View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14016_low_14 (Length: 254)

Name: NF14016_low_14
Description: NF14016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14016_low_14
NF14016_low_14
[»] chr3 (23 HSPs)
chr3 (54-254)||(7907307-7907507)
chr3 (14-53)||(17240157-17240196)
chr3 (56-124)||(13223737-13223805)
chr3 (14-53)||(12478504-12478543)
chr3 (11-53)||(12354838-12354880)
chr3 (11-53)||(12361336-12361378)
chr3 (15-53)||(13298235-13298273)
chr3 (15-53)||(13301823-13301861)
chr3 (15-53)||(13312479-13312517)
chr3 (22-55)||(15519816-15519849)
chr3 (21-53)||(18127370-18127402)
chr3 (21-53)||(18135140-18135172)
chr3 (15-54)||(12033083-12033122)
chr3 (22-53)||(12154187-12154218)
chr3 (22-53)||(17497532-17497563)
chr3 (15-53)||(10555686-10555724)
chr3 (19-53)||(12256917-12256951)
chr3 (15-53)||(13323446-13323484)
chr3 (15-53)||(14866223-14866261)
chr3 (23-53)||(16822608-16822638)
chr3 (15-53)||(17132110-17132148)
chr3 (23-53)||(42110540-42110570)
chr3 (22-50)||(12204086-12204114)
[»] scaffold0664 (1 HSPs)
scaffold0664 (14-53)||(3073-3112)
[»] scaffold0333 (1 HSPs)
scaffold0333 (14-53)||(142-181)
[»] scaffold0222 (2 HSPs)
scaffold0222 (14-53)||(17192-17231)
scaffold0222 (14-46)||(3844-3876)
[»] scaffold0146 (1 HSPs)
scaffold0146 (14-53)||(14004-14043)
[»] scaffold0126 (1 HSPs)
scaffold0126 (14-53)||(45542-45581)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-53)||(101573-101612)
[»] scaffold0004 (1 HSPs)
scaffold0004 (14-53)||(117268-117307)
[»] chr8 (19 HSPs)
chr8 (14-53)||(29643025-29643064)
chr8 (14-54)||(14056215-14056255)
chr8 (14-54)||(21298952-21298992)
chr8 (14-53)||(18614643-18614682)
chr8 (14-53)||(20257797-20257836)
chr8 (19-55)||(25112319-25112355)
chr8 (22-53)||(14593539-14593570)
chr8 (22-53)||(19986985-19987016)
chr8 (22-53)||(20838740-20838771)
chr8 (22-53)||(20972819-20972850)
chr8 (15-53)||(6784104-6784142)
chr8 (23-53)||(20004502-20004532)
chr8 (23-53)||(22745059-22745089)
chr8 (15-53)||(24320310-24320348)
chr8 (24-54)||(36444547-36444577)
chr8 (22-55)||(21283380-21283413)
chr8 (23-56)||(21320819-21320852)
chr8 (23-55)||(21684867-21684899)
chr8 (23-55)||(21689216-21689248)
[»] chr6 (13 HSPs)
chr6 (14-53)||(9187868-9187907)
chr6 (14-53)||(8745331-8745370)
chr6 (22-55)||(24721932-24721965)
chr6 (14-54)||(25640304-25640344)
chr6 (14-53)||(8766859-8766898)
chr6 (15-54)||(20007583-20007622)
chr6 (15-53)||(11288309-11288347)
chr6 (23-53)||(23106548-23106578)
chr6 (16-54)||(24563819-24563857)
chr6 (21-54)||(14725564-14725597)
chr6 (22-55)||(19587375-19587408)
chr6 (22-54)||(14374164-14374196)
chr6 (22-54)||(19820221-19820253)
[»] chr2 (22 HSPs)
chr2 (14-53)||(23265513-23265552)
chr2 (14-53)||(23280581-23280620)
chr2 (14-53)||(21908732-21908771)
chr2 (22-54)||(23671901-23671933)
chr2 (22-54)||(23754145-23754177)
chr2 (23-54)||(17635247-17635278)
chr2 (22-53)||(23292282-23292313)
chr2 (22-53)||(24660161-24660192)
chr2 (22-53)||(24661935-24661966)
chr2 (22-53)||(25106280-25106311)
chr2 (22-53)||(25175149-25175180)
chr2 (14-53)||(26885567-26885606)
chr2 (14-53)||(27207344-27207383)
chr2 (23-53)||(8887648-8887678)
chr2 (22-56)||(19036839-19036873)
chr2 (23-53)||(20649430-20649460)
chr2 (11-53)||(22795452-22795494)
chr2 (15-53)||(25180581-25180619)
chr2 (22-55)||(19702280-19702313)
chr2 (16-53)||(27366185-27366222)
chr2 (17-53)||(23167928-23167964)
chr2 (17-53)||(23579185-23579221)
[»] chr1 (22 HSPs)
chr1 (14-53)||(32651944-32651983)
chr1 (14-53)||(11158443-11158482)
chr1 (14-53)||(18713171-18713210)
chr1 (14-53)||(19663160-19663199)
chr1 (22-55)||(21409466-21409499)
chr1 (15-55)||(20850770-20850810)
chr1 (23-55)||(21699442-21699474)
chr1 (23-55)||(23634868-23634900)
chr1 (22-54)||(29553240-29553272)
chr1 (22-53)||(11139908-11139939)
chr1 (22-53)||(15315306-15315337)
chr1 (22-53)||(20940649-20940680)
chr1 (23-54)||(23713551-23713582)
chr1 (23-54)||(31926103-31926134)
chr1 (15-53)||(20857399-20857437)
chr1 (15-53)||(21706655-21706693)
chr1 (15-53)||(21711197-21711235)
chr1 (23-53)||(30490236-30490266)
chr1 (24-53)||(20805692-20805721)
chr1 (14-54)||(20044576-20044615)
chr1 (22-54)||(20823212-20823244)
chr1 (22-54)||(20837012-20837044)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-54)||(121066-121106)
[»] chr4 (15 HSPs)
chr4 (56-124)||(490370-490438)
chr4 (14-53)||(15408503-15408542)
chr4 (14-53)||(40909755-40909794)
chr4 (22-56)||(14554863-14554897)
chr4 (15-53)||(14487034-14487073)
chr4 (23-54)||(14991422-14991453)
chr4 (23-54)||(16485975-16486006)
chr4 (14-53)||(27906649-27906688)
chr4 (14-53)||(56582117-56582156)
