View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14014_high_6 (Length: 447)

Name: NF14014_high_6
Description: NF14014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14014_high_6
NF14014_high_6
[»] chr7 (99 HSPs)
chr7 (1-433)||(10937353-10937786)
chr7 (246-420)||(9500440-9500616)
chr7 (246-420)||(9864253-9864429)
chr7 (243-421)||(18465998-18466177)
chr7 (238-365)||(18449230-18449357)
chr7 (233-389)||(9916549-9916707)
chr7 (233-389)||(9924461-9924619)
chr7 (233-407)||(5047328-5047502)
chr7 (246-421)||(16306690-16306867)
chr7 (249-348)||(8054062-8054158)
chr7 (246-322)||(7318269-7318345)
chr7 (246-433)||(5797507-5797695)
chr7 (244-369)||(23093304-23093428)
chr7 (246-335)||(23099966-23100055)
chr7 (252-348)||(8979007-8979103)
chr7 (246-322)||(10587051-10587127)
chr7 (246-348)||(10584487-10584589)
chr7 (246-348)||(16297821-16297923)
chr7 (250-348)||(18662441-18662539)
chr7 (248-321)||(31492928-31493001)
chr7 (252-348)||(16365707-16365803)
chr7 (246-388)||(21885116-21885255)
chr7 (246-333)||(3329674-3329761)
chr7 (246-348)||(3734592-3734694)
chr7 (246-348)||(9731628-9731730)
chr7 (231-365)||(33035454-33035587)
chr7 (240-369)||(12391175-12391304)
chr7 (248-421)||(21912406-21912581)
chr7 (242-347)||(26134750-26134854)
chr7 (250-322)||(2563818-2563889)
chr7 (252-348)||(13759861-13759957)
chr7 (246-321)||(2350775-2350850)
chr7 (249-348)||(8054490-8054589)
chr7 (246-322)||(4986551-4986627)
chr7 (246-322)||(4990649-4990725)
chr7 (246-407)||(5530017-5530179)
chr7 (250-322)||(11221191-11221263)
chr7 (246-314)||(15869591-15869659)
chr7 (245-348)||(4785832-4785934)
chr7 (245-348)||(4818832-4818934)
chr7 (246-321)||(7397192-7397266)
chr7 (249-348)||(18368981-18369080)
chr7 (246-395)||(1872781-1872933)
chr7 (249-335)||(5108565-5108650)
chr7 (252-322)||(17153181-17153251)
chr7 (244-365)||(15303605-15303725)
chr7 (327-421)||(16224063-16224159)
chr7 (246-322)||(9574403-9574479)
chr7 (246-322)||(12181604-12181680)
chr7 (249-348)||(11803080-11803178)
chr7 (246-321)||(12329678-12329753)
chr7 (246-348)||(6013589-6013691)
chr7 (256-322)||(8313422-8313488)
chr7 (246-348)||(9245177-9245279)
chr7 (232-320)||(21227160-21227249)
chr7 (246-322)||(1584541-1584615)
chr7 (249-348)||(1848228-1848325)
chr7 (250-314)||(18661590-18661654)
chr7 (233-348)||(1587665-1587779)
chr7 (253-348)||(7492264-7492358)
chr7 (249-322)||(20582258-20582328)
chr7 (246-356)||(22339304-22339417)
chr7 (246-348)||(6042457-6042558)
chr7 (238-304)||(9890171-9890237)
chr7 (232-330)||(12407280-12407378)
chr7 (246-348)||(14195974-14196075)
chr7 (243-361)||(9720957-9721067)
chr7 (243-348)||(9866542-9866646)
chr7 (233-322)||(14755157-14755245)
chr7 (273-322)||(18467474-18467523)
chr7 (261-322)||(39273202-39273263)
chr7 (246-322)||(9261200-9261276)
chr7 (260-348)||(10648588-10648676)
chr7 (246-322)||(21230308-21230384)
chr7 (247-306)||(4579095-4579153)
chr7 (246-322)||(9130902-9130979)
chr7 (246-289)||(19153294-19153337)
chr7 (246-289)||(20752693-20752736)
chr7 (246-348)||(6005833-6005934)
chr7 (249-322)||(13418533-13418606)
chr7 (246-348)||(17077124-17077226)
chr7 (233-395)||(18495357-18495517)
chr7 (270-315)||(8877441-8877486)
chr7 (268-325)||(21102317-21102374)
chr7 (246-369)||(1882365-1882488)
chr7 (358-421)||(36117474-36117537)
chr7 (246-288)||(1814111-1814153)
chr7 (272-322)||(13277525-13277575)
chr7 (244-349)||(7782555-7782659)
chr7 (233-362)||(17203008-17203135)
chr7 (261-325)||(2504181-2504244)
chr7 (244-324)||(4258911-4258990)
chr7 (272-322)||(16059048-16059099)
chr7 (275-365)||(8938223-8938313)
chr7 (242-320)||(20174564-20174641)
chr7 (242-355)||(2453725-2453837)
chr7 (272-317)||(4449002-4449047)
chr7 (244-320)||(7748115-7748189)
chr7 (385-421)||(14755060-14755096)
[»] chr8 (45 HSPs)
chr8 (242-433)||(14075586-14075779)
chr8 (233-430)||(5850925-5851121)
chr8 (247-420)||(24904630-24904805)
chr8 (246-348)||(29382362-29382464)
chr8 (246-420)||(15238795-15238971)
chr8 (238-404)||(31288346-31288512)
chr8 (246-348)||(14528145-14528247)
chr8 (246-348)||(24269594-24269695)
chr8 (252-348)||(13314993-13315089)
chr8 (252-333)||(17101909-17101990)
chr8 (246-389)||(17976615-17976758)
chr8 (246-322)||(24114309-24114385)
chr8 (246-416)||(5052856-5053024)
chr8 (255-318)||(30783772-30783835)
chr8 (255-322)||(2637603-2637670)
chr8 (238-365)||(15292719-15292845)
chr8 (238-365)||(15473088-15473214)
chr8 (233-348)||(24119770-24119884)
chr8 (238-317)||(26008011-26008090)
chr8 (251-345)||(26615246-26615339)
chr8 (246-348)||(30122156-30122257)
chr8 (246-348)||(34497111-34497213)
chr8 (256-322)||(44011051-44011116)
chr8 (246-322)||(6884954-6885029)
chr8 (249-348)||(17509246-17509344)
chr8 (246-348)||(30806493-30806600)
chr8 (233-322)||(19786715-19786803)
chr8 (238-304)||(17969402-17969468)
chr8 (250-308)||(24110696-24110754)
chr8 (250-348)||(24644838-24644935)
chr8 (246-292)||(30235373-30235419)
chr8 (246-322)||(25182455-25182531)
chr8 (231-306)||(28276801-28276874)
chr8 (260-322)||(27659455-27659517)
chr8 (243-316)||(14006088-14006161)
chr8 (249-310)||(24723480-24723540)
chr8 (252-348)||(18448543-18448639)
chr8 (268-348)||(21314641-21314721)
chr8 (251-303)||(25226137-25226189)
chr8 (246-284)||(13697858-13697896)
chr8 (244-317)||(17972166-17972237)
chr8 (246-322)||(14628372-14628448)
chr8 (267-355)||(28317431-28317518)
chr8 (238-285)||(12268185-12268232)
chr8 (272-316)||(19264064-19264108)
[»] chr6 (63 HSPs)
chr6 (233-433)||(28585945-28586146)
chr6 (238-421)||(28589353-28589541)
chr6 (233-433)||(9726006-9726207)
chr6 (246-369)||(17729148-17729271)
chr6 (250-348)||(12183332-12183430)
chr6 (252-348)||(27124493-27124589)
chr6 (238-368)||(9385943-9386072)
chr6 (251-348)||(9516786-9516883)
chr6 (246-347)||(25927305-25927406)
chr6 (246-322)||(21907428-21907504)
chr6 (232-348)||(22567823-22567938)
chr6 (266-348)||(22410328-22410410)
chr6 (246-348)||(23143718-23143820)
chr6 (246-335)||(21672449-21672538)
chr6 (255-365)||(23645751-23645861)
chr6 (246-348)||(27737690-27737792)
chr6 (246-335)||(21679865-21679954)
chr6 (246-322)||(11176946-11177022)
chr6 (249-348)||(17827093-17827192)
chr6 (251-322)||(20005906-20005977)
chr6 (225-347)||(7542962-7543083)
chr6 (246-348)||(8241273-8241373)
chr6 (246-321)||(18075416-18075491)
chr6 (239-349)||(26215387-26215495)
chr6 (233-317)||(20722209-20722291)
chr6 (246-302)||(14079491-14079547)
chr6 (252-348)||(23844466-23844562)
chr6 (246-301)||(21932100-21932155)
chr6 (246-348)||(4339731-4339833)
chr6 (246-348)||(21688796-21688898)
chr6 (246-299)||(5624636-5624689)
chr6 (246-298)||(2586717-2586769)
chr6 (246-322)||(15466366-15466441)
chr6 (246-322)||(28933687-28933763)
chr6 (233-365)||(34478508-34478639)
chr6 (246-348)||(9898959-9899062)
chr6 (242-349)||(33655901-33656006)
chr6 (255-321)||(17299859-17299925)
chr6 (246-303)||(20145106-20145163)
chr6 (246-303)||(22187676-22187733)
chr6 (318-433)||(24188146-24188263)
chr6 (249-321)||(17382144-17382216)
chr6 (246-322)||(19244581-19244657)
chr6 (255-318)||(22566193-22566256)
chr6 (246-303)||(8039178-8039234)
chr6 (276-369)||(9386070-9386162)
chr6 (247-291)||(20002440-20002484)
chr6 (232-320)||(31629142-31629230)
chr6 (274-317)||(9838380-9838423)
chr6 (265-348)||(23231984-23232067)
chr6 (294-369)||(24252209-24252284)
chr6 (250-319)||(24251516-24251585)
chr6 (272-316)||(22413082-22413126)
chr6 (252-288)||(34092327-34092363)
chr6 (272-322)||(23009421-23009471)
chr6 (272-322)||(23778893-23778943)
chr6 (266-322)||(6630719-6630773)
chr6 (238-315)||(15614218-15614294)
chr6 (246-335)||(17883799-17883887)
chr6 (249-322)||(21841715-21841788)
chr6 (251-348)||(25781796-25781888)
chr6 (272-316)||(24657488-24657532)
chr6 (252-292)||(26587622-26587662)
[»] chr4 (62 HSPs)
chr4 (243-433)||(19900573-19900763)
chr4 (246-433)||(9052670-9052859)
chr4 (238-405)||(11093952-11094119)
chr4 (252-395)||(11521145-11521288)
chr4 (240-433)||(1833511-1833702)
chr4 (246-348)||(13692670-13692772)
chr4 (250-348)||(13908854-13908952)
chr4 (251-348)||(19492701-19492798)
chr4 (246-322)||(14648891-14648966)
chr4 (246-322)||(17671998-17672074)
chr4 (233-365)||(19882624-19882755)
chr4 (246-433)||(11700488-11700672)
chr4 (233-364)||(21323860-21323990)
chr4 (249-346)||(17216816-17216913)
chr4 (246-321)||(12578294-12578369)
chr4 (247-322)||(19929702-19929777)
chr4 (233-348)||(25121227-25121340)
chr4 (246-348)||(11490528-11490630)
chr4 (246-356)||(12839773-12839883)
chr4 (246-348)||(13128875-13128977)
chr4 (250-348)||(19562179-19562277)
chr4 (228-369)||(20317758-20317898)
chr4 (252-348)||(7582299-7582395)
chr4 (255-433)||(22526369-22526549)
chr4 (233-322)||(9737531-9737624)
chr4 (246-348)||(19092291-19092393)
chr4 (250-348)||(20315000-20315098)
chr4 (246-348)||(20829740-20829841)
chr4 (252-321)||(13992904-13992973)
chr4 (246-322)||(15047124-15047200)
chr4 (246-322)||(15107224-15107300)
chr4 (246-349)||(22357532-22357638)
chr4 (246-348)||(5679201-5679303)
chr4 (250-316)||(17709757-17709823)
chr4 (232-306)||(17951339-17951412)
chr4 (232-306)||(17955191-17955264)
chr4 (247-306)||(22176005-22176064)
chr4 (234-325)||(22345005-22345095)
chr4 (275-365)||(7611266-7611356)
chr4 (246-348)||(11933415-11933516)
chr4 (246-348)||(40227773-40227873)
chr4 (251-348)||(15164768-15164865)
chr4 (268-321)||(24639482-24639535)
chr4 (246-347)||(3774821-3774923)
chr4 (233-361)||(15050071-15050198)
chr4 (233-361)||(15104226-15104353)
chr4 (252-348)||(19636587-19636682)
chr4 (252-348)||(23080343-23080439)
chr4 (238-320)||(10106999-10107080)
chr4 (243-361)||(13587224-13587334)
chr4 (247-356)||(25643460-25643568)
chr4 (246-298)||(12318429-12318481)
chr4 (252-321)||(19374841-19374909)
chr4 (251-348)||(26115905-26116001)
chr4 (249-348)||(16730400-16730499)
chr4 (256-322)||(43941814-43941880)
chr4 (243-306)||(22218644-22218706)
chr4 (273-310)||(12761272-12761309)
chr4 (272-316)||(25097856-25097901)
chr4 (268-320)||(10589730-10589781)
chr4 (228-292)||(13787194-13787257)
chr4 (268-348)||(17337136-17337216)
[»] chr2 (49 HSPs)
chr2 (238-401)||(8503015-8503181)
chr2 (238-407)||(25939146-25939317)
chr2 (246-348)||(29719232-29719334)
chr2 (249-348)||(27909120-27909219)
chr2 (246-324)||(25888245-25888323)
chr2 (232-348)||(17743477-17743592)
chr2 (246-348)||(20174636-20174738)
chr2 (233-349)||(8447050-8447165)
chr2 (246-348)||(19200136-19200237)
chr2 (246-322)||(15339234-15339310)
chr2 (246-322)||(32085459-32085535)
chr2 (254-433)||(28770357-28770538)
chr2 (238-325)||(12557733-12557819)
chr2 (249-348)||(25196010-25196108)
chr2 (246-348)||(12953295-12953397)
chr2 (227-348)||(45621882-45622002)
chr2 (246-322)||(25618553-25618628)
chr2 (241-356)||(25070119-25070233)
chr2 (246-321)||(45553126-45553201)
chr2 (246-348)||(26603351-26603453)
chr2 (233-369)||(32439977-32440112)
chr2 (273-356)||(27418389-27418472)
chr2 (246-348)||(17349354-17349454)
chr2 (251-348)||(11382754-11382851)
chr2 (246-322)||(25885487-25885562)
chr2 (246-322)||(31804927-31805003)
chr2 (249-336)||(28925521-28925607)
chr2 (251-322)||(30411679-30411750)
chr2 (246-348)||(5777213-5777314)
chr2 (246-348)||(5792825-5792926)
chr2 (238-356)||(18553900-18554017)
chr2 (247-321)||(23011791-23011864)
chr2 (256-417)||(30900778-30900937)
chr2 (249-322)||(25530445-25530519)
chr2 (246-348)||(13776335-13776436)
chr2 (272-322)||(25535296-25535346)
chr2 (249-322)||(17635802-17635875)
chr2 (260-407)||(9239156-9239301)
chr2 (272-348)||(24090927-24091003)
chr2 (251-334)||(17889938-17890020)
chr2 (245-355)||(29883219-29883333)
chr2 (268-321)||(9774363-9774414)
chr2 (262-348)||(29142973-29143059)
chr2 (249-322)||(17675657-17675730)
chr2 (358-405)||(19287438-19287485)
chr2 (246-299)||(20173348-20173400)
chr2 (287-348)||(25920303-25920364)
chr2 (233-310)||(25936905-25936981)
chr2 (261-321)||(29027507-29027567)
[»] chr3 (55 HSPs)
chr3 (246-407)||(10917914-10918077)
chr3 (238-365)||(12759375-12759502)
chr3 (257-421)||(821439-821606)
chr3 (233-348)||(12805891-12806005)
chr3 (246-348)||(21301914-21302016)
chr3 (238-356)||(28728932-28729050)
chr3 (251-348)||(22349410-22349507)
chr3 (246-420)||(6289899-6290073)
chr3 (267-405)||(8557072-8557211)
chr3 (246-348)||(2167618-2167719)
chr3 (246-348)||(3116420-3116521)
chr3 (246-348)||(10744898-10745000)
chr3 (246-348)||(16245730-16245832)
chr3 (233-433)||(7147972-7148172)
chr3 (248-348)||(12411149-12411249)
chr3 (252-348)||(17438432-17438527)
chr3 (246-322)||(21325336-21325412)
chr3 (250-337)||(19908307-19908394)
chr3 (249-347)||(4650231-4650328)
chr3 (339-430)||(20397674-20397767)
chr3 (246-348)||(21825870-21825971)
chr3 (246-322)||(5508332-5508407)
chr3 (249-317)||(8770019-8770086)
chr3 (233-348)||(20429694-20429808)
chr3 (246-348)||(8319036-8319137)
chr3 (253-323)||(10923150-10923220)
chr3 (246-308)||(18458465-18458527)
chr3 (246-348)||(19171835-19171937)
chr3 (250-348)||(21303355-21303453)
chr3 (246-348)||(41508363-41508465)
chr3 (249-317)||(8765117-8765184)
chr3 (249-348)||(932742-932840)
chr3 (242-369)||(21019577-21019702)
chr3 (238-316)||(27542948-27543025)
chr3 (246-323)||(13908252-13908328)
chr3 (242-355)||(20339758-20339870)
chr3 (272-348)||(8889153-8889229)
chr3 (246-322)||(18736699-18736774)
chr3 (244-320)||(21083305-21083380)
chr3 (242-365)||(21074522-21074644)
chr3 (246-348)||(8143611-8143711)
chr3 (250-308)||(11518002-11518060)
chr3 (238-308)||(25756663-25756733)
chr3 (246-316)||(31286048-31286117)
chr3 (271-348)||(19925624-19925701)
chr3 (248-348)||(7478336-7478431)
chr3 (251-307)||(11533017-11533073)
chr3 (239-314)||(19706831-19706905)
chr3 (238-317)||(23056203-23056281)
chr3 (244-285)||(12752201-12752242)
chr3 (246-277)||(22245346-22245377)
chr3 (244-299)||(51119293-51119347)
chr3 (246-320)||(20397543-20397616)
chr3 (273-322)||(8445846-8445894)
chr3 (272-317)||(16229974-16230019)
[»] chr1 (55 HSPs)
chr1 (251-348)||(17610257-17610354)
chr1 (233-420)||(17837501-17837687)
chr1 (238-407)||(24306245-24306415)
chr1 (248-348)||(21449087-21449187)
chr1 (249-348)||(25405631-25405730)
chr1 (246-417)||(24267712-24267885)
chr1 (249-349)||(13345336-13345436)
chr1 (246-346)||(21847630-21847729)
chr1 (246-322)||(23038039-23038114)
chr1 (233-333)||(27117734-27117833)
chr1 (249-348)||(12208600-12208699)
chr1 (249-348)||(18736241-18736340)
chr1 (238-314)||(26540884-26540959)
chr1 (246-348)||(3591654-3591756)
chr1 (249-348)||(15543967-15544066)
chr1 (246-321)||(24281273-24281348)
chr1 (249-348)||(29242518-29242617)
chr1 (246-348)||(17359158-17359260)
chr1 (246-323)||(16359867-16359943)
chr1 (246-322)||(9787906-9787982)
chr1 (264-348)||(21666609-21666693)
chr1 (246-321)||(12012828-12012903)
chr1 (227-322)||(14779543-14779637)
chr1 (246-368)||(16787707-16787829)
chr1 (231-365)||(33712645-33712778)
chr1 (246-307)||(22664202-22664263)
chr1 (246-321)||(51473904-51473977)
chr1 (243-361)||(25958102-25958219)
chr1 (246-300)||(32383047-32383101)
chr1 (253-348)||(9401511-9401603)
chr1 (231-320)||(15813184-15813271)
chr1 (249-317)||(18825655-18825722)
chr1 (249-305)||(21988026-21988082)
chr1 (246-322)||(44795365-44795440)
chr1 (246-348)||(15813525-15813628)
chr1 (253-348)||(16179010-16179105)
chr1 (249-348)||(21334720-21334819)
chr1 (321-430)||(6501470-6501580)
chr1 (264-322)||(24214558-24214616)
chr1 (229-323)||(33190657-33190750)
chr1 (246-322)||(147627-147703)
chr1 (246-322)||(26648998-26649073)
chr1 (249-322)||(16069578-16069650)
chr1 (246-365)||(22620258-22620377)
chr1 (276-355)||(24306950-24307028)
chr1 (246-292)||(34480965-34481011)
chr1 (251-356)||(10064564-10064668)
chr1 (246-303)||(28008101-28008158)
chr1 (252-321)||(31236076-31236145)
chr1 (249-348)||(18830481-18830579)
chr1 (251-322)||(22622892-22622962)
chr1 (272-314)||(727489-727531)
chr1 (267-348)||(16916934-16917016)
chr1 (250-310)||(15808046-15808106)
chr1 (246-306)||(17121523-17121582)
[»] chr5 (51 HSPs)
chr5 (246-420)||(24852098-24852275)
chr5 (252-420)||(19086105-19086276)
chr5 (241-353)||(17185454-17185566)
chr5 (231-417)||(15544032-15544218)
chr5 (233-348)||(18208250-18208363)
chr5 (249-348)||(19004227-19004326)
chr5 (246-322)||(15469932-15470008)
chr5 (238-421)||(29263508-29263691)
chr5 (238-348)||(15375883-15375993)
chr5 (230-324)||(23380282-23380376)
chr5 (246-348)||(25550505-25550607)
chr5 (231-348)||(18937730-18937845)
chr5 (246-322)||(17171580-17171656)
chr5 (251-348)||(17431884-17431981)
chr5 (246-314)||(24266990-24267057)
chr5 (246-314)||(24343621-24343688)
chr5 (249-348)||(20315431-20315529)
chr5 (246-348)||(22755517-22755619)
chr5 (272-361)||(23265176-23265265)
chr5 (251-348)||(24245545-24245642)
chr5 (246-322)||(25402364-25402440)
chr5 (233-365)||(28253264-28253395)
chr5 (252-348)||(34487640-34487735)
chr5 (251-322)||(23388865-23388935)
chr5 (249-348)||(24140442-24140540)
chr5 (246-348)||(15690774-15690875)
chr5 (251-348)||(39434464-39434560)
chr5 (239-314)||(26307593-26307666)
chr5 (267-322)||(17315127-17315182)
chr5 (246-365)||(26120861-26120979)
chr5 (251-322)||(36175135-36175205)
chr5 (233-283)||(17769461-17769511)
chr5 (233-420)||(28142347-28142537)
chr5 (233-323)||(32417382-32417471)
chr5 (246-323)||(26121350-26121426)
chr5 (249-322)||(34128636-34128708)
chr5 (246-322)||(24167611-24167687)
chr5 (246-289)||(20419952-20419995)
chr5 (246-308)||(19283896-19283958)
chr5 (252-305)||(19051551-19051604)
chr5 (244-349)||(23014610-23014713)
chr5 (233-349)||(27921402-27921516)
chr5 (249-288)||(20744872-20744911)
chr5 (246-287)||(24662212-24662253)
chr5 (246-323)||(26110488-26110564)
chr5 (268-317)||(26502137-26502185)
chr5 (261-365)||(32581898-32582001)
chr5 (300-402)||(32452388-32452491)
chr5 (272-316)||(20564113-20564158)
chr5 (246-363)||(24656839-24656956)
chr5 (272-348)||(28664796-28664872)
[»] scaffold0650 (1 HSPs)
scaffold0650 (246-348)||(6283-6385)
[»] scaffold0136 (1 HSPs)
scaffold0136 (246-348)||(15467-15568)
[»] scaffold0019 (2 HSPs)
scaffold0019 (242-389)||(11232-11380)
scaffold0019 (251-321)||(181734-181803)
[»] scaffold0005 (1 HSPs)
scaffold0005 (246-322)||(168326-168401)
[»] scaffold0672 (1 HSPs)
scaffold0672 (232-420)||(1717-1905)
[»] scaffold0008 (3 HSPs)
scaffold0008 (232-321)||(54843-54931)
scaffold0008 (249-304)||(48235-48290)
scaffold0008 (271-322)||(234362-234413)
[»] scaffold0622 (1 HSPs)
scaffold0622 (246-322)||(724-800)
[»] scaffold0035 (1 HSPs)
scaffold0035 (248-348)||(69911-70011)
[»] scaffold0048 (1 HSPs)
scaffold0048 (246-369)||(78590-78713)
[»] scaffold0016 (2 HSPs)
scaffold0016 (230-324)||(12089-12183)
scaffold0016 (251-322)||(3533-3603)
[»] scaffold0838 (1 HSPs)
scaffold0838 (251-315)||(2371-2435)
[»] scaffold0832 (1 HSPs)
scaffold0832 (251-315)||(2402-2466)
[»] scaffold0155 (1 HSPs)
scaffold0155 (246-348)||(35996-36098)
[»] scaffold0042 (1 HSPs)
scaffold0042 (252-348)||(29909-30004)
[»] scaffold0024 (1 HSPs)
scaffold0024 (246-321)||(39580-39655)
[»] scaffold0653 (1 HSPs)
scaffold0653 (246-348)||(4484-4586)
[»] scaffold0102 (1 HSPs)
scaffold0102 (262-348)||(35549-35635)
[»] scaffold0957 (1 HSPs)
scaffold0957 (246-323)||(3149-3225)
[»] scaffold0638 (1 HSPs)
scaffold0638 (252-348)||(824-919)
[»] scaffold0001 (2 HSPs)
scaffold0001 (246-322)||(81483-81558)
scaffold0001 (246-317)||(69078-69148)
[»] scaffold1869 (1 HSPs)
scaffold1869 (250-335)||(403-488)
[»] scaffold0056 (1 HSPs)
scaffold0056 (250-322)||(21277-21348)
[»] scaffold0043 (1 HSPs)
scaffold0043 (246-322)||(89881-89956)
[»] scaffold0238 (1 HSPs)
scaffold0238 (246-421)||(19107-19284)
[»] scaffold0062 (1 HSPs)
scaffold0062 (272-322)||(43254-43304)
[»] scaffold0394 (1 HSPs)
scaffold0394 (233-365)||(13889-14023)
[»] scaffold0090 (1 HSPs)
scaffold0090 (246-321)||(7440-7515)
[»] scaffold0063 (1 HSPs)
scaffold0063 (246-289)||(51119-51162)
[»] scaffold0054 (1 HSPs)
scaffold0054 (252-303)||(72074-72125)
[»] scaffold0006 (3 HSPs)
scaffold0006 (246-310)||(18783-18848)
scaffold0006 (371-421)||(18665-18715)
scaffold0006 (246-310)||(223068-223133)
[»] scaffold0620 (1 HSPs)
scaffold0620 (252-288)||(7661-7697)
[»] scaffold0606 (1 HSPs)
scaffold0606 (233-284)||(7859-7910)


Alignment Details
Target: chr7 (Bit Score: 394; Significance: 0; HSPs: 99)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 1 - 433
Target Start/End: Original strand, 10937353 - 10937786
Alignment:
Q  1 tcaatcagacaaacattgtttccaactcttattcgatgcatcaattaatgcatgcaccataaattttcaaacaaaatgtgtttgtggtatattatcatcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10937353 tcaatcagacaaacattgtttccaactcttattcgatgcatcaattaatgcatgcaccataaattttcaaacaaaatgtgtttgtggtatattatcatcg 10937452  T
Q  101 atacatctaccatttaggagccatggttcatcaagaatagggatggaggacccatagccaatacaccaccgtgcaccacccctagcaatgaaatgggcat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10937453 atacatctaccatttaggagccatggttcatcaagaatagggatggaggacccatagccaatacaccaccgtgcaccacccctaacaatgaaatgggcat 10937552  T
Q  201 gcaaaatacttcttcaaacataactaggattattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcg 300  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10937553 gcaaaatacttcttcaaacataactaggattattgatggttggatttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcg 10937652  T
Q  301 tatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaac-aaaataaataaagataacggtttagagttttgtaatttaatt 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  10937653 tatccacatggattgtcgtttcaatcaaacaattcacattacttatttgagaacaacaaaaataaataaagataagggtttagagttttgtaatttaatt 10937752  T
Q  400 tgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    |||||||||||||||||||||| |||||||||||    
T  10937753 tgtttgcagcagagcaaagtttatctgttttgat 10937786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 246 - 420
Target Start/End: Original strand, 9500440 - 9500616
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| | || ||||||||||||||| ||||||| |||||    ||||||||| |||||||||    
T  9500440 ttaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattactta 9500539  T
Q  346 tttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||  |||||||| | |||||| ||||||||||||    
T  9500540 tttaggaacaataaaataaataaagagataagggtttagagtttttcaatttaatctatttgcaacagagcaaagtt 9500616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 420
Target Start/End: Complemental strand, 9864429 - 9864253
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||    ||||||||  | |||||||    
T  9864429 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttactta 9864330  T
Q  346 tttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    |||  |||||| |||||| ||||  |||||| |||||||||||||| |||||| | |||||||| || |||||||||    
T  9864329 tttgagaacaataaaatatataaagagataagggtttagagttttgcaatttactctgtttgcaacaaagcaaagtt 9864253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 243 - 421
Target Start/End: Original strand, 18465998 - 18466177
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    ||||||||||||  ||||||||| |||| ||| ||||||||||||||||| |||| |||||||| | ||||| ||||||||  |||||||||    ||||    
T  18465998 gatttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttac 18466097  T
Q  343 ttatttaggaacaacaaaataaataaa-gataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    |||||| ||||||| |||||||||||| ||||| |||||||||||||| |||||||||| |||||| |||| ||||||||    
T  18466098 ttatttgggaacaataaaataaataaaggataagggtttagagttttgcaatttaatttatttgcaacagatcaaagttt 18466177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 238 - 365
Target Start/End: Original strand, 18449230 - 18449357
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||  |||||||||  |    
T  18449230 ggtcggatttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaattggc 18449329  T
Q  338 attacttatttaggaacaacaaaataaa 365  Q
     |||||||||| ||||||| ||||||||    
T  18449330 gttacttatttgggaacaataaaataaa 18449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 389
Target Start/End: Original strand, 9916549 - 9916707
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| |||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  9916549 ttgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaa 9916648  T
Q  333 ttcacattacttatttaggaacaa-caaaataaat-aaagataacggtttagagttttg 389  Q
    |     |||||||||| |||||||  ||||||||| |||||||||| ||||||| ||||    
T  9916649 tatgtgttacttatttgggaacaattaaaataaataaaagataacgatttagagatttg 9916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 389
Target Start/End: Original strand, 9924461 - 9924619
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| |||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  9924461 ttgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaa 9924560  T
Q  333 ttcacattacttatttaggaacaa-caaaataaat-aaagataacggtttagagttttg 389  Q
