View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14015_low_10 (Length: 238)

Name: NF14015_low_10
Description: NF14015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14015_low_10
NF14015_low_10
[»] chr7 (45 HSPs)
chr7 (1-140)||(18797589-18797727)
chr7 (1-140)||(29173784-29173922)
chr7 (1-100)||(37703298-37703397)
chr7 (1-99)||(37110136-37110234)
chr7 (2-100)||(46480929-46481027)
chr7 (1-138)||(24212003-24212140)
chr7 (1-142)||(35353370-35353510)
chr7 (1-100)||(9355626-9355725)
chr7 (1-100)||(22687493-22687592)
chr7 (1-100)||(26587892-26587991)
chr7 (1-99)||(17842385-17842483)
chr7 (2-100)||(32820853-32820951)
chr7 (2-137)||(23111455-23111589)
chr7 (1-98)||(30055789-30055886)
chr7 (1-142)||(7335055-7335195)
chr7 (5-101)||(25691343-25691439)
chr7 (1-100)||(31520541-31520640)
chr7 (1-100)||(31578864-31578963)
chr7 (1-100)||(43925357-43925456)
chr7 (10-100)||(6546790-6546880)
chr7 (2-100)||(8861548-8861646)
chr7 (2-100)||(15612559-15612657)
chr7 (1-95)||(44411345-44411439)
chr7 (1-135)||(10481867-10482000)
chr7 (1-100)||(4583181-4583280)
chr7 (2-100)||(5657280-5657379)
chr7 (1-100)||(10359014-10359113)
chr7 (1-100)||(37347283-37347382)
chr7 (1-99)||(12390450-12390548)
chr7 (1-94)||(11071465-11071558)
chr7 (1-143)||(48928055-48928196)
chr7 (1-139)||(32432714-32432851)
chr7 (27-143)||(38258867-38258982)
chr7 (2-100)||(26980569-26980667)
chr7 (1-94)||(27284006-27284100)
chr7 (2-70)||(12166006-12166074)
chr7 (1-93)||(37704444-37704536)
chr7 (5-100)||(15672559-15672654)
chr7 (1-100)||(41764878-41764977)
chr7 (1-100)||(32593007-32593105)
chr7 (1-82)||(34361996-34362077)
chr7 (1-100)||(21991898-21991988)
chr7 (1-45)||(33688117-33688161)
chr7 (2-100)||(44598929-44599027)
chr7 (65-101)||(12166215-12166251)
[»] chr6 (15 HSPs)
chr6 (1-140)||(6090941-6091079)
chr6 (1-100)||(3879737-3879836)
chr6 (1-100)||(20768369-20768468)
chr6 (1-139)||(1946121-1946260)
chr6 (1-140)||(5627678-5627817)
chr6 (2-101)||(21016915-21017014)
chr6 (1-100)||(33892810-33892909)
chr6 (1-94)||(4318626-4318719)
chr6 (1-138)||(7054533-7054670)
chr6 (5-100)||(33619121-33619219)
chr6 (1-100)||(7234830-7234932)
chr6 (2-100)||(29182452-29182547)
chr6 (8-100)||(8513522-8513607)
chr6 (5-100)||(6089194-6089282)
chr6 (41-95)||(33724062-33724116)
[»] chr1 (52 HSPs)
chr1 (1-140)||(32216338-32216476)
chr1 (1-150)||(34012128-34012275)
chr1 (5-140)||(10923014-10923148)
chr1 (1-101)||(30254706-30254806)
chr1 (1-100)||(2960031-2960130)
chr1 (1-100)||(11742162-11742261)
chr1 (1-101)||(39393667-39393767)
chr1 (1-99)||(16415929-16416027)
chr1 (1-99)||(27227280-27227378)
chr1 (1-140)||(32267317-32267455)
chr1 (1-101)||(23999630-23999731)
chr1 (2-99)||(27266995-27267092)
chr1 (1-100)||(15383216-15383316)
chr1 (1-100)||(1547554-1547653)
chr1 (1-100)||(14758315-14758414)
chr1 (1-100)||(15168379-15168478)
chr1 (1-99)||(19899563-19899662)
chr1 (1-100)||(27532776-27532874)
chr1 (1-100)||(28564577-28564676)
chr1 (1-100)||(37451568-37451667)
chr1 (1-100)||(48353825-48353924)
chr1 (1-99)||(21289883-21289981)
chr1 (1-140)||(47279472-47279611)
chr1 (1-100)||(27763104-27763204)
chr1 (5-101)||(38823501-38823597)
chr1 (1-100)||(46931692-46931792)
chr1 (1-100)||(3535206-3535305)
chr1 (1-140)||(8222411-8222549)
chr1 (1-100)||(9902848-9902947)
chr1 (17-141)||(15752328-15752451)
chr1 (5-99)||(4330568-4330662)
chr1 (1-99)||(27563700-27563798)
chr1 (1-101)||(25160915-25161016)
chr1 (1-100)||(3309436-3309536)
chr1 (1-97)||(47682291-47682387)
chr1 (1-100)||(238307-238406)
chr1 (5-140)||(1359691-1359824)
chr1 (2-100)||(7078857-7078955)
chr1 (5-99)||(10181802-10181896)
chr1 (1-100)||(51129142-51129239)
chr1 (1-100)||(28769936-28770035)
chr1 (2-100)||(22170995-22171093)
chr1 (1-94)||(30326751-30326845)
chr1 (1-101)||(42721319-42721419)
chr1 (2-100)||(31962900-31962999)
chr1 (5-100)||(31621342-31621438)
chr1 (1-66)||(37618729-37618794)
chr1 (11-99)||(41926449-41926537)
chr1 (1-72)||(40885096-40885167)
chr1 (1-80)||(18422934-18423006)
chr1 (28-100)||(33725405-33725478)
chr1 (40-100)||(48620911-48620971)
[»] chr3 (52 HSPs)
chr3 (1-140)||(46297522-46297660)
chr3 (4-100)||(40552058-40552154)
chr3 (1-99)||(11357181-11357279)
chr3 (1-142)||(4015737-4015877)
chr3 (1-140)||(22622478-22622616)
chr3 (1-140)||(26941020-26941158)
chr3 (1-101)||(1089971-1090071)
chr3 (1-100)||(21193885-21193984)
chr3 (1-99)||(53228952-53229050)
chr3 (5-139)||(39282934-39283067)
chr3 (1-142)||(33378543-33378683)
chr3 (1-100)||(47481800-47481900)
chr3 (2-141)||(21009560-21009699)
chr3 (2-101)||(44891776-44891875)
chr3 (1-100)||(48355219-48355318)
chr3 (5-99)||(3362537-3362631)
chr3 (1-140)||(29099624-29099763)
chr3 (2-100)||(44186316-44186414)
chr3 (1-98)||(42505876-42505973)
chr3 (5-100)||(54506089-54506185)
chr3 (2-101)||(7327280-7327379)
chr3 (1-100)||(22451246-22451345)
chr3 (5-140)||(37157990-37158124)
chr3 (1-140)||(43975652-43975790)
chr3 (1-99)||(52040722-52040820)
chr3 (10-140)||(37203355-37203484)
chr3 (1-100)||(14586479-14586578)
chr3 (5-99)||(22445865-22445959)
chr3 (2-100)||(33698432-33698530)
chr3 (1-100)||(3654998-3655100)
chr3 (1-100)||(24707914-24708013)
chr3 (22-100)||(20373062-20373140)
chr3 (9-140)||(36012425-36012556)
chr3 (2-100)||(40936252-40936350)
chr3 (1-142)||(51212535-51212669)
chr3 (5-100)||(4761447-4761542)
chr3 (1-100)||(24488761-24488860)
chr3 (2-101)||(25580018-25580117)
chr3 (2-100)||(32373749-32373846)
chr3 (1-100)||(2008210-2008316)
chr3 (15-93)||(27480164-27480242)
chr3 (1-70)||(46994490-46994559)
chr3 (1-100)||(50475089-50475195)
chr3 (27-100)||(11356957-11357030)
chr3 (2-101)||(29164088-29164180)
chr3 (1-72)||(34133213-34133284)
chr3 (1-72)||(38591976-38592047)
chr3 (1-54)||(54828546-54828599)
chr3 (1-38)||(45174784-45174821)
chr3 (40-100)||(11467127-11467187)
chr3 (53-100)||(35844577-35844624)
chr3 (1-38)||(11835494-11835531)
[»] chr4 (50 HSPs)
chr4 (1-142)||(6864322-6864462)
chr4 (1-141)||(19440433-19440572)
chr4 (1-140)||(25184400-25184538)
chr4 (1-142)||(879332-879472)
chr4 (2-101)||(50765008-50765107)
chr4 (1-101)||(1815588-1815688)
chr4 (5-100)||(3042910-3043005)
chr4 (1-140)||(32912365-32912504)
chr4 (1-140)||(34361277-34361416)
chr4 (2-101)||(37775946-37776045)
chr4 (2-100)||(7703797-7703895)
chr4 (2-100)||(30002466-30002564)
chr4 (2-100)||(47254028-47254126)
chr4 (1-101)||(33341685-33341785)
chr4 (1-101)||(55477715-55477815)
chr4 (1-100)||(23761358-23761457)
chr4 (1-100)||(29584025-29584124)
chr4 (1-141)||(32579733-32579872)
chr4 (1-100)||(33816341-33816440)
chr4 (1-100)||(35025392-35025490)
chr4 (1-100)||(39400295-39400394)
chr4 (1-140)||(49376254-49376392)
chr4 (1-98)||(19089280-19089377)
chr4 (1-98)||(37663568-37663665)
chr4 (1-97)||(34947923-34948019)
chr4 (1-100)||(17272251-17272350)
chr4 (1-100)||(46887983-46888082)
chr4 (5-101)||(27396907-27397001)
chr4 (1-140)||(35020817-35020959)
chr4 (4-100)||(46883939-46884035)
chr4 (1-100)||(4598269-4598368)
chr4 (1-100)||(7152029-7152128)
chr4 (1-100)||(23431842-23431941)
chr4 (1-100)||(28002811-28002910)
chr4 (1-100)||(32592371-32592470)
chr4 (1-100)||(50697529-50697628)
chr4 (2-100)||(36493514-36493612)
chr4 (5-101)||(26896378-26896475)
chr4 (1-100)||(37288015-37288115)
chr4 (1-100)||(55240930-55241029)
chr4 (2-100)||(25700881-25700979)
chr4 (1-99)||(9139516-9139612)
chr4 (20-100)||(38012568-38012648)
chr4 (1-100)||(4205271-4205370)
chr4 (2-100)||(17168001-17168099)
chr4 (1-142)||(5047750-5047890)
chr4 (2-100)||(17173578-17173676)
chr4 (5-97)||(4934040-4934133)
chr4 (1-100)||(42200017-42200116)
chr4 (145-238)||(36798477-36798570)
[»] chr2 (42 HSPs)
chr2 (1-100)||(2325195-2325294)
chr2 (1-101)||(26357864-26357964)
chr2 (1-100)||(35959179-35959278)
chr2 (141-231)||(2324557-2324647)
chr2 (1-142)||(41961127-41961267)
chr2 (2-146)||(19424414-19424557)
chr2 (1-140)||(4763918-4764057)
chr2 (2-100)||(5881817-5881915)
chr2 (3-100)||(33660194-33660291)
chr2 (1-93)||(19500739-19500831)
chr2 (1-100)||(7006755-7006854)
chr2 (1-100)||(18494098-18494197)
chr2 (1-100)||(19289140-19289239)
chr2 (1-100)||(33709049-33709148)
chr2 (1-100)||(43648062-43648161)
chr2 (1-140)||(4167209-4167347)
chr2 (6-100)||(39167186-39167280)
chr2 (1-100)||(11366197-11366297)
chr2 (1-100)||(43770665-43770764)
chr2 (5-140)||(33550760-33550899)
chr2 (17-139)||(33902317-33902439)
chr2 (1-100)||(41465788-41465887)
chr2 (15-100)||(31862153-31862238)
chr2 (2-72)||(27349793-27349863)
chr2 (2-100)||(31570551-31570649)
chr2 (1-100)||(37905997-37906097)
chr2 (1-100)||(44913951-44914053)
chr2 (16-99)||(29241963-29242046)
chr2 (2-100)||(18257355-18257453)
chr2 (2-100)||(13711747-13711845)
chr2 (1-66)||(4478652-4478717)
chr2 (162-238)||(2337807-2337883)
chr2 (1-100)||(41051117-41051216)
chr2 (2-100)||(41463407-41463505)
chr2 (150-238)||(2344689-2344777)
chr2 (1-138)||(3177226-3177362)
chr2 (1-67)||(4263926-4263992)
chr2 (2-53)||(19314135-19314186)
chr2 (52-100)||(45328028-45328076)
chr2 (43-88)||(17053960-17054005)
chr2 (43-88)||(17071601-17071646)
chr2 (2-50)||(44286237-44286285)
[»] chr8 (38 HSPs)
chr8 (1-140)||(43643361-43643499)
chr8 (1-100)||(23854236-23854335)
chr8 (1-140)||(16446641-16446779)
chr8 (1-101)||(34895248-34895348)
chr8 (1-142)||(38644264-38644404)
chr8 (2-97)||(466119-466214)
chr8 (1-100)||(5299751-5299850)
chr8 (5-100)||(7890762-7890857)
chr8 (2-101)||(16223150-16223249)
chr8 (1-100)||(37970324-37970423)
chr8 (1-140)||(1149398-1149536)
chr8 (2-140)||(11727311-11727449)
chr8 (3-100)||(35859222-35859319)
chr8 (1-101)||(24823198-24823298)
chr8 (1-100)||(27082643-27082742)
chr8 (5-100)||(35459516-35459611)
chr8 (1-99)||(4132492-4132590)
chr8 (2-100)||(12587869-12587967)
chr8 (1-98)||(6098320-6098417)
chr8 (1-142)||(1205213-1205353)
chr8 (1-100)||(44869783-44869882)
chr8 (2-100)||(34951862-34951960)
chr8 (1-142)||(8803580-8803721)
chr8 (1-100)||(1953793-1953892)
chr8 (16-139)||(41362723-41362845)
chr8 (5-100)||(33198092-33198187)
chr8 (1-140)||(33906498-33906634)
chr8 (2-69)||(1149756-1149823)
chr8 (2-100)||(31933691-31933789)
chr8 (1-141)||(10554969-10555108)
chr8 (5-101)||(39098923-39099019)
chr8 (1-100)||(40862705-40862805)
chr8 (2-100)||(18259366-18259464)
chr8 (1-100)||(30654388-30654487)
chr8 (1-100)||(36694771-36694870)
chr8 (15-101)||(43025974-43026060)
chr8 (1-101)||(12876396-12876496)
chr8 (1-72)||(9864434-9864505)
[»] chr5 (51 HSPs)
chr5 (1-99)||(699437-699535)
chr5 (1-140)||(35511232-35511370)
chr5 (1-100)||(22973871-22973970)
chr5 (1-100)||(24886374-24886473)
chr5 (1-100)||(35826275-35826374)
chr5 (1-100)||(38528026-38528125)
chr5 (1-100)||(39573098-39573197)
chr5 (1-99)||(25889657-25889755)
chr5 (1-140)||(22981080-22981218)
chr5 (1-100)||(15992329-15992428)
chr5 (1-100)||(22255469-22255568)
chr5 (1-100)||(31705401-31705500)
chr5 (1-100)||(31786435-31786534)
chr5 (1-100)||(35504652-35504751)
chr5 (2-100)||(42343009-42343107)
chr5 (1-100)||(2888234-2888333)
chr5 (1-99)||(5830179-5830278)
chr5 (2-101)||(7693509-7693608)
chr5 (5-100)||(25669867-25669962)
chr5 (1-100)||(27330591-27330690)
chr5 (1-100)||(33908520-33908618)
chr5 (1-99)||(12910642-12910740)
chr5 (2-100)||(19120147-19120245)
chr5 (2-100)||(22019911-22020009)
chr5 (1-140)||(40133672-40133810)
chr5 (13-99)||(43254154-43254240)
chr5 (1-140)||(36867049-36867187)
chr5 (1-100)||(7208653-7208752)
chr5 (1-100)||(8437252-8437351)
chr5 (5-100)||(8741674-8741769)
chr5 (1-100)||(17157820-17157919)
chr5 (1-100)||(28416340-28416439)
chr5 (1-100)||(35934183-35934282)
chr5 (2-100)||(9200512-9200610)
chr5 (1-141)||(36860711-36860850)
chr5 (2-100)||(43308449-43308547)
chr5 (1-100)||(5837842-5837941)
chr5 (5-100)||(8467017-8467112)
chr5 (2-100)||(25500715-25500813)
chr5 (2-141)||(27318237-27318376)
chr5 (1-101)||(30969112-30969212)
chr5 (2-100)||(26269097-26269195)
chr5 (2-100)||(32563428-32563526)
chr5 (12-100)||(15724786-15724874)
chr5 (1-64)||(13956187-13956250)
chr5 (1-100)||(14409130-14409229)
chr5 (31-100)||(23116019-23116088)
chr5 (1-65)||(1428983-1429050)
chr5 (22-100)||(14919328-14919405)
chr5 (1-101)||(21088557-21088654)
chr5 (40-100)||(23954591-23954651)
[»] scaffold0318 (1 HSPs)
scaffold0318 (2-101)||(12197-12295)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-100)||(415-514)
scaffold0002 (1-100)||(408228-408327)
scaffold0002 (1-101)||(93899-93998)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-98)||(8174-8271)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-100)||(44243-44342)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-100)||(154445-154544)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-100)||(145814-145914)
[»] scaffold0008 (1 HSPs)
scaffold0008 (44-100)||(267606-267662)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-59)||(101002-101058)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 18797589 - 18797727
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18797589 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 18797688  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||||||||||||| | |||||||||||    
T  18797689 t-aaaaaagtcagttttctgactgcatcataaaagctccc 18797727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29173784 - 29173922
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  29173784 caagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaac-tttt 29173882  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||||||||||||| |||| ||||||||    
T  29173883 tcaaaaaagtcagttttctgactgcatcgtagaagctccc 29173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37703397 - 37703298
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37703397 caagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttttt 37703298  T

