View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14009_high_3 (Length: 652)

Name: NF14009_high_3
Description: NF14009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14009_high_3
NF14009_high_3
[»] chr7 (40 HSPs)
chr7 (55-341)||(6838803-6839083)
chr7 (333-609)||(6838475-6838762)
chr7 (558-609)||(28677314-28677365)
chr7 (559-609)||(11668013-11668063)
chr7 (556-609)||(36245371-36245424)
chr7 (566-609)||(2523775-2523818)
chr7 (559-609)||(13807338-13807388)
chr7 (557-609)||(41850696-41850748)
chr7 (572-609)||(2399963-2400000)
chr7 (560-609)||(13807241-13807290)
chr7 (560-609)||(45533330-45533379)
chr7 (557-609)||(4826861-4826913)
chr7 (553-605)||(45441428-45441480)
chr7 (554-605)||(9979794-9979845)
chr7 (554-609)||(10007676-10007731)
chr7 (570-609)||(39153296-39153335)
chr7 (559-609)||(2523870-2523920)
chr7 (559-609)||(33901138-33901188)
chr7 (561-609)||(2680858-2680906)
chr7 (497-533)||(8149911-8149947)
chr7 (557-601)||(10007570-10007614)
chr7 (561-609)||(10462377-10462425)
chr7 (546-609)||(3411432-3411495)
chr7 (562-609)||(28020002-28020049)
chr7 (558-609)||(32811375-32811426)
chr7 (559-609)||(23870977-23871027)
chr7 (559-609)||(27231832-27231882)
chr7 (575-609)||(28298954-28298988)
chr7 (559-609)||(44682564-44682614)
chr7 (559-609)||(45025694-45025744)
chr7 (560-605)||(9979904-9979949)
chr7 (556-609)||(12763329-12763382)
chr7 (560-609)||(24163369-24163418)
chr7 (556-609)||(24164616-24164669)
chr7 (560-609)||(36245476-36245525)
chr7 (565-609)||(1366599-1366643)
chr7 (553-585)||(1738440-1738472)
chr7 (569-601)||(29365629-29365661)
chr7 (565-609)||(47942841-47942885)
chr7 (565-609)||(47948271-47948315)
[»] chr1 (41 HSPs)
chr1 (496-609)||(26924313-26924426)
chr1 (496-609)||(26760108-26760221)
chr1 (558-609)||(26070924-26070975)
chr1 (559-609)||(38040274-38040324)
chr1 (560-609)||(52427346-52427395)
chr1 (557-609)||(34332576-34332628)
chr1 (551-609)||(2351123-2351181)
chr1 (560-610)||(27819310-27819360)
chr1 (559-609)||(34662781-34662831)
chr1 (560-605)||(519832-519877)
chr1 (565-609)||(44939070-44939114)
chr1 (562-609)||(8971328-8971375)
chr1 (555-605)||(37179014-37179064)
chr1 (575-609)||(38737945-38737979)
chr1 (560-609)||(18744655-18744704)
chr1 (560-609)||(26070823-26070872)
chr1 (560-609)||(29892230-29892279)
chr1 (560-609)||(38040376-38040425)
chr1 (560-609)||(39748618-39748667)
chr1 (560-609)||(43929345-43929394)
chr1 (560-609)||(47678255-47678304)
chr1 (557-609)||(26924209-26924261)
chr1 (565-609)||(49944933-49944977)
chr1 (558-609)||(18038788-18038839)
chr1 (574-609)||(34146818-34146853)
chr1 (558-609)||(50155398-50155449)
chr1 (559-601)||(5891724-5891766)
chr1 (559-609)||(11386255-11386304)
chr1 (575-609)||(15286023-15286057)
chr1 (556-609)||(15699459-15699512)
chr1 (495-532)||(17724835-17724872)
chr1 (555-600)||(26550396-26550441)
chr1 (560-609)||(29256698-29256747)
chr1 (565-610)||(38590070-38590115)
chr1 (560-609)||(47844633-47844682)
chr1 (568-605)||(47912824-47912861)
chr1 (557-609)||(6793694-6793746)
chr1 (561-609)||(7375182-7375230)
chr1 (557-609)||(13321814-13321866)
chr1 (557-609)||(26760273-26760325)
chr1 (557-609)||(37515190-37515242)
[»] chr4 (44 HSPs)
chr4 (553-609)||(30191996-30192052)
chr4 (559-605)||(44111743-44111789)
chr4 (560-609)||(32714268-32714317)
chr4 (560-609)||(48361152-48361201)
chr4 (557-609)||(8347745-8347797)
chr4 (557-609)||(48195990-48196042)
chr4 (557-609)||(48361048-48361100)
chr4 (558-609)||(36132632-36132683)
chr4 (558-609)||(47943827-47943878)
chr4 (567-609)||(3162995-3163037)
chr4 (560-609)||(44111845-44111894)
chr4 (557-609)||(40780246-40780298)
chr4 (558-609)||(50121537-50121588)
chr4 (559-609)||(53225744-53225794)
chr4 (560-609)||(4386236-4386285)
chr4 (556-609)||(29686395-29686448)
chr4 (560-609)||(47866135-47866184)
chr4 (560-605)||(50121436-50121481)
chr4 (562-609)||(19150823-19150870)
chr4 (550-609)||(42804355-42804414)
chr4 (559-609)||(3162893-3162943)
chr4 (559-609)||(17284733-17284783)
chr4 (559-609)||(20745330-20745380)
chr4 (559-609)||(25477543-25477593)
chr4 (559-609)||(37991484-37991534)
chr4 (575-609)||(41328722-41328756)
chr4 (575-609)||(42670864-42670898)
chr4 (563-609)||(43020855-43020901)
chr4 (567-609)||(44061394-44061436)
chr4 (557-607)||(55190663-55190713)
chr4 (560-609)||(8347644-8347693)
chr4 (560-609)||(9044386-9044435)
chr4 (560-609)||(32193474-32193523)
chr4 (553-610)||(36196357-36196414)
chr4 (560-609)||(42160073-42160122)
chr4 (560-605)||(45096678-45096723)
chr4 (496-533)||(47386110-47386147)
chr4 (564-609)||(53658367-53658412)
chr4 (496-533)||(54217293-54217330)
chr4 (557-609)||(4758773-4758825)
chr4 (557-609)||(20459237-20459289)
chr4 (565-609)||(41116566-41116610)
chr4 (566-606)||(46434104-46434144)
chr4 (497-533)||(55360469-55360505)
[»] chr6 (22 HSPs)
chr6 (554-609)||(9077686-9077741)
chr6 (554-609)||(30895284-30895339)
chr6 (557-609)||(25538048-25538100)
chr6 (558-609)||(17265718-17265769)
chr6 (559-609)||(3064983-3065033)
chr6 (560-609)||(33119903-33119952)
chr6 (559-609)||(2230449-2230499)
chr6 (560-609)||(2943342-2943391)
chr6 (560-609)||(8052956-8053005)
chr6 (560-609)||(27909075-27909124)
chr6 (558-605)||(2972161-2972208)
chr6 (562-609)||(28630754-28630801)
chr6 (558-609)||(29168474-29168525)
chr6 (559-609)||(2913331-2913381)
chr6 (575-609)||(30627923-30627957)
chr6 (556-609)||(2810178-2810231)
chr6 (556-609)||(7405544-7405597)
chr6 (560-609)||(23916227-23916276)
chr6 (557-609)||(12999751-12999803)
chr6 (560-600)||(17700147-17700187)
chr6 (560-600)||(30627822-30627862)
chr6 (557-609)||(31971026-31971078)
[»] chr3 (28 HSPs)
chr3 (558-609)||(8266331-8266382)
chr3 (560-609)||(21662986-21663035)
chr3 (556-609)||(53441902-53441955)
chr3 (559-609)||(51517057-51517107)
chr3 (555-609)||(21662880-21662934)
chr3 (560-609)||(12064908-12064957)
chr3 (553-609)||(26999121-26999177)
chr3 (556-606)||(28406462-28406512)
chr3 (575-609)||(43343546-43343580)
chr3 (560-601)||(13622486-13622527)
chr3 (569-609)||(19649587-19649627)
chr3 (569-601)||(23222966-23222998)
chr3 (557-605)||(45010746-45010794)
chr3 (558-609)||(31376172-31376223)
chr3 (558-609)||(50354336-50354387)
chr3 (575-609)||(9197095-9197129)
chr3 (551-609)||(18765358-18765416)
chr3 (559-609)||(28406567-28406617)
chr3 (551-609)||(40460335-40460393)
chr3 (558-608)||(53703727-53703777)
chr3 (580-609)||(23920702-23920731)
chr3 (556-609)||(40198390-40198443)
chr3 (560-609)||(42225662-42225711)
chr3 (560-605)||(51516957-51517002)
chr3 (560-609)||(53442007-53442056)
chr3 (560-609)||(54537543-54537592)
chr3 (569-609)||(9236187-9236227)
chr3 (561-609)||(19649679-19649727)
[»] chr5 (33 HSPs)
chr5 (560-609)||(10228167-10228216)
chr5 (557-609)||(13789728-13789780)
chr5 (559-609)||(33478207-33478257)
chr5 (563-605)||(5002142-5002184)
chr5 (559-609)||(29031035-29031085)
chr5 (557-603)||(29299464-29299510)
chr5 (560-609)||(18473575-18473624)
chr5 (560-609)||(34297173-34297222)
chr5 (558-605)||(22102012-22102059)
chr5 (559-609)||(29299355-29299405)
chr5 (559-609)||(38394528-38394578)
chr5 (560-609)||(1015155-1015204)
chr5 (556-609)||(1643444-1643497)
chr5 (560-609)||(22731258-22731307)
chr5 (495-532)||(36446798-36446835)
chr5 (495-532)||(36469219-36469256)
chr5 (557-609)||(19295953-19296005)
chr5 (559-606)||(3814074-3814121)
chr5 (558-609)||(21488280-21488331)
chr5 (567-601)||(13664952-13664986)
chr5 (559-609)||(15968410-15968460)
chr5 (559-609)||(27488446-27488496)
chr5 (560-609)||(919641-919690)
chr5 (556-609)||(7945832-7945885)
chr5 (560-609)||(8680641-8680690)
chr5 (560-609)||(29031136-29031185)
chr5 (560-609)||(30132888-30132937)
chr5 (560-609)||(38394427-38394476)
chr5 (559-599)||(73894-73934)
chr5 (557-609)||(1015255-1015307)
chr5 (557-601)||(5355659-5355703)
chr5 (553-605)||(26327639-26327691)
chr5 (496-532)||(39061075-39061111)
[»] chr2 (47 HSPs)
chr2 (560-609)||(30761478-30761527)
chr2 (560-609)||(12962805-12962854)
chr2 (558-609)||(9152376-9152427)
chr2 (559-609)||(9152479-9152529)
chr2 (559-609)||(29988992-29989042)
chr2 (559-609)||(43713972-43714022)
chr2 (560-609)||(38982998-38983047)
chr2 (557-609)||(4063371-4063423)
chr2 (575-609)||(2936393-2936427)
chr2 (559-609)||(30761376-30761426)
chr2 (559-609)||(45571129-45571179)
chr2 (559-609)||(45574796-45574846)
chr2 (559-609)||(45578463-45578513)
chr2 (559-609)||(45582130-45582180)
chr2 (559-609)||(45585797-45585847)
chr2 (559-609)||(45589464-45589514)
chr2 (559-609)||(45593131-45593181)
chr2 (559-609)||(45596798-45596848)
chr2 (559-609)||(45600465-45600515)
chr2 (559-609)||(45604132-45604182)
chr2 (559-609)||(45607799-45607849)
chr2 (559-609)||(45611466-45611516)
chr2 (559-609)||(45615133-45615183)
chr2 (560-609)||(7943438-7943487)
chr2 (560-609)||(11030191-11030240)
chr2 (552-609)||(11182156-11182213)
chr2 (559-608)||(11794550-11794599)
chr2 (560-609)||(45034497-45034546)
chr2 (557-609)||(36881627-36881679)
chr2 (572-607)||(5109465-5109500)
chr2 (566-609)||(28494804-28494847)
chr2 (570-609)||(32457222-32457261)
chr2 (558-609)||(33273967-33274018)
chr2 (570-609)||(38554467-38554506)
chr2 (578-609)||(41153128-41153159)
chr2 (559-609)||(41153211-41153261)
chr2 (560-601)||(20555365-20555406)
chr2 (560-609)||(28014373-28014422)
chr2 (560-609)||(30758719-30758768)
chr2 (560-609)||(36881532-36881581)
chr2 (560-609)||(42698164-42698213)
chr2 (560-605)||(43714077-43714122)
chr2 (557-609)||(5109359-5109411)
chr2 (565-609)||(10205026-10205070)
chr2 (557-609)||(13775811-13775863)
chr2 (549-585)||(41492885-41492921)
chr2 (557-609)||(44737279-44737331)
[»] chr8 (33 HSPs)
chr8 (558-609)||(16448786-16448837)
chr8 (557-609)||(8793819-8793871)
chr8 (558-609)||(42122963-42123014)
chr8 (560-609)||(3236430-3236479)
chr8 (552-609)||(12958875-12958932)
chr8 (557-609)||(5031564-5031616)
chr8 (557-609)||(7693029-7693081)
chr8 (567-607)||(40651323-40651363)
chr8 (554-609)||(6899519-6899574)
chr8 (558-609)||(13013967-13014018)
chr8 (574-609)||(32597511-32597546)
chr8 (559-609)||(22429634-22429684)
chr8 (559-605)||(35149666-35149712)
chr8 (559-609)||(44796441-44796491)
chr8 (556-609)||(7693133-7693186)
chr8 (560-609)||(24618957-24619006)
chr8 (560-609)||(36366024-36366073)
chr8 (557-609)||(1223119-1223171)
chr8 (553-609)||(43332552-43332608)
chr8 (557-609)||(43932149-43932201)
chr8 (554-609)||(43932042-43932097)
chr8 (559-609)||(10839863-10839912)
chr8 (558-608)||(34745254-34745304)
chr8 (556-609)||(8803328-8803381)
chr8 (496-533)||(13085070-13085107)
chr8 (560-609)||(40483282-40483331)
chr8 (559-608)||(43292566-43292615)
chr8 (560-609)||(43332661-43332710)
chr8 (557-609)||(6899416-6899468)
chr8 (561-609)||(8453595-8453643)
chr8 (557-605)||(24822827-24822875)
chr8 (553-609)||(43135144-43135200)
chr8 (559-607)||(45372807-45372855)
[»] scaffold0136 (1 HSPs)
scaffold0136 (559-609)||(16629-16679)