    |     |||||||||| |||||||  ||||||||| |||||||||| ||||||| ||||    
T  9924561 tatgtgttacttatttgggaacaattaaaataaataaaagataacgatttagagatttg 9924619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 233 - 407
Target Start/End: Complemental strand, 5047502 - 5047328
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||| | ||   |||||||||||||| |||| ||    
T  5047502 ttgatggtcggatttaggcaagtgtaccaaatcatttaccaagtaataaagtg-taagtagattatcgtacctacgaagattgtcgtttcaaccaaaaaa 5047404  T
Q  333 ttcacattacttatttaggaacaacaaaataaat-aaagataacggtttagagttttgtaatttaatttgtttgca 407  Q
     |    || |||||||| |||||| ||||||||| |||||||| |||||||| ||||| |||||||||||||||||    
T  5047403 attgtgttgcttatttaagaacaataaaataaataaaagataagggtttagatttttgaaatttaatttgtttgca 5047328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 421
Target Start/End: Original strand, 16306690 - 16306867
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| ||||||||  ||||| |||| ||||||||||||||||||||| ||||||||||| ||| ||||| || |||||   ||||||||  |||||||||    
T  16306690 ttagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcattactta 16306789  T
Q  346 tttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    ||| ||||||| |||||||||||  |||||  |||||||||||||| |||||||| | ||| || |||||||||||||    
T  16306790 tttgggaacaataaaataaataaagagatatgggtttagagttttgaaatttaatatatttacaacagagcaaagttt 16306867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 8054158 - 8054062
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||   |||||||||| ||||||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtttc---caaacaattctcattacttattt 8054062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 7318269 - 7318345
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7318269 ttaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttc 7318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 433
Target Start/End: Original strand, 5797507 - 5797695
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||   |||| |||||||||    |||||||    
T  5797507 ttaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtcaaatcaaccaaacaatttgtgttactta 5797606  T
Q  346 tttaggaac--aacaaaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    ||| |||||  || |||||||| | |||||| |||||||| ||||  || ||||| | |||||| |||||||||||||  ||||||||||    
T  5797607 tttgggaacaaaataaaataaa-agagataagggtttagattttttcaagttaatctatttgcaacagagcaaagtttacctgttttgat 5797695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 244 - 369
Target Start/End: Original strand, 23093304 - 23093428
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattact 343  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||| || ||||||||||||||||  |  |||||||  |||||    
T  23093304 atttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatctacgtggattgtcgtttcaactaggcaattcaatttact 23093402  T
Q  344 tatttaggaacaacaaaataaataaa 369  Q
    ||||| ||||||| ||||||||||||    
T  23093403 tatttgggaacaagaaaataaataaa 23093428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 23100055 - 23099966
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc 335  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||   ||||||||||    
T  23100055 ttaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattc 23099966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 8979103 - 8979007
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||   |||||||||| ||||||||||||    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattt 8979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 10587127 - 10587051
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  10587127 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttc 10587051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 10584589 - 10584487
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||   |||||||||   |||||||    
T  10584589 ttagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttactta 10584490  T
Q  346 ttt 348  Q
    |||    
T  10584489 ttt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 16297923 - 16297821
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| | |||||||| ||||||||||||| ||||   ||||||||||||||||||||    
T  16297923 ttaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattcacattactta 16297824  T
Q  346 ttt 348  Q
    |||    
T  16297823 ttt 16297821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 18662441 - 18662539
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||   |||||||||||| ||||||||||    
T  18662441 gcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 31492928 - 31493001
Alignment:
Q  248 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  31492928 aggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttt 31493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 16365707 - 16365803
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||    |||||||||| | ||||||||||    
T  16365707 aagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattt 16365803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 388
Target Start/End: Complemental strand, 21885255 - 21885116
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||| | |||||||||||    |||||||||| | |||| ||| ||| |||||||||||||||| |||||||||||| |||||||    
T  21885255 ttaggcaagtgtaccaaatgggttaccaagtaa----gtgataagtaaaatatcatattcacgtggattgtcgtttcaaccaaacaattcacgttactta 21885160  T
Q  346 tttaggaac--aacaaaataaataaagataacggtttagagtttt 388  Q
    |||||||||  || |||||||| | |||||| |||||||||||||    
T  21885159 tttaggaacaaaataaaataaa-agagataagggtttagagtttt 21885116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 3329761 - 3329674
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaat 333  Q
    ||||| ||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  3329761 ttaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaat 3329674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 3734592 - 3734694
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    |||||||||||| |||||||    
T  3734592 ttaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttactta 3734691  T
Q  346 ttt 348  Q
    |||    
T  3734692 ttt 3734694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 9731730 - 9731628
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||| ||||| |||||||||||||   |||||||||| | |||||||    
T  9731730 ttaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttactta 9731631  T
Q  346 ttt 348  Q
    |||    
T  9731630 ttt 9731628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 365
Target Start/End: Original strand, 33035454 - 33035587
Alignment:
Q  231 tattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaac 330  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||||||| ||| || ||| |||||||  |||  |  |    
T  33035454 tattgatggtcggatttaggcaagtgtatcaaatcgtttacc-agtaataaagtgataggtagagtatcgcatctacgtggcttgtcgtaccaactaggc 33035552  T
Q  331 aattcacattacttatttaggaacaacaaaataaa 365  Q
    ||||||||||||||||||  |||||| ||||||||    
T  33035553 aattcacattacttatttgagaacaagaaaataaa 33035587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 369
Target Start/End: Original strand, 12391175 - 12391304
Alignment:
Q  240 tcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacat 339  Q
    |||| |||||||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||||| |||| | ||||||||||||| | ||  ||||   |    
T  12391175 tcggttttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgtttcaaccgaatgattcgtgt 12391274  T
Q  340 tacttatttaggaacaacaaaataaataaa 369  Q
    ||||||||||||||||| ||||||||||||    
T  12391275 tacttatttaggaacaataaaataaataaa 12391304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 421
Target Start/End: Complemental strand, 21912581 - 21912406
Alignment:
Q  248 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatt 347  Q
    ||||||||||| ||||| ||||| ||| ||||||||||||||||  ||||||||||| ||  |||||||||||||||  ||||||| ||| |||||||||    
T  21912581 aggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatctacggggattgtcgtttcaacaaaacaatccacgttacttatt 21912482  T
Q  348 taggaac--aacaaaataaataaagataacggtttagagttttg-taatttaatttgtttgcagcagagcaaagttt 421  Q
    | | |||  || |||||||||  |||||| ||||||||||||||  || ||||| | |||||| |||||||||||||    
T  21912481 tggaaacaaaataaaataaat-gagataagggtttagagttttgcaaagttaatctatttgcaacagagcaaagttt 21912406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 26134854 - 26134750
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| || |||| ||||||  | ||||||||| |||    
T  26134854 ggatttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccacatagactgtcatttcaactagacaattcacgtta 26134756  T
Q  342 cttatt 347  Q
    ||||||    
T  26134755 cttatt 26134750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 2563818 - 2563889
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  2563818 gcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttc 2563889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 13759957 - 13759861
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||||||||||   |||||| ||| | ||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttattt 13759861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 2350850 - 2350775
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| | ||||||||||||||||||||||||||    
T  2350850 ttaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttt 2350775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 8054589 - 8054490
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| | |||||||||||   ||||||||||   ||||||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 4986551 - 4986627
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||||||||||||||||    
T  4986551 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttc 4986627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 4990649 - 4990725
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||||||||||||||||    
T  4990649 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttc 4990725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 407
Target Start/End: Original strand, 5530017 - 5530179
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||  |||| |||||||   |||||||||    |||||||    
T  5530017 ttaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgttactta 5530116  T
Q  346 tttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgca 407  Q
    |||   ||||| | |||||||||  |||||| ||||||||| |||| |||||||| ||||||||    
T  5530117 tttgataacaaaataataaataaagagataagggtttagag-tttgcaatttaatctgtttgca 5530179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 11221263 - 11221191
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| |||||||||||||    
T  11221263 gcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttc 11221191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 15869591 - 15869659
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  15869591 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatt 15869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 4785832 - 4785934
Alignment:
Q  245 tttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactt 344  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||| |||||||||||||   ||| || ||||| ||||||    
T  4785832 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttactt 4785930  T
Q  345 attt 348  Q
    ||||    
T  4785931 attt 4785934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 4818832 - 4818934
Alignment:
Q  245 tttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactt 344  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||| |||||||||||||   ||| || ||||| ||||||    
T  4818832 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttactt 4818930  T
Q  345 attt 348  Q
    ||||    
T  4818931 attt 4818934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 7397192 - 7397266
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  7397192 ttaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtcgttt 7397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 18369080 - 18368981
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||||   ||||||||||   ||||||||||    
T  18369080 ggcaagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 1872781 - 1872933
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||  ||||||||| || |||||||| | ||||||||| ||||||||||||||||   |||||||||||  ||||||||||   |||||||    
T  1872781 ttaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgttactta 1872880  T
Q  346 tttaggaacaacaaaataaataa---agataacggtttagagttttgtaattt 395  Q
    |||  |||||| | |||||||||   |||||| ||||||||| || |||||||    
T  1872881 ttttagaacaaaataataaataaaagagataagggtttagagattagtaattt 1872933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 5108565 - 5108650
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc 335  Q
    ||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||   ||||||||||    
T  5108565 ggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattc 5108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 17153251 - 17153181
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  17153251 aagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttc 17153181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 365
Target Start/End: Complemental strand, 15303725 - 15303605
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattact 343  Q
    |||||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||| | ||||||||| |||  |   ||||||| |||||    
T  15303725 atttagacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatctacacgaattgtcgttccaactaggaaattcacgttact 15303627  T
Q  344 tatttaggaacaacaaaataaa 365  Q
    |||||  |||||| ||||||||    
T  15303626 tatttgagaacaataaaataaa 15303605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 16224159 - 16224063
Alignment:
Q  327 aaacaattcacattacttatttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    ||||||||  |||||||||||| |||||||||||||||||||  |||||| ||| |||||||||  |||||||| |||||||| |||||||||||||    
T  16224159 aaacaatttgcattacttatttgggaacaacaaaataaataaagagataagggtgtagagtttttaaatttaatatgtttgcaacagagcaaagttt 16224063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 9574403 - 9574479
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||  |||||| |||||    
T  9574403 ttaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttc 9574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 12181604 - 12181680
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||| ||||||||||||||  |||||||||||||| ||||| |||| |||||||||||| |||||||||||    
T  12181604 ttaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttc 12181680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 11803080 - 11803178
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| || || || |||||||||||||||||||| ||||||||||||||| |||||||| ||||   |||||||||| | ||||||||||    
T  11803080 ggcaagtgtaccaa-tctttaacaaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttattt 11803178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 12329678 - 12329753
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||| |||||||||||||||||||||||| ||| |||||| || ||||| ||||||||| ||||||||||||    
T  12329678 ttaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttt 12329753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 6013589 - 6013691
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||| |||| |||||| | |||||||||||| ||||||||||||||| ||||| || ||| |  |||||||||  | |||||||    
T  6013589 ttaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttactta 6013688  T
Q  346 ttt 348  Q
    |||    
T  6013689 ttt 6013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 8313488 - 8313422
Alignment:
Q  256 gtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttc 8313422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 9245177 - 9245279
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||| |||||| ||||||||||||||||| ||| || |||| | |||||||||||||||||||||||| ||||  | |||||||||   |||||||    
T  9245177 ttaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttactta 9245276  T
Q  346 ttt 348  Q
    |||    
T  9245277 ttt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 21227160 - 21227249
Alignment:
Q  232 attgaaggtcggatttaggcaag-tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    ||||| ||| ||||||||||||  ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  21227160 attgatggttggatttaggcaaaatgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatctacatgaattctcgtt 21227249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 1584541 - 1584615
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||| || |||||||||||||||||||||||||  ||||||||||||||| ||||||| |||||    
T  1584541 ttaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttc 1584615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 1848325 - 1848228
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||   |||||||||  | ||||||||||    
T  1848325 ggcaagtgtaccaaattgt--accaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttattt 1848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 18661590 - 18661654
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||| |||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatt 18661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 1587665 - 1587779
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||| ||||||||||||||||| ||||| ||||||||||| || |||||| |||| |||| ||| || ||||||  |||||||    
T  1587665 ttgatggtcggatt-aggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaa 1587763  T
Q  333 ttcacattacttattt 348  Q
    ||| | |||| |||||    
T  1587764 ttcgcgttacctattt 1587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 348
Target Start/End: Complemental strand, 7492358 - 7492264
Alignment:
Q  253 agtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||| |||  ||| |||||||| ||||||||| ||||||||||||||| ||||||| |||||  ||||||||||  ||||||||||||    
T  7492358 agtgtaccaaattgttatcca-gtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttattt 7492264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 20582258 - 20582328
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||| ||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||| ||||||||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttc 20582328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 22339417 - 22339304
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaata---aagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    |||| ||| ||||||||||| |||| |||||||||   |||||||||||| ||||||| |||| || |||||||||||||   |||||||||| | ||||    
T  22339417 ttagacaaatgtaccaaatcatttatcaagtaatattaaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttac 22339318  T
Q  343 ttatttaggaacaa 356  Q
    |||||| |||||||    
T  22339317 ttatttgggaacaa 22339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 6042457 - 6042558
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||| |||||||||||||| |||||||| || |||||| |||||||||||||||  | ||||||||||  ||||||||||  | |||||||    
T  6042457 ttagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttactta 6042555  T
Q  346 ttt 348  Q
    |||    
T  6042556 ttt 6042558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 9890171 - 9890237
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatc 304  Q
    ||||||||||| |||||||||| |||||||||||| |||||||||||  |||||| |||||||||||    
T  9890171 ggtcggatttaagcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtatc 9890237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 12407280 - 12407378
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaac 330  Q
    ||||| |||||| ||||| |||||||| ||||| ||||||||| ||||||||| ||||| | ||| |||||| |||| | ||||||||||||| |||||    
T  12407280 attgatggtcggttttagtcaagtgtatcaaatagtttaccaaataataaagtaataagaaaagtgtcgtattcacaagaattgtcgtttcaaccaaac 12407378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 14196075 - 14195974
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||| |||| |||||||||| | ||| | |||||   |||||||||| | |||||||    
T  14196075 ttaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttactta 14195977  T
Q  346 ttt 348  Q
    |||    
T  14195976 ttt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 9720957 - 9721067
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||        |||||||||||||| |||  |||||||| |||||||||| | | ||    
T  9720957 gatttatgcaagtgtaccaaatcgtttaccaaataataaagtgata--------atcgtatccacatgaattaccgtttcaaccaaacaattcgcgtcac 9721048  T
Q  343 ttatttaggaacaacaaaa 361  Q
    |||||| | ||||| ||||    
T  9721049 ttatttggaaacaataaaa 9721067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 9866646 - 9866542
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    |||||| ||||||||||||||| ||||||||| |||||||||| |||||| |||||| ||||||||   |||||||||  ||  | ||||||||| ||||    
T  9866646 gatttacgcaagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatccacaataattgtcgttctaactagacaattcacgttac 9866548  T
Q  343 ttattt 348  Q
    ||||||    
T  9866547 ttattt 9866542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 14755245 - 14755157
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||||||| || |||||||||||||||||||| |||||| |||||||| ||||| |||||| |||||||| | ||||| |||||    
T  14755245 ttgatggtcggatt-agacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttc 14755157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 18467474 - 18467523
Alignment:
Q  273 aagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttc 18467523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 39273263 - 39273202
Alignment:
Q  261 aaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||| |||||||||||||||||||| |||||||||| || |||||||||||||||    
T  39273263 aaattgtttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttc 39273202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 9261200 - 9261276
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||| | |||| ||||||||||||||||| ||| ||||||| | ||||||||||||| |||||||||| ||||    
T  9261200 ttaggcaactttacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttc 9261276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 10648588 - 10648676
Alignment:
Q  260 caaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||||||| || |||||| ||| | || ||||||||||||||   |||||||||   ||||||||||    
T  10648588 caaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttattt 10648676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 21230308 - 21230384
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||| || ||||||||||||||| ||||||| ||||||||| |||||||||| || | ||||| |||||||    
T  21230308 ttaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttc 21230384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 4579095 - 4579153
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  4579095 taggcaagtgttccaaatcgtttactaagtaat-aagtgataagtagagtatcgtatcca 4579153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 9130902 - 9130979
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcg--tatccacatggattgtcgtttc 322  Q
    ||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| |  |||||||||||||| |||||||    
T  9130902 ttaggcaagtgtatcaaattgtttatcaagtaataaagtg-taagtatagtattgtatatccacatggattatcgtttc 9130979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 19153294 - 19153337
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 289  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  19153294 ttaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 19153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 20752693 - 20752736
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 289  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20752693 ttaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 20752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 6005833 - 6005934
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| |||| |||||||| ||||||||| ||||||| || |||  | ||||| ||||||||||||||||||||||    |||||||||||| |||||||    
T  6005833 ttaggtaagtttaccaaattgtttaccaattaataaattg-taaccagagtattgtatccacatggattgtcgtttggtccaaacaattcacgttactta 6005931  T
Q  346 ttt 348  Q
    |||    
T  6005932 ttt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 13418533 - 13418606
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaa-gtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||| | |||||||| ||||    
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttc 13418606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 17077124 - 17077226