chr4 (23-53)||(15003930-15003960)
chr4 (15-53)||(16146498-16146536)
chr4 (23-53)||(17143649-17143679)
chr4 (23-53)||(27848317-27848347)
chr4 (23-53)||(30240378-30240408)
chr4 (22-54)||(26076559-26076591)
[»] scaffold0113 (1 HSPs)
scaffold0113 (14-53)||(26434-26473)
[»] scaffold0034 (2 HSPs)
scaffold0034 (14-53)||(5487-5526)
scaffold0034 (14-53)||(73668-73707)
[»] chr5 (18 HSPs)
chr5 (14-57)||(28908932-28908975)
chr5 (14-57)||(28945327-28945370)
chr5 (21-53)||(21830846-21830878)
chr5 (22-53)||(6403296-6403327)
chr5 (22-53)||(22006531-22006562)
chr5 (22-53)||(22231515-22231546)
chr5 (22-53)||(23560394-23560425)
chr5 (14-53)||(28888986-28889025)
chr5 (14-53)||(28895690-28895729)
chr5 (14-53)||(28924516-28924555)
chr5 (23-53)||(10036464-10036494)
chr5 (23-53)||(15192786-15192816)
chr5 (15-53)||(19237277-19237315)
chr5 (23-53)||(21889902-21889932)
chr5 (22-52)||(22236669-22236699)
chr5 (23-53)||(23443041-23443071)
chr5 (23-55)||(17021564-17021596)
chr5 (15-54)||(22468157-22468197)
[»] scaffold0298 (2 HSPs)
scaffold0298 (23-57)||(980-1014)
scaffold0298 (22-53)||(19689-19720)
[»] scaffold0124 (2 HSPs)
scaffold0124 (23-57)||(15620-15654)
scaffold0124 (22-53)||(10594-10625)
[»] scaffold0061 (1 HSPs)
scaffold0061 (11-53)||(56005-56047)
[»] scaffold0017 (2 HSPs)
scaffold0017 (11-53)||(142586-142628)
scaffold0017 (22-53)||(1767-1798)
[»] scaffold0002 (1 HSPs)
scaffold0002 (22-56)||(371730-371764)
[»] scaffold0669 (1 HSPs)
scaffold0669 (23-56)||(550-583)
[»] scaffold0609 (1 HSPs)
scaffold0609 (14-55)||(5492-5533)
[»] chr7 (20 HSPs)
chr7 (15-56)||(2971632-2971673)
chr7 (14-51)||(16184252-16184289)
chr7 (22-53)||(80896-80927)
chr7 (22-53)||(11854210-11854241)
chr7 (22-53)||(14168340-14168371)
chr7 (22-53)||(14172587-14172618)
chr7 (14-53)||(14231158-14231197)
chr7 (14-53)||(14319258-14319297)
chr7 (22-53)||(15103140-15103171)
chr7 (11-53)||(11218924-11218966)
chr7 (23-53)||(16072851-16072881)
chr7 (15-53)||(16091453-16091491)
chr7 (23-53)||(16474924-16474954)
chr7 (15-53)||(20906100-20906138)
chr7 (15-53)||(29180747-29180785)
chr7 (22-56)||(35961527-35961561)
chr7 (23-53)||(41780694-41780724)
chr7 (22-51)||(10521114-10521143)
chr7 (23-51)||(12800409-12800437)
chr7 (21-53)||(21230612-21230644)
[»] scaffold1419 (1 HSPs)
scaffold1419 (14-54)||(1587-1627)
[»] scaffold0405 (2 HSPs)
scaffold0405 (21-53)||(6461-6493)
scaffold0405 (21-53)||(10819-10851)
[»] scaffold0139 (1 HSPs)
scaffold0139 (21-53)||(27224-27256)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-54)||(31151-31183)
[»] scaffold0037 (1 HSPs)
scaffold0037 (22-54)||(45677-45709)
[»] scaffold1469 (1 HSPs)
scaffold1469 (14-53)||(1727-1766)
[»] scaffold1032 (1 HSPs)
scaffold1032 (22-53)||(2434-2465)
[»] scaffold0720 (1 HSPs)
scaffold0720 (14-53)||(3041-3080)
[»] scaffold0688 (1 HSPs)
scaffold0688 (23-54)||(5402-5433)
[»] scaffold0367 (1 HSPs)
scaffold0367 (22-53)||(12476-12507)
[»] scaffold0324 (1 HSPs)
scaffold0324 (22-53)||(1655-1686)
[»] scaffold0301 (1 HSPs)
scaffold0301 (22-53)||(4555-4586)
[»] scaffold0211 (1 HSPs)
scaffold0211 (22-53)||(13984-14015)
[»] scaffold0205 (1 HSPs)
scaffold0205 (22-53)||(28583-28614)
[»] scaffold0192 (1 HSPs)
scaffold0192 (14-53)||(7930-7969)
[»] scaffold0156 (1 HSPs)
scaffold0156 (22-53)||(26931-26962)
[»] scaffold0121 (1 HSPs)
scaffold0121 (22-53)||(10606-10637)
[»] scaffold0094 (1 HSPs)
scaffold0094 (22-53)||(52623-52654)
[»] scaffold0078 (1 HSPs)
scaffold0078 (22-53)||(16234-16265)
[»] scaffold0053 (2 HSPs)
scaffold0053 (22-53)||(78735-78766)
scaffold0053 (15-53)||(79129-79167)
[»] scaffold0032 (1 HSPs)
scaffold0032 (22-53)||(50751-50782)
[»] scaffold0031 (2 HSPs)
scaffold0031 (23-54)||(122280-122311)
scaffold0031 (23-54)||(133156-133187)
[»] scaffold0028 (1 HSPs)
scaffold0028 (22-53)||(70125-70156)
[»] scaffold0011 (3 HSPs)
scaffold0011 (22-53)||(148301-148332)
scaffold0011 (22-53)||(186627-186658)
scaffold0011 (22-53)||(196253-196284)
[»] scaffold0007 (1 HSPs)
scaffold0007 (14-53)||(274059-274098)
[»] scaffold1318 (1 HSPs)
scaffold1318 (15-53)||(1596-1634)
[»] scaffold0395 (1 HSPs)
scaffold0395 (23-53)||(1019-1049)
[»] scaffold0352 (1 HSPs)
scaffold0352 (23-53)||(4147-4177)
[»] scaffold0326 (2 HSPs)
scaffold0326 (23-53)||(3924-3954)
scaffold0326 (23-53)||(19106-19136)
[»] scaffold0299 (1 HSPs)
scaffold0299 (23-53)||(3670-3700)
[»] scaffold0282 (1 HSPs)
scaffold0282 (23-53)||(22868-22898)
[»] scaffold0249 (1 HSPs)
scaffold0249 (23-53)||(5571-5601)
[»] scaffold0244 (2 HSPs)
scaffold0244 (23-53)||(1130-1160)
scaffold0244 (23-53)||(14804-14834)
