View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14006_high_17 (Length: 249)
Name: NF14006_high_17
Description: NF14006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14006_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 31777095 - 31777324
Alignment:
| Q |
4 |
gcacattgtagtatttgtttggtttaacgtctaagaggaaattagctaaaaagagtgtcttctctccaaacgtgagtttactacgctgtaccaaagaaac |
103 |
Q |
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| T |
31777095 |
gcacattgtagtatttgtttggtttaacgtctaagaggaaattagctaaaaagagtatcttctcaccaaacgtgagtttactacgctgtaccaaagaaac |
31777194 |
T |
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| Q |
104 |
aaacatatgtgtaatatactattgctttcttttcatattttaagttaaaaagagtggctttcactccaaacttctacaggttcccgcaagaacccaagga |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31777195 |
aaacatatgtgtaatatactattgctttcttttcatattttaagttaaaaagagtggctttccctccaaacttctacaggttcccgcaagaacccaagga |
31777294 |
T |
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| Q |
204 |
atctaccggttcggcgacacgtgaagaagt |
233 |
Q |
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|||||| ||||||||||||||||||||||| |
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| T |
31777295 |
atctacaggttcggcgacacgtgaagaagt |
31777324 |
T |
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