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| ||| |||||||||| ||||| ||| ||||||||||||| ||| ||||| |||||||   |||||||||||||   |||||||||||  |||||||    
T  17077124 ttagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttactta 17077223  T
Q  346 ttt 348  Q
    |||    
T  17077224 ttt 17077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 395
Target Start/End: Original strand, 18495357 - 18495517
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| || ||||||||| |||| |||||| |||||||||||||||||||| ||||  |||||||   |||||||||||||    ||||||    
T  18495357 ttgatggtcggatt-agtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaa 18495455  T
Q  333 ttcacattacttatttaggaacaacaaaataaataaagataacggtttagagttttgtaattt 395  Q
    ||    ||||||||||  |||||| || ||||| | |||||| ||||||||| |||| |||||    
T  18495456 tttgtgttacttatttgagaacaaaaatataaa-agagataagggtttagagatttgcaattt 18495517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 8877441 - 8877486
Alignment:
Q  270 accaagtaataaagtgataagtatagtatcgtatccacatggattg 315  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccacatggattg 8877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 21102374 - 21102317
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaat 325  Q
    ||||||||||||||||||||||||| ||||| |||| ||||  |||||||||||||||    
T  21102374 ttaccaagtaataaagtgataagtagagtattgtattcacaatgattgtcgtttcaat 21102317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 369
Target Start/End: Original strand, 1882365 - 1882488
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||  |||||||||||| |||||||| | |||||| ||  |||| ||||||| ||  || |||||||||   ||||||||  | |||||||    
T  1882365 ttaggcaagtgtgacaaatcgtttactaagtaatacaatgataactagggtattgtatccatataaatggtcgtttcatataaacaatttgcgttactta 1882464  T
Q  346 tttaggaacaacaaaataaataaa 369  Q
    |||| |||||| | ||||||||||    
T  1882465 tttaagaacaaaataataaataaa 1882488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 421
Target Start/End: Complemental strand, 36117537 - 36117474
Alignment:
Q  358 aaaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    ||||||||||||||| | | | |||||||||| ||||||||||||||||| |||| ||||||||    
T  36117537 aaaataaataaagatgaggatgtagagttttgcaatttaatttgtttgcaacagaacaaagttt 36117474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 1814111 - 1814153
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgata 288  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  1814111 ttaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 13277525 - 13277575
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||| |||||||| || |||||||||||||||||||||||| ||||    
T  13277525 caagtaatacagtgataaatagagtatcgtatccacatggattgtcctttc 13277575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 7782555 - 7782659
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattact 343  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||| |  | ||||||||| |||  || ||||||| |||  |  ||||| ||||||||    
T  7782555 atttaggcgagtgtaccaaatcg-ttacccagtaataaagtgataaattgaatatcgtatctacagagactgtcgttccaactaggcaattaacattact 7782653  T
Q  344 tattta 349  Q
    ||||||    
T  7782654 tattta 7782659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 362
Target Start/End: Original strand, 17203008 - 17203135
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||| ||||  |||| |||||  |||||||||||| ||||||| |||||||||| |||  |||||||||||||   |||||||    
T  17203008 ttgatggtcggatt-aggcaaatgtattaaattgtttatgaagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaa 17203105  T
Q  333 ttcacattacttatttaggaacaacaaaat 362  Q
    | | | ||||||||||  |||||| |||||    
T  17203106 tccgcgttacttatttttgaacaataaaat 17203135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 2504181 - 2504244
Alignment:
Q  261 aaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaat 325  Q
    |||| |||||||||||||||||||| || ||||| ||||||||| ||||||||||| ||| ||||    
T  2504181 aaattgtttaccaagtaataaagtg-taggtatattatcgtatctacatggattgttgttccaat 2504244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 4258990 - 4258911
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaa 324  Q
    |||||| |||||||| ||||||||||||||| ||||||| || ||| || ||||||||||||| |  |||||| |||||||    
T  4258990 atttagacaagtgtaacaaatcgtttaccaaataataaaatg-taactagagtatcgtatccataatgattgttgtttcaa 4258911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 16059099 - 16059048
Alignment:
Q  272 caagtaataaagtga-taagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  16059099 caagtaataaagttagtaagtagagtatcgtatccacatggattgtcctttc 16059048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 8938313 - 8938223
Alignment:
Q  275 gtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaaataaa 365  Q
    ||||||||||  |||||| ||||||  ||||| ||||||||||||| |||  |  ||||||||||||||||| || ||| || ||||||||    
T  8938313 gtaataaagtagtaagtagagtatcaaatccaaatggattgtcgttccaactaggcaattcacattacttatctatgaataataaaataaa 8938223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 20174564 - 20174641
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    |||||||| ||||| ||||||||||||||| | ||||||||||| ||| || ||||||| ||  ||||||||| |||||    
T  20174564 ggatttagacaagtataccaaatcgtttactaggtaataaagtg-taactagagtatcgcattaacatggattttcgtt 20174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 2453725 - 2453837
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    |||||||||||||||||  |||| ||||| ||||||||||| |  |||||| |||||||||| ||||| |||| | ||| |||  | |||||||   |||    
T  2453725 ggatttaggcaagtgtattaaattgtttatcaagtaataaaat-ttaagtagagtatcgtattcacatagattattgttccaactagacaattcgtgtta 2453823  T
Q  342 cttatttaggaaca 355  Q
    ||||||| ||||||    
T  2453824 cttatttgggaaca 2453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 4449002 - 4449047
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagggactgtc 4449047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 7748189 - 7748115
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    |||| |||||||||| ||||||||| |   || |||||||||||||||  ||||||||||||||||||||| |||||    
T  7748189 attttggcaagtgtatcaaatcgtt-atttagaaataaagtgataagtg-agtatcgtatccacatggattatcgtt 7748115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 14755096 - 14755060
Alignment:
Q  385 ttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  14755096 ttttgaaatttaatttgtttgcagtagagcaaagttt 14755060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 4e-48; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 242 - 433
Target Start/End: Original strand, 14075586 - 14075779
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    ||||||||| || ||||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||   | |||    
T  14075586 ggatttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgtta 14075685  T
Q  342 cttatttaggaacaacaaaataaataa-agataacggtttagagttttgt-aatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    |||||||||||| || ||||||||||| |||||| ||||||||||||||| || ||||| |||||||| ||| |||||||||  ||||||||||    
T  14075686 cttatttaggaataataaaataaataagagataagggtttagagttttgtaaagttaatatgtttgcaacagtgcaaagtttccctgttttgat 14075779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 233 - 430
Target Start/End: Original strand, 5850925 - 5851121
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| || |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  5850925 ttgatggtcggatt-agtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaa 5851023  T
Q  333 ttcacattacttatttaggaacaaca-aaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgtttt 430  Q
    | |   ||||||||||  |||||| | ||||||| | |||||| |||| ||||||||| |||||||| |||||||| | ||||||| |||  |||||||    
T  5851024 tccgtgttacttatttgagaacaaaataaataaa-agagataatggttaagagttttgcaatttaatatgtttgcaacggagcaaaatttacctgtttt 5851121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 247 - 420
Target Start/End: Original strand, 24904630 - 24904805
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttat 346  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||  ||||||||||||    ||||||||||||||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttat 24904729  T
Q  347 ttaggaacaacaaaataaataaag--ataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    ||  |||||| |||||||||||||  | || |||||||||||||  |||||||| ||||||||  |||| ||||||    
T  24904730 ttgagaacaataaaataaataaagaaagaagggtttagagtttttcaatttaatctgtttgcataagagaaaagtt 24904805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 29382464 - 29382362
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||  | |||||||    
T  29382464 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttactta 29382365  T
Q  346 ttt 348  Q
    |||    
T  29382364 ttt 29382362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 246 - 420
Target Start/End: Original strand, 15238795 - 15238971
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| ||||| ||||||||||||| ||| ||||||||| | ||||||||||||||| |||||||||||    ||||||||| | |||||||    
T  15238795 ttaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttactta 15238894  T
Q  346 tttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    ||  ||| ||| |||||||||||  |||||| |||||| ||||||| |||||||| |||||||| || |||||||||    
T  15238895 ttagggatcaataaaataaataaagagataagggtttatagttttgcaatttaatctgtttgcaacatagcaaagtt 15238971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 31288346 - 31288512
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | |||||||| |||||| ||||  |||| |    
T  31288346 ggtcggatttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttcaaccaaatcattcgc 31288444  T
Q  338 attacttatttaggaacaacaaaat-aaataaagataacggtttagagttttgtaatttaatttgttt 404  Q
     ||| |||||    ||||| ||||| ||||||| |||| |||||| ||||||| |||||||| |||||    
T  31288445 gttaattattcgaaaacaataaaataaaataaaaataagggtttaaagttttgcaatttaatctgttt 31288512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 14528145 - 14528247
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||   ||||||| |||| |||||||    
T  14528145 ttaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttactta 14528244  T
Q  346 ttt 348  Q
    |||    
T  14528245 ttt 14528247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 24269594 - 24269695
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||   |||||||||||||||| |||    
T  24269594 ttaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattattta 24269692  T
Q  346 ttt 348  Q
    |||    
T  24269693 ttt 24269695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 13315089 - 13314993
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||   |||||||||| | ||||||||||    
T  13315089 aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttattt 13314993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 17101990 - 17101909
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaat 333  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||  ||||||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaat 17101909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 389
Target Start/End: Original strand, 17976615 - 17976758
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||  |||| |||||||    | ||| ||| |||||||||    
T  17976615 ttaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcattactta 17976714  T
Q  346 tttaggaacaaca-aaataaataaagataacggtttagagttttg 389  Q
    ||| ||||||| | |||||||| ||||||| ||||||||| ||||    
T  17976715 tttgggaacaaaataaataaat-aagataagggtttagagatttg 17976758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 24114385 - 24114309
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||    
T  24114385 ttaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttc 24114309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 246 - 416
Target Start/End: Complemental strand, 5053024 - 5052856
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||| ||||| ||||||||||| ||| | ||| |    |||||||||||  ||||||    
T  5053024 ttaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccacatgaatt-ttgttgcgtctaaacaattcacgctactta 5052926  T
Q  346 tttaggaacaaca-aaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaa 416  Q
    ||| ||||||| | |||||||| ||||||| |||||| || |||| |||||||| |||||||| ||||||||    
T  5052925 tttgggaacaaaataaataaat-aagataagggtttacag-tttgcaatttaatctgtttgcaacagagcaa 5052856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  255 tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcg 318  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 2637603 - 2637670
Alignment:
Q  255 tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttc 2637670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 365
Target Start/End: Original strand, 15292719 - 15292845
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||| ||| ||| || |||||||||||||||| |||| |  ||||||||    
T  15292719 ggtcggatttaggcaagaatatgaaataatttaccaagtaataaagtg-taagtagagtttcggattcacatggattgtcgttccaattaggcaattcac 15292817  T
Q  338 attacttatttaggaacaacaaaataaa 365  Q
     |||||||||| ||||||| ||||||||    
T  15292818 gttacttatttgggaacaagaaaataaa 15292845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 365
Target Start/End: Original strand, 15473088 - 15473214
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||| ||| ||| || |||||||||||||||| |||| |  ||||||||    
T  15473088 ggtcggatttaggcaagaatatgaaataatttaccaagtaataaagtg-taagtagagtttcggattcacatggattgtcgttccaattaggcaattcac 15473186  T
Q  338 attacttatttaggaacaacaaaataaa 365  Q
     |||||||||| ||||||| ||||||||    
T  15473187 gttacttatttgggaacaagaaaataaa 15473214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 348
Target Start/End: Complemental strand, 24119884 - 24119770
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||| |||||||| |||||| ||||| ||||||||||||||| ||||| |||  ||  ||    
T  24119884 ttgatggtcgaatttagacaagtgtgccaaatcgtttaccaagttataaagtg-taagtagagtattgtatccacatggattttcgttccaactaagaaa 24119786  T
Q  333 ttcacattacttattt 348  Q
    |||||| |||||||||    
T  24119785 ttcacactacttattt 24119770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 26008011 - 26008090
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | | ||||||||    
T  26008011 ggtcgaatttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtc 26008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 26615339 - 26615246
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||| ||| |||||||||||||| || |||||||| |||||||    
T  26615339 caagtgtatcaaatcgtt-accaactaataaagtgataagtagagtattgtatccatatgaattgtcgtttcaattaagcaattcacgttactta 26615246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 30122257 - 30122156
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||| |||||| ||||||||||||||||| |||    |||||||||| |||||||||    
T  30122257 ttaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattactta 30122159  T
Q  346 ttt 348  Q
    |||    
T  30122158 ttt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 34497111 - 34497213
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||| || |||||||||||||||||||||||||||| |||| ||||||||||||| |  || |||||||||   |||||||| ||| |||||||    
T  34497111 ttaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttactta 34497210  T
Q  346 ttt 348  Q
    |||    
T  34497211 ttt 34497213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 44011116 - 44011051
Alignment:
Q  256 gtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttc 44011051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 6884954 - 6885029
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  6884954 ttaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttc 6885029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 17509246 - 17509344
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||  ||||   |||||||||| | ||||||||||    
T  17509246 ggcacgtgtaccaa-tcgttaaccaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttattt 17509344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 30806600 - 30806493
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca-----catggattgtcgtttcaatcaaacaattcacatt 340  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||     || ||||||||||||||  |||||||||  | ||    
T  30806600 ttaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttgcgtt 30806501  T
Q  341 acttattt 348  Q
    ||||||||    
T  30806500 acttattt 30806493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 19786715 - 19786803
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||||||| || ||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||| | ||| |||||||||    
T  19786715 ttgatggtcggatt-agacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttc 19786803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 17969402 - 17969468
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatc 304  Q
    |||||||||| ||||||||| || |||| |||| |||||||||||||||||| ||||||||||||||    
T  17969402 ggtcggattttggcaagtgtgccgaatcatttatcaagtaataaagtgataaatatagtatcgtatc 17969468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 24110754 - 24110696
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 308  Q
    ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  24110754 gcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 24644838 - 24644935
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||| ||||||  ||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||    |||| ||||| ||||||||||||    
T  24644838 gcaagtgtgccaaattatttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattacttattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 30235373 - 30235419
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 292  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  30235373 ttaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 25182531 - 25182455
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||| |||||||  |||||||| ||||||||||| ||||| |||||||||| ||||||||||||| ||||    
T  25182531 ttagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttc 25182455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 28276874 - 28276801
Alignment:
Q  231 tattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  28276874 tattgatggtcggatt-aggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatcca 28276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 27659455 - 27659517
Alignment:
Q  260 caaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||  | |||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  27659455 caaatcgttagcgaagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttc 27659517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 14006088 - 14006161
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    |||||||| ||||||| || ||| |||||||||||||||| ||||||||| |||||| ||| |||||| |||||    
T  14006088 gatttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagtatcatattcacatgaattgt 14006161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 24723540 - 24723480
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatg 310  Q
    |||| ||||||||| || || ||||||||||||||||||||||| |||||||||||||||||    
T  24723540 ggcatgtgtaccaa-tcattcaccaagtaataaagtgataagtaaagtatcgtatccacatg 24723480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 18448639 - 18448543
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| |||||||||||||||||| |||| || || |||||||| | |  |||||||||||    |||||||||| | ||||||||||    
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattt 18448543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 21314641 - 21314721
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||  |||||||||| ||| ||||| |||||||   |||||||| | | ||||||||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattt 21314721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 25226137 - 25226189
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 303  Q
    ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtat 25226189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 13697858 - 13697896
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt 284  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  13697858 ttaggcaagtgtaccaaatcgtttaccaattaataaagt 13697896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 17972166 - 17972237
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||| |||||| |||||||||| || | |||||||||||||| |||||| |||||||||||| |||||||||||    
T  17972166 attttggcaagcgtaccaaatcatt-atcaagtaataaagtg-taagtagagtatcgtatccgcatggattgtc 17972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 14628372 - 14628448
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||| ||||||||| |||||||||||||||  ||||||||| | ||| |||||| ||   |||||||||||    
T  14628372 ttaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaaatattgtatccgcagatattgtcgtttc 14628448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 28317431 - 28317518
Alignment:
Q  267 tttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaaca 355  Q
    ||||||||||||||||||| |||||| |||||| |||| ||||| ||||| |||||||  |  |||||||| ||||| ||||| |||||    
T  28317431 tttaccaagtaataaagtg-taagtagagtatcatatcaacatgtattgttgtttcaactaggcaattcacgttactcatttaagaaca 28317518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 12268185 - 12268232
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 285  Q
    ||||||||||||||||||| |||||||  |||| ||||||||||||||    
T  12268185 ggtcggatttaggcaagtgcaccaaataatttatcaagtaataaagtg 12268232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 19264064 - 19264108
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    ||||||||||||||||||||  |||||||||| || |||||||||    
T  19264064 caagtaataaagtgataagttaagtatcgtattcatatggattgt 19264108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 233 - 433
Target Start/End: Complemental strand, 28586146 - 28585945
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||| |||||| |||| |||||||||||||||||||  ||||||    
T  28586146 ttgatggtcggatttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaa 28586047  T
Q  333 ttcacattacttatttaggaacaacaaaataaa-taaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttg 431  Q
    | ||| |||||||||| | ||| | |||||||| ||||||||| |||||||| ||||| |||||||| ||||| || ||||| ||||||| |||||||||    
T  28586046 tccacgttacttatttggaaactataaaataaattaaagataagggtttagatttttgcaatttaatatgtttacaacagagaaaagtttatctgttttg 28585947  T
Q  432 at 433  Q
    ||    
T  28585946 at 28585945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 238 - 421
Target Start/End: Complemental strand, 28589541 - 28589353
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc-- 335  Q
    ||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||| ||||||||||| ||||||||| |||| |||||      
T  28589541 ggtcgaatttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttcaaccaaaaaattcgc 28589442  T
Q  336 --acattacttatttaggaacaacaaaataaat-aaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
      |||||||||||||   ||||| || |||||| |||||||| |||||||||||||| ||| |||| |||||||| ||||| |||||||    
T  28589441 gtacattacttatttgaaaacaataagataaataaaagataagggtttagagttttgcaatataatatgtttgcaacagagtaaagttt 28589353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 233 - 433
Target Start/End: Original strand, 9726006 - 9726207
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||    
T  9726006 ttgatggtcggatt-aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaa 9726104  T
Q  333 ttcacattacttatttaggaac--aacaaaataaataaagataacggtttagagttttg-taatttaatttgtttgcagcagagcaaagtttgtctgttt 429  Q
    ||  | |||||||||| |||||  || |||||||| | |||||| |||||| |||||||  || ||||| |||||| |  |||| |||||||  ||||||    
T  9726105 tttgcgttacttatttgggaacaaaataaaataaa-agagataagggtttaaagttttgcaaagttaatatgtttggaaaagagaaaagtttacctgttt 9726203  T
Q  430 tgat 433  Q
    ||||    
T  9726204 tgat 9726207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 369
Target Start/End: Original strand, 17729148 - 17729271
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||   ||||| |||| | |||| |     
T  17729148 ttaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgttacatg 17729247  T
Q  346 tttaggaacaacaaaataaataaa 369  Q
    ||| ||||||||||||||||||||    
T  17729248 tttgggaacaacaaaataaataaa 17729271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 12183430 - 12183332
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||   | |||||||||| ||||||||||    
T  12183430 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttacttattt 12183332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 27124589 - 27124493
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| | |||||||||| | ||||||||||    
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttattt 27124493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 368
