View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14010_high_9 (Length: 326)

Name: NF14010_high_9
Description: NF14010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14010_high_9
NF14010_high_9
[»] chr7 (9 HSPs)
chr7 (190-317)||(9428500-9428627)
chr7 (14-145)||(9428329-9428458)
chr7 (216-288)||(24614205-24614277)
chr7 (214-288)||(46022156-46022230)
chr7 (214-288)||(7701652-7701726)
chr7 (190-288)||(40417858-40417956)
chr7 (190-288)||(48062141-48062239)
chr7 (214-288)||(41189430-41189506)
chr7 (113-141)||(41893905-41893933)
[»] chr6 (9 HSPs)
chr6 (190-288)||(4820451-4820549)
chr6 (190-289)||(11612272-11612371)
chr6 (193-288)||(14818019-14818114)
chr6 (214-288)||(16199558-16199632)
chr6 (214-277)||(11014890-11014953)
chr6 (193-288)||(33603169-33603264)
chr6 (190-288)||(5694040-5694138)
chr6 (190-240)||(13689931-13689981)
chr6 (193-286)||(30423443-30423536)
[»] chr1 (10 HSPs)
chr1 (190-288)||(19947633-19947731)
chr1 (190-288)||(44519040-44519138)
chr1 (190-288)||(30570608-30570706)
chr1 (190-288)||(33100892-33100990)
chr1 (214-288)||(46907303-46907377)
chr1 (190-247)||(6693241-6693298)
chr1 (190-241)||(10627746-10627797)
chr1 (214-288)||(26207949-26208023)
chr1 (193-241)||(27533420-27533468)
chr1 (190-242)||(30735228-30735280)
[»] chr4 (17 HSPs)
chr4 (193-288)||(21777453-21777548)
chr4 (190-288)||(36177990-36178088)
chr4 (214-288)||(56363934-56364008)
chr4 (190-286)||(42395928-42396024)
chr4 (214-288)||(34616669-34616743)
chr4 (214-288)||(38382429-38382503)
chr4 (214-288)||(47181949-47182023)
chr4 (214-288)||(48402086-48402160)
chr4 (219-288)||(39195170-39195239)
chr4 (190-286)||(24575742-24575838)
chr4 (216-288)||(31641454-31641526)
chr4 (191-238)||(25221663-25221710)
chr4 (214-288)||(515534-515608)
chr4 (190-288)||(39440568-39440666)
chr4 (220-288)||(39606086-39606154)
chr4 (216-288)||(43175094-43175166)
chr4 (190-242)||(49449098-49449150)
[»] scaffold0087 (1 HSPs)
scaffold0087 (214-288)||(53250-53324)
[»] chr3 (11 HSPs)
chr3 (214-288)||(44383297-44383371)
chr3 (214-288)||(21217620-21217694)
chr3 (214-288)||(23592566-23592640)
chr3 (190-288)||(52326103-52326201)
chr3 (191-240)||(16969503-16969552)
chr3 (193-242)||(31157612-31157661)
chr3 (199-287)||(44463450-44463538)
chr3 (193-240)||(24256708-24256755)
chr3 (215-288)||(23600702-23600775)
chr3 (190-288)||(35376970-35377068)
chr3 (191-288)||(37503636-37503733)
[»] chr2 (5 HSPs)
chr2 (190-288)||(8848586-8848684)
chr2 (214-288)||(41056636-41056710)
chr2 (213-288)||(3097750-3097825)
chr2 (214-288)||(13333059-13333133)
chr2 (214-288)||(25270471-25270545)
[»] chr8 (3 HSPs)
chr8 (190-284)||(27854661-27854755)
chr8 (190-288)||(37449314-37449412)
chr8 (216-288)||(34639643-34639715)
[»] chr5 (3 HSPs)
chr5 (214-288)||(17626094-17626168)
chr5 (190-287)||(39054671-39054768)
chr5 (190-286)||(2972408-2972504)
[»] scaffold0148 (1 HSPs)
scaffold0148 (191-288)||(20790-20887)


Alignment Details
Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 9428500 - 9428627
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaactg 289  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||     
T  9428500 ctctattgttttaatttttatacaaatacctcattttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaactc 9428599  T
Q  290 atcacactgaaatagagaatatctcaac 317  Q
    ||||| | ||||||||||||||||||||    
T  9428600 atcacgccgaaatagagaatatctcaac 9428627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 9428329 - 9428458
Alignment:
Q  14 aatatatcaggttaacaacaataggttaacaccaaatcacgcctaattttaatttttccaactaatcccaaagaacccctnnnnnnnnctttcgttttat 113  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||| |||||    
T  9428329 aatatattaggttaacaacaatacgttaacaccaaatcacgcctaatcttaatttttccaactaatcccaaagaacccct-aaaaaaactttcg-tttat 9428426  T
Q  114 attattaaagagaaatgatatttgaacaacta 145  Q
    ||||||||||||||||||||||||||||||||    
T  9428427 attattaaagagaaatgatatttgaacaacta 9428458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 24614277 - 24614205
Alignment:
Q  216 tacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||| ||||||||||| ||||  ||| |||||||  || || ||||||||||||||||||||    
T  24614277 tacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaact 24614205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 46022230 - 46022156
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  46022230 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 46022156  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 7701652 - 7701726
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||| ||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  7701652 aatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 7701726  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 40417858 - 40417956
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||| |||||||   ||||||||| || |||| ||||||||||  | ||| ||| ||| || | |||||| |||||||||||||||||||    
T  40417858 ctctattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaact 40417956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 48062141 - 48062239
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||| ||||| |   |||||||||||| |||||||||||||||| | ||| |||  ||||||   |||   |||||||||||||||||||    
T  48062141 ctctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaact 48062239  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 41189506 - 41189430
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttat--catgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||||| ||||||||||| | ||  ||| |||||  ||| || || ||||||||||||||||||||    
T  41189506 aatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaact 41189430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 41893905 - 41893933
