View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14006_low_26 (Length: 234)
Name: NF14006_low_26
Description: NF14006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14006_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 8854144 - 8854360
Alignment:
| Q |
1 |
cataattctaggtcattaataaacattaagaaaggnnnnnnnnnncctccattacaatttctaacaacctatgaatcatacagcttcttgaagattctta |
100 |
Q |
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| T |
8854144 |
cataattctaggtcattaataaacattaagaaaggaaaaaaaaaac-tccattacaatttctaacaacctatgaatcatacagcttcttgaagattctta |
8854242 |
T |
|
| Q |
101 |
acaaactcaggtagctcagttgagtcaacttctgttggggcatctcctgttgccattaccataacatcacgagcaatctttcgatctgaaaaacataaaa |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8854243 |
acaaactcaggtagttcagttgagtcaacttctgttggtgcatctcctgttgccattaccataacatcacgagcaatctttcgatctgaaaaacataaaa |
8854342 |
T |
|
| Q |
201 |
cataaatattaactttct |
218 |
Q |
| |
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|||||||||||||||||| |
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| T |
8854343 |
cataaatattaactttct |
8854360 |
T |
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