Target Start/End: Original strand, 9385943 - 9386072
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||||| || | |||||||||||||| | ||||||||||||||||||  ||||| |||  ||||||||||||||||||||||||||  |  ||||||||    
T  9385943 ggtcggactttgacaagtgtaccaaattggttaccaagtaataaagtgc-aagtagagtcgcgtatccacatggattgtcgtttcaactaggcaattcac 9386041  T
Q  338 attacttatttaggaacaacaaaataaataa 368  Q
    ||||||||||||||||||| |||||||||||    
T  9386042 attacttatttaggaacaagaaaataaataa 9386072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 9516786 - 9516883
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||| || | ||||||||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattt 9516883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 347
Target Start/End: Complemental strand, 25927406 - 25927305
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||   |||||||||||| |||||||    
T  25927406 ttaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttactta 25927307  T
Q  346 tt 347  Q
    ||    
T  25927306 tt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 21907428 - 21907504
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  21907428 ttaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttc 21907504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 348
Target Start/End: Original strand, 22567823 - 22567938
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaaca 331  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||   ||||||    
T  22567823 attgatggtcggatt-aggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaaca 22567921  T
Q  332 attcacattacttattt 348  Q
    | |||| ||||||||||    
T  22567922 actcacgttacttattt 22567938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 348
Target Start/End: Complemental strand, 22410410 - 22410328
Alignment:
Q  266 gtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttattt 22410328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 23143718 - 23143820
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||| |||||||||||||   |||||||||||  |||||||    
T  23143718 ttaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgttactta 23143817  T
Q  346 ttt 348  Q
    |||    
T  23143818 ttt 23143820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 21672538 - 21672449
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc 335  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||   ||||||||||    
T  21672538 ttaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattc 21672449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 255 - 365
Target Start/End: Complemental strand, 23645861 - 23645751
Alignment:
Q  255 tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaac 354  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||   |||||||||  | ||| ||||||  ||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaac 23645762  T
Q  355 aacaaaataaa 365  Q
    || ||||||||    
T  23645761 aataaaataaa 23645751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 27737792 - 27737690
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||| ||||||| |||||   |||||||||| | |||||||    
T  27737792 ttaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttactta 27737693  T
Q  346 ttt 348  Q
    |||    
T  27737692 ttt 27737690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 21679954 - 21679865
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc 335  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| || ||||   ||||||||||    
T  21679954 ttaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattc 21679865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 11176946 - 11177022
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  11176946 ttaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttc 11177022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 17827192 - 17827093
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| |||||||  |||||||||||| |||| || |||||||||||||||||||||||||||||   |||||||||| | ||||||||||    
T  17827192 ggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattt 17827093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 20005977 - 20005906
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttc 20005906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 7543083 - 7542962
Alignment:
Q  225 taggattattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaa 324  Q
    ||||| |||||| ||||||||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||| |  |||| ||| ||||||     
T  7543083 taggagtattgatggtcggatt-aggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcat 7542985  T
Q  325 tcaaacaattcacattacttatt 347  Q
     |||||||||| | |||||||||    
T  7542984 ccaaacaattcgcgttacttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 8241273 - 8241373
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||| || ||| |||||    ||||||||||||||||||||    
T  8241273 ttaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattactta 8241370  T
Q  346 ttt 348  Q
    |||    
T  8241371 ttt 8241373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 18075491 - 18075416
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  18075491 ttaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttt 18075416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 349
Target Start/End: Complemental strand, 26215495 - 26215387
Alignment:
Q  239 gtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcaca 338  Q
    |||||||||||||||  |||||||||| ||| |||| |||||||||| |||||| ||||||||||||| || ||||||||||||||| |  ||||||||     
T  26215495 gtcggatttaggcaatagtaccaaatcattt-ccaaataataaagtg-taagtagagtatcgtatccatatagattgtcgtttcaattaggcaattcacg 26215398  T
Q  339 ttacttattta 349  Q
    |||||||||||    
T  26215397 ttacttattta 26215387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 20722291 - 20722209
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||  |||||||| ||||||||    
T  20722291 ttgatggtcggatttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccacaaggattgtc 20722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 14079547 - 14079491
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgta 302  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  14079547 ttaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 23844562 - 23844466
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| |||| | | |||||||||||||   ||||||| || | ||||||||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttattt 23844466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 21932155 - 21932100
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgt 301  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 4339731 - 4339833
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||||  |||||||||||    ||| |||||| |||||||||    
T  4339731 ttagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattactta 4339830  T
Q  346 ttt 348  Q
    |||    
T  4339831 ttt 4339833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 21688898 - 21688796
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| ||||||| | ||||||||||| ||  |||| ||||| | |||||||    
T  21688898 ttaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttactta 21688799  T
Q  346 ttt 348  Q
    |||    
T  21688798 ttt 21688796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 5624636 - 5624689
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatc 299  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5624636 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 2586717 - 2586769
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtat 298  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  2586717 ttaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat 2586769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 15466366 - 15466441
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| | | |||||||| ||||    
T  15466366 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttc 15466441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 28933763 - 28933687
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||||||||| || ||||| ||| ||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  28933763 ttaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtttc 28933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 365
Target Start/End: Original strand, 34478508 - 34478639
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||| |||||| ||||| | |||||||||||||||||| |||||||||| |||||| ||||||||||||||| |||||| | ||||||  |  |||    
T  34478508 ttgatggttggatttgggcaattctaccaaatcgtttaccaaataataaagtg-taagtagagtatcgtatccacaaggattgacatttcaactaggcaa 34478606  T
Q  333 ttcacattacttatttaggaacaacaaaataaa 365  Q
    ||||  |||||| ||| | ||||| ||||||||    
T  34478607 ttcatgttacttttttggaaacaataaaataaa 34478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 9899062 - 9898959
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-gataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactt 344  Q
    |||| |||||||||||||| |||||||||||||||||||  | ||||| ||||| ||||||||  ||||||| |||||  |||||| |||||| ||||||    
T  9899062 ttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaaccattcacgttactt 9898963  T
Q  345 attt 348  Q
    ||||    
T  9898962 attt 9898959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 33656006 - 33655901
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    |||||||||| | |||||||||| ||||||||||||||||||| ||| ||| | ||| ||||||||||| |||||||||| ||  | |||| ||||||||    
T  33656006 ggatttaggcgactgtaccaaat-gtttaccaagtaataaagt-atacgtaaaatattgtatccacatgaattgtcgtttaaactagacaactcacatta 33655909  T
Q  342 cttattta 349  Q
    ||||||||    
T  33655908 cttattta 33655901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 17299925 - 17299859
Alignment:
Q  255 tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| ||   ||||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgttt 17299859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 20145163 - 20145106
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 303  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  20145163 ttaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 22187676 - 22187733
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 303  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  22187676 ttaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 433
Target Start/End: Complemental strand, 24188263 - 24188146
Alignment:
Q  318 gtttcaatcaaacaattcacattacttatttaggaacaacaaaa-taaataaagataacgg-tttagagttttgtaatttaatttgtttgcagcagagca 415  Q
    |||||||  ||||||| | | ||| |||||| ||||||| |||| ||||||| ||||| || |||| ||||||| |||||||| |||||||| |||||||    
T  24188263 gtttcaactaaacaatccgcgttatttatttgggaacaataaaaataaataatgataaagggtttatagttttgcaatttaatctgtttgcaacagagca 24188164  T
Q  416 aagtttgtctgttttgat 433  Q
    |||||| |||||||||||    
T  24188163 aagtttatctgttttgat 24188146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 17382144 - 17382216
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||| ||||| ||||||||||||||  ||||||||||| |||| ||||||||||| ||| ||||||||||||    
T  17382144 ggcaaatgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgttt 17382216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 19244581 - 19244657
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| ||||||| ||| | |  ||||||||||||    
T  19244581 ttaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttc 19244657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 22566256 - 22566193
Alignment:
Q  255 tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcg 318  Q
    ||||||||||  |||||||||||||||||||||||||| |||||| |||||||| | |||||||    
T  22566256 tgtaccaaattatttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcg 22566193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 8039234 - 8039178
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 303  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  8039234 ttaggcaagtgtgccaaatcgtttaccaagtaataaagtg-taagtggagtatcgtat 8039178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 9386070 - 9386162
Alignment:
Q  276 taataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaaataaataaa 369  Q
    |||||||||| |||||| |||||||||||||||| |||| ||| |||||  |   ||||||  |||||||||||||||||| ||||||||||||    
T  9386070 taataaagtg-taagtagagtatcgtatccacatagattatcgattcaactaggaaattcaagttacttatttaggaacaagaaaataaataaa 9386162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 291  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 31629230 - 31629142
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    ||||| ||||| |||||| ||| ||||  |||||||||||||||||||||| ||||| ||| | ||  |||| ||||||||||||||||    
T  31629230 attgatggtcgaatttagacaattgtatgaaatcgtttaccaagtaataaaatgataggtagaataatgtattcacatggattgtcgtt 31629142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 317
Target Start/End: Original strand, 9838380 - 9838423
Alignment:
Q  274 agtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtc 9838423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 23232067 - 23231984
Alignment:
Q  265 cgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||  ||||| |||||| | | ||||||| |||   |||||||||| | ||||||||||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttattt 23231984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 24252284 - 24252209
Alignment:
Q  294 agtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaaataaataaa 369  Q
    ||||||||||||||||||||||||||||    ||||||||||   ||||||||||  |||||| ||||||||||||    
T  24252284 agtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttttgaacaataaaataaataaa 24252209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 24251516 - 24251585
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgt 319  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| | || |||| ||||||| || |||||||    
T  24251516 gcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgt 24251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 22413126 - 22413082
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||    
T  22413126 caagtaataaagttataagtagagtatcgtatctacatggattgt 22413082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 34092363 - 34092327
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgata 288  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34092363 aagtgtatcaaatcgtttaccaagtaataaagtgata 34092327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 23009471 - 23009421
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||| |||||||||||||| || |||||||||||| |||||||| ||||    
T  23009471 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttc 23009421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 23778893 - 23778943
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||| |||||||||||||| || |||||||||||| |||||||| ||||    
T  23778893 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttc 23778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 6630773 - 6630719
Alignment:
Q  266 gtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||  | ||||||| ||||||| |||||||| ||||||||||||    
T  6630773 gtttaccaagtaataa--taataagtagagtatcggatccacatagattgtcgtttc 6630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 15614294 - 15614218
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattg 315  Q
    ||||||||||||  || ||||| |||||||||| | ||||||||||| ||||||| | |||  |||||||||||||||    
T  15614294 ggtcggatttagaaaaatgtactaaatcgtttatccagtaataaagt-ataagtagattataatatccacatggattg 15614218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 17883887 - 17883799
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc 335  Q
    |||| ||| ||||||||||||||||||||||||||| ||| | |||| || |||| ||| ||| |||||||| ||||   ||||||||||    
T  17883887 ttagccaaatgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattc 17883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 21841788 - 21841715
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| |  || | |||||||||||| |||||||| ||| | | |||||||||||||||| ||||    
T  21841788 ggcaagtgtaccaattgtttcatcaagtaataaagagataagtagagttttgaatccacatggattgtcctttc 21841715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 25781796 - 25781888
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||  ||||||||| |||||| || | ||||||||      | |||||||||||   |||||||||||| ||||||||||    
T  25781796 caagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtat-----ggaattgtcgtttcgtccaaacaattcacgttacttattt 25781888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 24657532 - 24657488
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    ||||||||||| ||||||||  ||||||||||||||| |||||||    
T  24657532 caagtaataaaatgataagtcgagtatcgtatccacagggattgt 24657488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 26587622 - 26587662
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 292  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  26587622 aagtgtatcaaatcgtataccacgtaataaagtgataagta 26587662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 243 - 433
Target Start/End: Original strand, 19900573 - 19900763
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||| ||||  |||||||||| |||  |  |||||||||||||    
T  19900573 gatttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcacaaagattgtcgttccaactaggcaattcacattac 19900671  T
Q  343 ttatttaggaacaacaaaataaat-aaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    ||||||   ||||| ||||||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||||  ||||||||||    
T  19900672 ttatttcataacaataaaataaataaaagataagggtttagagttttgcaatttaatctgtttgcaacatagcaaagtttacctgttttgat 19900763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 246 - 433
Target Start/End: Original strand, 9052670 - 9052859
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| |||||||||||| ||  |||||| ||||||| |||||||||||| |||||||    
T  9052670 ttaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgttactta 9052768  T
Q  346 tttaggaacaacaaaataaataa---agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    ||| ||||||| |||||||||||   ||||||  ||||| ||||||  |||||||| ||||||||  |||| |||| ||  ||||||||||    
T  9052769 ttttggaacaataaaataaataaaagagataagagtttatagttttccaatttaatatgtttgcaatagaggaaagattaactgttttgat 9052859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 238 - 405
Target Start/End: Original strand, 11093952 - 11094119
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||| ||||| ||| ||| || ||||||||  |||||||||||||||||||||||||||    
T  11093952 ggtcggatttagataagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacagagattgtcgtttcaatcaaacaattcac 11094051  T
Q  338 attacttatttaggaacaaca-aaataaataaagataacggtttagagttttgtaatttaatttgtttg 405  Q
     || |||||||  |||||| | ||||||| |||| ||| ||||||| ||||||||||||||| ||||||    
T  11094052 gttgcttatttgagaacaatacaaataaaaaaag-taaaggtttagggttttgtaatttaatctgtttg 11094119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 11521288 - 11521145
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttagg 351  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||    |||| ||||||||||||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaactattcacattacttatttagg 11521189  T
Q  352 aacaacaaaataaataaagataacggtttagagttttgtaattt 395  Q
    ||||| | | ||||  ||||||| ||||||||| |||| |||||    
T  11521188 aacaaaatactaaaataagataagggtttagagatttgcaattt 11521145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 240 - 433
Target Start/End: Complemental strand, 1833702 - 1833511
Alignment:
Q  240 tcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacat 339  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||||| |     |||||||||||||||||||||||||   |||||||| |||    
T  1833702 tcggatttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagtagat----gtatccacatggattgtcgtttcaactgaacaattcgcat 1833607  T
Q  340 tacttatttaggaacaa-caaaataaat-aaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    |||||||||||||||||  ||||||||| ||||||||  ||||| ||||| | |||||||| |||||| |  || |||||||||  ||||||||||    
T  1833606 tacttatttaggaacaataaaaataaataaaagataagtgtttaaagtttcgcaatttaatctgtttgtaatagcgcaaagttttcctgttttgat 1833511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 13692772 - 13692670
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||||||   |||||||    
T  13692772 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttactta 13692673  T
Q  346 ttt 348  Q
    |||    
T  13692672 ttt 13692670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 13908854 - 13908952
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||||   ||||||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttattt 13908952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 19492798 - 19492701
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||  |||||||||| | ||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattt 19492701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 14648891 - 14648966
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14648891 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttc 14648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 17671998 - 17672074
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  17671998 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttc 17672074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 365
Target Start/End: Original strand, 19882624 - 19882755
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||   |||||||    
T  19882624 ttgatggtcggatt-aggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaa 19882722  T
Q  333 ttcacattacttatttaggaacaacaaaataaa 365  Q
    ||| | |||||||||| | ||||| | ||||||    
T  19882723 ttcgcgttacttatttggaaacaaaataataaa 19882755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 433
Target Start/End: Complemental strand, 11700672 - 11700488
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| || |||||||||||||||  ||||||| ||||  | ||||||||    |||| ||    
T  11700672 ttagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca-agattgtcttttcgtttaaacaatttgtgttaccta 11700574  T
Q  346 tttaggaacaacaaaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
    ||| | ||||| | |||||||||||||||| |||||||| |||| |||||||| |||||||| |||||| ||||||| || |||||||    
T  11700573 tttggaaacaaaataataaataaagataacagtttagag-tttgcaatttaatatgtttgcaacagagc-aagtttgcctattttgat 11700488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 233 - 364
Target Start/End: Complemental strand, 21323990 - 21323860
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||||||||| |||||||||||||| |||||| ||||| |||| |||||||||||||||| ||||||||||||   |||||||    
T  21323990 ttgatggtcggatt-aggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaa 21323892  T
Q  333 ttcacattacttatttaggaacaacaaaataa 364  Q
    ||| | ||||||||||  |||||| |||||||    
T  21323891 ttcgcgttacttatttttgaacaataaaataa 21323860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 17216816 - 17216913
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttat 346  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||   |||||||||| | ||||||||    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttat 17216913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 12578369 - 12578294
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  12578369 ttaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttt 12578294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 19929777 - 19929702
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttc 19929702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 348
Target Start/End: Complemental strand, 25121340 - 25121227
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| ||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||   |||||||    
T  25121340 ttgatggtcggatt-aggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaa 25121243  T
Q  333 ttcacattacttattt 348  Q
    ||| | ||||||||||    
T  25121242 ttcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 11490528 - 11490630
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||   |||||||||| | |||||||    
T  11490528 ttaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttactta 11490627  T
Q  346 ttt 348  Q
    |||    
T  11490628 ttt 11490630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 12839883 - 12839773
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| |||||||| |||||| ||||||| ||||||| ||||| ||| ||||||||||||||| |||||||| |||||||| |||||||| ||||| |||    