Alignment:
Q  113 tattattaaagagaaatgatatttgaaca 141  Q
    |||||||||||||||||||||||||||||    
T  41893905 tattattaaagagaaatgatatttgaaca 41893933  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 4820451 - 4820549
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||||||||| |   ||| |||||||| |||| ||||||||||| | ||| ||| |||||||||||||||  ||||||||||||||||||    
T  4820451 ctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaact 4820549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 11612272 - 11612371
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaactg 289  Q
    |||||||| ||| |||||| | |||||||||||||| |||| ||||||||||| ||||  |||  ||||||  || |||||| |||||||||||||||||    
T  11612272 ctctattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaactg 11612371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 14818019 - 14818114
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||| ||||| | | | ||||||||||||||| ||||||||||  | ||  ||| ||| |||| || |||||||||||||||||||||||    
T  14818019 tattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaact 14818114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 16199558 - 16199632
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  16199558 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 16199632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 11014953 - 11014890
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaa 277  Q
    |||||||||||| ||| |||||||||||| | ||| ||| |||||||| |||||| ||||||||    
T  11014953 aatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 33603264 - 33603169
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||| |||||||||| |   |||||||||||| |||| |||||||||||  |||| ||| ||| |||| |||||  ||||||||| |||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaact 33603169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 5694138 - 5694040
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||||||| |   ||||||||||||||||| |||||||| |  | ||| ||| ||| |||  || || |||||| |||||||||||||    
T  5694138 ctctattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaact 5694040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 13689981 - 13689931
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaatttt 240  Q
    |||||||| |||||||||| |   |||||||||||||||||||||||||||    
T  13689981 ctctattgctttgatttttgtgtcaatacctcatttcctttataaaatttt 13689931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 30423536 - 30423443
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaa 286  Q
    ||||| ||||| |||| ||  |||||||||||| |||||||||  ||||| | | | ||| |||||||  |||||| |||||||||||||||||    
T  30423536 tattgctttgaattttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 19947731 - 19947633
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||| ||||| | | |||||||| ||| |||||||||||||||  | ||| ||| ||| |||| ||||||||||||||||||||||||||    
T  19947731 ctctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaact 19947633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 44519138 - 44519040
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||||||||| | | ||||||||||||||||| ||||||||||  ||||  ||| ||| |||  || || ||||||||||||||||||||    
T  44519138 ctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaact 44519040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 30570608 - 30570706
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||||||| | | |||| |||  || |||| ||||||||||| | | | |||  ||||||| ||||| ||||||||||||||||||||    
T  30570608 ctctattgttttgatttttgtgctaatatctcgatttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 33100892 - 33100990
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||||||| |   | ||||||||||||||||||||||||||  | ||  ||| ||| |||  || || ||||||||||||||||||||    
T  33100892 ctctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 33100990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 46907303 - 46907377
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||| | ||| ||| ||| || | |||||  |||||||||||||||||||    
T  46907303 aatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaact 46907377  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 6693241 - 6693298
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatc 247  Q
    ||||||||||||| |||||||   ||||||||||||||||| ||||||||||| ||||    
T  6693241 ctctattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatc 6693298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 10627797 - 10627746
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttg 241  Q
    ||||||||||||||||||| ||  |||||| ||||| |||||||||||||||    
T  10627797 ctctattgttttgatttttgtatcaataccacattttctttataaaattttg 10627746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 26207949 - 26208023
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||| |||||| ||||  |||||||||| ||||  ||| ||||| || |||||| |||||||||||||||||||    
T  26207949 aatacatcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaact 26208023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 27533468 - 27533420
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaattttg 241  Q
    ||||||||||||||||||   |||||||||||| |||| ||||||||||    
T  27533468 tattgttttgatttttatgtcaatacctcattttctttgtaaaattttg 27533420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 30735280 - 30735228
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttga 242  Q
    ||||||||||||  ||||||| | | |||||||||| ||||||||||||||||    
T  30735280 ctctattgttttagtttttatgctactacctcatttactttataaaattttga 30735228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 21777453 - 21777548
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||| ||||||||||| ||  ||||| || ||| ||||||||||| |||| |||||||||  ||||||| ||||||| |||| |||||||||||||    
