View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14006_low_22 (Length: 240)
Name: NF14006_low_22
Description: NF14006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14006_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 32354568 - 32354357
Alignment:
| Q |
11 |
attattctcctaaaatgttctcacaatgactacctaat-agtattaaactaatttggttaatttacgnnnnnnnncttctgaatgtaatgtaacattaat |
109 |
Q |
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| T |
32354568 |
attaatctcctaaaatgttctcacaatgactacctaattagtattaaactaatttggttaatttacgttttttttcttctgaatgtaatgtaacattaat |
32354469 |
T |
|
| Q |
110 |
ttacatgcatcataaagttttacacgtaaatattatctttctcctaaaagaaagttttaagcgtaaatacaatgaaattcatataaatttcaatgatttt |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32354468 |
ttacatgcatcataaagttttacacgtaaatattatctttctccttaaagaaagttttaagcgtaaatacaatgaaattcatataaatttcaatgatttt |
32354369 |
T |
|
| Q |
210 |
aattaatatact |
221 |
Q |
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|||||||||||| |
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| T |
32354368 |
aattaatatact |
32354357 |
T |
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