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Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37110136 - 37110234
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  37110136 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttt 37110234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 46481027 - 46480929
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  46481027 aagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaataaaacattaagatcataattaacttttt 46480929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24212003 - 24212140
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||    
T  24212003 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-ttt 24212101  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctc 138  Q
    ||       |||||||| |||||||||||||| ||||||    
T  24212102 ttcaaaaaagtcagtttcctgactgcaccgtagaagctc 24212140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 35353370 - 35353510
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  35353370 caagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaac-tttt 35353468  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       |||||||| ||||||||||| || ||||||||||    
T  35353469 tcaaaaaagtcagtttcctgactgcaccttagaagctcccaa 35353510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9355725 - 9355626
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  9355725 caagatgttgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 9355626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22687493 - 22687592
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  22687493 caagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcatacattaagattaaaattaacttttt 22687592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26587991 - 26587892
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  26587991 caagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaacttttt 26587892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17842483 - 17842385
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  17842483 caagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttt 17842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 32820951 - 32820853
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32820951 aagatgttgcaagcattactagatgaattactattaatcattcatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 32820853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 23111455 - 23111589
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  23111455 aagatgttgaaagcattactagaagaattactattgatcataaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaactttttt 23111554  T
Q  102 nnnnnnngtcagttttctgactgcaccgtaaaagct 137  Q
           |||||||||||||||| |||||| |||||    
T  23111555 -aaaaaagtcagttttctgactgtaccgtagaagct 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30055789 - 30055886
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  30055789 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaacttt 30055886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 7335055 - 7335195
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  7335055 caagatgttgcaagcattactagatgaattactattaatcattaatcagaaatcaataatttaaaaatgaatcaaacattaagatcaaaattaa-ttttt 7335153  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       |||| ||| ||||||||||| || ||||||||||    
T  7335154 tcaaaaaagtcaatttcctgactgcaccatagaagctcccaa 7335195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 25691439 - 25691343
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  25691439 atgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaatttttt 25691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31520640 - 31520541
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  31520640 caagatgttgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaacttttt 31520541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31578963 - 31578864
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||| ||| |||||||||||||||||    
T  31578963 caagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaaattaacttttt 31578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43925357 - 43925456
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  43925357 caagatgttgcaagcattactagatgaattactattaatcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 43925456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 6546790 - 6546880
Alignment:
Q  10 gcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  6546790 gcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttt 6546880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 8861548 - 8861646
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  8861548 aagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacactaagattaaaattaacttttt 8861646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 15612657 - 15612559
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  15612657 aagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttt 15612559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 44411439 - 44411345
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaac 95  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  44411439 caagatgttgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataattaac 44411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10481867 - 10482000
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||| ||| |||||||||||||||||| ||||    
T  10481867 caagatgttgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataaattaaatattaagatcaaaattaac-tttt 10481965  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaag 135  Q
    |       |||||||||||||||||||| ||||||    
T  10481966 tcaaaaaagtcagttttctgactgcaccataaaag 10482000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4583181 - 4583280
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||| |||||||||||||| || || ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  4583181 caagatgttgcaagcattactggatgaattactattaatcatgaatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaattaacttttt 4583280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 5657379 - 5657280
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacatt-aagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||    
T  5657379 aagatgttgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaataaatcattaaagattaaaattaacttttt 5657280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10359113 - 10359014
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  10359113 caagattttgcaagcattactaaatgatttactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaattaacttttt 10359014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37347283 - 37347382
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  37347283 caagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaacttttt 37347382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12390548 - 12390450
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||| |||||||||||||||||||||| || |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||    
T  12390548 caagatgttgcaaccattactagatgaattactatttatcattaatcagtaattgacaatttaaaaatgaaataaacattaagatcaaaattaactttt 12390450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11071465 - 11071558
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaa 94  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||    
T  11071465 caagatgttgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 48928196 - 48928055
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||| |||  |||||| ||||||||||||| |||||    
T  48928196 caagatgttgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatcgaacatttagatcaaaattaa-ttttt 48928098  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaat 143  Q
    |       |||| |||||| ||||||||||| |||||||||||    
T  48928097 ttaaaaaagtcaattttctaactgcaccgtagaagctcccaat 48928055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 32432714 - 32432851
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| |||||||||||||||||||||||||| |||| || || ||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  32432714 caaggtgttgcaagcattactagatgaattattattaatcatgaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaagtaacttttt 32432813  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcc 139  Q
    |       |||||||| |||||||||||||| |||||||    
T  32432814 t-aaaaaagtcagtttcctgactgcaccgtagaagctcc 32432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 38258867 - 38258982
Alignment:
Q  27 aattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttttctgactgca 126  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||        |||||||||||||||||    
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttttcaaaaaaatcagttttctgactgca 38258965  T
Q  127 ccgtaaaagctcccaat 143  Q
    ||||| |||||||||||    
T  38258966 ccgtagaagctcccaat 38258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 26980569 - 26980667
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  26980569 aagatgttgcaagtattactagatgaattattgttgatcattaatcggtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttt 26980667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27284006 - 27284100
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaat-gaataaaacattaagatcaaaattaa 94  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||| ||||||||| |||||||||||    
T  27284006 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataaaatcaaacattaaaatcaaaattaa 27284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 12166006 - 12166074
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 70  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12166006 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37704444 - 37704536
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaatta 93  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||||| ||||    
T  37704444 caagatgttgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatcaaacattaaaatcaagatta 37704536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 15672654 - 15672559
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||| |||||||||| | |||||||| |||||    
T  15672654 atgttgcaagcattactagatgaattactattgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaaggttaaaattaatttttt 15672559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41764977 - 41764878
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||   ||||||||||||||||||||| ||||    
T  41764977 caagattttgcaagcattactggatgaattattattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaacctttt 41764878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32593105 - 32593007
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| |||  |||||||||| ||||||||| ||| ||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  32593105 caagatgttacaaatattactagataaattactatggatcattaatcagcaatcaacaattt-aaaatgaattgaacattaagatcaaaattaacttttt 32593007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34362077 - 34361996
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaa 82  Q
    |||||| |||||| ||||||||||||||||||| ||||| |||||||||| || |||||||||||||||||| |||||||||    
T  34362077 caagatattgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaa 34361996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21991898 - 21991988
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||     |||||||||||||||||| ||    || ||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  21991898 caagatgttgcaagca-----agatgaattactattgatcat----cattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacctttt 21991988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33688161 - 33688117
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaa 45  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  33688161 caagatgttgcaagcattactagatgaattgctattgatcattaa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 44598929 - 44599027
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatc---agtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    |||||||| ||||||||||||||||||  ||||||||| |||||||   | ||||||||||||| ||||||||| || | ||||||| |||||||| |||    
T  44598929 aagatgttacaagcattactagatgaa--actattgatcattaatcaataataatcaacaattt-aaaatgaatcaatcgttaagattaaaattaatttt 44599025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 12166215 - 12166251
Alignment:
Q  65 aaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||| |||||||||||| |||||||||||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaactttttt 12166251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6091079 - 6090941
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6091079 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 6090980  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       || |||||||||||||||||||| ||||||||    
T  6090979 t-aaaaaagtaagttttctgactgcaccgtagaagctccc 6090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3879836 - 3879737
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  3879836 caagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 3879737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20768369 - 20768468
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  20768369 caaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattgaacattaagatcaaaattaacttttt 20768468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 1946121 - 1946260
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  1946121 caagatgttacaagcattattagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttt 1946220  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctcc 139  Q
    ||       |||||||| |||||||||||||| |||||||    
T  1946221 ttcaaaaaagtcagtttcctgactgcaccgtagaagctcc 1946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 5627678 - 5627817
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||    
T  5627678 caagatgttgcaagcattactaggtgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaa-tttt 5627776  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    ||        ||||||| |||||||||||||| ||||||||    
T  5627777 tttaaaaaaatcagtttcctgactgcaccgtagaagctccc 5627817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 21017014 - 21016915
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  21017014 aagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaactttttt 21016915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33892909 - 33892810
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  33892909 caagatgttgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaggttaaaattaacttttt 33892810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4318719 - 4318626
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaa 94  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||| || ||||||||    
T  4318719 caagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaa 4318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7054670 - 7054533
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||| |||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||| ||    
T  7054670 caagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatgaatcaaacattaaaatcaaaattaact-tt 7054572  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctc 138  Q
    ||       ||||||||  ||||||||||||||||||||    
T  7054571 ttcaaaaaagtcagtttcttgactgcaccgtaaaagctc 7054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 33619121 - 33619219
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaat---cagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||   ||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  33619121 atgttgcaagcattactagatgaattactattgatcattaatgatcagcaatcaacaatttaaaaatgaatcgaacattaagattaaaattaacttttt 33619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7234932 - 7234830
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaat---cagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactt 97  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||   ||  |||||||||||||||||| |||  |||||||||||||||||||||||    
T  7234932 caagatgttgcaaacattactagatgaattactattgatcattaatcaacaacaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactt 7234833  T
Q  98 ttt 100  Q
    |||    
T  7234832 ttt 7234830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 29182452 - 29182547
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||   ||| ||||||||  |||||||||||||||||||||| || ||||||||  ||||||||||||||    
T  29182452 aagatgttgcaagtattactagatgaattact---gatcattaatcaacaatcaacaatttaaaaatgaatcaatcattaagactaaaattaacttttt 29182547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 8513522 - 8513607
Alignment:
Q  8 ttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||| ||||||||| || ||||||||||||||    
T  8513522 ttgcaagcattactagatgaattactattgatcattaat-------caacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 8513607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 6089194 - 6089282
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||| |||||||||||||||| ||||||       ||||||||||||||||||| ||||||||| || |||||||| |||||    
T  6089194 atgttgcaagcattactatatgaattactattgatcattaat-------caacaatttaaaaatgaatcaaacattaaaattaaaattaatttttt 6089282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 33724116 - 33724062
Alignment:
Q  41 attaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaac 95  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33724116 attaatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32216338 - 32216476
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32216338 caagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 32216437  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       ||||||||||||||||||||||| ||||||||    
T  32216438 t-aaaaaagtcagttttctgactgcaccgtagaagctccc 32216476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 34012275 - 34012128
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34012275 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 34012176  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaataaacaaa 150  Q
    |       |||||||| |||||||||||||| |||||||| |||||||||    
T  34012175 t-aaaaaagtcagtttcctgactgcaccgtagaagctccc-ataaacaaa 34012128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 10923014 - 10923148
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnn 104  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||       
T  10923014 atgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac-tttttcaa 10923112  T
Q  105 nnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
        |||||||||||||||||||| || ||||||||    
T  10923113 aagagtcagttttctgactgcaccatagaagctccc 10923148  T