T  21777453 tattattttgatttttgtatcaatacatctttttctttataaaatcttgattatctaaaaaattatcatataaataattgtttaaataacacaact 21777548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 36177990 - 36178088
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||| ||||| ||| | |||||||||||||||||||||||||   | ||  ||| |||||||  || |||||||||||||||||||||||    
T  36177990 ctctattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaact 36178088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 56364008 - 56363934
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  56364008 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaact 56363934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 42396024 - 42395928
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaa 286  Q
    |||||||| |||||||||| | ||||||||||||||  ||| ||||| ||| | ||||| |||  ||||||| ||| || |||||||||||||||||    
T  42396024 ctctattgctttgatttttgtgcaaatacctcattttttttgtaaaactttaattatctcaaaaattatcatataagtagatgttcaaataacacaa 42395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 34616669 - 34616743
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||| ||||||| |||||||||||||||  | ||| ||| ||| |||| |||||| |||||||||||||||||||    
T  34616669 aatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaact 34616743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 38382429 - 38382503
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  38382429 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 38382503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 47181949 - 47182023
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  47181949 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 47182023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 48402160 - 48402086
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  48402160 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 48402086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 39195170 - 39195239
Alignment:
Q  219 ctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||| |||| ||||| ||||| ||||  ||||||| |||| |||||| |||||||||||||||||||    
T  39195170 ctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaact 39195239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 24575838 - 24575742
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaa 286  Q
    |||||||| |||| ||||| | | ||||||||||||||||||||||||||||  | ||  ||| ||| |||  || ||| |||||||||||||||||    
T  24575838 ctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 31641526 - 31641454
Alignment:
Q  216 tacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||| ||||||||||||||||||||  | ||  ||| ||||||| ||| || ||||||||||||||||||||    
T  31641526 taccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaact 31641454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 25221710 - 25221663
Alignment:
Q  191 tctattgttttgatttttatacaaatacctcatttcctttataaaatt 238  Q
    |||||||||||| ||||||||| ||||| || ||||||||||||||||    
T  25221710 tctattgttttggtttttataccaatacatcttttcctttataaaatt 25221663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 515608 - 515534
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||| ||||| ||||||||| || ||| ||| | ||| ||| |||| ||||||||| ||||||||||||||||    
T  515608 aataccacattttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaact 515534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 39440568 - 39440666
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||||||||| |   | ||||||||||||||| ||||||||||| | ||  ||| ||| |||  || || ||||||||||||||||||||    
T  39440568 ctctattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 39440666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 39606086 - 39606154
Alignment:
Q  220 tcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||||||||||  ||||  ||| ||| |||  || |||||||||||||||| ||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaact 39606154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 43175094 - 43175166
Alignment:
Q  216 tacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||||| ||||||||||| ||||  ||| ||| |||  || ||  |||||||||||||||||||    
T  43175094 tacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaact 43175166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 49449150 - 49449098
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttga 242  Q
    ||||||||||||| ||||| | | |||||||||||| |||| |||||||||||    
T  49449150 ctctattgttttggtttttgtgctaatacctcattttctttgtaaaattttga 49449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 53324 - 53250
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||| ||||||| ||||||||| |||||  | |||||||  ||||||| ||||||||||||||||||||||||||    
T  53324 aatatctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaact 53250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 44383297 - 44383371
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||| | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  44383297 aatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaact 44383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 21217620 - 21217694
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  21217620 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 21217694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 23592566 - 23592640
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  23592566 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 52326103 - 52326201
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||||| ||||| | ||  ||||||||||||||| ||||||||||| | ||  ||| ||| |||| || ||  |||||||||||||||||||    