[»] scaffold0220 (1 HSPs)
scaffold0220 (22-56)||(11706-11740)
[»] scaffold0180 (1 HSPs)
scaffold0180 (23-53)||(13777-13807)
[»] scaffold0169 (1 HSPs)
scaffold0169 (23-53)||(7328-7358)
[»] scaffold0091 (2 HSPs)
scaffold0091 (23-53)||(21561-21591)
scaffold0091 (23-53)||(25758-25788)
[»] scaffold0072 (1 HSPs)
scaffold0072 (15-53)||(49609-49647)
[»] scaffold0058 (1 HSPs)
scaffold0058 (23-53)||(26046-26076)
[»] scaffold0054 (2 HSPs)
scaffold0054 (23-53)||(59245-59275)
scaffold0054 (23-53)||(60809-60839)
[»] scaffold0039 (2 HSPs)
scaffold0039 (15-53)||(160-198)
scaffold0039 (23-53)||(2576-2606)
[»] scaffold0023 (1 HSPs)
scaffold0023 (15-53)||(135816-135854)
[»] scaffold0022 (2 HSPs)
scaffold0022 (22-56)||(37463-37497)
scaffold0022 (22-56)||(135523-135557)
[»] scaffold0019 (1 HSPs)
scaffold0019 (23-53)||(13924-13954)
[»] scaffold0947 (1 HSPs)
scaffold0947 (24-53)||(3000-3029)
[»] scaffold0610 (1 HSPs)
scaffold0610 (22-55)||(6878-6911)
[»] scaffold0261 (1 HSPs)
scaffold0261 (24-53)||(8112-8141)
[»] scaffold0193 (1 HSPs)
scaffold0193 (24-53)||(1722-1751)
[»] scaffold0129 (1 HSPs)
scaffold0129 (14-55)||(44905-44945)
[»] scaffold0107 (1 HSPs)
scaffold0107 (21-53)||(40185-40217)
[»] scaffold0106 (2 HSPs)
scaffold0106 (22-54)||(45579-45611)
scaffold0106 (22-54)||(49852-49884)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 54 - 254
Target Start/End: Complemental strand, 7907507 - 7907307
Alignment:
Q  54 gtgactggatcacctccttttcaggtagaactaatgattttctaggttgtttagttttacggtgcctcacatgccaatgaacaatagtcatatgaaagag 153  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| ||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  7907507 gtgactggatcacctccttttcagagagaactaatgcttttctacgttgtttcgttttacactgcctcacatgccaatgaacaatagccatatgaaagag 7907408  T
Q  154 acctacatttaacaagagtctttggataagatagcaaagactctattccaatttaaataaaagtctttgatttaaatccaatcattaaaatgcaacaata 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7907407 acctacatttaacaagagtctttggataagatagcaaagactctattccaatttaaataaaagtctttgatttaaatccaatcatttaaatgcaacaata 7907308  T
Q  254 t 254  Q
    |    
T  7907307 t 7907307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 17240196 - 17240157
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17240196 ataattctaaaataaataaaataacgactagggcgttaca 17240157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 13223805 - 13223737
Alignment:
Q  56 gactggatcacctccttttcaggtagaactaatgattttctaggttgtttagttttacggtgcctcaca 124  Q
    ||||||||||||||||||||||| ||||||||   |||||| |||||||| |||||||  |||||||||    
T  13223805 gactggatcacctccttttcagggagaactaaaacttttctgggttgtttggttttacactgcctcaca 13223737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 12478543 - 12478504
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  12478543 ataattccaaaataaataaaataacgactagggcgttaca 12478504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 12354880 - 12354838
Alignment:
Q  11 tagataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  12354880 tagataattccaaaataaataaaacaacgactagggcgttaca 12354838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 12361378 - 12361336
Alignment:
Q  11 tagataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  12361378 tagataattccaaaataaataaaacaacgactagggcgttaca 12361336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 13298273 - 13298235
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13298273 taattctaaaataaataaattaacgactagggcgttaca 13298235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 13301861 - 13301823
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13301861 taattctaaaataaataaattaacgactagggcgttaca 13301823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 13312517 - 13312479
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13312517 taattctaaaataaataaattaacgactagggcgttaca 13312479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 15519816 - 15519849
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||||||||||||||||||||||||    
T  15519816 aaaataaataaaataacgactagggcgttacagt 15519849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 18127402 - 18127370
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||||    
T  18127402 taaaataaataaaataacgactagggcgttaca 18127370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 18135172 - 18135140
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||||    
T  18135172 taaaataaataaaataacgactagggcgttaca 18135140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 12033122 - 12033083