[»] scaffold0001 (1 HSPs)
scaffold0001 (560-609)||(156767-156816)
[»] scaffold0767 (3 HSPs)
scaffold0767 (559-609)||(3807-3857)
scaffold0767 (565-605)||(5299-5339)
scaffold0767 (557-600)||(3719-3762)
[»] scaffold0110 (3 HSPs)
scaffold0110 (556-609)||(40291-40344)
scaffold0110 (557-609)||(1632-1684)
scaffold0110 (560-606)||(1532-1578)
[»] scaffold0778 (1 HSPs)
scaffold0778 (560-601)||(5271-5312)
[»] scaffold0015 (1 HSPs)
scaffold0015 (560-609)||(17384-17433)
[»] scaffold0057 (1 HSPs)
scaffold0057 (552-588)||(30984-31020)
[»] scaffold0024 (1 HSPs)
scaffold0024 (557-609)||(7224-7276)


Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 55 - 341
Target Start/End: Complemental strand, 6839083 - 6838803
Alignment:
Q  55 aattattattaaaaggaatactacatcattgtgtgtatgttaaaacaatatagatagatttgatattgtgatcatgtatgaacaacttgaacagatgatc 154  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||    ||||| |||||||||||||||||| ||||||||||||||||    
T  6839083 aattattattaaaaggaatactacatcattgtga--atgttaaaacaatatagat----ttgatcttgtgatcatgtatgaaccacttgaacagatgatc 6838990  T
Q  155 cgattcattcaaaatgagtaatttatgttagagttcaaagtaaacaacatcaattagtaattacgaaaattgagcatgatagtatttctattagtgttat 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||||||    
T  6838989 cgattcattcaaaatgagtaatttattttagagttcaaagtaaacaacatcaatcaataattatgaaaattgagtatgatagtatttctattagtgttat 6838890  T
Q  255 ctgaaccaaggtctcaaactaatatcactagaccaacctgcgtggattagaagtatgcataattaatgtctgattgtaatagcattt 341  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6838889 ctgaaccaaggtcttaaaccaatatcactagaccaacctacgtggattagaagtatgcataattaatgtctgattgtaatagtattt 6838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 333 - 609
Target Start/End: Complemental strand, 6838762 - 6838475
Alignment:
Q  333 atagcatttctattagtgttatctgaactttaaaatctactttaacgctaacgaatcatcagaacccaactcagnnnnnnnagaggagaacccaactcac 432  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  6838762 atagtatttttattagtgttatctgaactttgaaatctactttaacgctaacgaatcatcagaacccaactcagtttttttagaggagaacccaactcac 6838663  T
Q  433 gtaaattacttttataatatactctatccgtcccataataagtgggtcatttgc-----------nnnnnnnntaattgattcatttcgtttttcaatac 521  Q
     |||| ||||||||||||||||| |||||||||||||||||||| |||||||||                    ||||||||||||||||||||||||||    
T  6838662 ataaactacttttataatatactttatccgtcccataataagtgagtcatttgcaaaaaaacattacttaaaaaaattgattcatttcgtttttcaatac 6838563  T
Q  522 aatattaattacnnnnnnnnaattataattttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||        |||||||| || |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  6838562 aatattaattactttttcccaattataacttaaattaatactcattccgatcttatttataagaaacatttgacttttttgattcatt 6838475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 28677314 - 28677365
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28677314 aatactccctccggtcctatttataagaaacatttgacttttttgattcatt 28677365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 11668013 - 11668063
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11668013 atactccctccggtcctatttataagaaacatttgacttttttgattcatt 11668063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 36245371 - 36245424
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  36245371 ttaatactccctccggtcctgtttataagaaacatttgacttttttgattcatt 36245424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 609
Target Start/End: Original strand, 2523775 - 2523818
Alignment:
Q  566 ctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2523775 ctccggtcttatttataagaaacatttgacttttttgattcatt 2523818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 13807388 - 13807338
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  13807388 atactccctccggttctatttataagaaacatttgacttttttgattcatt 13807338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 41850748 - 41850696
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  41850748 taatactccatccggtcctatttataagaaacattttacttttttgattcatt 41850696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 572 - 609
Target Start/End: Original strand, 2399963 - 2400000
Alignment:
Q  572 tcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2399963 tcttatttataagaaacatttgacttttttgattcatt 2400000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 13807241 - 13807290
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  13807241 tactccctccggtcttatttataagaaaaagttgactttttagattcatt 13807290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 45533379 - 45533330
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  45533379 tacttcctcctgtcttatttataagaaacatttgacttttttaattcatt 45533330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 4826913 - 4826861
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  4826913 taatactccctccggtcctatatataagaaacaatttacttttttgattcatt 4826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 45441428 - 45441480
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  45441428 taattaatactcgctccggtcctatttatatgaaatatttgacttttttgatt 45441480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 605
Target Start/End: Original strand, 9979794 - 9979845
Alignment:
Q  554 aattaatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||||| |||||| |||||||||||||||| |||||||| ||||||||    
T  9979794 aattaatacttcctccgatcttatttataagaaatatttgactattttgatt 9979845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 609
Target Start/End: Complemental strand, 10007731 - 10007676
Alignment:
Q  554 aattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| |||||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  10007731 aattattactccctccggtcctatttataagaaaaagttgactttttagattcatt 10007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 39153296 - 39153335
Alignment:
Q  570 ggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  39153296 ggtcctatttataagaaacatttgacttttttgattcatt 39153335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 2523920 - 2523870
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  2523920 atactccctccggtcctatttataagaaaaagttgactttttagattcatt 2523870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 33901188 - 33901138
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||||    
T  33901188 atacttcctccggtctttattataagaaacatttgactttttagattcatt 33901138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 2680858 - 2680906
Alignment:
Q  561 actccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| || || ||||||||||||| |||||||||||||||||||||    
T  2680858 actcccttcgatcctatttataagaaatatttgacttttttgattcatt 2680906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 533
Target Start/End: Original strand, 8149911 - 8149947
Alignment:
Q  497 attgattcatttcgtttttcaatacaatattaattac 533  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8149911 attgattcatttcatttttcaatacaatattaattac 8149947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 601
Target Start/End: Original strand, 10007570 - 10007614
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgactttttt 601  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  10007570 taatactccctcctgtcctatttataataaacatttgactttttt 10007614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 10462377 - 10462425
Alignment:
Q  561 actccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| |||||||||||||||| || ||||||||| ||||||||    
T  10462377 actccctccgatcttatttataagaaaaatgtgactttttagattcatt 10462425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 609
Target Start/End: Complemental strand, 3411495 - 3411432
Alignment:
Q  546 ataattttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||| |||||||||||||| || ||||||||||| | |||||||||||| ||| ||||    
T  3411495 ataaatttaaataatactccctccgatcctatttataagagaaatttgactttttagatacatt 3411432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Original strand, 28020002 - 28020049
Alignment:
Q  562 ctccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| |||| ||||||||||||||| || ||||||||||||||||    
T  28020002 ctccctctggtcctatttataagaaacaatttacttttttgattcatt 28020049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 32811375 - 32811426
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||| || ||| ||||||||||| || ||||||||||||||||    
T  32811375 aatactccctccgatcctatatataagaaacaatttacttttttgattcatt 32811426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 23870977 - 23871027
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| |||||||||||||||| |||||| ||||| ||| ||||    
T  23870977 atactccctccgatcttatttataagaaaaatttgattttttcgatacatt 23871027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 27231832 - 27231882
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |||  |||||||||| || ||||||||||||||||    
T  27231832 atactccctccggtcctatacataagaaacaatttacttttttgattcatt 27231882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 28298988 - 28298954
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| |||||||||||||||||||||||||    
T  28298988 tatttataaaaaacatttgacttttttgattcatt 28298954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 44682564 - 44682614
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| |||||||| ||||||||||||| |||||||||||  ||||||||    
T  44682564 atactctctccggtcctatttataagaaaaatttgacttttgagattcatt 44682614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45025744 - 45025694
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| |||||||||||  ||||||||||||||||| ||||| ||||||||    
T  45025744 atacttcctccggtctttattataagaaacatttgattttttagattcatt 45025694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 9979949 - 9979904
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||||||  ||||||||||||||| |||||||||||| ||||    
T  9979949 tactccctccgaacttatttataagaaaaatttgactttttagatt 9979904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 12763382 - 12763329
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||| |||| | | |||||||||| ||| ||||    
T  12763382 ttaatactccctccggtcttatttacaagagaaaattgactttttagatacatt 12763329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 24163418 - 24163369
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| |||||| | |||||||||||||||||| |||||||| |||||||    
T  24163418 tactctctccggacctatttataagaaacatttcacttttttaattcatt 24163369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 24164669 - 24164616
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| || |  ||||||||||||||||||||||| | ||||||    
T  24164669 ttaatactccctccgatccttattataagaaacatttgactttttaggttcatt 24164616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 36245525 - 36245476
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| ||| ||||||||||||| | |||||||||| ||||||||    
T  36245525 tactccctcctgtcctatttataagaaaaaattgactttttagattcatt 36245476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 1366599 - 1366643