T  52326103 ctctattgttttggtttttgtgcacttacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaact 52326201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 16969552 - 16969503
Alignment:
Q  191 tctattgttttgatttttatacaaatacctcatttcctttataaaatttt 240  Q
    |||||||||||||||||||| | | ||||||||||||||| |||||||||    
T  16969552 tctattgttttgatttttatgccactacctcatttcctttgtaaaatttt 16969503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 31157661 - 31157612
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaattttga 242  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  31157661 tattgttttgatttttgtaccaatacctaatttcctttgtaaaattttga 31157612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 44463450 - 44463538
Alignment:
Q  199 tttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaac 287  Q
    |||||||||| ||  |||| | ||||| |||| ||||||||||| ||||| ||| |||||||| ||| |  ||||||||||||||||||    
T  44463450 tttgatttttgtatcaatatcacattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacacaac 44463538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 24256755 - 24256708
Alignment:
Q  193 tattgttttgatttttatacaaatacctcatttcctttataaaatttt 240  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  24256755 tattgttttgatttttgtatcaatacctcatttcctttgtaaaatttt 24256708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 23600702 - 23600775
Alignment:
Q  215 atacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||| |||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  23600702 atacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 35377068 - 35376970
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||||||||| | | ||||| |||||| |||| ||||||||||  | ||  ||| ||| |||| |||||  |||||||||||||||||||    
T  35377068 ctctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaact 35376970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 37503733 - 37503636
Alignment:
Q  191 tctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||| |||||||||| |   |||| ||||||||||||  |||||||||  | ||  ||| |||||||  || |||||||||||||||||||||||    
T  37503733 tctattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaact 37503636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 8848684 - 8848586
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||||||||| ||| ||||| |||||| ||||  |||||||||| | ||  |||  ||||||| |||||| |||||||||||||||||||    
T  8848684 ctctattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaact 8848586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 41056710 - 41056636
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  41056710 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 3097825 - 3097750
Alignment:
Q  213 aaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||| ||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  3097825 aaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 3097750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 13333133 - 13333059
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||| |||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  13333133 aatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaact 13333059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 25270545 - 25270471
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | |||  || ||| |||| |||||  |||||||||||||||||||    
T  25270545 aatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaact 25270471  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 27854755 - 27854661
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacac 284  Q
    ||||||||||||||||||| | | ||||  | |||| |||| ||||||||| | | ||| ||| ||||||||| |||| ||||||||||||||||    
T  27854755 ctctattgttttgatttttgtgccaatatttaattttctttgtaaaattttaattgtcttaaaagttatcatgaaaatgaatgttcaaataacac 27854661  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 37449412 - 37449314
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||| |||| ||||| | | | ||||||||||||||| ||||||||||| ||||  ||| |||||||  || ||  || ||||||||||||||||    
T  37449412 ctctattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaact 37449314  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 34639643 - 34639715
Alignment:
Q  216 tacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||||||  ||| ||||||||||| | ||| |||  |||||||||||||  |||||||||||||| ||||    
T  34639643 tacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataact 34639715  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 17626094 - 17626168
Alignment:
Q  214 aatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    |||||||||||| |||||||||||||||  | ||| ||| ||| |||| |||||  |||||||||||||||||||    
T  17626094 aatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 17626168  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 39054671 - 39054768
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaac 287  Q
    |||||||| |||||||||| | ||||||  |||||| ||||  |||||||||| ||||  ||| ||| |||| |||||  ||||||||||||||||||    
T  39054671 ctctattgctttgatttttgtgcaaatatatcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 2972408 - 2972504
Alignment:
Q  190 ctctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaa 286  Q
    |||||||| |||||||||| |   ||||||||||||||||  | ||||||||| | ||  ||| ||| |||  || |||||||||||||||||||||    
T  2972408 ctctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 20887 - 20790
Alignment:
Q  191 tctattgttttgatttttatacaaatacctcatttcctttataaaattttgagtatctaaaatgttatcatgtaaataaatgttcaaataacacaact 288  Q
    ||||||| |||||||||| ||| ||||| | |||| | ||  |||||||||| ||||  |||  ||||||| |||||  |||||||||||||||||||    
T  20887 tctattgctttgatttttctaccaatacataattttccttgcaaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaact 20790  T

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