T  12839883 ttaggaaagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccacaaggattgtcatttcaatctaacaattcgcattaatta 12839784  T
Q  346 tttaggaacaa 356  Q
    ||| |||||||    
T  12839783 tttgggaacaa 12839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 13128977 - 13128875
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| | |||||||||||||   ||||||| || | |||||||    
T  13128977 ttaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttactta 13128878  T
Q  346 ttt 348  Q
    |||    
T  13128877 ttt 13128875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 19562277 - 19562179
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||  |||||||||   |||||||||||    
T  19562277 gcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattt 19562179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 228 - 369
Target Start/End: Complemental strand, 20317898 - 20317758
Alignment:
Q  228 gattattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatca 327  Q
    ||||||||| ||||||||||| |||||| ||| |||| |||||||| |||||||| || |||||| |||||||||| |||||| |||||||||  ||  |    
T  20317898 gattattgatggtcggatttaagcaagtatactaaattgtttaccatgtaataaaatg-taagtagagtatcgtattcacatgaattgtcgttctaacta 20317800  T
Q  328 aacaattcacattacttatttaggaacaacaaaataaataaa 369  Q
     | ||||||||||| |||||||||||||| |||| |||||||    
T  20317799 gaaaattcacattatttatttaggaacaataaaacaaataaa 20317758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 7582299 - 7582395
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||   ||||||||   ||||||||||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattt 7582395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 433
Target Start/End: Original strand, 22526369 - 22526549
Alignment:
Q  255 tgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaac 354  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||     |||||||||| |||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttatttgggaac 22526468  T
Q  355 aacaaaataaataaagat-aacggtttagagttttgta-atttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
     | ||||  || | |||| ||  ||||||||||||| | | |||||||||||||| || | ||||||||  ||||||||||    
T  22526469 gataaaaataaaagagatgaagagtttagagttttgcagagttaatttgtttgcaacaaaacaaagtttacctgttttgat 22526549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 9737624 - 9737531
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgat-----aagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     ||||| ||||||||||||||||||||||| |||||    
T  9737624 ttgatggtcggatt-aggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttc 9737531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 19092291 - 19092393
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| | ||||||| || ||||||||||||||||||   ||||||| |||| || ||||    
T  19092291 ttaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgctta 19092390  T
Q  346 ttt 348  Q
    |||    
T  19092391 ttt 19092393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 20315000 - 20315098
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||| |||||||| |||||||||||||   |||||||||  | ||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 20829841 - 20829740
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||| ||||||| |||||  ||||| ||||  |||||||||    
T  20829841 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcattactta 20829743  T
Q  346 ttt 348  Q
    |||    
T  20829742 ttt 20829740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 13992973 - 13992904
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  13992973 aagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttt 13992904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 15047124 - 15047200
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  15047124 ttaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttc 15047200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 15107300 - 15107224
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  15107300 ttaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttc 15107224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 349
Target Start/End: Complemental strand, 22357638 - 22357532
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta---tagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||   || |||||||||||||||||||||||||||| | ||||| |||   ||||    
T  22357638 ttaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaacagttcgtgttac 22357539  T
Q  343 ttattta 349  Q
    |||||||    
T  22357538 ttattta 22357532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 5679201 - 5679303
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| | | | |||||   |||||||||| | |||||||    
T  5679201 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactta 5679300  T
Q  346 ttt 348  Q
    |||    
T  5679301 ttt 5679303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 17709757 - 17709823
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgt 17709823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 17951412 - 17951339
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  17951412 attgatggtcggatt-agacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 17955264 - 17955191
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  17955264 attgatggtcggatt-agacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17955191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 22176064 - 22176005
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatcca 22176005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 22345005 - 22345095
Alignment:
Q  234 tgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaat 325  Q
    |||||||||||||||||||| || ||| |||| |||| |||||||||||| | || ||| ||||||||||||||||||||||||||| ||||    
T  22345005 tgaaggtcggatttaggcaaatgcacctaatcatttatcaagtaataaagag-tatgtagagtatcgtatccacatggattgtcgttccaat 22345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 7611266 - 7611356
Alignment:
Q  275 gtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaaataaa 365  Q
    ||||||||||  |||||||||||||  ||||||||||||||||||| ||||    ||||||||||||||||| ||||||||| ||||||||    
T  7611266 gtaataaagtagtaagtatagtatcaaatccacatggattgtcgttccaatttggcaattcacattacttatctaggaacaataaaataaa 7611356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 11933415 - 11933516
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||| || |||||||||||||||||| |||||||||||  ||||||||  |||||||||||||||||||   ||||||| || | |||||||    
T  11933415 ttaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttactta 11933513  T
Q  346 ttt 348  Q
    |||    
T  11933514 ttt 11933516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 40227773 - 40227873
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||| ||||||| | | ||||| ||||||  |||||||||| | |||||||    
T  40227773 ttaggcaagtgtaccaaatcgtt-accaagtaataaagtgataagt-taatattgtatccataggaattgtagtttcatccaaacaattcgcgttactta 40227870  T
Q  346 ttt 348  Q
    |||    
T  40227871 ttt 40227873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 15164768 - 15164865
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||||||||||| || | ||||| | ||||||||||||||| |||||||| ||||   |||||||||  | ||||||||||    
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttattt 15164865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 24639535 - 24639482
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttt 24639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 347
Target Start/End: Original strand, 3774821 - 3774923
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggat--tgtcgtttcaatcaaacaattcacattact 343  Q
    ||||||||||||| ||||| |||||| |||||||||||||  ||||| |||||| |||||||||| ||  ||||||||||  |||||||||||| |||||    
T  3774821 ttaggcaagtgtatcaaattgtttactaagtaataaagtg-caagtagagtatcatatccacatgaattgtgtcgtttcatccaaacaattcacgttact 3774919  T
Q  344 tatt 347  Q
    ||||    
T  3774920 tatt 3774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 361
Target Start/End: Complemental strand, 15050198 - 15050071
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | || |||   ||||||||||||| || |||  | ||||    
T  15050198 ttgatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtagaataccgtgaacacatggattgtcattccaactagacaa 15050100  T
Q  333 ttcacattacttatttaggaacaacaaaa 361  Q
    ||  | |||||||||| ||||||| ||||    
T  15050099 tttgcgttacttatttgggaacaataaaa 15050071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 361
Target Start/End: Original strand, 15104226 - 15104353
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | || |||   ||||||||||||| || |||  | ||||    
T  15104226 ttgatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtagaataccgtgaacacatggattgtcattccaactagacaa 15104324  T
Q  333 ttcacattacttatttaggaacaacaaaa 361  Q
    ||  | |||||||||| ||||||| ||||    
T  15104325 tttgcgttacttatttgggaacaataaaa 15104353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 19636682 - 19636587
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||| || ||||||||||||| |||||| ||||| ||||| | | ||||||||||||||  |||||||||||  ||||||||||    
T  19636682 aagtgtaccaaatcgtt-acaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattt 19636587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 23080343 - 23080439
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||| ||||  |||||||| |||||| |||||||||| | ||| |||| |||||||||||||||||||| |||||||||  | ||||||||||    
T  23080343 aagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttacttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 10106999 - 10107080
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||| |||||  |||||| | |||||||||||    
T  10106999 ggtcggatttaggcaagtgtagcaaatcgtttaccaagtaataaattg-caagtagagtattctatccatagggattgtcgtt 10107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 13587224 - 13587334
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||        |||||||||||||| |||  |||||||| |||||||||| | | ||    
T  13587224 gatttatgcaagtgtaccaaatcgtttaccaaataataaagtgata--------atcgtatccacatgaattaccgtttcaaccaaacaattcgcgtcac 13587315  T
Q  343 ttatttaggaacaacaaaa 361  Q
    |||||| | ||||| ||||    
T  13587316 ttatttggaaacaataaaa 13587334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 25643460 - 25643568
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttat 346  Q
    |||| |||||||| |||||||||  |||||||||||||| ||| || ||||||||||||||| || ||||| ||||||| |  ||||| || ||||||||    
T  25643460 taggtaagtgtactaaatcgtttgtcaagtaataaagtg-taactagagtatcgtatccacaggggttgtcatttcaattaggcaatttacgttacttat 25643558  T
Q  347 ttaggaacaa 356  Q
    || |||||||    
T  25643559 ttgggaacaa 25643568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 12318429 - 12318481
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtat 298  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  12318429 ttaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 19374909 - 19374841
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||   |||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttt 19374841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 26116001 - 26115905
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||| |||||||||| ||| ||| || ||||||||||||| | ||||||||| |||   ||||||||||   ||||||||||    
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtg-taattaaagtatcgtatccataaggattgtcgattcttccaaacaattcgttttacttattt 26115905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 16730499 - 16730400
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||| |||||| |||||| |||| ||| || ||||||||||||| ||||||||||||| | ||||| |||||||   ||||||| || | ||||||||||    
T  16730499 ggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttattt 16730400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 43941880 - 43941814
Alignment:
Q  256 gtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||  |||| |||||||||||||||||||||  ||||| ||||||||| |||||| |||||    
T  43941880 gtaccaaattatttatcaagtaataaagtgataagtaaggtatcctatccacatagattgttgtttc 43941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 22218706 - 22218644
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    |||||||| || ||||| |||| ||||| |||||||||||||| |||||| |||||||||||||    
T  22218706 gatttaggtaactgtacaaaattgtttatcaagtaataaagtg-taagtagagtatcgtatcca 22218644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 12761272 - 12761309
Alignment:
Q  273 aagtaataaagtgataagtatagtatcgtatccacatg 310  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  12761272 aagtaataaagtgataagtaaagtatcgtatctacatg 12761309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 25097856 - 25097901
Alignment:
Q  272 caagtaataaagtga-taagtatagtatcgtatccacatggattgt 316  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||    
T  25097856 caagtaataaagttagtaagtagagtatcgtatccacatggattgt 25097901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 10589730 - 10589781
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    ||||||||||||||||||||||||  ||| ||||||| ||| |||||||||||    
T  10589730 ttaccaagtaataaagtgataagt-gagtgtcgtatcaacagggattgtcgtt 10589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 13787257 - 13787194
Alignment:
Q  228 gattattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 292  Q
    |||| |||| |||||| ||||| |||||||| | ||| |||||| ||||||||||||||||||||    
T  13787257 gattgttgatggtcgg-tttagacaagtgtatcgaatggtttactaagtaataaagtgataagta 13787194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 17337216 - 17337136
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||| |||||||| |||||||||| ||||||||||||| |  ||||||| ||||   |||||||||  | ||||||||||    
T  17337216 ttaccgagtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttattt 17337136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 238 - 401
Target Start/End: Complemental strand, 8503181 - 8503015
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||||||| |||||| |||||||||  |    
T  8503181 ggtcgtatttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgc 8503082  T
Q  338 attacttatttaggaacaacaaaataaa---taaagataacggtttagagttttgtaatttaatttg 401  Q
     ||||| |||| ||||||| |||| |||    |||||||| | |||||||||||| |||||||||||    
T  8503081 gttactaatttgggaacaataaaaaaaaaataaaagataaggatttagagttttgcaatttaatttg 8503015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 238 - 407
Target Start/End: Original strand, 25939146 - 25939317
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||||||||||| | ||||||||| ||| |||| |||||||||||||| |||||| ||||||||||||| | ||||| ||||||||| ||||||||||||    
T  25939146 ggtcggatttagactagtgtaccacatcatttatcaagtaataaagtg-taagtaaagtatcgtatccataaggattttcgtttcaaccaaacaattcac 25939244  T
Q  338 attacttatttaggaacaacaaaataaataa---agataacggtttagagttttgtaatttaatttgtttgca 407  Q
     |||||| | |  |||||| |||||||||||   |||||| |||||||||||||| |||||||| ||||||||    
T  25939245 gttacttgtctgagaacaataaaataaataaaagagataagggtttagagttttgcaatttaatatgtttgca 25939317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 29719334 - 29719232
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||  ||||||||||| | |||||||    
T  29719334 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttactta 29719235  T
Q  346 ttt 348  Q
    |||    
T  29719234 ttt 29719232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 27909219 - 27909120
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | ||||||  |||||||||||| ||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattt 27909120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 25888323 - 25888245
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaa 324  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25888323 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgtttcaa 25888245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 232 - 348
Target Start/End: Complemental strand, 17743592 - 17743477
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaaca 331  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||   ||||||    
T  17743592 attgatggtcggatat-ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaaca 17743494  T
Q  332 attcacattacttattt 348  Q
    ||||   ||||||||||    
T  17743493 attcgtgttacttattt 17743477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 20174738 - 20174636
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||   |||||||||||  |||||||    
T  20174738 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttactta 20174639  T
Q  346 ttt 348  Q
    |||    
T  20174638 ttt 20174636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 349
Target Start/End: Complemental strand, 8447165 - 8447050
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||  | ||||    
T  8447165 ttgatggtcgaatttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtcgttccaactagacaa 8447067  T
Q  333 ttcacattacttattta 349  Q
     || | |||||||||||    
T  8447066 ctcgcgttacttattta 8447050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 19200237 - 19200136
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||  ||||||||||||||| ||||||||||||||  ||||||| ||||||||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagtg-agtatcgtatccacaaggattgtcgtttcatccaaacaactcacattactta 19200139  T
Q  346 ttt 348  Q
    |||    
T  19200138 ttt 19200136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 15339234 - 15339310
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  15339234 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttc 15339310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 32085459 - 32085535
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  32085459 ttaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttc 32085535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 433
Target Start/End: Complemental strand, 28770538 - 28770357
Alignment:
Q  254 gtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaa 353  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | | | |||| |||||  ||||||||||||  ||||||||| ||||    
T  28770538 gtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaattcacgctacttatttgggaa 28770439  T
Q  354 caa---caaaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttttgat 433  Q
     ||    |||||||| | ||| ||  ||||||||||||| ||||||||||| ||||| || | ||||||||  ||||||||||    
T  28770438 taaaataaaaataaa-agagaaaagagtttagagttttgcaatttaatttgcttgcaacataacaaagtttacctgttttgat 28770357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 12557819 - 12557733
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaat 325  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | ||||| ||||||| |||||| |||||||||    
T  12557819 ggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattgccgtttcaat 12557733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 25196010 - 25196108
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| || ||||| ||||   |||||||||||| ||||||||||    
T  25196010 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattt 25196108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 12953397 - 12953295
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||||| ||||| || ||||||||||||||||||||    ||||||||| | |||||||    
T  12953397 ttaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttactta 12953298  T
Q  346 ttt 348  Q
    |||    
T  12953297 ttt 12953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 348
Target Start/End: Complemental strand, 45622002 - 45621882
Alignment:
Q  227 ggattattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatc 326  Q
    |||| ||||| ||||||||| ||  |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||   |    
T  45622002 ggataattgatggtcggattaaga-aagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtcc 45621904  T
Q  327 aaacaattcacattacttattt 348  Q
    |||||||||   ||||||||||    
T  45621903 aaacaattcgtgttacttattt 45621882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 25618553 - 25618628
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  25618553 ttaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttc 25618628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 25070119 - 25070233
Alignment:
Q  241 cggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatt 340  Q
    ||||||||| ||||| || ||||||||||| ||| |||||||||| |||||| ||||||| ||||||| ||||||||||| |||  | ||||||||| ||    
T  25070119 cggatttagacaagtatatcaaatcgtttatcaaataataaagtg-taagtagagtatcgcatccacaaggattgtcgttccaactagacaattcacgtt 25070217  T
Q  341 acttatttaggaacaa 356  Q
    |||||||| |||||||    
T  25070218 acttatttgggaacaa 25070233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 45553126 - 45553201
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||  ||| ||||||||||||    
T  45553126 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttt 45553201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 26603453 - 26603351
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||  | |||||||||| ||||   ||||||||| || |||||||    
T  26603453 ttaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttactta 26603354  T
Q  346 ttt 348  Q
    |||    
T  26603353 ttt 26603351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 369
Target Start/End: Complemental strand, 32440112 - 32439977
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| | ||||||||||||||| |||||||||| ||||||||| ||| || ||||||||||||||  ||||| |||||||||| |  |||    
T  32440112 ttgatggtcggattcatgcaagtgtaccaaattgtttaccaagaaataaagtg-taaataaagtatcgtatccacgaggattatcgtttcaattaggcaa 32440014  T
Q  333 ttcacattacttatttaggaacaacaaaataaataaa 369  Q
    ||    ||||||||||  |||||| ||||||||||||    
T  32440013 tttgtgttacttatttgagaacaagaaaataaataaa 32439977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 356
Target Start/End: Original strand, 27418389 - 27418472
Alignment:
Q  273 aagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaa 356  Q
    |||||||||||||||||||| |||||| |||||||||||||| || |||||| ||||||||||   |||||||||| |||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttattttggaacaa 27418472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 17349354 - 17349454
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||||||   |||||| ||| | |||||||    
T  17349354 ttaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttactta 17349451  T
Q  346 ttt 348  Q
    |||    
T  17349452 ttt 17349454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 11382851 - 11382754
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||| ||||||||||||||  ||||||||||||||||| |||||| |||||||||| |||||  |||||  |||| ||||| | ||||||||||    
T  11382851 caagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttattt 11382754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 25885562 - 25885487
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||| | ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||||||||||    
T  25885562 ttaggcgattgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttc 25885487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 31805003 - 31804927
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||  ||||| ||||||    
T  31805003 ttaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttc 31804927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 28925521 - 28925607
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattca 336  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||  | |||||||| ||||||||||||||   |||||||||||    
T  28925521 ggcaagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattca 28925607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 30411679 - 30411750
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||| ||| |||||||| ||||    
T  30411679 caagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttc 30411750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 5777213 - 5777314
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| || |||||||| ||| |||||||||  |||||| ||||||| ||| | |||||||||||||||   |||||||||||| |||||||    
T  5777213 ttaggcaagtgtatcatatcgtttatcaaataataaagtt-taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttactta 5777311  T
Q  346 ttt 348  Q
    |||    
T  5777312 ttt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 5792825 - 5792926
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||| ||||||||||||  ||||||||| ||| ||||||| |||||||||| ||||||||| || ||||   ||||| |||||| |||||||    
T  5792825 ttaggcaagtgtgccaaatcgtttattaagtaataacgtg-taagtatggtatcgtatctacatggattatcatttcgtccaaaccattcacgttactta 5792923  T
Q  346 ttt 348  Q
    |||    
T  5792924 ttt 5792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 356
Target Start/End: Complemental strand, 18554017 - 18553900
