View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14012_high_5 (Length: 237)
Name: NF14012_high_5
Description: NF14012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14012_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 29386347 - 29386538
Alignment:
| Q |
1 |
tgtttgtaacttataaggattattaagttttattttccttgttaagaataaaaatatatgaatgaatnnnnnnnnnttctaatctatactttcctcattg |
100 |
Q |
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| T |
29386347 |
tgtttataacttataaggattattaagttttattttccttgttaagaataaaaatatatgaatgaataaaaaaaa-ttctaatctatacttttctcattg |
29386445 |
T |
|
| Q |
101 |
tatatatata------gagagcatgtcctttgtttaagaatacattgtatttgctaactagtacctcgatcagcttcatattttaagacgatt |
187 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
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| T |
29386446 |
tatatatatatagagagagagcatgtcctttgtttaagaatacattgtatttgctaattagtacctcgatcggcttcatattttaagacgatt |
29386538 |
T |
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