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Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30254706 - 30254806
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  30254706 caagatgttgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 30254805  T
Q  101 t 101  Q
    |    
T  30254806 t 30254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2960031 - 2960130
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2960031 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 2960130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11742261 - 11742162
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  11742261 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 11742162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39393667 - 39393767
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  39393667 caagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaataaaacattaaaattaaaattaacttttt 39393766  T
Q  101 t 101  Q
    |    
T  39393767 t 39393767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16415929 - 16416027
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  16415929 caagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaattttt 16416027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27227378 - 27227280
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  27227378 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaattaaacattaatatcaaaattaactttt 27227280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32267317 - 32267455
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  32267317 caagatgttgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa-ttttt 32267415  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||| ||| |||||||||||||| ||||||||    
T  32267416 tcaaaaaagtcaatttcctgactgcaccgtagaagctccc 32267455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23999630 - 23999731
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  23999630 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttt 23999729  T
Q  100 tt 101  Q
    ||    
T  23999730 tt 23999731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 27267092 - 27266995
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  27267092 aagatgttgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaattaaacattaagatcaaaattaactttt 27266995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15383216 - 15383316
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg-aataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  15383216 caagatgttgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttt 15383315  T
Q  100 t 100  Q
    |    
T  15383316 t 15383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1547554 - 1547653
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  1547554 caagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaatttttt 1547653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14758315 - 14758414
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  14758315 caagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaacttttt 14758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15168379 - 15168478
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  15168379 caagatgttgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaacttttt 15168478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19899662 - 19899563
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  19899662 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttt 19899563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27532874 - 27532776
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  27532874 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa-ttaaaaatgaatcaaacattaagattaaaattaacttttt 27532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28564676 - 28564577
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  28564676 caagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 28564577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37451568 - 37451667
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  37451568 caagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaacttttt 37451667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48353825 - 48353924
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  48353825 caagatattgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 48353924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21289883 - 21289981
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  21289883 caagatgttgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaattttt 21289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 47279472 - 47279611
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  47279472 caagatgttgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 47279571  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
             |||||||| ||||||||||||| ||||||||    
T  47279572 caaaaaaaatcagttttatgactgcaccgtagaagctccc 47279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27763204 - 27763104
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  27763204 caagatgttgcaagcattactagataaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttt 27763105  T
Q  100 t 100  Q
    |    
T  27763104 t 27763104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 38823501 - 38823597
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  38823501 atgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaactttttt 38823597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 46931692 - 46931792
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  46931692 caagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttt 46931791  T
Q  100 t 100  Q
    |    
T  46931792 t 46931792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3535206 - 3535305
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  3535206 caagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcaaacattaagattaaaactaacttttt 3535305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8222411 - 8222549
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg-aataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |||    
T  8222411 caagatgttgcaagcattactagatgaatta-tattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaac-ttt 8222508  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    ||       |||||||||||||||| |||||| ||||||||    
T  8222509 ttcaaaaaagtcagttttctgactgtaccgtagaagctccc 8222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9902947 - 9902848
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  9902947 caagatgctgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaacttttt 9902848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 15752328 - 15752451
Alignment:
Q  17 ttactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttt 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||        ||| |||    
T  15752328 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaa-ttttttttaaaaaatcaattt 15752426  T
Q  117 tctgactgcaccgtaaaagctccca 141  Q
    ||||||||||||||| |||||||||    
T  15752427 tctgactgcaccgtagaagctccca 15752451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 4330568 - 4330662
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  4330568 atgttgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaacattaagatcaaaattaattttt 4330662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27563798 - 27563700
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  27563798 caagatgttgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaaacattaagatcataattaactttt 27563700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25160915 - 25161016
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg-aataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |||    
T  25160915 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaaccttt 25161014  T
Q  100 tt 101  Q
    ||    
T  25161015 tt 25161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3309436 - 3309536
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaaga-tcaaaattaactttt 99  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| | |||||||||||||    
T  3309436 caagatattgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatttagatttaaaattaactttt 3309535  T
Q  100 t 100  Q
    |    
T  3309536 t 3309536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 47682387 - 47682291
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactt 97  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||| |||||||||||    
T  47682387 caagatgttgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaattaaacattaagattaaaattaactt 47682291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 238406 - 238307
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||    
T  238406 caagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatcaacttttt 238307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 1359824 - 1359691
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnn 104  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||   ||||||       
T  1359824 atgttgcaagcattactggatgaattactatcgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaattt--ttttttttta 1359727  T
Q  105 nnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
        ||||||||||||||||||||||| ||| ||||    
T  1359726 acaagtcagttttctgactgcaccgtagaagatccc 1359691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 7078955 - 7078857
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  7078955 aagatattgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttt 7078857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 10181896 - 10181802
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  10181896 atgttgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaactttt 10181802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 51129142 - 51129239
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||| ||  |||||||||||||    
T  51129142 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagtattaaaat--aaattaacttttt 51129239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28769936 - 28770035
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  28769936 caagatgttgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 28770035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 22170995 - 22171093
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||| ||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  22170995 aagatgttgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaacttttt 22171093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30326845 - 30326751
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg-aataaaacattaagatcaaaattaa 94  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  30326845 caagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaaatcaaaattaa 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42721319 - 42721419
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||  |||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||    
T  42721319 caagatgttgcaattattactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatcaaacattaaaatcataattaacttttt 42721418  T
Q  101 t 101  Q
    |    
T  42721419 t 42721419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 31962900 - 31962999
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa-tttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||    
T  31962900 aagatgttgcaagcattattagatgaactactattgatcattaatcggtaatcaacaattttaaaaataaatcaaacattaagattaaaattaacttttt 31962999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 31621438 - 31621342
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaattta-aaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||  ||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  31621438 atgttgcaagcattagtagatgaactactattgatcattaatcatcaatcaacaatttaaaaaatgaatcgaacattaagatcaaaattaacttttt 31621342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37618794 - 37618729
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaa 66  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||    
T  37618794 caagatgttgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaaaa 37618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 41926449 - 41926537
Alignment:
Q  11 caagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||  |||||||| ||||| ||||||||| |||| |||||| ||||    
T  41926449 caagcattactagatgaattactattgatcattaattaataatcaatgatttaaaattgaatcaaacattaaaatcataattaattttt 41926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40885096 - 40885167
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 72  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| || |||||| |||| ||||||||||    
T  40885096 caagatgttgcaaacattactagatgaattactattgatcattaattagcaatcaataattcaaaaatgaat 40885167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18422934 - 18423006
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacatt 80  Q
    |||||||||||||||||| ||||||||||||||||||       |||| ||||||||||||||||||||||| |||||||    
T  18422934 caagatgttgcaagcattgctagatgaattactattg-------atcattaatcaacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 33725478 - 33725405
Alignment:
Q  28 attactattgattattaatcagtaatcaacaatt-taaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||| ||||||||| |||||||||||  ||||||||||  ||||||||||||||||| ||||||||    
T  33725478 attactattgatcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaacttttt 33725405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 48620911 - 48620971
Alignment:
Q  40 tattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| |||| ||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  48620911 tattgatcattaatcaacaattttaaaatgaatcaaacattaagattaaaattaacttttt 48620971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46297660 - 46297522
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46297660 caagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 46297561  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       ||||||||| ||||||||||||| ||||||||    
T  46297560 t-aaaaaagtcagttttttgactgcaccgtagaagctccc 46297522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 40552154 - 40552058
Alignment:
Q  4 gatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40552154 gatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 40552058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11357279 - 11357181
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11357279 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 11357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 4015737 - 4015877
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  4015737 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaac-tttt 4015835  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       ||||||||  ||||||||||||| ||||||||||    
T  4015836 tcaaaaaagtcagtttcatgactgcaccgtagaagctcccaa 4015877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22622616 - 22622478
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||    
T  22622616 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatcaaacattaaaatcaaaattaact-ttt 22622518  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |        ||||||| |||||||||||||||||||||||    
T  22622517 tcaaaaaaatcagtttcctgactgcaccgtaaaagctccc 22622478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26941158 - 26941020
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||| ||||||||||||| |||    
T  26941158 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagcgttaaaatcaaaattaact-ttt 26941060  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       ||||||||||||||||||||||| ||||||||    
T  26941059 tcaaaaaagtcagttttctgactgcaccgtagaagctccc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1089971 - 1090071
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1089971 caagattttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 1090070  T
Q  101 t 101  Q
    |    
T  1090071 t 1090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21193885 - 21193984
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  21193885 caagatgttgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 21193984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53229050 - 53228952
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53229050 caagatgttgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 53228952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 39282934 - 39283067
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnn 104  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||       
T  39282934 atgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttttcaa 39283032  T
Q  105 nnnngtcagttttctgactgcaccgtaaaagctcc 139  Q
        |||||||| |||||||||||||| |||||||    
T  39283033 aaaagtcagtttcctgactgcaccgtagaagctcc 39283067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33378683 - 33378543
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||| |||||||| |||||    
T  33378683 caagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatcaaacattaagattaaaattaa-ttttt 33378585  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       |||||||| |||||||||||||| ||||||||||    
T  33378584 tcaaaaaagtcagtttcctgactgcaccgtagaagctcccaa 33378543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47481800 - 47481900
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  47481800 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttt 47481899  T
Q  100 t 100  Q
    |    
T  47481900 t 47481900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 21009699 - 21009560
Alignment:
Q  2 aagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  21009699 aagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa-ttttt 21009601  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccca 141  Q
    |       |||||||| |||||||||||||| || ||||||    
