View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14010_high_2 (Length: 546)
Name: NF14010_high_2
Description: NF14010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14010_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 16 - 371
Target Start/End: Complemental strand, 2368058 - 2367704
Alignment:
| Q |
16 |
gtttccacgcaacaatatggaatatgtatccatgtcnnnnnnnnnnngagggaagaatatgtatctatgtctatatatttaattcttttttgcaagcata |
115 |
Q |
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| T |
2368058 |
gtttccacgcaacaatatggaatatgtatctatgtctttttttttt-gagggaagaatatgtatctatgtctatatatttaattcttttttgcaagcata |
2367960 |
T |
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| Q |
116 |
attggtatatttttatcttacatt-gaaacttaagactgttatattctgctttttgtaaaagatatcttnnnnnnnncataagagaatctatgttctaag |
214 |
Q |
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| T |
2367959 |
attggtatatttttatcttccatttgaaactta-gactgttatattctgctttttgcaaaagatatcttaaaaaaaacataagagaatctatgttctaag |
2367861 |
T |
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| Q |
215 |
gaaagtttttcttatagtgatatatgtgacatatttcacacatttattttccttcattgtgtgatcttatttggcatatttaatactggttatttattta |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2367860 |
gaaagtttttcttatagtgatatatgtgacatatttcacacatttattttccttcattgtgtgatcttatttggcatatttaatactggttatttattta |
2367761 |
T |
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| Q |
315 |
aataaagaaaagcatgcatgaatgggttagttgggttaattaccaaatctggttatt |
371 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2367760 |
aataaagaaaagcatgcatgaatgggttagttgggttaattaccaaatctggttatt |
2367704 |
T |
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