151839 tttttctctctccattgtttttgaccaataagaagagagaacaacaaagttgt 12151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 17902674 - 17902586
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||| |||||||||||||||| ||||||||||| | |||| |||||  || |||  ||| ||||| || |||||||||||| ||||||    
T  17902674 tttttatctctccattgtttttgaccaataagaagagagaaaaacaatattatcactaaagttgtcatggaatagatgtacaaatatca 17902586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 2886703 - 2886732
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  2886703 ctttttctctctccattgttttttaccaat 2886732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12177654 - 12177719
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||| ||||| |||||||  |||| |||| || ||||||||||| ||| ||||    
T  12177654 ctttttctctctccattatttttgaccaataccaaaagagaaaaagaaggttgtcatgaaagttgt 12177719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15328577 - 15328666
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| |||||| | || | || | ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  15328577 ctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 15328666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 16533243 - 16533214
Alignment:
Q  1 ctttttctctctccattgttttttaccaat 30  Q
    ||||||||||||||||||||||||||||||    
T  16533243 ctttttctctctccattgttttttaccaat 16533214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 19713083 - 19713136
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtc 55  Q
    ||||||||||||||||||||||||||||| | || | || | ||||||||||||    
T  19713083 tttttctctctccattgttttttaccaatgaaaagagagcacaacaaggttgtc 19713136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 2582751 - 2582846
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactctt 98  Q
    |||||||||||||||||||||| | |||| | || | |||| ||  ||||||||| |||| |||| || |||||||||| || ||||||| ||||||    
T  2582751 tttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaccactctt 2582846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14094999 - 14095095
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcactactct 97  Q
    ||||||||||||| |||| |||| | |||| | || | |||| ||||| ||||||||  || |||| | |||| ||||||||| |||||||||||||    
T  14094999 ctttttctctctctattgattttgatcaatcaaaatagagaaaaacaaagttgtcatggaagttgtttagaaagagatgtacaaatatcactactct 14095095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24437532 - 24437568
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaa 37  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  24437532 ctttttctctctccattgtttttaaccaataaaaaaa 24437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 249124 - 249036
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| | ||||||||| | |||| |||||||||||||  ||| ||||| || ||| |||||||| ||||||    
T  249124 tttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatca 249036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31283 - 31194
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||| |||||||||| ||||| ||||||||||| | |||| ||||| |||||||  |||||| || || |||||||||||| ||||||    
T  31283 ctttttatctctccattatttttgaccaataagaacagagaaaaacaaagttgtcactaaaattatcatgtaatagatgtacaaatatca 31194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 88896 - 88985
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| ||||||||||||| | || || ||||||||||  ||| || || ||| || |||||||| ||||||    
T  88896 ctttttctctctccattgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaatatca 88985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 337206 - 337247
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    ||||||||||||||||||||||| |||||||| |||| ||||    
T  337206 ctttttctctctccattgtttttgaccaataaaaaaagagaa 337247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9518 - 9607
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||||||||||| | || | || | ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  9518 ctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 9607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 17064 - 17152
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||||||||||||||||| |||||| |||| | |||  ||||| |||||||  ||| ||||| | |||| |||||||| ||||||    
T  17064 tttttctctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 17152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3448 - 3538
Alignment:
Q  1 ctttttctctctccattgtttttt-accaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    |||||||| ||||||||  ||||| ||||||||||| |||||| || ||||||||||  ||| ||||| ||||||  ||||||| ||||||    
T  3448 ctttttctttctccatttatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatca 3538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 17312 - 17222
Alignment:
Q  2 tttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatcact 92  Q
    ||||||| |||||||||||||| |||||||| |||| |||| || |||||| ||||| || |||||   |||||| ||| || ||||||||    
T  17312 tttttctatctccattgtttttgaccaataaaaaaagagaaaaagaaggttatcatataagttgtcgctaaatagttgttcaaatatcact 17222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31583 - 31518
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||||||||||||| |||||| | || | |||| || || ||||||| |||||||||    
T  31583 ctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48742 - 48807
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgt 66  Q
    ||||||||||||| ||||||||| ||||||||||| | |  | ||||||||||||  |||||||||    
T  48742 ctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgt 48807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 124245 - 124286
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaa 42  Q
    ||||||||||||||||||||||| |||||||| |||| ||||    
T  124245 ctttttctctctccattgtttttgaccaataaaaaaagagaa 124286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18683 - 18771
Alignment:
Q  1 ctttttctctctccattgttttttaccaataagaaaaaagaataacaaggttgtcataaaaattgtcttgaaatagatgtacatatatca 90  Q
    ||||||||||||||||||||||| || |||||||| | |||| || |||||| |||  ||| ||||| || ||| |||||||| ||||||    
T  18683 ctttttctctctccattgtttttgactaataagaatagagaaaaataaggttatcactaaagttgtc-tggaatggatgtacaaatatca 18771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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