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||||||||||||||||||||| |||| | ||| |||||| |||||| |||| || |||||| |||| ||| |||||||| || |||  | |||||||||    
T  18554017 ggtcggatttaggcaagtgtacaaaattggttatcaagtagtaaagt-ataattagagtatcatatctacagggattgtcattccaactagacaattcac 18553919  T
Q  338 attacttatttaggaacaa 356  Q
     ||||||||| ||||||||    
T  18553918 gttacttattcaggaacaa 18553900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 23011864 - 23011791
Alignment:
Q  247 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||| | ||| ||||||||| ||||||||||||    
T  23011864 taggcaagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttt 23011791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 417
Target Start/End: Complemental strand, 30900937 - 30900778
Alignment:
Q  256 gtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta-tttaggaac 354  Q
    ||||||||| ||||||||| |||||||||||||| || ||||| |||||||| |  ||||| |||||    ||||||||| | ||||||| || |||       
T  30900937 gtaccaaattgtttaccaaataataaagtgataactagagtattgtatccacgtatattgttgtttcgtctaaacaattcgcgttacttacttgagg--- 30900841  T
Q  355 aacaaaataaataa-agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaa 417  Q
     ||||||||||||| |||||| |||||||||||||| |||||||| | ||| || |||||||||    
T  30900840 -acaaaataaataagagataagggtttagagttttgcaatttaatctatttacaacagagcaaa 30900778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 25530445 - 25530519
Alignment:
Q  249 ggcaagtgtaccaaatcgtttac--caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| |||||| |  ||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  25530445 ggcaagtgtaccaa-tcgttttcatcaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttc 25530519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 13776335 - 13776436
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||| |||||||||||  || ||||||||||||||||  |||||||||||||||| ||||||| ||||   |||||||  ||| |||||||    
T  13776335 ttagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttactta 13776433  T
Q  346 ttt 348  Q
    |||    
T  13776434 ttt 13776436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 25535296 - 25535346
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttc 25535346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 17635875 - 17635802
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||| |||||||||||||||||||||||| || ||||| || ||| ||||||||  ||||||||||||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttc 17635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 407
Target Start/End: Original strand, 9239156 - 9239301
Alignment:
Q  260 caaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaa 359  Q
    ||||| |||| | |||||||||| ||||||||| |  ||| |||||||||| ||| |||||| || |||| ||||    |||||||||||||||||| ||    
T  9239156 caaattgtttcctaagtaataaaatgataagtagaacatcatatccacatgaattttcgttttaaccaaataattagtgttacttatttaggaacaataa 9239255  T
Q  360 aataaataaagataacggtttagagttttgtaatttaatttgtttgca 407  Q
    ||  ||  ||||||| ||||||||||||   |||||||| ||||||||    
T  9239256 aaataa--aagataaaggtttagagtttaccaatttaatctgtttgca 9239301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 24091003 - 24090927
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||| || | |||||||||||||||||||||| ||||   ||||||||||   ||||||||||    
T  24091003 caagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttattt 24090927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 17889938 - 17890020
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaatt 334  Q
    ||||||||||||||||||||| || ||||| |||| ||||||  ||||| ||| || | ||||||||||||| |||||||||||    
T  17889938 caagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcgatcaaacaatt 17890020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 29883219 - 29883333
Alignment:
Q  245 tttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtata-----gtatcgtatccacatggattgtcgtttcaatcaaacaattcacat 339  Q
    |||| |||||||||| |||| ||||||||||||||||| || |||||| |     ||||| |||||||| | |||||||||||||  | ||||||||| |    
T  29883219 tttacgcaagtgtactaaattgtttaccaagtaataaaatg-taagtaaaatattgtatcatatccacaagaattgtcgtttcaactagacaattcacgt 29883317  T
Q  340 tacttatttaggaaca 355  Q
    |||||||||| |||||    
T  29883318 tacttatttaagaaca 29883333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 9774414 - 9774363
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||| |||||||||||  ||| ||||||||||||||||||||||||||||    
T  9774414 ttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttt 9774363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 348
Target Start/End: Original strand, 29142973 - 29143059
Alignment:
Q  262 aatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||| | |||||||||||  |||||||| |||| |||||||||||||||||||  |||  || |||||||| | ||||||||||    
T  29142973 aatcgttaatcaagtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttattt 29143059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 17675730 - 17675657
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||| |||||||||||||||||||||||| || ||||| || ||| |||| |||  ||||||||||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttc 17675657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 19287438 - 19287485
Alignment:
Q  358 aaaataaataaagataacggtttagagttttgtaatttaatttgtttg 405  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||||||    
T  19287438 aaaaaaaaaaaagatacgggtttagagttttgtaatttaatttgtttg 19287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 20173400 - 20173348
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatc 299  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||| | ||||||    
T  20173400 ttaggaaagtgtaccaaatcgtt-accaagttataaagtgataagcagagtatc 20173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 25920303 - 25920364
Alignment:
Q  287 taagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||| |||||||||||||||||||||||| ||||   | |||||||| | ||||||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttattt 25920364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 25936905 - 25936981
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatg 310  Q
    |||| ||| |||||||| | ||||||||| ||||||||  ||||||||||||| |||||| || ||| ||||||||||    
T  25936905 ttgatggttggatttagactagtgtaccacatcgtttattaagtaataaagtg-taagtagagaatcatatccacatg 25936981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 29027507 - 29027567
Alignment:
Q  261 aaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||||||||| |||||||||||| || | ||||| |||| |||||| ||||| ||||    
T  29027507 aaatcgtttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttt 29027567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 246 - 407
Target Start/End: Original strand, 10917914 - 10918077
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    ||||| ||| |||||| ||    
T  10917914 ttaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattaccta 10918013  T
Q  346 tttaggaacaacaaaataaataaag--ataacggtttagagttttgtaatttaatttgtttgca 407  Q
    ||| |||| || |||||||||||||  |||| |||||| ||| ||| |||||||| || |||||    
T  10918014 tttgggaaaaataaaataaataaagatataagggtttaaagtcttgcaatttaatctgcttgca 10918077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 238 - 365
Target Start/End: Original strand, 12759375 - 12759502
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||| ||| | |    
T  12759375 ggtctgatttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttcaaacaaaaaatccgc 12759474  T
Q  338 attacttatttaggaacaacaaaataaa 365  Q
     |||||||||| ||||||| ||||||||    
T  12759475 tttacttatttgggaacaataaaataaa 12759502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 821606 - 821439
Alignment:
Q  257 taccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaa 356  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    ||||||||||  |||||||||| |||||||    
T  821606 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttatttgggaacaa 821507  T
Q  357 caaaa-taaataaaga--taacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
       || ||||||||||  |||  ||||||||||||  |||||||| |||||||| ||||| |||||||    
T  821506 attaagtaaataaagagataaaagtttagagtttttcaatttaatatgtttgcaacagagaaaagttt 821439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 233 - 348
Target Start/End: Complemental strand, 12806005 - 12805891
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||    
T  12806005 ttgatggtcggatt-aggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaa 12805907  T
Q  333 ttcacattacttattt 348  Q
    ||  | ||||||||||    
T  12805906 tttgcgttacttattt 12805891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 21301914 - 21302016
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||   ||||||||||   |||||||    
T  21301914 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttactta 21302013  T
Q  346 ttt 348  Q
    |||    
T  21302014 ttt 21302016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 238 - 356
Target Start/End: Original strand, 28728932 - 28729050
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||||||||||||||||||  |||||  |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| |    
T  28728932 ggtcggatttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgc 28729031  T
Q  338 attacttatttaggaacaa 356  Q
     |||||| ||| |||||||    
T  28729032 gttacttgtttgggaacaa 28729050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 22349410 - 22349507
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||   |||||||||||||||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattt 22349507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 420
Target Start/End: Original strand, 6289899 - 6290073
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||    | ||||||| |||||||||    
T  6289899 ttaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtgtagacaattcgcattactta 6289998  T
Q  346 tttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    ||| ||||||| | |||||||||  |||||  |||||||| ||||  |||||| | |||||||| ||||||||||||    
T  6289999 ttt-ggaacaaaataataaataaagagatagtggtttaga-tttttcaatttattctgtttgcaacagagcaaagtt 6290073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 267 - 405
Target Start/End: Complemental strand, 8557211 - 8557072
Alignment:
Q  267 tttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaac--aacaaaataa 364  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||  | |||||||||| |||||  || |||||||    
T  8557211 tttaccgagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttatttgggaacaaaataaaataa 8557112  T
Q  365 ataaagataacggtttagagttttgtaatttaatttgtttg 405  Q
    | || ||||| |||||||||||||| ||| |||| ||||||    
T  8557111 a-aaggataagggtttagagttttgcaatataatatgtttg 8557072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 2167719 - 2167618
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  | |||||||||   ||||||||||||||||||||    
T  2167719 ttagacaagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattactta 2167621  T
Q  346 ttt 348  Q
    |||    
T  2167620 ttt 2167618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 3116521 - 3116420
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||   |||||||||||| |||||||    
T  3116521 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactta 3116423  T
Q  346 ttt 348  Q
    |||    
T  3116422 ttt 3116420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 10744898 - 10745000
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||||||||    |||||| |||||||| |||    
T  10744898 ttaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaatta 10744997  T
Q  346 ttt 348  Q
    |||    
T  10744998 ttt 10745000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 16245832 - 16245730
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||   |||||||||| | |||||||    
T  16245832 ttagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttactta 16245733  T
Q  346 ttt 348  Q
    |||    
T  16245732 ttt 16245730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 433
Target Start/End: Original strand, 7147972 - 7148172
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||| ||||   ||||||| |||||||| ||||||||||||||||||||||   ||| |    
T  7147972 ttgatggtcggatt-aggcaaatgtaccaaatcgtttaccaagtactaaaaa-ataagtagagtatcgtctccacatggattgtcgtttcaacagaacga 7148069  T
Q  333 ttcacattacttatttaggaac--aacaaaataaataaagataacggtttagag-ttttgtaatttaatttgtttgcagcagagcaaagtttgtctgttt 429  Q
    ||||| |||||||||| |||||  || |||||||| | ||||||  ||| |||| ||||  || |||||||||||||| ||| ||| |||||  ||||||    
T  7148070 ttcacgttacttatttgggaacaaaataaaataaa-agagataagagttcagagtttttcaaagttaatttgtttgcaacagtgcatagtttacctgttt 7148168  T
Q  430 tgat 433  Q
    ||||    
T  7148169 tgat 7148172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 348
Target Start/End: Original strand, 12411149 - 12411249
Alignment:
Q  248 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatt 347  Q
    ||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||   ||||||||| |  |||||||||    
T  12411149 aggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttatt 12411248  T
Q  348 t 348  Q
    |    
T  12411249 t 12411249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 17438527 - 17438432
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||   |||||||||||| ||||||||||    
T  17438527 aagtgtaccaaatcgtt-accaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttattt 17438432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 21325336 - 21325412
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||   |||||||||||    
T  21325336 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttc 21325412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 19908307 - 19908394
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| || | ||||||||   ||||||||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcac 19908394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 4650231 - 4650328
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatt 347  Q
    |||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||   |||||||||| | |||||||||    
T  4650231 ggcaagtgtaccaa-tcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 20397674 - 20397767
Alignment:
Q  339 ttacttatttaggaacaacaaaataaataaaga--taacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtttgtctgtttt 430  Q
    |||||||||| ||||||| ||||||||||||||  ||| |||||||||||||| ||||||||||||||||| ||||||||| |||  |||||||    
T  20397674 ttacttatttgggaacaataaaataaataaagagataatggtttagagttttgcaatttaatttgtttgcaacagagcaaaatttacctgtttt 20397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 21825971 - 21825870
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| | |||||   |||||| ||| | |||||||    
T  21825971 ttaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttactta 21825873  T
Q  346 ttt 348  Q
    |||    
T  21825872 ttt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 5508332 - 5508407
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||  |||||  ||||||||||||||||||||||    
T  5508332 ttaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttc 5508407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 8770019 - 8770086
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtc 8770086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 20429694 - 20429808
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| ||||| |||||| |||| ||||||||||||||||| ||||||||| ||||||||||| | | |||||||| |||||  || ||||    
T  20429694 ttgatggtcggatt-aggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaa 20429792  T
Q  333 ttcacattacttattt 348  Q
    ||| | ||||||||||    
T  20429793 ttcgcgttacttattt 20429808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 8319036 - 8319137
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||| | ||| ||||||||| ||||| |||||||   |||||||||||  |||||||    
T  8319036 ttaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttactta 8319134  T
Q  346 ttt 348  Q
    |||    
T  8319135 ttt 8319137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 10923150 - 10923220
Alignment:
Q  253 agtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||  ||||||| ||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttca 10923220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 18458527 - 18458465
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 308  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  18458527 ttagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 19171937 - 19171835
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||| | || ||| ||| |||| |||||||||||||   |||||||||  |||||||||    
T  19171937 ttaggcaagtatactaaattgtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattactta 19171838  T
Q  346 ttt 348  Q
    |||    
T  19171837 ttt 19171835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 21303453 - 21303355
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||| |||||  |||||| ||||||  |||||||||  | ||||||||||    
T  21303453 gcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattt 21303355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 41508363 - 41508465
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||  |  ||||||||||||    |||||||||  |||||||||    
T  41508363 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattactta 41508462  T
Q  346 ttt 348  Q
    |||    
T  41508463 ttt 41508465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 8765117 - 8765184
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||| ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  8765117 ggcaggtgtaccaa-tcgttaaccaattaataaagtgataagtaaagtatcgtatccacatggattgtc 8765184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 932742 - 932840
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||| ||| |||||||| |||||||||| |||||| || |||||||||||||||  ||||||| ||||   |||| ||||||||||||||||||    
T  932742 ggcaagtgtatcaa-tcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttattt 932840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 369
Target Start/End: Complemental strand, 21019702 - 21019577
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    ||||||||||||  |||||||||| | |||||||||||||||| ||||||| |||||| |||||||| ||||||||||| |||  |   || |||| |||    
T  21019702 ggatttaggcaacagtaccaaatcatctaccaagtaataaagt-ataagtagagtatcttatccacaaggattgtcgttccaactaggtaagtcac-tta 21019605  T
Q  342 cttatttaggaacaacaaaataaataaa 369  Q
    ||||||| || |||| ||||||||||||    
T  21019604 cttatttgggtacaagaaaataaataaa 21019577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 27543025 - 27542948
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    ||||| ||||||  ||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||    
T  27543025 ggtcgaatttagataagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccacatgaattgt 27542948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 13908328 - 13908252
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||| |||||| |||||| | ||||| ||||||||    
T  13908328 ttaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagtagagtatcatatccatagggattatcgtttca 13908252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 355
Target Start/End: Complemental strand, 20339870 - 20339758
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    ||||||||| |||| || ||||||||||||||||||||||| || |||||| |||||||||| ||||||  |||| ||||||| ||  ||||| |  |||    
T  20339870 ggatttagggaagtatatcaaatcgtttaccaagtaataaaatg-taagtagagtatcgtattcacatgtgttgttgtttcaaccaggcaattgatgtta 20339772  T
Q  342 cttatttaggaaca 355  Q
    |||||||| |||||    
T  20339771 cttatttaagaaca 20339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 8889229 - 8889153
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||| ||||  || |||||||| | ||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttattt 8889153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 18736774 - 18736699
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| |  ||||||||||    
T  18736774 ttagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttc 18736699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 21083305 - 21083380
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    ||||||||||||||| ||||||||| ||||| ||||||| ||| ||||| |||||||||||||||| |||| |||||    
T  21083305 atttaggcaagtgtaacaaatcgtt-accaaataataaaatgacaagtaaagtatcgtatccacatagattttcgtt 21083380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 365
Target Start/End: Complemental strand, 21074644 - 21074522
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    ||||||| |||| ||||||||||| | || |||||||||||||| |||||| ||||||||||||||  | ||||||||| |||  |   ||||||| |||    
T  21074644 ggatttatgcaactgtaccaaatcatctatcaagtaataaagtg-taagtagagtatcgtatccaccagaattgtcgttccaactatgtaattcacgtta 21074546  T
Q  342 cttatttaggaacaacaaaataaa 365  Q
    |||| || ||||||| ||||||||    
T  21074545 cttacttgggaacaagaaaataaa 21074522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 8143611 - 8143711
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| |||||||||||||||||||| ||| ||||||||| |||||| ||||| |||||||| | |||| ||||||||  ||||||| || | |||||||    
T  8143611 ttaggtaagtgtaccaaatcgtttactaagcaataaagtg-taagtagagtattgtatccacgt-gattctcgtttcatccaaacaactcgctttactta 8143708  T
Q  346 ttt 348  Q
    |||    
T  8143709 ttt 8143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 11518060 - 11518002
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 308  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | |||| ||||||||    
T  11518060 gcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatccaca 11518002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 25756663 - 25756733
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 308  Q
    |||||||||||||||||||||| ||||| |||| ||| ||||||||   |||||| |||||||||||||||    
T  25756663 ggtcggatttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtatccaca 25756733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 31286117 - 31286048
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgt 316  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||| || | ||||||||||||| |||||||    
T  31286117 ttagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt 31286048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 19925701 - 19925624
Alignment:
Q  271 ccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||| ||||   |||| ||||| | ||||||||||    
T  19925701 ccaagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttattt 19925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 7478431 - 7478336
Alignment:
Q  248 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatt 347  Q
    ||||||||||||||||  ||||||||| ||||||||||||      | |||||||||||||| |||||||||||    |||||||||||| |||||||||    
T  7478431 aggcaagtgtaccaaactgtttaccaaataataaagtgat-----gactatcgtatccacattgattgtcgtttggtccaaacaattcacgttacttatt 7478337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 11533073 - 11533017
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccac 307  Q
    ||||||||||||| | |||||||| ||||||||||||||||| |||| |||||||||    
T  11533073 caagtgtaccaaaacatttaccaaataataaagtgataagtagagtaccgtatccac 11533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 19706905 - 19706831
Alignment:
Q  239 gtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    |||| ||||| ||||||||| ||||| ||||||||| |||||||| | |||||| |||||| ||||||||||||||    
T  19706905 gtcgaatttaagcaagtgtatcaaattgtttaccaaataataaagag-taagtaaagtatcatatccacatggatt 19706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 23056281 - 23056203
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||| ||||| |||||  ||||||||||||| |||| |||||    
T  23056281 ggtcgaatttatgcaagtgtatcaaaacgtttaccaagtaatgaagtg-taagttgagtatcgtatccatatgggttgtc 23056203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 12752201 - 12752242
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 285  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  12752201 atttagccaagtgtaccaaatcgtttaccaagtaatgaagtg 12752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 277
Target Start/End: Original strand, 22245346 - 22245377
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagta 277  Q
    ||||||||||||||||||||||||||||||||    
T  22245346 ttaggcaagtgtaccaaatcgtttaccaagta 22245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 51119347 - 51119293
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatc 299  Q
    ||||| ||||||||| ||||||||| ||||| ||||||||||||||||| ||||||    
T  51119347 atttatgcaagtgtatcaaatcgtt-accaaataataaagtgataagtaaagtatc 51119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 20397543 - 20397616