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  12033122 taattctaaaaataataaaataacgactagggcgttacag 12033083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 12154187 - 12154218
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  12154187 aaaataaataaaataacgactagggcgttaca 12154218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 17497532 - 17497563
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  17497532 aaaataaataaaataacgactagggcgttaca 17497563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 10555686 - 10555724
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  10555686 taattctaaaaataataaaataacgactagggcgttaca 10555724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 12256917 - 12256951
Alignment:
Q  19 tctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||| ||||||||||||||||||||||||    
T  12256917 tctaaaataattaaaataacgactagggcgttaca 12256951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 13323484 - 13323446
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  13323484 taattctaaaataaataaattaacgacttgggcgttaca 13323446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 14866223 - 14866261
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  14866223 taattctaaaaataataaaataacgactagggcgttaca 14866261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 16822638 - 16822608
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  16822638 aaataaataaaataacgactagggcgttaca 16822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 17132110 - 17132148
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  17132110 taattctaaaaataataaaataacgactagggcgttaca 17132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 42110540 - 42110570
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  42110540 aaataaataaaataacgactagggcgttaca 42110570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 12204086 - 12204114
Alignment:
Q  22 aaaataaataaaataacgactagggcgtt 50  Q
    |||||||||||||||||||||||||||||    
T  12204086 aaaataaataaaataacgactagggcgtt 12204114  T

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Target: scaffold0664 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 3073 - 3112
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3073 ataattctaaaataaataaaataacgactagggcgttaca 3112  T

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Target: scaffold0333 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 142 - 181
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  142 ataattctaaaataaataaaataacgactagggcgttaca 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 17192 - 17231
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17192 ataattctaaaataaataaaataacgactagggcgttaca 17231  T

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Target: scaffold0222; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 3876 - 3844
Alignment:
Q  14 ataattctaaaataaataaaataacgactaggg 46  Q
    ||||||| |||||||||||||||||||||||||    
T  3876 ataattccaaaataaataaaataacgactaggg 3844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 14004 - 14043
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14004 ataattctaaaataaataaaataacgactagggcgttaca 14043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 45542 - 45581
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45542 ataattctaaaataaataaaataacgactagggcgttaca 45581  T

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Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 101612 - 101573
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  101612 ataattctaaaataaataaaataacgactagggcgttaca 101573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 117268 - 117307
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  117268 ataattctaaaataaataaaataacgactagggcgttaca 117307  T

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Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 29643064 - 29643025
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29643064 ataattctaaaataaataaaataacgactagggcgttaca 29643025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 14056255 - 14056215
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacag 54  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  14056255 ataattccaaaataaataaaataacgactagggcgttacag 14056215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 21298992 - 21298952
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacag 54  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  21298992 ataattccaaaataaataaaataacgactagggcgttacag 21298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 18614643 - 18614682