T  21009600 ttaaaaaagtcagtttcctgactgcaccgtagaaactccca 21009560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 44891776 - 44891875
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  44891776 aagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttt 44891875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48355219 - 48355318
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  48355219 caagatgttgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 48355318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 3362537 - 3362631
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  3362537 atgttgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcataattaactttt 3362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29099624 - 29099763
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  29099624 caagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaatattaaaattaacttttt 29099723  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
            ||||||||  ||||||||||||| ||||||||    
T  29099724 caaaaaaagtcagtttcatgactgcaccgtagaagctccc 29099763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 44186414 - 44186316
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  44186414 aagatgttgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacatttt 44186316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 42505973 - 42505876
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  42505973 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaacttt 42505876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 54506089 - 54506185
Alignment:
Q  5 atgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  54506089 atgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 54506185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 7327379 - 7327280
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||    
T  7327379 aagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaactttttt 7327280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22451246 - 22451345
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  22451246 caagatgttgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcgaacattaagatcaaaattaacttttt 22451345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 37157990 - 37158124
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnn 104  Q
    |||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||       
T  37157990 atgtcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttttcaa 37158088  T
Q  105 nnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
        |||||||| |||||||||||||| ||||||||    
T  37158089 aaaagtcagtttcctgactgcaccgtagaagctccc 37158124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43975790 - 43975652
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||| ||||| |||||    
T  43975790 caagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaagattaa-ttttt 43975692  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       ||||||||||||||||||||||| || |||||    
T  43975691 tcaaaagagtcagttttctgactgcaccgtagaaactccc 43975652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52040820 - 52040722
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||| ||||||||||||||| | ||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52040820 caagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 52040722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 37203355 - 37203484
Alignment:
Q  10 gcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnng 109  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||       |    
T  37203355 gcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttttcaaaaaag 37203453  T
Q  110 tcagttttctgactgcaccgtaaaagctccc 140  Q
    ||||||| |||||||||||||| ||||||||    
T  37203454 tcagtttcctgactgcaccgtagaagctccc 37203484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14586578 - 14586479
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||    
T  14586578 caagatgttgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaatttttt 14586479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 22445959 - 22445865
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  22445959 atgttgcaagtattactggatgaattactattgatcattaatcagtaatcaacaatttaaatatgaatcaaacattaagatcataattaactttt 22445865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 33698432 - 33698530
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |  ||||||||| ||||||||||||||    
T  33698432 aagatattgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcagtcattaagattaaaattaacttttt 33698530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3655100 - 3654998
Alignment:
Q  1 caagatgttgcaagcattactagat--gaattactattgattattaatcagtaatcaacaatttaaaaat-gaataaaacattaagatcaaaattaactt 97  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||| |    
T  3655100 caagatgttgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaataaaatcaaacattaaaatcaaaattaacat 3655001  T
Q  98 ttt 100  Q
    |||    
T  3655000 ttt 3654998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 24708013 - 24707914
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| ||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  24708013 caagaagttgcaagcattattagataaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 24707914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 20373140 - 20373062
Alignment:
Q  22 agatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 20373062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 36012425 - 36012556
Alignment:
Q  9 tgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnn 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || |||||| |  |||||           
T  36012425 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaattaaaatttaactttttcaaaaaa 36012524  T
Q  109 gtcagttttctgactgcaccgtaaaagctccc 140  Q
    ||||||||  ||||||||||||| ||||||||    
T  36012525 gtcagtttcatgactgcaccgtagaagctccc 36012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 40936252 - 40936350
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||| || |||||||||  |||||||||||||    
T  40936252 aagatgttgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatcaatcattaagattgaaattaacttttt 40936350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 51212669 - 51212535
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||      |||||||||||||||||| ||||    
T  51212669 caagatgttgcaagcattactagatgaattactattgatcattaattaaaaatcaacaatttaaaaatgaa------attaagatcaaaattaac-tttt 51212577  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       |||||||||||||||||||| || ||||||||||    
T  51212576 tcaaaaatgtcagttttctgactgcaccatagaagctcccaa 51212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 4761542 - 4761447
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| |||||| ||||||||||||||| || ||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  4761542 atgttgcaaacattaccagatgaattactattaatcattaatcagaaatcaacaatttgaaaatgaatcaaacattaaaatcaaaattaacttttt 4761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 24488860 - 24488761
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||| ||||||||| || || ||||| ||||||| ||||||||||||||| ||||||||| || ||||||||||||||    
T  24488860 caagatgttgcaagcattactagatgcattactattaatcatgaatcaataatcaataatttaaaaatgaatcaaacattaatattaaaattaacttttt 24488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 25580018 - 25580117
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||  || ||||||||| || ||||||||||||    
T  25580018 aagatattgcaagcattactagatgaattactattgatcattaatccgcaatcaacaatttaaaaatgaaccaatcattaagattaagattaactttttt 25580117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 32373749 - 32373846
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||  | || |||||| ||||||||||||||    
T  32373749 aagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaattt-aaaatgaattcatcaataagattaaaattaacttttt 32373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2008210 - 2008316
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaat-------caacaatttaaaaatgaataaaacattaagatcaaaatta 93  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||||       ||||||||||||||||||| |||||||||||| |||||||    
T  2008210 caagatgttgcaagcattactagatgaaataatattgatcattaatcagtaatcattaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 2008309  T
Q  94 acttttt 100  Q
    |||||||    
T  2008310 acttttt 2008316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 27480242 - 27480164
Alignment:
Q  15 cattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaatta 93  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||| ||||||||    
T  27480242 cattactagatgaattactattgattattaatcagcgatcaacaatttaaaaatgaatcgaacattaagaacaaaatta 27480164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46994559 - 46994490
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatga 70  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  46994559 caagatattgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50475089 - 50475195
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattatta-------atcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaatta 93  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  50475089 caagatgttgcaagcattactagatgaattagtattgatcattaatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaatta 50475188  T
Q  94 acttttt 100  Q
    | |||||    
T  50475189 aattttt 50475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 11357030 - 11356957
Alignment:
Q  27 aattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| || |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  11357030 aattactattcatcattaattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaacttttt 11356957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 29164088 - 29164180
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||       ||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  29164088 aagatgttacaagcattactagatgaattactattgatcattaat-------caacaatttaaaaataaatcaaacattaagattaaaattaactttttt 29164180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34133213 - 34133284
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 72  Q
    |||||||||||||||||||||||||||||||||| | || || |||| ||||||||||||||||||||||||    
T  34133213 caagatgttgcaagcattactagatgaattactagtaatcatgaatcggtaatcaacaatttaaaaatgaat 34133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38591976 - 38592047
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 72  Q
    ||||||||||||||||||| || |  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  38591976 caagatgttgcaagcattattaaacaaattactattgatcattaatcagtaatcaacaatttaaaaatgaat 38592047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54828599 - 54828546
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatc 54  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  54828599 caagatgttgcaagcattactagataaattactattgatcattaatcagtaatc 54828546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45174784 - 45174821
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattga 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45174784 caagatgttgcaagcattactagatgaattactattga 45174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 11467127 - 11467187
Alignment:
Q  40 tattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| |||| ||||||||||||||||||||||| || ||||||||  ||||||||||||||    
T  11467127 tattgatcattaatcaacaatttaaaaatgaatcaatcattaagaataaaattaacttttt 11467187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 35844577 - 35844624
Alignment:
Q  53 tcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||| ||| ||||||||| || ||||||||||||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaacttttt 35844624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11835531 - 11835494
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattga 38  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  11835531 caagatgttgcaaacattactaaatgaattactattga 11835494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6864322 - 6864462
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  6864322 caagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttt 6864420  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       ||||||||||||||||||||||| ||||||||||    
T  6864421 tcaaaaaagtcagttttctgactgcaccgtagaagctcccaa 6864462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19440572 - 19440433
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  19440572 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaattaatcaaacattaagatcaaaattaacttttt 19440473  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccca 141  Q
    |       |||||||| |||||||||||||| |||||||||    
T  19440472 t-aaaaaagtcagtttcctgactgcaccgtagaagctccca 19440433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25184400 - 25184538
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||    
T  25184400 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaac-tttt 25184498  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||||||||||||||| || ||||||||    
T  25184499 tcaaaaaagtcagttttctgactgcaccatagaagctccc 25184538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 879472 - 879332
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  879472 caagatgttgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 879373  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       ||||||||||||||| |||| || ||||||||||    
T  879372 t-taaaaagtcagttttctgactacaccatagaagctcccaa 879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 50765008 - 50765107
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  50765008 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttt 50765107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1815588 - 1815688
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1815588 caagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 1815687  T
Q  101 t 101  Q
    |    
T  1815688 t 1815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 3042910 - 3043005
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  3042910 atgttgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 3043005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32912504 - 32912365
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||    
T  32912504 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatgaa-tttt 32912406  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    ||       |||||||| |||||||||||||||||||||||    
T  32912405 ttcaaaaaagtcagtttcctgactgcaccgtaaaagctccc 32912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 34361416 - 34361277
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||    
T  34361416 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaact-tt 34361318  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    ||       |||||||| |||||||||||||| ||||||||    
T  34361317 ttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 34361277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 37775946 - 37776045
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  37775946 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattgaaattaactttttt 37776045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 7703797 - 7703895
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  7703797 aagatgttgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 7703895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 30002564 - 30002466
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  30002564 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 30002466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 47254028 - 47254126
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  47254028 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttt 47254126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33341685 - 33341785
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  33341685 caagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaatttttt 33341784  T
Q  101 t 101  Q
    |    
T  33341785 t 33341785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 55477815 - 55477715
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  55477815 caagatgttgcaagcattactagatgaattactattaatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttt 55477716  T
Q  101 t 101  Q
    |    
T  55477715 t 55477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23761358 - 23761457
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  23761358 caagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaagattaaaattaacttttt 23761457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29584124 - 29584025
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||||    
T  29584124 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaacttttt 29584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 32579733 - 32579872
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  32579733 caagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcaaacattaagatcaaaattaa-ttttt 32579831  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccca 141  Q
    |       ||||||||||| ||||||||||| || ||||||    
T  32579832 tcaaaaaagtcagttttctaactgcaccgtagaaactccca 32579872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33816440 - 33816341
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  33816440 caagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaacttttt 33816341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35025490 - 35025392
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35025490 caagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaa-atcaaaattaacttttt 35025392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39400295 - 39400394
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  39400295 caagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 39400394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 49376254 - 49376392