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||| ||||||||||| || ||||||||||||||||    
T  1366599 cctccggtcctatatataagaaacaatttacttttttgattcatt 1366643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 585
Target Start/End: Original strand, 1738440 - 1738472
Alignment:
Q  553 taattaatactccctccggtcttatttataaga 585  Q
    ||||||||||||||||||||| |||||||||||    
T  1738440 taattaatactccctccggtcctatttataaga 1738472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 601
Target Start/End: Original strand, 29365629 - 29365661
Alignment:
Q  569 cggtcttatttataagaaacatttgactttttt 601  Q
    ||||| |||||||||||||||||||||||||||    
T  29365629 cggtcctatttataagaaacatttgactttttt 29365661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 47942841 - 47942885
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||  ||| |||| ||||||||||||||||    
T  47942841 cctccggtcttatttatataaaatatttcacttttttgattcatt 47942885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 47948271 - 47948315
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||  ||| |||| ||||||||||||||||    
T  47948271 cctccggtcttatttatataaaatatttcacttttttgattcatt 47948315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 8e-29; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 496 - 609
Target Start/End: Complemental strand, 26924426 - 26924313
Alignment:
Q  496 aattgattcatttcgtttttcaatacaatattaattacnnnnnnnnaattataattttaattaatactccctccggtcttatttataagaaacatttgac 595  Q
    ||||||||||||||  ||||||||||||||||||||||        ||||||||   ||||||||||||||||||||| |||||||||||||||||||||    
T  26924426 aattgattcatttcacttttcaatacaatattaattacattttttcaattataacactaattaatactccctccggtcctatttataagaaacatttgac 26924327  T
Q  596 ttttttgattcatt 609  Q
    ||||||||||||||    
T  26924326 ttttttgattcatt 26924313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 26760108 - 26760221
Alignment:
Q  496 aattgattcatttcgtttttcaatacaatattaattacnnnnnnnnaattataattttaattaatactccctccggtcttatttataagaaacatttgac 595  Q
    ||||||||||||||  ||||||||||||||||||||||        ||||||||   ||||||||| |||||| |||| |||||||||||||||||||||    
T  26760108 aattgattcatttcacttttcaatacaatattaattacattttttcaattataacactaattaatattccctcgggtcctatttataagaaacatttgac 26760207  T
Q  596 ttttttgattcatt 609  Q
    ||||||||||||||    
T  26760208 ttttttgattcatt 26760221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 26070975 - 26070924
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  26070975 aatactctctccggtcttatttataagaaacattttacttttttgattcatt 26070924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 38040274 - 38040324
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  38040274 atactcccttcggtcctatttataagaaacatttgacttttttgattcatt 38040324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 52427346 - 52427395
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  52427346 tactccctccggtcttattcataagaaacgtttgacttttttgattcatt 52427395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 34332628 - 34332576
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  34332628 taataccccctctggtcctatttataagaaacatttgacttttttgattcatt 34332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 609
Target Start/End: Original strand, 2351123 - 2351181
Alignment:
Q  551 tttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| || ||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  2351123 tttaaatattactccctccgatcctatttataagaaacatttaacttttttgattcatt 2351181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 610
Target Start/End: Original strand, 27819310 - 27819360
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcattt 610  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  27819310 tactccatccggtcttatttataaaaaatatttgacttttttgattcattt 27819360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 34662831 - 34662781
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  34662831 atactccctccggtcttatatataagaaacaatttacttttttgattcatt 34662781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 519832 - 519877
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  519832 tactccctccggtcctatttataataaacatttgacttttttgatt 519877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 44939070 - 44939114
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||    
T  44939070 cctccggtcctatttataagaaacatttgactttttttattcatt 44939114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 8971375 - 8971328
Alignment:
Q  562 ctccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  8971375 ctccctcaggtcctatttataagaaatatttgacttttttgattcatt 8971328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 37179064 - 37179014
Alignment:
Q  555 attaatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||| ||||||| | || ||||||||||||||||||||||||||||    
T  37179064 attaatacttcctccggccctaattataagaaacatttgacttttttgatt 37179014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 38737945 - 38737979
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||||||||||||    
T  38737945 tatttataagaaacatttgacttttttgattcatt 38737979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 18744704 - 18744655
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  18744704 tactccctccggtcctatttaaaagaaacatttaactttttttattcatt 18744655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 26070823 - 26070872
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||  | |||||||||||| ||||||||    
T  26070823 tactccctccggtcttatttataagtgaaatttgactttttagattcatt 26070872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 29892279 - 29892230
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |||||||| |||||| |||||||||| ||||||||    
T  29892279 tactccctccggtcctatttataggaaacaattgactttttagattcatt 29892230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 38040425 - 38040376
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||| ||||||||||||| |||||||||||| ||||||||    
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcatt 38040376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 39748618 - 39748667
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||    
T  39748618 tactccctcagatcttatttataagaaatatttgacttttttaattcatt 39748667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 43929345 - 43929394
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  43929345 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 43929394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 47678255 - 47678304
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  47678255 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 47678304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 26924209 - 26924261
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||  |||||||    
T  26924209 taatactccctccggtcctatttataagaaaaagttgactttttaaattcatt 26924261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 49944977 - 49944933
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||    
T  49944977 cctccggtcctatttacaagaaacatttgatttttttgattcatt 49944933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 18038839 - 18038788
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||| |  |||||| |||||||||||||||| ||||||||    
T  18038839 aatactccctccggtccttattataaaaaacatttgactttttagattcatt 18038788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 574 - 609
Target Start/End: Original strand, 34146818 - 34146853
Alignment:
Q  574 ttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34146818 ttatttataagaaacatttaacttttttgattcatt 34146853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 50155449 - 50155398
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| ||||||||| ||||||||||||| | |||||||||| ||||||||    
T  50155449 aatacttcctccggtcctatttataagaaaaagttgactttttagattcatt 50155398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 601
Target Start/End: Original strand, 5891724 - 5891766
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgactttttt 601  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||    
T  5891724 atactccctccggtcctatttataagaaatatttaactttttt 5891766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 11386304 - 11386255
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| | ||||| |||||||||||||||||||||| ||||||||||||    
T  11386304 atactcctttcggtcctatttataagaaacatttgact-ttttgattcatt 11386255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 15286023 - 15286057
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||| |||||||    
T  15286023 tatttataagaaacatttgacttttttaattcatt 15286057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 15699459 - 15699512
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| |  ||||||||||| ||||| ||||| ||||||||    
T  15699459 ttaatactccctccggtccttattataagaaacttttgattttttagattcatt 15699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 532
Target Start/End: Complemental strand, 17724872 - 17724835
Alignment:
Q  495 taattgattcatttcgtttttcaatacaatattaatta 532  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  17724872 taattgagtcatttcatttttcaatacaatattaatta 17724835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 600
Target Start/End: Complemental strand, 26550441 - 26550396
Alignment:
Q  555 attaatactccctccggtcttatttataagaaacatttgacttttt 600  Q
    ||||||||||||||||||| ||||||||||| ||| || |||||||    
T  26550441 attaatactccctccggtcatatttataagagacaatttacttttt 26550396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 29256747 - 29256698
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||| ||||||||||||| | |||||||||| ||||||||    
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcatt 29256698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 610
Target Start/End: Original strand, 38590070 - 38590115
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcattt 610  Q
    ||||||||  ||| |||||||| |||||||||||||||||||||||    
T  38590070 cctccggttctatatataagaagcatttgacttttttgattcattt 38590115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 47844682 - 47844633
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||| || ||| ||||||||||| || ||||||||||||||||    
T  47844682 tactccctccgatcctatatataagaaacaatttacttttttgattcatt 47844633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 605
Target Start/End: Original strand, 47912824 - 47912861
Alignment:
Q  568 ccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  47912824 ccggtcctatttataagaaatatttgacttttttgatt 47912861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 6793746 - 6793694
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||  ||||||| |||||| ||||||||||| |||||| |||||||||    
T  6793746 taatactctatccggtcctatttaaaagaaacatttaacttttatgattcatt 6793694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 7375182 - 7375230
Alignment:
Q  561 actccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||| ||||||||| ||| ||||||||||||||| |||||    
T  7375182 actccctccagtcctatttataaaaaatatttgacttttttgaatcatt 7375230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 13321866 - 13321814
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| |||| |  ||||||||||||||||| ||||| ||||||||    
T  13321866 taatactccctctggtccttattataagaaacatttgattttttagattcatt 13321814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 26760325 - 26760273
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||||||||||||| | |||| |||||  |||||||    
T  26760325 taatactccctccggtcctatttataagaaaaaattgattttttaaattcatt 26760273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 37515242 - 37515190
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| | ||||| ||||||||||||| |||| ||||||| ||||||||    
T  37515242 taatactcctttcggtcctatttataagaaaaatttaactttttagattcatt 37515190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 30192052 - 30191996
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  30192052 taattaatactccctccggtcgtatttataagaaacatttaacttttttgattcatt 30191996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 605
Target Start/End: Original strand, 44111743 - 44111789
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  44111743 atactccctccggtcctatttataagaaacatttgacttttttgatt 44111789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 32714268 - 32714317
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  32714268 tactccttccggttttatttataagaaacatttgacttttttgattcatt 32714317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 48361201 - 48361152
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  48361201 tactccctcctgtcctatttataagaaacatttgacttttttgattcatt 48361152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 8347797 - 8347745
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| |||||||    
T  8347797 taatacttcctccggtctaatttataagaaacatttgactttttttattcatt 8347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 48196042 - 48195990
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  48196042 taatacttcctccggtcctatttataagaaacatttgacttttttggttcatt 48195990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 48361048 - 48361100
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  48361048 taatactccctccggtcctatttataagaaaaatttgactttttagattcatt 48361100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 36132632 - 36132683
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  36132632 aatactccctccagtcctatttataagaaatatttgacttttttgattcatt 36132683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 47943878 - 47943827
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  47943878 aatactccctccggtcttatttataaataacatttgacatttttgattcatt 47943827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 609
Target Start/End: Complemental strand, 3163037 - 3162995
Alignment:
Q  567 tccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  3163037 tccggtcttatttataaaaaacatttgacttttttgattcatt 3162995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 44111894 - 44111845
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  44111894 tactccctccggtcttatttataagaaaaagttgactttttagattcatt 44111845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 40780246 - 40780298
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  40780246 taatactccctccggtcctatatataagaaacaatttacttttttgattcatt 40780298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 50121588 - 50121537
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| |||||||    
T  50121588 aatactccctctagtcctatttataagaaacatttgacttttttaattcatt 50121537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 53225794 - 53225744
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  53225794 atactccctccggtcctatttataagaaaaaattgactttttagattcatt 53225744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 4386285 - 4386236
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||| || |||||||||||||| |||||||||||||||||||||    
T  4386285 tacttcctccagttttatttataagaaaaatttgacttttttgattcatt 4386236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 29686395 - 29686448
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| |  ||||||||||||||||||||||| | ||||||    
T  29686395 ttaatactccctccggtccttattataagaaacatttgactttttaggttcatt 29686448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 47866184 - 47866135
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  47866184 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 47866135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 50121436 - 50121481
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||    
T  50121436 tactcccttcggtcttatttataagaaaaatttgactttttagatt 50121481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 19150870 - 19150823
Alignment:
Q  562 ctccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| |||| |||||||||||||||||| ||||||| ||||||||    
T  19150870 ctccctctggtcctatttataagaaacattttactttttcgattcatt 19150823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 609
Target Start/End: Complemental strand, 42804414 - 42804355
Alignment:
Q  550 ttttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| || ||||||||||||||| ||| ||||||||||| || | ||||||||||||||    
T  42804414 ttttattttatactccctccggtcctatatataagaaacaatttatttttttgattcatt 42804355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 3162893 - 3162943
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| |||||||||||||||||||||| | ||||||||||  |||||||    
T  3162893 atactcactccggtcttatttataagaaaaaattgactttttaaattcatt 3162943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 17284733 - 17284783
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |||||||||  || |||||| ||||||||||||||    
T  17284733 atactccctccggtcctatttataatgaatatttgatttttttgattcatt 17284783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 20745330 - 20745380
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||| ||||| || ||||||||||||||||    
T  20745330 atactccctccggtcctatatataaaaaacaatttacttttttgattcatt 20745380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 25477543 - 25477593
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| ||||| ||| ||||||||| ||| |||||||||||||||||||||    
T  25477543 atactacctccagtcctatttataaaaaatatttgacttttttgattcatt 25477593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 37991484 - 37991534
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||  ||| |||||||||||||||||| | ||||||||||||||    
T  37991484 atactccctctagtcctatttataagaaacatttaaattttttgattcatt 37991534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 41328756 - 41328722
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||| |||||||||||||||||||||    
T  41328756 tatttataagaaatatttgacttttttgattcatt 41328722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 42670898 - 42670864
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||| ||||||||    
T  42670898 tatttataagaaacatttgactttttagattcatt 42670864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 609
Target Start/End: Complemental strand, 43020901 - 43020855
Alignment:
Q  563 tccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  43020901 tccctccggtcctatatataagaaacaatttacttttttgattcatt 43020855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 609
Target Start/End: Original strand, 44061394 - 44061436
Alignment:
Q  567 tccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||    
T  44061394 tccggtcatatttataagaaacgtttgagttttttgattcatt 44061436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 607
Target Start/End: Original strand, 55190663 - 55190713
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattca 607  Q
    |||||||||||| |||| ||| ||||||||||| || ||||||||||||||    
T  55190663 taatactccctctggtcctatatataagaaacaatttacttttttgattca 55190713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 8347644 - 8347693
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| |||| || ||||||||||||| |||||||||||| ||||||||    
T  8347644 tactccatccgctcctatttataagaaaaatttgactttttagattcatt 8347693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 9044386 - 9044435
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| ||| || ||||| |||||||| |||||||||||||||||||||    
T  9044386 tactccttccagttttattcataagaaatatttgacttttttgattcatt 9044435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 32193474 - 32193523
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |  |||||||||||| |||||||||||| ||||||    
T  32193474 tactccctccggtccttattataagaaacaattgacttttttggttcatt 32193523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 36196357 - 36196414
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgattcattt 610  Q
    |||||| |||||||||||||| |  |||||||||||| |||| ||||||| |||||||    
T  36196357 taattattactccctccggtccttattataagaaacaattgatttttttggttcattt 36196414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 42160122 - 42160073
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| |||||||||||  ||||||||||||||||||||||| || |||||    
T  42160122 tacttcctccggtctttattataagaaacatttgactttttagaatcatt 42160073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 45096723 - 45096678
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||||  || ||||||||| |||||||||||||||||||||    
T  45096723 tactccctcctatcatatttataaaaaacatttgacttttttgatt 45096678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 533
Target Start/End: Original strand, 47386110 - 47386147
Alignment:
Q  496 aattgattcatttcgtttttcaatacaatattaattac 533  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  47386110 aattgattcatttcacttttcaatacaatattaattac 47386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 609
Target Start/End: Original strand, 53658367 - 53658412
Alignment:
Q  564 ccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| ||||||||||||| |||| |||||||| |||||||    
T  53658367 ccctccggtcatatttataagaaatatttaactttttttattcatt 53658412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 533
Target Start/End: Original strand, 54217293 - 54217330
Alignment:
Q  496 aattgattcatttcgtttttcaatacaatattaattac 533  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  54217293 aattgactcatttcatttttcaatacaatattaattac 54217330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 4758773 - 4758825
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| |||||| |||| ||| |||||||||| ||| ||||    
T  4758773 taatactccctccggtcctatttacaagagacagttgactttttagatacatt 4758825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 20459237 - 20459289
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||  ||||||| ||| ||||||||||| || ||||||||||||||||    
T  20459237 taatactctatccggtcctatatataagaaacaatttacttttttgattcatt 20459289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 41116566 - 41116610