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  18614643 ataattctaaaataaataaaatagcgactagggcgttaca 18614682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 20257836 - 20257797
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  20257836 ataattccaaaataaataaaataacgactagggcgttaca 20257797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 25112319 - 25112355
Alignment:
Q  19 tctaaaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25112319 tctaaaataaataaaataacgactaggacgttacagt 25112355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 14593570 - 14593539
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  14593570 aaaataaataaaataacgactagggcgttaca 14593539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 19987016 - 19986985
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  19987016 aaaataaataaaataacgactagggcgttaca 19986985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 20838771 - 20838740
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  20838771 aaaataaataaaataacgactagggcgttaca 20838740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 20972850 - 20972819
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  20972850 aaaataaataaaataacgactagggcgttaca 20972819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 6784142 - 6784104
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  6784142 taattctaaaaataataaaataacgactagggcgttaca 6784104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 20004532 - 20004502
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  20004532 aaataaataaaataacgactagggcgttaca 20004502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 22745059 - 22745089
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  22745059 aaataaataaaataacgactagggcgttaca 22745089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 24320348 - 24320310
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  24320348 taattctaaaaataataaaataacgactagggcgttaca 24320310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 36444577 - 36444547
Alignment:
Q  24 aataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||||||||    
T  36444577 aataaataaaataacgactagggcgttacag 36444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 21283380 - 21283413
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||| |||||||||||||||||||||    
T  21283380 aaaataaataaattaacgactagggcgttacagt 21283413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 21320852 - 21320819
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||||||| ||||||||||||||||||||||    
T  21320852 aaataaataaattaacgactagggcgttacagtg 21320819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 21684899 - 21684867
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||||| |||||||||||||||||    
T  21684899 aaataaataaaataatgactagggcgttacagt 21684867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 21689248 - 21689216
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||||| |||||||||||||||||    
T  21689248 aaataaataaaataatgactagggcgttacagt 21689216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 9187868 - 9187907
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9187868 ataattctaaaataaataaaataacgactagggcgttaca 9187907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 8745370 - 8745331
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  8745370 ataattccaaaataaataaaataacgactagggcgttaca 8745331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 24721932 - 24721965
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||||||||||||||||||||||||    
T  24721932 aaaataaataaaataacgactagggcgttacagt 24721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 25640304 - 25640344
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  25640304 ataattctaaaaataataaaataacgactagggcgttacag 25640344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 8766898 - 8766859
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  8766898 ataattccaaaataaataaaataatgactagggcgttaca 8766859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 20007622 - 20007583
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  20007622 taattctaaaaataataaaataacgactagggcgttacag 20007583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 11288347 - 11288309
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  11288347 taattctaaaaataataaaataacgactagggcgttaca 11288309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 23106548 - 23106578
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  23106548 aaataaataaaataacgactagggcgttaca 23106578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 24563819 - 24563857
