View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14009_low_8 (Length: 443)
Name: NF14009_low_8
Description: NF14009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14009_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 27 - 425
Target Start/End: Complemental strand, 45406356 - 45405958
Alignment:
| Q |
27 |
ccgaaaacatacataaaggaattaaattatagttagaaccaattattgaaaagatttctgatatccacaatccaaattaggtccagtatccacattgaac |
126 |
Q |
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| T |
45406356 |
ccgaaaacatacataaaggaattaaattatagttagaaccaattattgaaaagatttctgatatccacaatccaaattaggtccagtatccacattgaac |
45406257 |
T |
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| Q |
127 |
aacttagtatatctttgaaaaaatccaattcgatcattcactcttgcatcattaggaattccacattccaatccaccattgactatatttgtcaccaatc |
226 |
Q |
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| T |
45406256 |
aacttagtatatctttgaaaaaatccaattcgatcattcactcttgcatcattaggaattccacattccaatccaccattgactatatttgtcaccaatc |
45406157 |
T |
|
| Q |
227 |
caaaaccagctgtgcgattagcagctatgtcagcttttgttgccaaatattttccaaccatcacattgtgacaagaaggtattggttttctctctgtcat |
326 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45406156 |
caaaaccagctgtgcgattagcagctatgtcagcttttgttgccaaatattttccaaccatcacattgtgacaagaaggtattggttttctctctgtcat |
45406057 |
T |
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| Q |
327 |
ccaaaaccatagagcagttttgaaagcaatcactgaattgtttgatacaatctctggattcctcagcccatcaaatcctaaggccttccctgctggtcc |
425 |
Q |
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| T |
45406056 |
ccaaaaccatagagcagttttgaaagcaatcactgaattgtttgatacaatctctggattcctcagcccatcaaatcctaaggccttccctgctggtcc |
45405958 |
T |
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