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||||||||||||| |||| ||||||| ||||||||    
T  41116566 cctccggtcctatttataagaaaaatttaactttttagattcatt 41116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 46434104 - 46434144
Alignment:
Q  566 ctccggtcttatttataagaaacatttgacttttttgattc 606  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  46434104 ctccggtcttatttataaaaaatatttgactttttagattc 46434144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 497 - 533
Target Start/End: Complemental strand, 55360505 - 55360469
Alignment:
Q  497 attgattcatttcgtttttcaatacaatattaattac 533  Q
    |||||||||||||  ||||||||||||||||||||||    
T  55360505 attgattcatttcacttttcaatacaatattaattac 55360469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 554 - 609
Target Start/End: Complemental strand, 9077741 - 9077686
Alignment:
Q  554 aattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  9077741 aattaatattccctccggtcttatttataagaaatatttgacttttttgattcatt 9077686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 554 - 609
Target Start/End: Complemental strand, 30895339 - 30895284
Alignment:
Q  554 aattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  30895339 aattaatactccatccagtcttatttataagaaacatttgacttttttgattcatt 30895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 25538100 - 25538048
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  25538100 taatactccatccggtcttatttataagaaatatttaacttttttgattcatt 25538048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 17265718 - 17265769
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  17265718 aatactccttccgatcctatttataagaaacatttgacttttttgattcatt 17265769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 3065033 - 3064983
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  3065033 atactccctccggtcctatttataagaaatattttacttttttgattcatt 3064983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 33119903 - 33119952
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  33119903 tactcccttcggtcctatttataagaaacatttgacttctttgattcatt 33119952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 2230499 - 2230449
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |||||||||||||  ||||||||||| ||||||||    
T  2230499 atactccctccggtcctatttataagaaaactttgactttttagattcatt 2230449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 2943391 - 2943342
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  2943391 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 2943342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 8053005 - 8052956
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| |||||||    
T  8053005 tacttcctccggtcatatttataagaaatatttgacttttttaattcatt 8052956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 27909124 - 27909075
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| |||| |||||| |||||||||||||||||||| |||||||    
T  27909124 tactccctctggtcctatttacaagaaacatttgacttttttaattcatt 27909075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 605
Target Start/End: Original strand, 2972161 - 2972208
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||| ||||||||||||||||||| | |||||||||||| ||||    
T  2972161 aatactccatccggtcttatttataagagaaatttgactttttagatt 2972208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Original strand, 28630754 - 28630801
Alignment:
Q  562 ctccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||||    
T  28630754 ctccttccggtcctatttataagaaaaatttgactttttttattcatt 28630801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 29168474 - 29168525
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||||||||| ||  ||||||||||| ||||||||    
T  29168474 aatactccctccggtctcatttataagcaaattttgactttttagattcatt 29168525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 2913331 - 2913381
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |  ||||||| ||||||||||||||| ||||||||    
T  2913331 atactccctccggtccttattataagcaacatttgactttttagattcatt 2913381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 30627957 - 30627923
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||| |||||||||    
T  30627957 tatttataagaaacatttgacttttctgattcatt 30627923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 2810231 - 2810178
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| ||| ||||||||| | || |||||||| |||||||    
T  2810231 ttaatactccctccggtcctatatataagaaataatttacttttttcattcatt 2810178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 7405597 - 7405544
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||| |||| | | |||||||||| ||| ||||    
T  7405597 ttaatactccctccggtcttatttacaagagaaaattgactttttagatacatt 7405544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 23916276 - 23916227
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |  |||||||||||| |||||||||| ||||||||    
T  23916276 tactccctccggtccttattataagaaacaattgactttttagattcatt 23916227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 12999751 - 12999803
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||  ||| |||||| ||||||||||| ||||||||||||||||    
T  12999751 taatactccttcatgtcgtatttacaagaaacatttaacttttttgattcatt 12999803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 600
Target Start/End: Original strand, 17700147 - 17700187
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttt 600  Q
    |||||||||  ||| ||||||||||||||||||||||||||    
T  17700147 tactccctctcgtcctatttataagaaacatttgacttttt 17700187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 600
Target Start/End: Original strand, 30627822 - 30627862
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttt 600  Q
    ||||| |||||||||||||||||||||| |||||| |||||    
T  30627822 tactcactccggtcttatttataagaaaaatttgatttttt 30627862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 31971026 - 31971078
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||| |||| | | |||||||||| ||| ||||    
T  31971026 taatactccctccggtcttatttacaagagaaagttgactttttagatacatt 31971078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 8266382 - 8266331
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8266382 aatactccctccggtcctatttataagaaacatttgacttttttgattcatt 8266331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 21663035 - 21662986
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21663035 tactccctccggtcttatttataagaaacatttaacttttttgattcatt 21662986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 53441902 - 53441955
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  53441902 ttaatactccctccggtcctatttataagaaacattttacttttttgattcatt 53441955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 51517107 - 51517057
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  51517107 atactccctccggtcctatttataagaaacatttgacttttttggttcatt 51517057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 609
Target Start/End: Original strand, 21662880 - 21662934
Alignment:
Q  555 attaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  21662880 attaatactccctccggtcctatttataagaaaaagttgactttttagattcatt 21662934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 12064908 - 12064957
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  12064908 tactccctccggtcctacttataagaaacattttacttttttgattcatt 12064957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 26999177 - 26999121
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||| ||| ||||    
T  26999177 taattaatactccctccggtcctatttacaagagacatttgactttttagatacatt 26999121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 28406462 - 28406512
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattc 606  Q
    |||||||||||||||||| |||||| |||||||| |||||||||| |||||    
T  28406462 ttaatactccctccggtcctatttacaagaaacaattgactttttagattc 28406512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 43343580 - 43343546
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||||||||||||    
T  43343580 tatttataagaaacatttgacttttttgattcatt 43343546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 601
Target Start/End: Original strand, 13622486 - 13622527
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgactttttt 601  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  13622486 tactcccaccggtcctatttataagaaacatttgactttttt 13622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 19649587 - 19649627
Alignment:
Q  569 cggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  19649587 cggttttatttacaagaaacatttgacttttttgattcatt 19649627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 601
Target Start/End: Original strand, 23222966 - 23222998
Alignment:
Q  569 cggtcttatttataagaaacatttgactttttt 601  Q
    |||||||||||||||||||||||||||||||||    
T  23222966 cggtcttatttataagaaacatttgactttttt 23222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 45010746 - 45010794
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||||||||    
T  45010746 taatactccctctagtcctatttataagaaatatttgacttttttgatt 45010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 31376172 - 31376223
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||| |  ||||||||||||||||||||||| | ||||||    
T  31376172 aatactccctccggtccttattataagaaacatttgactttttaggttcatt 31376223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 50354387 - 50354336
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| |||||||| ||||||||| ||| |||||| ||||||||||||||    
T  50354387 aatactctctccggtcctatttataaaaaatatttgatttttttgattcatt 50354336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 9197095 - 9197129
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||| |||||||||||||||||||||    
T  9197095 tatttataagaaatatttgacttttttgattcatt 9197129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 609
Target Start/End: Complemental strand, 18765416 - 18765358
Alignment:
Q  551 tttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||||||| |||||| |||||||| || ||||||| ||| ||||    
T  18765416 tttaattaatactccttccggtcctatttacaagaaacaatttactttttagatgcatt 18765358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 28406617 - 28406567
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |||||| |||||||| |||||||||| | ||||||    
T  28406617 atactccctccggtcctatttacaagaaacaattgactttttaggttcatt 28406567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 609
Target Start/End: Original strand, 40460335 - 40460393
Alignment:
Q  551 tttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| ||||||| | ||||||||||||||||||||| | || ||||||| ||||||||    
T  40460335 tttaactaatacttcatccggtcttatttataagaaaaaattaactttttagattcatt 40460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 608
Target Start/End: Original strand, 53703727 - 53703777
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcat 608  Q
    |||||||||||||||| |  |||||||||||| |||||||||||| |||||    
