View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14006_low_21 (Length: 243)
Name: NF14006_low_21
Description: NF14006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14006_low_21 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 41300365 - 41300128
Alignment:
| Q |
6 |
tgaagatattatatttaatttaatttcaaagtgagaaatagaggcatgataaaaaacatattgaagcaatatattatctaagtgtaacttctcaatggaa |
105 |
Q |
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| T |
41300365 |
tgaagatattatatttaatttaatttcaaagtgagaaatagaggcatgataaaaaacatattgaagcaatatattatctaagtgtaacttctcaatggaa |
41300266 |
T |
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| Q |
106 |
gcaacatcatgtatatattaatataccaataccaatatactgagctagctagttaagatttaaaagtatcaatctgtctaatttaattcattaatttcac |
205 |
Q |
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| T |
41300265 |
gcaacatcatgtatatattaatataccaataccaatatactgagctagctagttaagatttaaaagtatcaatctgtctaatttaattcattaatttcac |
41300166 |
T |
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| Q |
206 |
tagtctcagttcccctattaatataaatggttatacca |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
41300165 |
tagtctcagttcccctattaatataaatggttatacca |
41300128 |
T |
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