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||| ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  49376254 caagaagttgaaagcattactaaatgaattactattgatcattaatcagtaatcaagaatttaaaaatgaattaaacattaagatcaaaattaac-tttt 49376352  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||| |||||||||||||| ||||||||    
T  49376353 tcaaaaaagtcagtttcctgactgcaccgtagaagctccc 49376392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19089377 - 19089280
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  19089377 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaacttt 19089280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37663665 - 37663568
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  37663665 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaacttt 37663568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34948019 - 34947923
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactt 97  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  34948019 caagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 17272251 - 17272350
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||| ||||||||||||||    
T  17272251 caagatgttgcaagcattactagatgaattactattgatcattaatcggtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaacttttt 17272350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46888082 - 46887983
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  46888082 caagatgttacaagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaacttttt 46887983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 27396907 - 27397001
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  27396907 atgttgcaagcattactagatgaattactattgatcattaat--gtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttt 27397001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35020959 - 35020817
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactat----tgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaact 96  Q
    |||||| |||||| |||||||||||||||||||||    |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  35020959 caagatattgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaact 35020860  T
Q  97 tttttnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |||||       ||||||||||||||| ||||||| ||||||||    
T  35020859 ttttt-aaaagagtcagttttctgactacaccgtagaagctccc 35020817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 46884035 - 46883939
Alignment:
Q  4 gatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || |||||||| |||||    
T  46884035 gatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaataaaaattaatttttt 46883939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4598269 - 4598368
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  4598269 caagatgttgcaagcattattagattaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacatttt 4598368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7152128 - 7152029
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  7152128 caagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatgaaaaataacttttt 7152029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23431842 - 23431941
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||| || ||||||||||||||    
T  23431842 caagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaattaaaattaacttttt 23431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28002910 - 28002811
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||| | ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28002910 caagatgttgctaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaacttttt 28002811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32592371 - 32592470
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  32592371 caagatgttgaaagcattactaaatgaattactattgatcgttaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 32592470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50697529 - 50697628
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| || |||||||| |||||    
T  50697529 caagatgttgtaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaatttttt 50697628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 36493612 - 36493514
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  36493612 aagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaacttttt 36493514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 26896378 - 26896475
Alignment:
Q  5 atgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  26896378 atgttgcaaacattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcgaacattaaaatcaaaattaactttttt 26896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37288015 - 37288115
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaaga-tcaaaattaactttt 99  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||| | |||||||||||||    
T  37288015 caagatgttgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatcaaacattaagatttaaaattaactttt 37288114  T
Q  100 t 100  Q
    |    
T  37288115 t 37288115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 55241029 - 55240930
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  55241029 caagatgttgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaaattttt 55240930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 25700979 - 25700881
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||||||||||  ||||||||||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  25700979 aagattttgcaagcattgttagatgaattactattgatcattaatcaataatgtacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 25700881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9139516 - 9139612
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||||   ||||||||||||||| |||||||||||||| |||||||||||    
T  9139516 caagatgttgcaagcattactagacgaattactattgatcattaatcaataatc--taatttaaaaatgaatcaaacattaagatcataattaactttt 9139612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 38012568 - 38012648
Alignment:
Q  20 ctagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  38012568 ctagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaacttttt 38012648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4205271 - 4205370
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||| |||||||||||||||||| || || ||| ||||||||| ||||||||||||||| ||||||||| || |||| |||||||||    
T  4205271 caagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaacttttt 4205370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 17168001 - 17168099
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||| |||||||||||||||||| || |||||| ||||||||| ||||||||||||||| ||||||||| || |||| ||| |||||    
T  17168001 aagatgttgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaatttttt 17168099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5047890 - 5047750
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||  ||||||||| ||||| ||||||| | ||||||  ||| ||||||||||||||||||  |||||||| ||||||||||| |||||    
T  5047890 caagatgttgcaagttttactagataaattattattgatcagtaatcaacaataaacaatttaaaaatgaatcgaacattaaaatcaaaattaa-ttttt 5047792  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       ||| |||| |||||||||||||||||||||||||    
T  5047791 tcaaaaaagtctgtttcctgactgcaccgtaaaagctcccaa 5047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 17173578 - 17173676
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||| |||||||||||||||||| || || ||| ||||||||| ||||||||||||||| ||||||||| || |||| ||| |||||    
T  17173578 aagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaatttttt 17173676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 4934133 - 4934040
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa-tttaaaaatgaataaaacattaagatcaaaattaactt 97  Q
    |||||||| |||||| |||||||||| ||||| || |||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||    
T  4934133 atgttgcacgcattaatagatgaatttctattaatcattaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaactt 4934040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42200017 - 42200116
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| ||||| || | |||||||||||||||| ||||||||||| ||| |||||| || ||| ||||||||||||    
T  42200017 caagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaattaatcaaacatcaaaatc-aaattaactttt 42200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 36798477 - 36798570
Alignment:
Q  145 aacaaacctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactatagagaat 238  Q
    |||||||||| | |||||||||||| |||||||||||||| ||||| | ||||||||| || ||||||||||||||||| || ||| |||||||    
T  36798477 aacaaacctgtgaagctggggcgttatcatcaatgaaaggtgctgcaagacttataaatgaagcctcgccaacaccaacgagcctagagagaat 36798570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2325294 - 2325195
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  2325294 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttt 2325195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26357864 - 26357964
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  26357864 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 26357963  T
Q  101 t 101  Q
    |    
T  26357964 t 26357964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35959179 - 35959278
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35959179 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 35959278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 2324647 - 2324557
Alignment:
Q  141 aataaacaaacctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2324647 aataaacaaacctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcaccaacaccaaccagactat 2324557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41961127 - 41961267
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  41961127 caagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaac-tttt 41961225  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |        ||||||| |||||||||||||| ||||||||||    
T  41961226 tcaaaaaattcagtttcctgactgcaccgtagaagctcccaa 41961267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 19424557 - 19424414
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||||| ||||    
T  19424557 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaact-tttt 19424459  T
Q  102 nnnnnnngtcagttttctgactgcaccgtaaaagctcccaataaa 146  Q
           ||||||||  ||||||||||||| ||||||||| ||||    
T  19424458 caaaaaagtcagtttgatgactgcaccgtagaagctcccattaaa 19424414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4763918 - 4764057
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  4763918 caagatattgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 4764017  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||| || ||||||||||| ||||||||    
T  4764018 tttaaaaagtcagtttccttactgcaccgtagaagctccc 4764057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 5881817 - 5881915
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5881817 aagatgttgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 5881915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 33660291 - 33660194
Alignment:
Q  3 agatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  33660291 agatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 33660194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19500831 - 19500739
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaatta 93  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  19500831 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaatta 19500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7006854 - 7006755
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  7006854 caagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattatgattaaaattaacttttt 7006755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18494197 - 18494098
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18494197 caagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 18494098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 19289239 - 19289140
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  19289239 caagatattgcaagcattactagatgaattactattgatcattaatcagaaattaacaatttaaaaatgaattaaacattaagatcaaaattaacttttt 19289140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33709148 - 33709049
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  33709148 caagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 33709049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43648161 - 43648062
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  43648161 caagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 43648062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4167209 - 4167347
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  4167209 caagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaac-tttt 4167307  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||| |||||||||||||||||| ||||||||    
T  4167308 tcaaaaaagtcaattttctgactgcaccgtagaagctccc 4167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 39167280 - 39167186
Alignment:
Q  6 tgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39167280 tgttgctagcattactagatgaattactattaattatgaatcagtaatcaacaatttaaaaatgaataaaacattaagattaaaattaacttttt 39167186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11366297 - 11366197
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  11366297 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttt 11366198  T
Q  100 t 100  Q
    |    
T  11366197 t 11366197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43770764 - 43770665
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  43770764 caagatgttgcaagcattactagatgaatttctattgatcattaattagaaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 43770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 33550899 - 33550760
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaat----cagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33550899 atgttgcaagcattactagatgaataactattgattatttattaaccagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 33550800  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |        ||||||||||||| |||| ||| ||||||||    
T  33550799 tttaaaaattcagttttctgacagcactgtagaagctccc 33550760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 33902317 - 33902439
Alignment:
Q  17 ttactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagttt 116  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||       || |||||    
T  33902317 ttactagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttttaaaaaaagttagttt 33902416  T
Q  117 tctgactgcaccgtaaaagctcc 139  Q
    ||||| ||||||||| |||||||    
T  33902417 tctgattgcaccgtagaagctcc 33902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41465788 - 41465887
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  41465788 caagatgttgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatcgaacattaagatcaaaattaacttttt 41465887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 31862153 - 31862238
Alignment:
Q  15 cattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  31862153 cattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaacttttt 31862238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 27349863 - 27349793
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27349863 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaat 27349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 31570649 - 31570551
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||  |||||||||||||| || |||||| || ||||||||||||||    
T  31570649 aagatgttgcaagcattgctagatgaattactattgatcattaatcagtaatcaaatatttaaaaatgaatcaatcattaaaatgaaaattaacttttt 31570551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37905997 - 37906097
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg-aataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||    
T  37905997 caagatgttgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatgaaatcaaacattaaaatcaaaattaattttt 37906096  T
Q  100 t 100  Q
    |    
T  37906097 t 37906097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44913951 - 44914053
Alignment:
Q  1 caagatgttgcaagcattactaga---tgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactt 97  Q
    ||||||||||||||||||| ||||   |||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  44913951 caagatgttgcaagcattattagaaaatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 44914050  T
Q  98 ttt 100  Q
    |||    
T  44914051 ttt 44914053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 29242046 - 29241963
Alignment:
Q  16 attactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29242046 attactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaactttt 29241963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 18257453 - 18257355
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||| ||||||| ||||||||||||  ||||| || ||||||||||||||    
T  18257453 aagatgttgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaacttttt 18257355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 13711747 - 13711845
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |||| | || |||||||| |||||    
T  13711747 aagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatcatttaaattaaaattaatttttt 13711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4478652 - 4478717
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaa 66  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4478652 caagatgttgcaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 2337883 - 2337807
Alignment:
Q  162 ggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactatagagaat 238  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  2337883 ggggcgttgtcatcaatgaaaggtggtgctaaacttataaacgaagcctcgccaacaccaaccagcctatacagaat 2337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41051216 - 41051117
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| ||||||| |||||||||||  ||||||| |||||||| |||||||||||| |||||||||| ||||||||| || |||||||| |||||    
T  41051216 caagatgttgtaagcattgctagatgaattgttattgatcattaatcaataatcaacaattcaaaaatgaatcaaacattaaaattaaaattaatttttt 41051117  T