T  53703727 aatactccctccggtccttattataagaaacaattgacttttttggttcat 53703777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 609
Target Start/End: Complemental strand, 23920731 - 23920702
Alignment:
Q  580 ataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||    
T  23920731 ataagaaacatttgacttttttgattcatt 23920702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 40198390 - 40198443
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||  ||| ||||||||||||||||||| |||| |||||| |||||||    
T  40198390 ttaatactctatccagtcttatttataagaaacaattgaatttttttattcatt 40198443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 42225711 - 42225662
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||| || ||||| || ||||||||||| ||||    
T  42225711 tactccctccggtcttatttacaaaaaacaatttacttttttgatacatt 42225662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 51516957 - 51517002
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||||||||| ||||||||||||| | |||||||||| ||||    
T  51516957 tactccctccggtcctatttataagaaaaagttgactttttagatt 51517002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 53442056 - 53442007
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||||||||||||| | ||||||||||  |||||||    
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcatt 53442007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 54537592 - 54537543
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| ||||| |||||||||||||   |||||||||||||||||||    
T  54537592 tactcccttcggtcctatttataagaaattattgacttttttgattcatt 54537543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 9236227 - 9236187
Alignment:
Q  569 cggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| |||| |||| |||||||||||||||||||||    
T  9236227 cggtcttatatatacgaaatatttgacttttttgattcatt 9236187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 609
Target Start/End: Complemental strand, 19649727 - 19649679
Alignment:
Q  561 actccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| |||| |||||| ||||||||||||| ||||| ||||||||    
T  19649727 actccctctggtcctatttacaagaaacatttgattttttagattcatt 19649679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 10228216 - 10228167
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10228216 tactccctccggtcttatttattagaaacatttgacttttttgattcatt 10228167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 13789728 - 13789780
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  13789728 taatactccctccggtcctatttataagaaacattttacttttttgattcatt 13789780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 33478257 - 33478207
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  33478257 atactccctccggtcctatttataagaaacatttgacatttttgattcatt 33478207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 605
Target Start/End: Original strand, 5002142 - 5002184
Alignment:
Q  563 tccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  5002142 tccctccggtcctatttataagaaacatttgacttttttgatt 5002184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 29031035 - 29031085
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  29031035 atactccctccggtcttatatataagaaacaatttacttttttgattcatt 29031085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 29299510 - 29299464
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttga 603  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  29299510 taatactccctccggtcctagttataagaaacatttgacttttttga 29299464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 18473624 - 18473575
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  18473624 tactccctttggtcctatttataagaaacatttgacttttttgattcatt 18473575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 34297173 - 34297222
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  34297173 tactccatccggtcttatttataagaaatatttgacttttttaattcatt 34297222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 22102059 - 22102012
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||    
T  22102059 aatactccctccgatcatatttataagaaatatttgacttttttgatt 22102012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 29299355 - 29299405
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||||||||||||| |||||| ||||| ||||||||    
T  29299355 atactccctccggtcctatttataagaaaaatttgattttttagattcatt 29299405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 38394578 - 38394528
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| || || |||||||||||||||||| ||||||||||||||||    
T  38394578 atactcccttcgatcctatttataagaaacattttacttttttgattcatt 38394528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 1015155 - 1015204
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  1015155 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 1015204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 1643497 - 1643444
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||||    
T  1643497 ttaatactccctccggtcctatttataagagacagttgactttttagatacatt 1643444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 22731258 - 22731307
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  22731258 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 22731307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 532
Target Start/End: Complemental strand, 36446835 - 36446798
Alignment:
Q  495 taattgattcatttcgtttttcaatacaatattaatta 532  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36446835 taattgattcatttcatttttcaatacaatattaatta 36446798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 532
Target Start/End: Complemental strand, 36469256 - 36469219
Alignment:
Q  495 taattgattcatttcgtttttcaatacaatattaatta 532  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36469256 taattgattcatttcatttttcaatacaatattaatta 36469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 19295953 - 19296005
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||| || ||||||||||||||| ||||| ||||||||||||||    
T  19295953 taatactccttccagttttatttataagaaacgtttgatttttttgattcatt 19296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 3814121 - 3814074
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattc 606  Q
    ||||||||||||||||| ||||||||||| | |||||||||| |||||    
T  3814121 atactccctccggtcttgtttataagaaaaaattgactttttagattc 3814074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 21488280 - 21488331
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||  ||| ||||||||||||| ||||||||||||| |||||||    
T  21488280 aatactccctcatgtcctatttataagaaatatttgacttttttaattcatt 21488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 601
Target Start/End: Original strand, 13664952 - 13664986
Alignment:
Q  567 tccggtcttatttataagaaacatttgactttttt 601  Q
    ||||||| |||||||||||||||||||||||||||    
T  13664952 tccggtcatatttataagaaacatttgactttttt 13664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 15968460 - 15968410
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| |||| ||| ||||||||||| || ||||||||||||||||    
T  15968460 atactccctcaggtcctatatataagaaacaatttacttttttgattcatt 15968410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 27488496 - 27488446
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| |||||||| ||| ||||||||||| || ||||||||||||||||    
T  27488496 atactctctccggtcctatatataagaaacaatttacttttttgattcatt 27488446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 919641 - 919690
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| ||||||| ||| |||| |||| |||||||||||||||||||||    
T  919641 tactccatccggtcatatatataggaaatatttgacttttttgattcatt 919690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 7945832 - 7945885
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| |||||| |||||||| || ||||||| ||| ||||    
T  7945832 ttaatactccctccggtcctatttacaagaaacaatttactttttagatacatt 7945885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 8680690 - 8680641
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |  ||||||||||||||||||||||| | ||||||    
T  8680690 tactccctccggtccttattataagaaacatttgactttttaggttcatt 8680641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 29031185 - 29031136
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||||||||||||| | || ||||||| ||||||||    
T  29031185 tactccctccggtcctatttataagaaaaagttaactttttagattcatt 29031136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 30132937 - 30132888
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |  |||||||||||| || ||||||||||||||||    
T  30132937 tactccctccggtccttattataagaaacaattaacttttttgattcatt 30132888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 38394427 - 38394476
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||| || ||||||||||||| | |||||||||| ||||||||    
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcatt 38394476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 599
Target Start/End: Complemental strand, 73934 - 73894
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgactttt 599  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  73934 atactccctccggtctttattataagaaacaattgactttt 73894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 1015307 - 1015255
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||  ||||||||||||| | || ||||||| ||||||||    
T  1015307 taatactccctccggttctatttataagaaaaagttaactttttagattcatt 1015255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 601
Target Start/End: Complemental strand, 5355703 - 5355659
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgactttttt 601  Q
    ||||||||||||||||| |  |||||||||||| |||||||||||    
T  5355703 taatactccctccggtccttattataagaaacagttgactttttt 5355659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 26327691 - 26327639
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||||||||||||||  ||| ||||||||| | || ||||||||||||    
T  26327691 taattaatactccctccggttctatatataagaaagaatttacttttttgatt 26327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 532
Target Start/End: Complemental strand, 39061111 - 39061075
Alignment:
Q  496 aattgattcatttcgtttttcaatacaatattaatta 532  Q
    ||||||||||||||  |||||||||||||||||||||    
T  39061111 aattgattcatttcacttttcaatacaatattaatta 39061075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 7e-17; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 30761527 - 30761478
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30761527 tactccctccggtcctatttataagaaacatttgacttttttgattcatt 30761478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 12962854 - 12962805
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  12962854 tactccctctggtcctatttataagaaacatttgacttttttgattcatt 12962805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 9152376 - 9152427
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  9152376 aatactccctccggtcctatttacaagaaacatttgacttttttgagtcatt 9152427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 9152529 - 9152479