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    ||||| || ||||| ||||| ||||| ||||||||| ||||| |||| | ||||||||||||| |||||||||||    
T  20397543 ttaggaaaatgtactaaatcatttacaaagtaataa-gtgatcagtagaatatcgtatccacaaggattgtcgtt 20397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 8445846 - 8445894
Alignment:
Q  273 aagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||| |||||| ||||| || ||||||||||||||||||||    
T  8445846 aagtaataaagtg-taagtagagtattgtgtccacatggattgtcgtttc 8445894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 16230019 - 16229974
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||    
T  16230019 caagtaataaagtagtaagtagagtatcgtatccacagggattgtc 16229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 9e-34; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 17610354 - 17610257
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||   |||||||||||| ||||||||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattt 17610257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 233 - 420
Target Start/End: Original strand, 17837501 - 17837687
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||| |||||||| |||     ||||||    
T  17837501 ttgatggtcggatt-aggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaa 17837599  T
Q  333 ttcacattacttatttaggaacaacaaaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    ||| | |||||||||| ||||||| | || | | | |||||| || ||||||||||| |||||||| ||||||||  |||||||||||    
T  17837600 ttcgcgttacttatttgggaacaaaataaaataaagagataagggcttagagttttgcaatttaatatgtttgcaatagagcaaagtt 17837687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 238 - 407
Target Start/End: Complemental strand, 24306415 - 24306245
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||| ||||| |    
T  24306415 ggtcggattt-ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgc 24306318  T
Q  338 attacttatttaggaacaacaaaataaataaagataac-ggtttagagttttgt--aatttaatttgtttgca 407  Q
     ||||||||||  |||||| ||||  || | ||||||| |||||||| |||| |  ||||| |||||||||||    
T  24306317 gttacttatttgagaacaataaaaataaaagagataacgggtttagattttttttcaattttatttgtttgca 24306245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 248 - 348
Target Start/End: Original strand, 21449087 - 21449187
Alignment:
Q  248 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatt 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||| |  |||||||||    
T  21449087 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttatt 21449186  T
Q  348 t 348  Q
    |    
T  21449187 t 21449187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 25405730 - 25405631
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||   |||||| ||||| ||||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 417
Target Start/End: Complemental strand, 24267885 - 24267712
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||| |||||| |||| ||||||||||| |||||||||||||||| |||||| || |||||| |||||    || |||||||| |||||||    
T  24267885 ttagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatccatatagattgttgtttcgtctaatcaattcacgttactta 24267786  T
Q  346 tttagga--acaacaaaataaataaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaa 417  Q
    ||| |||  | || |||||||| ||||| || |||||||||||||| |||||||| |||||||| |||||||||    
T  24267785 tttgggattaaaataaaataaaaaaagacaagggtttagagttttgcaatttaatatgtttgcaacagagcaaa 24267712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 249 - 349
Target Start/End: Complemental strand, 13345436 - 13345336
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    |||||||||| | ||||||||||    
T  13345436 ggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 13345337  T
Q  349 a 349  Q
    |    
T  13345336 a 13345336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 21847630 - 21847729
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||   |||||||||||| |||||||    
T  21847630 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttactta 21847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 23038114 - 23038039
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  23038114 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttc 23038039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 27117833 - 27117734
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||||||    
T  27117833 ttgatggtcggatt-aggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaa 27117735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 12208600 - 12208699
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||   |||||||||| | ||||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattt 12208699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 18736340 - 18736241
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||  ||||||||||  | ||||||||||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattt 18736241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 26540884 - 26540959
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  26540884 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggatt 26540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 3591756 - 3591654
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||| |||||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||    |||||||||| | |||||||    
T  3591756 ttaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttactta 3591657  T
Q  346 ttt 348  Q
    |||    
T  3591656 ttt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 15544066 - 15543967
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    |||||||||||   ||||||||||   ||||||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 24281273 - 24281348
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||    
T  24281273 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttt 24281348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 29242518 - 29242617
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |  |||||||||||||  |||||||||| | |||| |||||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 17359158 - 17359260
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| |  ||||||||||||   |||| ||||| | |||||||    
T  17359158 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttactta 17359257  T
Q  346 ttt 348  Q
    |||    
T  17359258 ttt 17359260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 16359867 - 16359943
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||    
T  16359867 ttaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccacatgtactgtcgtttca 16359943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 9787982 - 9787906
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||    
T  9787982 ttaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttc 9787906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 21666693 - 21666609
Alignment:
Q  264 tcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||   |||||||||| | ||||||||||    
T  21666693 tcgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttattt 21666609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 12012903 - 12012828
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||| ||||| ||||||||||| ||||||||||    
T  12012903 ttaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttt 12012828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 14779543 - 14779637
Alignment:
Q  227 ggattattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||| |||||||| | ||||||||||||||||| ||||||||||||||| ||||||| || |||||| |||||||| |||||||||||||    
T  14779543 ggatgattgatggtcggatat-ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttc 14779637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 368
Target Start/End: Complemental strand, 16787829 - 16787707
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||| | | ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||    |||||||||  | |||||||    
T  16787829 ttaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttactta 16787730  T
Q  346 tttaggaacaacaaaataaataa 368  Q
    |||  |||||| |||||| ||||    
T  16787729 tttttgaacaataaaatatataa 16787707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 365
Target Start/End: Original strand, 33712645 - 33712778
Alignment:
Q  231 tattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaac 330  Q
    |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||| ||||  | |   ||||||||| |||  |       
T  33712645 tattgatggtcggatttaggcaagtgtaccaaatc-tttaccaaataataaagtgataattataatattgtatttagagttattgtcgttccaactagga 33712743  T
Q  331 aattcacattacttatttaggaacaacaaaataaa 365  Q
    ||||| |||||||||||||||||||| ||||||||    
T  33712744 aattcgcattacttatttaggaacaagaaaataaa 33712778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 22664202 - 22664263
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccac 307  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22664202 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccac 22664263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 51473977 - 51473904
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||| || ||||||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  51473977 ttaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatccatatggattgtcgttt 51473904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 25958102 - 25958219
Alignment:
Q  243 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattac 342  Q
    |||||||| |||||||  ||||||||||| ||||||| ||||| ||| || |||||| |||||||||||||||||||| ||| || |||||| |  ||||    
T  25958102 gatttaggaaagtgtattaaatcgtttacaaagtaatgaagtg-taaatagagtatcatatccacatggattgtcgttccaaccagacaatttatgttac 25958200  T
Q  343 ttatttaggaacaacaaaa 361  Q
    |||||| ||||||| ||||    
T  25958201 ttatttgggaacaataaaa 25958219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 32383101 - 32383047
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  32383101 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 348
Target Start/End: Original strand, 9401511 - 9401603
Alignment:
Q  253 agtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||| |||||||| ||||||||||   ||||| ||||||||||||||||| |||||||||||   |||||||||| | ||||||||||    
T  9401511 agtgtaccaaatagtttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttattt 9401603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 15813271 - 15813184
Alignment:
Q  231 tattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtt 320  Q
    |||||| ||||||||| ||||||||||||||||||||||| || |||||||||||||||||  | ||||||||||||| ||||| |||||    
T  15813271 tattgatggtcggatt-aggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgtt 15813184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 18825655 - 18825722
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| || |||||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccacaagggttgtc 18825722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 21988082 - 21988026
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcc 305  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcc 21988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 44795365 - 44795440
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||||||| || | ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  44795365 ttagacaagtgtaccgaagcatttaccaagtaataaagagataagtg-agtatcgtatccacatggattgtcgtttc 44795440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 15813628 - 15813525
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgat-aagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactt 344  Q
    |||| |||||||||||||||||||| |||  ||||||||||| ||||| ||||| ||||||||| |||||||||||||  | |||||||||   ||||||    
T  15813628 ttagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgttactt 15813529  T
Q  345 attt 348  Q
    ||||    
T  15813528 attt 15813525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 348
Target Start/End: Original strand, 16179010 - 16179105
Alignment:
Q  253 agtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| | |||  ||||||||   ||||||||||   ||||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttattt 16179105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 21334819 - 21334720
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||||||||||||||  | | |||||| ||||   |||||||||| | ||||||||||    
T  21334819 ggcaaatgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttattt 21334720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 430
Target Start/End: Complemental strand, 6501580 - 6501470
Alignment:
Q  321 tcaatcaaacaattcacattacttatttaggaacaacaaaataaataaagat-aacggtttagagttttgtaatttaatttgtttgcagcagagcaaagt 419  Q
    |||| ||||||||||||  ||||||||| ||| ||| ||||||||||||||| || |||||||||||||| |||||||| | |||| | || ||||||||    
T  6501580 tcaaccaaacaattcacgatacttatttgggagcaataaaataaataaagatgaagggtttagagttttgcaatttaatctatttgaaacatagcaaagt 6501481  T
Q  420 ttgtctgtttt 430  Q
    ||  |||||||    
T  6501480 ttagctgtttt 6501470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 24214558 - 24214616
Alignment:
Q  264 tcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||    
T  24214558 tcgtttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttc 24214616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 33190657 - 33190750
Alignment:
Q  229 attattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    |||||||| ||||||||| || || ||||||||||||||||| ||||||||||| ||||||||| |||||  ||||||||   ||||||||||||    
T  33190657 attattgatggtcggatt-agacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttca 33190750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 147627 - 147703
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||||| ||||||||||  ||||||||||||||||||||  |||||| ||| ||||||||||||| ||||    
T  147627 ttagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcacatggattgtcatttc 147703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 26649073 - 26648998
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||  | ||| ||||||||||||||| |||||||    
T  26649073 ttagacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttc 26648998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 16069650 - 16069578
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| | ||| ||||||||||||||||||||||| | |||| ||| |||| |||||||||||||    
T  16069650 ggcaagtgtaccaatt-gttaaccaagtaataaagtgataagtaaaatatcatatacacagggattgtcgtttc 16069578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 365
Target Start/End: Original strand, 22620258 - 22620377
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| |||||  ||||  ||||||||||||||||| || ||||||||||||| | | |||||| ||||    ||| ||||||| |||||||    
T  22620258 ttaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttactta 22620357  T
Q  346 tttaggaacaacaaaataaa 365  Q
    |||   ||||| ||||||||    
T  22620358 tttttaaacaataaaataaa 22620377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 24307028 - 24306950
Alignment:
Q  276 taataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaaca 355  Q
    |||||||||| |||||| |||||||||| || | |||||||||||||||  || |||||||| |||||||||| ||||||    
T  24307028 taataaagtg-taagtagagtatcgtattcatagggattgtcgtttcaactaagcaattcacgttacttatttgggaaca 24306950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 34480965 - 34481011
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 292  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  34480965 ttagacaaatgtacaaaatcgtttaccaagtaataaagtgataagta 34481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 10064668 - 10064564
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttag 350  Q
    |||||||||||||||||||||||||||||||| ||  | ||| | |||| |||||||| ||||| |||||  ||  |  |||||| ||||||||||| ||    
T  10064668 caagtgtaccaaatcgtttaccaagtaataaaatg-caggtagaatatcatatccacaaggattttcgttcaaactaggcaattctcattacttattaag 10064570  T
Q  351 gaacaa 356  Q
    ||||||    
T  10064569 gaacaa 10064564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 28008101 - 28008158
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 303  Q
    |||| ||| |||| |||||||||||| |||||||||||| ||||| ||||||||||||    
T  28008101 ttagacaaatgtatcaaatcgtttactaagtaataaagttataagaatagtatcgtat 28008158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 31236145 - 31236076
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||||||| |||||||||| |||||||||||||||||| | |||||  |||| |||  |||||||||||    
T  31236145 aagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttt 31236076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 18830481 - 18830579
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| | ||| ||||||||| |||||||||  || | ||||||||||||| |||||||| ||||   ||||||||||   ||||||||||    
T  18830481 ggcaagtgtaccaa-tggttgaccaagtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaattctttttacttattt 18830579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 22622892 - 22622962
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||| ||||| |||||||||||||||||| |||| |||||| |||||  | |||||||| ||||    
T  22622892 caagtgtaccaa-tcgttgaccaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttc 22622962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 727489 - 727531
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccacaaggatt 727531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 16917016 - 16916934
Alignment:
Q  267 tttaccaagtaataaagtga-taagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||| ||||||||||||| | |||||| ||||||||||||||| |||||||| ||||   | |||||||| | ||||||||||    
T  16917016 tttatcaagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttattt 16916934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 15808106 - 15808046
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatg 310  Q
    |||||||||  ||||| |||| |||||| ||||||| ||||||||||||| ||| ||||||    
T  15808106 gcaagtgtattaaatcatttatcaagtagtaaagtggtaagtatagtatcatatacacatg 15808046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 17121582 - 17121523
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcca 306  Q
    |||| |||||||| ||||| ||||| |||||||||||||| |||||| |||||| ||||||    
T  17121582 ttagacaagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatcca 17121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 420
Target Start/End: Complemental strand, 24852275 - 24852098
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    ||||||||||| |||||||    
T  24852275 ttaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttactta 24852176  T
Q  346 tttaggaacaacaaaataaa--taaagataacggtttagagtttt-gtaatttaatttgtttgcagcagagcaaagtt 420  Q
    |||  |||||| |  |||||   |||||||| |||||| |||||| | || ||||| |||||||| ||||||||||||    
T  24852175 tttgagaacaaaattataaaataaaagataagggtttaaagttttggaaagttaatctgtttgcaacagagcaaagtt 24852098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 420
Target Start/End: Complemental strand, 19086276 - 19086105
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaa-caattcacattacttatttag 350  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||| ||||| ||||   ||||| |||||||  |||||||||       
T  19086276 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttt-tgtcaaatcaattcatgttacttattgga 19086178  T
Q  351 gaacaacaaaataaataa--agataacggtttagagttttgtaat-ttaatttgtttgcagcagagcaaagtt 420  Q
    |||||| || ||||||||  |||||| |||||||||||||| ||| |||||||||||||| ||||||||||||    
T  19086177 gaacaaaaatataaataaagagataagggtttagagttttggaatgttaatttgtttgcaacagagcaaagtt 19086105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 241 - 353
Target Start/End: Original strand, 17185454 - 17185566
Alignment:
Q  241 cggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatt 340  Q
    ||||||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| ||    
T  17185454 cggatttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgtt 17185553  T
Q  341 acttatttaggaa 353  Q
    || ||||| ||||    
T  17185554 acgtatttgggaa 17185566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 417
Target Start/End: Original strand, 15544032 - 15544218
Alignment:
Q  231 tattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaac 330  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||| || | ||||| |||||  ||  |  |    
T  15544032 tattgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaactg-tcagtagagtatcgtatacatagggattatcgttcaaactaggc 15544130  T
Q  331 aattcacattacttatttaggaacaacaaaataaat-aaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaa 417  Q
    ||| | | |||||||||| | ||||| ||||||||| ||||||||   |||||||||||| ||||||||||||||||| || ||||||    
T  15544131 aatccgcgttacttatttggaaacaataaaataaataaaagataagtatttagagttttgcaatttaatttgtttgcaacatagcaaa 15544218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 233 - 348
Target Start/End: Complemental strand, 18208363 - 18208250
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||   |||||||    
T  18208363 ttgatggtcggatt-aggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaa 18208266  T
Q  333 ttcacattacttattt 348  Q
    ||||  ||||||||||    
T  18208265 ttcatgttacttattt 18208250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 19004326 - 19004227
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||    |||||||||||| ||||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttattt 19004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 15469932 - 15470008
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||    
T  15469932 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttc 15470008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 421
Target Start/End: Complemental strand, 29263691 - 29263508
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    ||||| |||||| |||||||  || ||  |||||||||||||||| |||||| || |  |||||||| |||||||||||||||| || |||||||||||     
T  29263691 ggtcgaatttagacaagtgtgtcatattatttaccaagtaataaaatgataattagac-atcgtatctacatggattgtcgttttaaccaaacaattcat 29263593  T
Q  338 attacttatttaggaacaacaaaataaataaagata-acggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
     |||||||||| ||||||| ||||  || | ||||| | |||||||||||||| |||||||| |||||||| || ||||||||||    
T  29263592 gttacttatttgggaacaataaaaataaaagagatataaggtttagagttttgcaatttaatatgtttgcaacaaagcaaagttt 29263508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 238 - 348
Target Start/End: Complemental strand, 15375993 - 15375883
Alignment:
Q  238 ggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcac 337  Q
    |||||||||  |||||||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||| |||||||||||||   |||| ||||  |    
T  15375993 ggtcggattatggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgc 15375894  T
Q  338 attacttattt 348  Q
    |||||||||||    
T  15375893 attacttattt 15375883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 230 - 324
Target Start/End: Complemental strand, 23380376 - 23380282
Alignment:
Q  230 ttattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaa 324  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||| || |||||||||| ||||||    
T  23380376 ttattgattgtcggatttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaa 23380282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 25550607 - 25550505
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||   ||||||||||   |||||||    
T  25550607 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttactta 25550508  T
Q  346 ttt 348  Q
    |||    
T  25550507 ttt 25550505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 18937730 - 18937845
Alignment:
Q  231 tattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaac 330  Q
    |||||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||| || | ||||||| |||||   |||||    
T  18937730 tattgatggtcggatt-aggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaac 18937827  T
Q  331 aattcacattacttattt 348  Q
    ||||||| ||||||||||    
T  18937828 aattcacgttacttattt 18937845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 17171656 - 17171580
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  17171656 ttaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttc 17171580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 17431884 - 17431981
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||||  |||||||||||||  ||||||| ||||  |||||||||    
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttattt 17431981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 24267057 - 24266990
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  24267057 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggatt 24266990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 24343688 - 24343621