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Target: chr2; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 41463505 - 41463407
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| || ||||| ||||| ||||||||||||| |||||||| |||| || ||||||||||||||| || ||||||||| ||||||||||||||    
T  41463505 aagatgttgtaaacattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaacttttt 41463407  T

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Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 2344777 - 2344689
Alignment:
Q  150 acctgaggagctggggcgttgtcatcaatgaaaggggctgctaaacttataaacgatgcctcgccaacaccaaccagactatagagaat 238  Q
    ||||||| ||||||||| ||||||||||| ||||| ||||||| |||||||||||| ||||| |||||||||||||| ||||| |||||    
T  2344777 acctgagaagctggggcattgtcatcaataaaaggtgctgctagacttataaacgaagcctctccaacaccaaccagcctatacagaat 2344689  T

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Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3177226 - 3177362
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| || |||||||||||||||||||||||||| || || ||| ||||||||||||||| ||||| ||| ||||||||| || |||| |||| ||||    
T  3177226 caagatattacaagcattactagatgaattactatttatcatgaataagtaatcaacaatttgaaaataaatcaaacattaaaattaaaagtaac-tttt 3177324  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctc 138  Q
    |       |||||||| |||||||||||||| ||||||    
T  3177325 tcaaaaaagtcagtttcctgactgcaccgtagaagctc 3177362  T