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  9152529 atactccctccggtcttatttacaagaaacaattgactttttagattcatt 9152479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 29989042 - 29988992
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  29989042 atactccctccagtcctatttagaagaaacatttgacttttttgattcatt 29988992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 43713972 - 43714022
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  43713972 atactccctccgctcttatttataagaaacaattgatttttttgattcatt 43714022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 38982998 - 38983047
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  38982998 tactccctccggtcctatttataaaaaatatttgacttttttgattcatt 38983047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 4063423 - 4063371
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  4063423 taatactccctccggtcctatatataagaaacaatttacttttttgattcatt 4063371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 609
Target Start/End: Complemental strand, 2936427 - 2936393
Alignment:
Q  575 tatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||||||||||||||    
T  2936427 tatttataagaaacatttgacttttttgattcatt 2936393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 30761376 - 30761426
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| ||||||||| ||||||||||||||||||||||||||  |||||||    
T  30761376 atactacctccggtcctatttataagaaacatttgactttttacattcatt 30761426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45571179 - 45571129
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45571179 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45571129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45574846 - 45574796
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45574846 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45574796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45578513 - 45578463
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45578513 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45578463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45582180 - 45582130
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45582180 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45582130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45585847 - 45585797
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45585847 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45585797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45589514 - 45589464
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45589514 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45589464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45593181 - 45593131
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45593181 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45593131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45596848 - 45596798
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45596848 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45596798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45600515 - 45600465
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45600515 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45600465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45604182 - 45604132
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45604182 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45604132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45607849 - 45607799
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45607849 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45607799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45611516 - 45611466
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45611516 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45611466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 45615183 - 45615133
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45615183 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 45615133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 7943438 - 7943487
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||||||||||||||| | ||||||||||||| |||||||    
T  7943438 tacttcctccggtcttatttataagagatatttgactttttttattcatt 7943487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 11030191 - 11030240
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| |||||| || ||| |||||||||||||||||||||||||||||||    
T  11030191 tacttcctccgatcctatatataagaaacatttgacttttttgattcatt 11030240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 609
Target Start/End: Original strand, 11182156 - 11182213
Alignment:
Q  552 ttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| || ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  11182156 ttaattagtattcccttcggtcctatatataagcaacatttgacttttttgattcatt 11182213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 11794599 - 11794550
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcat 608  Q
    ||||||||||||||| |||||||||||||||||| || |||||| |||||    
T  11794599 atactccctccggtcctatttataagaaacattttacatttttgtttcat 11794550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 45034546 - 45034497
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  45034546 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 45034497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 36881679 - 36881627
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| ||  ||| |||||| ||||||||||||||||||||||||||||    
T  36881679 taatactccatctagtcctatttacaagaaacatttgacttttttgattcatt 36881627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 572 - 607
Target Start/End: Complemental strand, 5109500 - 5109465
Alignment:
Q  572 tcttatttataagaaacatttgacttttttgattca 607  Q
    |||||||||||||||| |||||||||||||||||||    
T  5109500 tcttatttataagaaatatttgacttttttgattca 5109465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 609
Target Start/End: Complemental strand, 28494847 - 28494804
Alignment:
Q  566 ctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||  |||||||||||||||||||| ||||||||||||||    
T  28494847 ctccggttctatttataagaaacatttgatttttttgattcatt 28494804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 32457222 - 32457261
Alignment:
Q  570 ggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  32457222 ggtcctatttataagaaatatttgacttttttgattcatt 32457261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 33273967 - 33274018
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||| |  |||||||||||||  ||||||||||||||||||||    
T  33273967 aatactccctccgattctatttataagaaaactttgacttttttgattcatt 33274018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 38554467 - 38554506
Alignment:
Q  570 ggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  38554467 ggtcctatttataagaaacatttgactattttgattcatt 38554506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 578 - 609
Target Start/End: Original strand, 41153128 - 41153159
Alignment:
Q  578 ttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||||    
T  41153128 ttataagaaacatttgacttttttgattcatt 41153159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 41153261 - 41153211
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| || ||||||||||||| | |||||||||| ||||||||    
T  41153261 atactccctccgatcctatttataagaaaaagttgactttttagattcatt 41153211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 601
Target Start/End: Complemental strand, 20555406 - 20555365
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgactttttt 601  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  20555406 tactccctccggtcctatttataggaaacatttaactttttt 20555365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 28014422 - 28014373
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| |||||| || ||||||||||||||||||||| ||||| |||||||    
T  28014422 tacttcctccgatcctatttataagaaacatttgaccttttttattcatt 28014373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 30758719 - 30758768
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| || ||||| ||||||||||||| ||||||||||||| |||||||    
T  30758719 tactctcttcggtcctatttataagaaatatttgactttttttattcatt 30758768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 36881532 - 36881581
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||  ||||||||||||| |||||||||||| ||| ||||    
T  36881532 tactccctccggttctatttataagaaaaatttgactttttagatacatt 36881581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 42698213 - 42698164
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||||||    
T  42698213 tactccctccgatcatatttataaaaaaaatttgactttttagattcatt 42698164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 43714122 - 43714077
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||    
T  43714122 tactccctccggtcctatttataagaaatttttgactttttagatt 43714077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 5109359 - 5109411
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| |||||||| ||||||||||||| | || ||||||| ||||||||    
T  5109359 taatactctctccggtcctatttataagaaaaagttaactttttagattcatt 5109411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 10205070 - 10205026
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| || ||||||||||||| |||||||| ||||||||||||    
T  10205070 cctccgatcctatttataagaaatatttgactcttttgattcatt 10205026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 13775863 - 13775811
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||||||||||| | | |||||||||| ||| ||||    
T  13775863 taatactccctccggtcctatttataagagaaagttgactttttagatacatt 13775811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 585
Target Start/End: Original strand, 41492885 - 41492921
Alignment:
Q  549 attttaattaatactccctccggtcttatttataaga 585  Q
    |||||| |||||||||||||||||| |||||||||||    
T  41492885 attttatttaatactccctccggtcctatttataaga 41492921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 44737279 - 44737331
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||||||| |||| | | |||||||||| ||| ||||    
T  44737279 taatactccctccggtcttatttacaagagaaaattgactttttagatacatt 44737331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 16448786 - 16448837
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  16448786 aatacttcctccggtcctatttataagaaacatttgacttttttgattcatt 16448837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 8793871 - 8793819
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  8793871 taatactctctccggtcctatttataagaaatatttgacttttttgattcatt 8793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 42122963 - 42123014
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  42122963 aatactccctccagtcctatttataagaaacgtttgacttttttgattcatt 42123014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 3236479 - 3236430