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  24343688 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggatt 24343621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 20315529 - 20315431
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||   |||||||||| | | ||||||||    
T  20315529 ggcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattt 20315431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 22755517 - 22755619
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||| |||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||| | |||||||||||||   |||||||||  ||||| |||    
T  22755517 ttagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattattta 22755616  T
Q  346 ttt 348  Q
    |||    
T  22755617 ttt 22755619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 23265176 - 23265265
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaaa 361  Q
    ||||| ||||||||||||||| | ||||||||||| ||||||| || |||||| |||||||||||| |||||||||| ||||||| ||||    
T  23265176 caagtgataaagtgataagtaaaatatcgtatccatatggattttcatttcaaccaaacaattcacgttacttatttgggaacaataaaa 23265265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 24245642 - 24245545
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||  ||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||| || | ||||||||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttattt 24245545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 25402440 - 25402364
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||| |||| ||||||||  |||||||||||| ||||| ||||||||| |||||||||||||    
T  25402440 ttaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttc 25402364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 365
Target Start/End: Original strand, 28253264 - 28253395
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| | |||||||| |||| ||||| ||||| |||  |   ||    
T  28253264 ttgatggtcggatttatgcaaatgtaccaaatcgtttaccaagtaataaagtg-taagtagaatatcgtattcacagggattatcgttccaagtaggaaa 28253362  T
Q  333 ttcacattacttatttaggaacaacaaaataaa 365  Q
    ||| | ||||||||||  ||||||| |||||||    
T  28253363 ttcgcgttacttatttgagaacaactaaataaa 28253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 34487640 - 34487735
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||| |||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||    ||||||||| | ||||||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattt 34487735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 23388935 - 23388865
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  23388935 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttc 23388865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 24140442 - 24140540
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||| ||||   |||||||||| | |||| |||||    
T  24140442 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattt 24140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 15690774 - 15690875
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||   ||| |||||| | |||||||    
T  15690774 ttaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttactta 15690872  T
Q  346 ttt 348  Q
    |||    
T  15690873 ttt 15690875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 39434464 - 39434560
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |  ||||||||||||||||||||| |||    |||||||||| | ||||||||||    
T  39434464 caagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattt 39434560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 26307593 - 26307666
Alignment:
Q  239 gtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggatt 314  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||  ||||||| ||||||||||||||| ||||    
T  26307593 gtcggatttaggcaagtgtaccaaattgtttattaagtaataaagt--taagtatcgtatcgtatccacattgatt 26307666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 17315182 - 17315127
Alignment:
Q  267 tttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  17315182 tttatcaagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttc 17315127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 365
Target Start/End: Original strand, 26120861 - 26120979
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||||||||||||| |||||||| ||||||||||  |||||| |||||| ||| || | |||||||||||||   |||||||||  |||||||||    
T  26120861 ttaggaaagtgtaccaaattgtttaccatgtaataaagt-ttaagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattactta 26120959  T
Q  346 tttaggaacaacaaaataaa 365  Q
    |||  |||||| ||||||||    
T  26120960 tttttgaacaataaaataaa 26120979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 36175135 - 36175205
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||| | |||||||||||||    
T  36175135 caagtgtaccaaatcgtttaccaagtaataaagtg-tttgtagagtatcgtatccataaggattgtcgtttc 36175205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 17769511 - 17769461
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaag 283  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17769511 ttgatggtcggatttatgcaagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 420
Target Start/End: Original strand, 28142347 - 28142537
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagt-atcgtatccacatggattgtcgtttcaatcaaaca 331  Q
    |||| ||||| ||||| |||||||||  |||||||||| ||| |||||||||  |||| | ||| ||||||| |||||||||||||||| |||  |  ||    
T  28142347 ttgatggtcgaatttaagcaagtgtattaaatcgtttatcaaataataaagtagtaagcagagttatcgtattcacatggattgtcgttccaactatgca 28142446  T
Q  332 attcacattacttatttaggaacaaca-aaataaat-aaagataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    |||    |||||||||| ||||||| | |||||||| |||||||  |||||||||| ||| |||||||| | |||||| ||||| ||||||    
T  28142447 atttgtgttacttatttgggaacaatataaataaataaaagatatgggtttagagtgttgcaatttaatctatttgcaacagagtaaagtt 28142537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 32417471 - 32417382
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    |||| ||||| ||||||| ||||||||||||||||||| |||||||||||||| |||||| |||||  |||| |||||||||  |||||||    
T  32417471 ttgatggtcgaatttaggtaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtattatatcgacatggatttacgtttca 32417382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 26121426 - 26121350
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||| ||||| ||||||||| ||||| | ||||||    
T  26121426 ttaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagggatttttgtttca 26121350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 34128636 - 34128708
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||| | |||||| ||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttc 34128708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 24167687 - 24167611
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||| |||||||  ||||||||||||||||||||||||  |||||| |||||| |||  |||||||||||||||||    
T  24167687 ttaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttc 24167611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 20419952 - 20419995
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 289  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  20419952 ttaggtaagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 19283958 - 19283896
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 308  Q
    ||||| ||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  19283958 ttaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccaca 19283896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 19051551 - 19051604
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatcc 305  Q
    |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||    
T  19051551 aagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc 19051604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 349
Target Start/End: Complemental strand, 23014713 - 23014610
Alignment:
Q  244 atttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattact 343  Q
    ||||||||||||||| ||||| | ||| ||| ||||||||||||||||| ||||| ||||||  | |||||||||||||||  |  |||||||| |||||    
T  23014713 atttaggcaagtgtatcaaat-gattatcaaataataaagtgataagtagagtattgtatcc-taaggattgtcgtttcaactaggcaattcacgttact 23014616  T
Q  344 tattta 349  Q
    ||||||    
T  23014615 tattta 23014610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 349
Target Start/End: Complemental strand, 27921516 - 27921402
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaa 332  Q
    |||| |||| ||||||||||||||||| |||| ||||  |||||||||||||| ||||||  |||||||||  |||||| |||| |||||||  |  |||    
T  27921516 ttgatggtcagatttaggcaagtgtac-aaattgtttgtcaagtaataaagtg-taagtagtgtatcgtatatacatgggttgttgtttcaactaggcaa 27921419  T
Q  333 ttcacattacttattta 349  Q
    ||||| |||||||||||    
T  27921418 ttcacgttacttattta 27921402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 20744911 - 20744872
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgata 288  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  20744911 ggcaagtgtaccaaatcatttaccaagtaataaagtgata 20744872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 24662253 - 24662212
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgat 287  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  24662253 ttaggtaagtgtaccaaatcgtttatcaagtaataaagtgat 24662212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 26110564 - 26110488
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||||| |||||  |||||||| ||||| | ||||||    
T  26110564 ttaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagggatttttgtttca 26110488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 26502137 - 26502185
Alignment:
Q  268 ttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  26502137 ttaccaagtaataaagtgataagt-gagtgtcgtatccacatggattgtc 26502185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 32581898 - 32582001
Alignment:
Q  261 aaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaa 360  Q
    |||| ||||| ||||||||||||| ||||||  |||||| ||| || | |||||||||||| ||| |  ||||| |||||||||| || ||||||| |||    
T  32581898 aaattgtttagcaagtaataaagt-ataagttgagtatcttattcataaggattgtcgttttaattaggcaatttacattacttactttggaacaataaa 32581996  T
Q  361 ataaa 365  Q
    |||||    
T  32581997 ataaa 32582001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 402
Target Start/End: Complemental strand, 32452491 - 32452388
Alignment:
Q  300 gtatccacatggattgtcgtttcaatcaaacaattcacattacttatttaggaacaacaaaataaat-aaagataacggtttagagttttgtaatttaat 398  Q
    ||||||||||||||||||||| |||| |  ||| || | ||||||||||  |||||| ||||||||| |||||||   || |||||||||| || |||||    
T  32452491 gtatccacatggattgtcgttccaattaggcaactcgcgttacttatttgagaacaataaaataaataaaagataggagtctagagttttgcaagttaat 32452392  T
Q  399 ttgt 402  Q
    ||||    
T  32452391 ttgt 32452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 20564158 - 20564113
Alignment:
Q  272 caagtaataaagtga-taagtatagtatcgtatccacatggattgt 316  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||    
T  20564158 caagtaataaagttagtaagtagagtatcgtatccacatggattgt 20564113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 363
Target Start/End: Complemental strand, 24656956 - 24656839
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||| || |||| |||| ||||||| | ||||||| || |||  ||| ||||||||||| |||||    |||||||||   |||||||    
T  24656956 ttaggcaagtgtaccagatagtttcccaattaataaaattataagtagagaatcaaatcaacatggattgttgtttcgtctaaacaattcgtgttactta 24656857  T
Q  346 tttaggaacaacaaaata 363  Q
    |||  |||||| ||||||    
T  24656856 tttgagaacaataaaata 24656839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 28664796 - 28664872
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||||||||||||||| |||||||||| || | ||| |||| ||||   | |||||||| | ||||||||||    
T  28664796 caagtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttattt 28664872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 6283 - 6385
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||   |||||||||| |||||||||    
T  6283 ttaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattactta 6382  T
Q  346 ttt 348  Q
    |||    
T  6383 ttt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 15568 - 15467
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||| |||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  15568 ttaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcg-ttcaatcaaataattcacgttactta 15470  T
Q  346 ttt 348  Q
    |||    
T  15469 ttt 15467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 242 - 389
Target Start/End: Original strand, 11232 - 11380
Alignment:
Q  242 ggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 341  Q
    |||||||| ||||||||| |||| ||||| ||| ||||||||||||||||| |||||| |||| ||||||||||| ||||||| |||||||||  |||||    
T  11232 ggatttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcatta 11331  T
Q  342 cttatttaggaacaa--caaaataaataaagataacggtttagagttttg 389  Q
    ||||||| |||||||   |||||||| | |||||| ||||||||||||||    
T  11332 cttatttgggaacaaataaaaataaa-agagataagggtttagagttttg 11380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 181803 - 181734
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||||||||||  |||||||||||||||||||||| |  |||||||||||||||| |||||||||||    
T  181803 caagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttt 181734  T

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Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 168401 - 168326
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  168401 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttc 168326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 232 - 420
Target Start/End: Original strand, 1717 - 1905
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaaca 331  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||     |||||    
T  1717 attgatggtcggatt-aggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttttgtgtaaaca 1815  T
Q  332 attcacattacttatttaggaacaacaaaataaataa--agataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagtt 420  Q
    |||| |  ||||| ||  ||||||| |||||||||||  ||||||  ||||||||||||| |||||||| |||||||| | ||||||||||    
T  1816 attctc-gtacttgttcgggaacaataaaataaataaagagataagtgtttagagttttgcaatttaatctgtttgcaacggagcaaagtt 1905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 54843 - 54931
Alignment:
Q  232 attgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  54843 attgatggtcggatt-aggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttt 54931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 48290 - 48235
Alignment:
Q  249 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatc 304  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 234362 - 234413
Alignment:
Q  271 ccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||| ||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacagagattgtcctttc 234413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 724 - 800
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||    
T  724 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttc 800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 348
Target Start/End: Original strand, 69911 - 70011
Alignment:
Q  248 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttatt 347  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||   |||||||||| | |||||||||    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatt 70010  T
Q  348 t 348  Q
    |    
T  70011 t 70011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 369
Target Start/End: Original strand, 78590 - 78713
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||  || |||||||||| | |||||||||||||||  || |||| | | |||||||    
T  78590 ttaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttcaacaaaccaatccgcgttactta 78689  T
Q  346 tttaggaacaacaaaataaataaa 369  Q
    ||| | ||||| ||||||||||||    
T  78690 tttggcaacaataaaataaataaa 78713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 230 - 324
Target Start/End: Original strand, 12089 - 12183
Alignment:
Q  230 ttattgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaa 324  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||| || |||||||||| ||||||    
T  12089 ttattgattgtcggatttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaa 12183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 3533 - 3603
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3533 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttc 3603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 2371 - 2435
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattg 315  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattg 2435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 2402 - 2466
Alignment:
Q  251 caagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattg 315  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattg 2466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 36098 - 35996
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||| ||| |||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||| |||||   |||||||    
T  36098 ttaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttactta 35999  T
Q  346 ttt 348  Q
    |||    
T  35998 ttt 35996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 29909 - 30004
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |  ||||||||| ||  |||||||||| || ||||||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttattt 30004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 39580 - 39655
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||| || ||||||||||||| |||||| ||||    
T  39580 ttaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttt 39655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 4586 - 4484
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    |||||||| |||||| ||||||||||||||||| ||| || |||| | |||||||||||||||||||||||| ||||  | |||||||||   |||||||    
T  4586 ttaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttactta 4487  T
Q  346 ttt 348  Q
    |||    
T  4486 ttt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 348
Target Start/End: Original strand, 35549 - 35635
Alignment:
Q  262 aatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    ||||||||| |||||||||||||||||| || ||||| ||||||||||||||| |||||||   |||||||||| | ||||||||||    
T  35549 aatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattt 35635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 3149 - 3225
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttca 323  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||| ||||||||||||||| |||||||| |||||    
T  3149 ttaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttca 3225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 919 - 824
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 348  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    ||||||||||||   |||||||| ||| ||||||||||    
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattt 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 81483 - 81558
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||  |||| ||||||||||||||||| |||||    
T  81483 ttaggcaagtttacgaaatcgtttaccaaataataaagtgataagta-ggtattgtatccacatggattgtggtttc 81558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 69078 - 69148
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtc 317  Q
    |||||||||||||||||||| || ||||||||||||||||||||||  || |||||||||||| ||||||||    
T  69078 ttaggcaagtgtaccaaatcatt-accaagtaataaagtgataagttgagaatcgtatccacaaggattgtc 69148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 488 - 403
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattc 335  Q
    ||||||||| || ||||||||| |||||||||||||||| ||| ||||||||||| ||| |||||||| ||||   ||||||||||    
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattc 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 21277 - 21348
Alignment:
Q  250 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||| ||||| || |||||||||||||||||||| |||||| |||||||| |||||||| ||||    
T  21277 gcaagtgtaccaa-tcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttc 21348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 89956 - 89881
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||| |||||| |||| ||| | |||||||||||    
T  89956 ttagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttc 89881  T

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Target: scaffold0238 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 421
Target Start/End: Original strand, 19107 - 19284
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 345  Q
    ||||||||||||||||||| |||| | |||||||||| ||||||||| | |||||||| |||||| ||| |||| |     ||||||||| | ||| |||    
T  19107 ttaggcaagtgtaccaaattgttttc-aagtaataaaatgataagtaaattatcgtatgcacatgaattatcgtgttgtctaaacaattcgcgttaatta 19205  T
Q  346 tttaggaacaaca-aaataaataaagata-ac-ggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    |||  |||||| | |||||||||| |||| ||  ||||||||||||  |||||||| |||||||| || ||||||||||    
T  19206 tttgagaacaaaataaataaataaggatatacaagtttagagtttttcaatttaatgtgtttgcaacaaagcaaagttt 19284  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 43304 - 43254
Alignment:
Q  272 caagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 322  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttc 43254  T

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Target: scaffold0394 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 365
Target Start/End: Complemental strand, 14023 - 13889
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt---atagtatcgtatccacatggattgtcgtttcaatcaaa 329  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||| ||||| |||||   ||  ||||||   ||||||||||||| || |||  | |    
T  14023 ttgatggtcagatttaggcaagtgtatcaaatcgtttaccaagtaattaagtg-taagtagaattatatcgtgaacacatggattgtcattccaactaga 13925  T
Q  330 caattcacattacttatttaggaacaacaaaataaa 365  Q
    |||||  | |||||||||| ||||||| ||||||||    
T  13924 caattagcgttacttatttgggaacaataaaataaa 13889  T

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Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 7515 - 7440
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 321  Q
    ||||| || ||||| |||||||||| ||||||||||||||||||||| ||||| ||||  ||| | ||||||||||    
T  7515 ttaggaaaatgtactaaatcgtttatcaagtaataaagtgataagtagagtattgtatttacaagaattgtcgttt 7440  T

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Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 51119 - 51162
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 289  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  51119 ttaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 72074 - 72125
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 303  Q
    ||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  72074 aagtgtaccaaattgttaaccaagtaataaagtgataagtagagtatggtat 72125  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 18848 - 18783
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcg-tatccacatg 310  Q
    |||||||||||||||||||  |||| ||||||||||| | ||||||| ||||||| ||||||||||    
T  18848 ttaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatg 18783  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 18715 - 18665
Alignment:
Q  371 ataacggtttagagttttgtaatttaatttgtttgcagcagagcaaagttt 421  Q
    |||| |||||||||||||| |||||||| |||||||| |||| ||||||||    
T  18715 ataagggtttagagttttgcaatttaatctgtttgcaacagaacaaagttt 18665  T

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Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 223133 - 223068
Alignment:
Q  246 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtatagtatcg-tatccacatg 310  Q
    |||||||||||| ||||||  |||| ||||||||||| | ||||||| ||||||| ||||||||||    
T  223133 ttaggcaagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatg 223068  T

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Target: scaffold0620 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 7697 - 7661
Alignment:
Q  252 aagtgtaccaaatcgtttaccaagtaataaagtgata 288  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7697 aagtgtatcaaatcgtttaccaagtaataaagtgata 7661  T

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Target: scaffold0606 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 7859 - 7910
Alignment:
Q  233 ttgaaggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagt 284  Q
    |||| ||||| ||||||| ||||||||  |||||||||||||||||||||||    
T  7859 ttgatggtcgaatttaggtaagtgtactcaatcgtttaccaagtaataaagt 7910  T

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