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Target: chr2; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4263992 - 4263926
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaa 67  Q
    |||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||    
T  4263992 caagatgttgcaagcattactagatgaaataatattgatcattgatcagtaatcaacaatttaaaaa 4263926  T

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Target: chr2; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 19314135 - 19314186
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaat 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19314135 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 19314186  T

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Target: chr2; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 45328028 - 45328076
Alignment:
Q  52 atcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 45328076  T

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Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 17054005 - 17053960
Alignment:
Q  43 taatcagtaatcaacaatttaaaaatgaataaaacattaagatcaa 88  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17053960  T

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Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 17071646 - 17071601
Alignment:
Q  43 taatcagtaatcaacaatttaaaaatgaataaaacattaagatcaa 88  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17071601  T

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Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 44286237 - 44286285
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagt 50  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  44286237 aagatgttgcaagcattgttagatgaattactattgatcattaatcagt 44286285  T

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Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43643499 - 43643361
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||    
T  43643499 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaact-ttt 43643401  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||||||||||||||| || ||||||||    
T  43643400 tcaaaaaagtcagttttctgactgcaccatagaagctccc 43643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23854335 - 23854236
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23854335 caagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 23854236  T

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Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16446779 - 16446641
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||    
T  16446779 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatctaacattaaaatcaaaattaact-ttt 16446681  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||| |||||||||||||| ||||||||    
T  16446680 tcaaaaaagtcagtttcctgactgcaccgtagaagctccc 16446641  T

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Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34895248 - 34895348
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34895248 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 34895347  T
Q  101 t 101  Q
    |    
T  34895348 t 34895348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 38644264 - 38644404
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||| ||||    
T  38644264 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaacattaagattaaaattaac-tttt 38644362  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       ||||||||  ||||||||||||||||||||||||    
T  38644363 tcaaaaaagtcagtttcatgactgcaccgtaaaagctcccaa 38644404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 466119 - 466214
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactt 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  466119 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 466214  T

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Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5299850 - 5299751
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5299850 caagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaacttttt 5299751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 7890857 - 7890762
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  7890857 atgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaacttttt 7890762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 16223150 - 16223249
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  16223150 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttt 16223249  T