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  3236479 tactccctccggtcatatttataagaaatatttgacttttttaattcatt 3236430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 609
Target Start/End: Complemental strand, 12958932 - 12958875
Alignment:
Q  552 ttaattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  12958932 ttaagtaatactccctccggtcctatatataagaaacaatttacttttttgattcatt 12958875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 5031616 - 5031564
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| || || || |||||||||||||||||||||||||||||||||||    
T  5031616 taatactctcttcgctcctatttataagaaacatttgacttttttgattcatt 5031564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 7693029 - 7693081
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||  || |||||||||||||||||| ||||||||||||||||    
T  7693029 taatactccctccaatcctatttataagaaacattttacttttttgattcatt 7693081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 607
Target Start/End: Complemental strand, 40651363 - 40651323
Alignment:
Q  567 tccggtcttatttataagaaacatttgacttttttgattca 607  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  40651363 tccggtcttatttataagaaatatttgacttttttgattca 40651323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 609
Target Start/End: Complemental strand, 6899574 - 6899519
Alignment:
Q  554 aattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  6899574 aattattactccctccggtcctatatataagaaacaatttacttttttgattcatt 6899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 609
Target Start/End: Original strand, 13013967 - 13014018
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  13013967 aatactccctccgatcctatttataagaaacattttacttttttaattcatt 13014018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 574 - 609
Target Start/End: Original strand, 32597511 - 32597546
Alignment:
Q  574 ttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||||||||    
T  32597511 ttatttataagaaacatttgacttttttgattcatt 32597546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 22429684 - 22429634
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  22429684 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 22429634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 605
Target Start/End: Original strand, 35149666 - 35149712
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||    
T  35149666 atactctccccggtcctatttataagaaacatttgacttttttgatt 35149712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 44796491 - 44796441
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  44796491 atactccctccggtcctatatataagaaacaatttacttttttgattcatt 44796441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 7693186 - 7693133
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| ||||||| ||||||||||||| | |||||||||| ||||||||    
T  7693186 ttaatactccttccggtcctatttataagaaaaaattgactttttagattcatt 7693133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 24618957 - 24619006
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||| ||| |||||||||||||| ||||||||||||||||||||    
T  24618957 tactacctccagtcctatttataagaaacctttgacttttttgattcatt 24619006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 36366024 - 36366073
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  36366024 tactccctccggtcctatatataagaaacaatttacttttttgattcatt 36366073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 1223119 - 1223171
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| ||||||||||||| |  ||||||||| ||||||||    
T  1223119 taatactccctccggtcatatttataagaaaaaagtgactttttagattcatt 1223171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 43332552 - 43332608
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| |||||||| ||||||| |||||||||||||  ||||||||||| ||||||||    
T  43332552 taataaatactccatccggtcctatttataagaaaattttgactttttagattcatt 43332608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 43932201 - 43932149
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||| |  |||||||||||| |||||||||| ||||||||    
T  43932201 taatactccctccggtccttattataagaaacaattgactttttagattcatt 43932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 609
Target Start/End: Original strand, 43932042 - 43932097
Alignment:
Q  554 aattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||| | ||||||    
T  43932042 aattaatactccctccggtccttattataagaaacaattgactttttaggttcatt 43932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 10839912 - 10839863
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| ||||||| |||||||||||||||||| || |||||||||||||    
T  10839912 atactccatccggtcctatttataagaaacatttaac-tttttgattcatt 10839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 608
Target Start/End: Original strand, 34745254 - 34745304
Alignment:
Q  558 aatactccctccggtcttatttataagaaacatttgacttttttgattcat 608  Q
    |||||||||||||||| |  |||||||||||| |||||||||||| |||||    
T  34745254 aatactccctccggtccttattataagaaacaattgacttttttggttcat 34745304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 8803381 - 8803328
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||| |||||| || ||||||||| ||| |||| ||||||||||||||||    
T  8803381 ttaatacttcctccgatcctatttataaaaaatatttaacttttttgattcatt 8803328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 533
Target Start/End: Complemental strand, 13085107 - 13085070
Alignment:
Q  496 aattgattcatttcgtttttcaatacaatattaattac 533  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  13085107 aattgattcatttcacttttcaatacaatattaattac 13085070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 40483282 - 40483331
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||| ||||||||| ||||||||||||| |||| |||||||| |||||||    
T  40483282 tactacctccggtcctatttataagaaatatttaacttttttaattcatt 40483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 43292566 - 43292615
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcat 608  Q
    ||||||||||||||| |  |||||||||||| |||||||||||| |||||    
T  43292566 atactccctccggtccttattataagaaacaattgacttttttggttcat 43292615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 43332710 - 43332661
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||| ||| ||||||||| ||| |||||| ||||||||||||||    
T  43332710 tactccctccagtcctatttataaaaaatatttgatttttttgattcatt 43332661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 6899416 - 6899468
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| ||||||||| ||||||||||||| |||| ||||||  ||||||||    
T  6899416 taatactacctccggtcctatttataagaaaaatttaacttttgagattcatt 6899468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 8453595 - 8453643
Alignment:
Q  561 actccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||| ||||||  |||||||| ||||||||||| ||||||||||||||    
T  8453595 actccatccggttctatttataggaaacatttgaattttttgattcatt 8453643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 24822875 - 24822827
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||| ||||||||||| ||||||||||||| | |||||||||| ||||    
T  24822875 taatattccctccggtcctatttataagaaaaaattgactttttagatt 24822827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 43135200 - 43135144
Alignment:
Q  553 taattaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||| ||||||||| |||||| |||| ||| |||||||||| ||| ||||    
T  43135200 taattaatacttcctccggtcctatttacaagagacagttgactttttagatacatt 43135144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 607
Target Start/End: Complemental strand, 45372855 - 45372807
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattca 607  Q
    ||||||||||||||| |  ||||||| |||| |||||||||||||||||    
T  45372855 atactccctccggtccttattataagtaacaattgacttttttgattca 45372807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 16679 - 16629
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  16679 atactccgttcggtcttatttataagaaacgtttgacttttttgattcatt 16629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 156767 - 156816
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  156767 tactccctccggtcctatttataagaaacatttaacttttttaattcatt 156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 3807 - 3857
Alignment:
Q  559 atactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||| |  |||||||||||| |||||||||||||||||||    
T  3807 atactccctccggtccttattataagaaacaattgacttttttgattcatt 3857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 605
Target Start/End: Complemental strand, 5339 - 5299
Alignment:
Q  565 cctccggtcttatttataagaaacatttgacttttttgatt 605  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  5339 cctccggtcctacttataagaaacatttgacttttttgatt 5299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 600
Target Start/End: Original strand, 3719 - 3762
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttt 600  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||    
T  3719 taatattccctccggtcttatatataagaaaaatttgacttttt 3762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.000000001; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 40344 - 40291
Alignment:
Q  556 ttaatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||| ||||||||    
T  40344 ttaatactccctccggtccttattataagaaacttttgactttttagattcatt 40291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 1684 - 1632
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||||||||||||||||| | || | ||||| ||||||||    
T  1684 taatactccctccggtcttatttataagaaaaaattaattttttagattcatt 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 1532 - 1578
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattc 606  Q
    |||| ||||||||| ||||||||  ||||||||||||||||||||||    
T  1532 tacttcctccggtcctatttatataaaacatttgacttttttgattc 1578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 601
Target Start/End: Original strand, 5271 - 5312
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgactttttt 601  Q
    ||||| ||| |||| |||||||||||||||||||||||||||    
T  5271 tactctctctggtcctatttataagaaacatttgactttttt 5312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 17384 - 17433
Alignment:
Q  560 tactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||||||||||  ||||||||||| ||||| ||||| ||||||||    
T  17384 tactccctccggtctttattataagaaacttttgattttttagattcatt 17433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 588
Target Start/End: Complemental strand, 31020 - 30984
Alignment:
Q  552 ttaattaatactccctccggtcttatttataagaaac 588  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  31020 ttaattactactccctccggtcttttttataagaaac 30984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 7276 - 7224
Alignment:
Q  557 taatactccctccggtcttatttataagaaacatttgacttttttgattcatt 609  Q
    ||||||||| |||| || ||| ||||||||||| || ||||||||||||||||    
T  7276 taatactccatccgatcctatatataagaaacaatttacttttttgattcatt 7224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University