View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14006_low_18 (Length: 263)
Name: NF14006_low_18
Description: NF14006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14006_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 3 - 251
Target Start/End: Complemental strand, 31777093 - 31776845
Alignment:
| Q |
3 |
taaagacataatattttgtgaaaagtgtagatggatcttactctttttaaaaatgtatttcaatgtttaaatcaaccataaagttcaagaaggatcaaaa |
102 |
Q |
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| T |
31777093 |
taaagacataatattttgtgaaaagtgtagatggatcttactctttttaaaaatgtatttcaatgtttaaatcaaccataaagttcaagaaggatcaaaa |
31776994 |
T |
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| Q |
103 |
ggacaataatattataaaacattagttcaataattttcaatagttaatgagacttaacaacaagaacaaaaatcaagttttttcccattaagtgggtcaa |
202 |
Q |
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| T |
31776993 |
ggactataatattagaacacattagttcaataattttcaatagttaatgagacttaacaacaagaacaaaaatcaagttttttcccattaagtgggtcaa |
31776894 |
T |
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| Q |
203 |
tcaggcttnnnnnnnngttttaatatatgtttcctaaaatttcaatatt |
251 |
Q |
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| T |
31776893 |
tcaggcttaaaaaaaagttttaatatatgtttcctaaaatttcaatatt |
31776845 |
T |
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