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Target: chr8; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37970423 - 37970324
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37970423 caagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 37970324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1149536 - 1149398
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  1149536 caagatgttgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa-ttttt 1149438  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||| ||| |||||||||||||| ||||||||    
T  1149437 tcaaaaaagtcaatttcctgactgcaccgtagaagctccc 1149398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 11727311 - 11727449
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||    
T  11727311 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaactttttt 11727410  T
Q  102 nnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
           |||| |||  ||||||||||||| ||||||||    
T  11727411 aaaaaatgtcaatttcatgactgcaccgtagaagctccc 11727449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 35859222 - 35859319
Alignment:
Q  3 agatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35859222 agatgttgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 35859319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24823298 - 24823198
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  24823298 caagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaacttttt 24823199  T
Q  101 t 101  Q
    |    
T  24823198 t 24823198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27082742 - 27082643
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27082742 caagatgttgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttttt 27082643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 35459611 - 35459516
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35459611 atgttgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 35459516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4132590 - 4132492
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  4132590 caagatgttgcaagcattactagatgaattactattgatcattaatttgtaatcaacaatttaaaaatgaattacacattaagatcaaaattaactttt 4132492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 12587869 - 12587967
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  12587869 aagattttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttt 12587967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6098417 - 6098320
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  6098417 caagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcatgattaacttt 6098320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1205213 - 1205353
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||  ||||||||||||||||||||    
T  1205213 caagatgttgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaaacaacaagatcaaaattaacttttt 1205312  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    |       |||| |||||||||| ||||||| ||||||||||    
T  1205313 t-aaaaaagtcaattttctgactacaccgtagaagctcccaa 1205353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44869783 - 44869882
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| || ||||||||||||||    
T  44869783 caagatattgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 44869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34951960 - 34951862
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||  |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  34951960 aagatgttgcaagtcttactacatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 34951862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 8803721 - 8803580
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||    
T  8803721 caagatgttgcaagcattaccagatgaatatactattgatcattaatcagtaatgaacaatttaaaaatgaatcaaacattaaaatcaaaattaact-tt 8803623  T
Q  100 ttnnnnnnngtcagttttctgactgcaccgtaaaagctcccaa 142  Q
    ||       |||| ||| ||||||||||||||||| |||||||    
T  8803622 ttcaaaaaagtcaatttcctgactgcaccgtaaaaactcccaa 8803580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1953892 - 1953793
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  1953892 caagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaattttaaaatgaatcaaacattaagatcaaaattaatttttt 1953793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 41362723 - 41362845
Alignment:
Q  16 attactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttttnnnnnnngtcagtt 115  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||       |||||||    
T  41362723 attactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaa-ttttttcaaaaaagtcagtt 41362821  T
Q  116 ttctgactgcaccgtaaaagctcc 139  Q
    | ||||||||||| || |||||||    
T  41362822 tcctgactgcaccatagaagctcc 41362845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 33198092 - 33198187
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||| || |||||||||||    
T  33198092 atgttgcaagcatcactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaagattaacttttt 33198187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33906498 - 33906634
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||  || | |||||||||||||||| ||||    
T  33906498 caagatgttgcaagcattactagatgaattactattgatcattaatcagcaatca--aatttaaaaatgaatcgaatagtaagatcaaaattaac-tttt 33906594  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       ||||||||||||||||||| ||| ||||||||    
T  33906595 tcaaaaaagtcagttttctgactgcactgtagaagctccc 33906634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 1149823 - 1149756
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg 69  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1149823 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 31933789 - 31933691
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||| |||||  ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||    
T  31933789 aagatattgcagacattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaatttttt 31933691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10555108 - 10554969
Alignment:
Q  1 caagatgttgcaagcattactagatgaattac--tattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    |||||| |||||||||||||||||||||||||  ||||||| |||||   ||||| |||||||||||||||||| ||||||||||||||||||||| |||    
T  10555108 caagatattgcaagcattactagatgaattacactattgatcattaa---gtaataaacaatttaaaaatgaatcaaacattaagatcaaaattaatttt 10555012  T
Q  99 tttnnnnnnngtcagttttctgactgcaccgtaaaagctccca 141  Q
    |||       |||| ||||||||| ||||| || |||||||||    
T  10555011 tttcaaaaaagtcaattttctgaccgcaccatagaagctccca 10554969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 39099019 - 39098923
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||| || ||||||||| || |||||||| ||||||    
T  39099019 atgttgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaattttttt 39098923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40862705 - 40862805
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaattt-aaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||  | || ||||||||||| ||||||| |||||||||| |||||||||||| |||| ||||||||    
T  40862705 caagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaatcaaacattaagattaaaagtaactttt 40862804  T
Q  100 t 100  Q
    |    
T  40862805 t 40862805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 18259366 - 18259464
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||||||||||||||||| || |||||| || ||||||||| ||||    
T  18259366 aagatgttgcaagcattactagatgaattattgttgatcagtaatgagtaatcaacaatttaaaaatgaatcaatcattaaaattaaaattaacctttt 18259464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 30654487 - 30654388
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||| |||||| || ||||||| ||||||||||||| |||||||| ||||||||| ||| ||||| ||||||||||||||||    
T  30654487 caagatgttgcaagcattactaaatgaatatattattgatcattaatcagtaattaacaattt-aaaatgaatcaaatattaaaatcaaaattaactttt 30654389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36694870 - 36694771
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||| |||||||||||||||||| || || ||| ||||||||| ||||||||||| ||| ||||||||| || |||| |||||||||    
T  36694870 caagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaataaatcaaacattaaaattaaaagtaacttttt 36694771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 43025974 - 43026060
Alignment:
Q  15 cattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    ||||| ||||| ||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  43025974 cattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttt 43026060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12876396 - 12876496
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| || ||||||||||||||||||||||| || || ||| ||||||||||| ||| ||||| ||| ||||||||| || |||| |||||||||    
T  12876396 caagatgttacaggcattactagatgaattactatttatcatgaataagtaatcaacagtttgaaaataaatcaaacattaaaattaaaagtaacttttt 12876495  T
Q  101 t 101  Q
    |    
T  12876496 t 12876496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9864434 - 9864505
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaat 72  Q
    ||||||||||||||||||||||||||||| |||| | || || |||| ||||||||||||||||||||||||    
T  9864434 caagatgttgcaagcattactagatgaataactagtaatcatgaatcggtaatcaacaatttaaaaatgaat 9864505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 699437 - 699535
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  699437 caagatgttgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35511370 - 35511232
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35511370 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 35511271  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||| |||||||||||||| ||||||||    
T  35511270 t-aaaaaagtcagtttcctgactgcaccgtagaagctccc 35511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22973970 - 22973871
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  22973970 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 22973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 24886374 - 24886473
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24886374 caagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 24886473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35826374 - 35826275
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35826374 caagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 35826275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 38528125 - 38528026
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  38528125 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 38528026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39573098 - 39573197
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  39573098 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 39573197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25889657 - 25889755
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25889657 caagatgttgaaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttt 25889755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22981080 - 22981218
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22981080 caagatgttgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 22981179  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||||||| ||||||||||| || ||||||||    
T  22981180 t-taaaaagtcagtttcctgactgcaccatagaagctccc 22981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15992428 - 15992329
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  15992428 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 15992329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22255469 - 22255568
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22255469 caagatgttgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 22255568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31705500 - 31705401
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  31705500 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaacttttt 31705401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31786534 - 31786435
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  31786534 caagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaatatcaaaattaacttttt 31786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35504652 - 35504751
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  35504652 caagatgttgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattgacttttt 35504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 42343009 - 42343107
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42343009 aagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 42343107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2888333 - 2888234
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  2888333 caagatgttacaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 2888234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5830179 - 5830278
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatg-aataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  5830179 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttt 5830278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 7693509 - 7693608
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  7693509 aagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttt 7693608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 25669867 - 25669962
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  25669867 atgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 25669962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27330591 - 27330690
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||||    
T  27330591 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaacttttt 27330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33908520 - 33908618
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33908520 caagatgttgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 33908618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12910642 - 12910740
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  12910642 caagatgttgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaactttt 12910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 19120147 - 19120245
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  19120147 aagatgttgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttt 19120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 22019911 - 22020009
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  22019911 aagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaaattaacttttt 22020009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40133672 - 40133810
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  40133672 caagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaac-tttt 40133770  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||| |||||||||||||||||| ||||||||    
T  40133771 tcaaaaaagtcaattttctgactgcaccgtagaagctccc 40133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 43254154 - 43254240
Alignment:
Q  13 agcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43254154 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 43254240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36867049 - 36867187
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| ||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36867049 caagatgttgcaaacattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaacttttt 36867148  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccc 140  Q
    |       |||| |||||||||||||||||| ||||||||    
T  36867149 t-aaaaaagtcaattttctgactgcaccgtagaagctccc 36867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7208752 - 7208653
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  7208752 caagatgttgcaagtattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaacttttt 7208653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8437252 - 8437351
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  8437252 caagatgttgaaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaatattaaaatcaaaattaacttttt 8437351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 8741769 - 8741674
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  8741769 atgttgcaagcatcactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 8741674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17157919 - 17157820
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||    
T  17157919 caagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaacttgacttttt 17157820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28416439 - 28416340
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  28416439 caagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatcaaacattaagattaaaattaacttttt 28416340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35934183 - 35934282
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||    
T  35934183 caagatgttgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattcaaacattaaaattaaaattaacttttt 35934282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 9200512 - 9200610
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||| || |||||||| |||||    
T  9200512 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaattaatttttt 9200610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 36860711 - 36860850
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||| ||||||||||||| || || ||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  36860711 caagatgttgcaagcattactaaatgaattactattaatcatgaattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaattaacttttt 36860810  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccca 141  Q
    |       |||| |||||||||||||||||| |||| ||||    
T  36860811 t-aaaaaagtcaattttctgactgcaccgtagaagcaccca 36860850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 43308547 - 43308449
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||| | ||| |||||||||||||||||    
T  43308547 aagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacgaatcaaatactaaaatcaaaattaacttttt 43308449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5837842 - 5837941
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| || |||||| || ||||||||| ||||    
T  5837842 caagatgttgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaaaattaaaattaacctttt 5837941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 8467017 - 8467112
Alignment:
Q  5 atgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||    
T  8467017 atgttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaataaaattaacttttt 8467112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 25500813 - 25500715
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||| ||| | |||||| ||||||||||||||    
T  25500813 aagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatcaaatactaagattaaaattaacttttt 25500715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 27318376 - 27318237
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa-tttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||  ||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  27318376 aagatgttgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttt 27318277  T
Q  101 tnnnnnnngtcagttttctgactgcaccgtaaaagctccca 141  Q
    |       |||||||||||||||||||| || || ||||||    
T  27318276 t-aaaaaagtcagttttctgactgcaccatagaaactccca 27318237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30969212 - 30969112
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||| |||||| |||||||||||| |||||||| || |||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||    
T  30969212 caagatgctgcaagtattactagatgagttactattaatcattaatcagtaatccacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 30969113  T
Q  101 t 101  Q
    |    
T  30969112 t 30969112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 26269097 - 26269195
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| ||||| |||||||| |||||||| |||| |||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||    
T  26269097 aagatgttgtaagcaatactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaaccaatcattaagattaaaattaacttttt 26269195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 32563428 - 32563526
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||||| ||||| ||||||| ||||||||| ||| |||||||||||||||||| ||||||||| || ||||||||||||||    
T  32563428 aagatgttgcaagaattactagataaattattattgatcattaatcagcaattaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 32563526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 15724786 - 15724874
Alignment:
Q  12 aagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||  | ||||||||||||||    
T  15724786 aagcattactagatgaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaagttaaaattaacttttt 15724874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13956250 - 13956187
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaa 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13956250 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaa 13956187  T

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Target: chr5; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14409229 - 14409130
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||| ||||||||||||||||||||||  |||||||| || |||||||| |||||    
T  14409229 caagatgttgcaaacattactaaatgaattactattgatcattattcagcaatcaacaatttaaaaatgaatcgaacattaaaattaaaattaaattttt 14409130  T

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Target: chr5; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 23116088 - 23116019
Alignment:
Q  31 actattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  23116088 actattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 23116019  T

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Target: chr5; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1429050 - 1428983
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaa---tcaacaatttaaa 65  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||    
T  1429050 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatattcaacaatttaaa 1428983  T

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Target: chr5; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 14919405 - 14919328
Alignment:
Q  22 agatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||| |||||| ||||||||| |||| | ||||||||||||||| ||||||||||||||||||||| |||||    
T  14919405 agatgaattac-attgatcattaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaatttttt 14919328  T

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Target: chr5; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21088654 - 21088557
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||| ||||||||||||||||||||||||| || || ||| | ||||   |||||||||||||||| |||||||||||| ||| |||| |||||    
T  21088654 caagatgttgtaagcattactagatgaattactattaatcatgaataaataat---caatttaaaaatgaatcaaacattaagattaaagttaatttttt 21088558  T

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Target: chr5; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 23954651 - 23954591
Alignment:
Q  40 tattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23954651 tattgatcattaatcaacaatttaaaaatgaattaaacattaagatcataattaacttttt 23954591  T

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Target: scaffold0318 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 12197 - 12295
Alignment:
Q  2 aagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttttt 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  12197 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatcaaacattaagattaaaattaactttttt 12295  T

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Target: scaffold0002 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 415 - 514
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  415 caagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 514  T

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Target: scaffold0002; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 408327 - 408228
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||    
T  408327 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaatttttt 408228  T

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Target: scaffold0002; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 93998 - 93899
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  93998 caagatgttgcaagcattactagatgaattgctattgatcattaatcactaatcaacaattt-aaaatgaatcaaacattaaaatcaaaattaacttttt 93900  T

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Target: scaffold0291 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8174 - 8271
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  8174 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaacttt 8271  T

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Target: scaffold0061 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44243 - 44342
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  44243 caagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaacttttt 44342  T

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Target: scaffold0017 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 154544 - 154445
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  154544 caagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaacttttt 154445  T

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Target: scaffold0022 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 145914 - 145814
Alignment:
Q  1 caagatgttgcaagcattactagatgaat-tactattgattattaatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaactttt 99  Q
    |||||||||||||||||||||| |||||| ||| |||||| ||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||    
T  145914 caagatgttgcaagcattactaaatgaatatacaattgatcattaatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaattaactttt 145815  T
Q  100 t 100  Q
    |    
T  145814 t 145814  T

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Target: scaffold0008 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 267606 - 267662
Alignment:
Q  44 aatcagtaatcaacaatttaaaaatgaataaaacattaagatcaaaattaacttttt 100  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaatttttt 267662  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 101002 - 101058
Alignment:
Q  1 caagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaa 59  Q
    |||||||||||||||||||||| ||| |||||||  ||| |||||||||||||||||||    
T  101002 caagatgttgcaagcattactaaatgcattacta--gatcattaatcagtaatcaacaa 101058  T

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