View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14011_high_3 (Length: 237)
Name: NF14011_high_3
Description: NF14011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14011_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 43995061 - 43995254
Alignment:
| Q |
1 |
aaaagaagaagagttgatacctggtcaagaagccattaatggaagtgaaagtgttgtagtagtattaaagaaggagagatctgagtgtgacgtgtgtacg |
100 |
Q |
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| T |
43995061 |
aaaagaagaagagttgatacctggtcaagaagccattaatggaagtgaaagtgttgttgtagtattaaagaaggagagatctgagtgtgacgtgtgtacg |
43995160 |
T |
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| Q |
101 |
ttttcttcttcactgcgttttgttttgttttcttctgtatatcttaacagagagagaaagagctaacactaaacagtactagtagagagatagatagcg |
199 |
Q |
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|||||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
43995161 |
ttttcttcttcactgcgttttgttttatt-----ctgtatatctgaacagagagagaaagatctaacactaaacagtactagtagagagatagatagcg |
43995254 |
T |
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