Alignment:
Q  16 aattctaaaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  24563819 aattctaaaaataataaaataacgactagggcgttacag 24563857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 14725564 - 14725597
Alignment:
Q  21 taaaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  14725564 taaaataaataaattaacgactagggcgttacag 14725597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 19587408 - 19587375
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||| |||||||||||||||||||||    
T  19587408 aaaataaataaattaacgactagggcgttacagt 19587375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 14374196 - 14374164
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||| ||||||||||||||||||||    
T  14374196 aaaataaataaattaacgactagggcgttacag 14374164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 19820221 - 19820253
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||| |||||||||||||||    
T  19820221 aaaataaataaaataacaactagggcgttacag 19820253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 23265513 - 23265552
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23265513 ataattctaaaataaataaaataacgactagggcgttaca 23265552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 23280581 - 23280620
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23280581 ataattctaaaataaataaaataacgactagggcgttaca 23280620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 21908732 - 21908771
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21908732 ataattctaaaatgaataaaataacgactagggcgttaca 21908771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 23671933 - 23671901
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||||||||||    
T  23671933 aaaataaataaaataacgactagggcgttacag 23671901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 23754145 - 23754177
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||||||||||    
T  23754145 aaaataaataaaataacgactagggcgttacag 23754177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 17635247 - 17635278
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  17635247 aaataaataaaataacgactagggcgttacag 17635278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 23292282 - 23292313
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  23292282 aaaataaataaaataacgactagggcgttaca 23292313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 24660161 - 24660192
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  24660161 aaaataaataaaataacgactagggcgttaca 24660192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 24661935 - 24661966
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  24661935 aaaataaataaaataacgactagggcgttaca 24661966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 25106311 - 25106280
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  25106311 aaaataaataaaataacgactagggcgttaca 25106280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 25175149 - 25175180
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  25175149 aaaataaataaaataacgactagggcgttaca 25175180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 26885567 - 26885606
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  26885567 ataattctaaaaataataaaataacgactagggcgttaca 26885606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 27207383 - 27207344
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  27207383 ataattctaaaaataataaaataacgactagggcgttaca 27207344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 8887678 - 8887648
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  8887678 aaataaataaaataacgactagggcgttaca 8887648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 19036839 - 19036873
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||||||||| |||||||||||||||||||||    
T  19036839 aaaataaataaaacaacgactagggcgttacagtg 19036873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 20649430 - 20649460
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  20649430 aaataaataaaataacgactagggcgttaca 20649460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 22795494 - 22795452
Alignment:
Q  11 tagataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||    
T  22795494 tagaaaattccaaaataaataaaacaacgactagggcgttaca 22795452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 25180619 - 25180581
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  25180619 taattctaaaaataataaaataacgactagggcgttaca 25180581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 19702313 - 19702280
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||| |||||||||||||||||||||    
T  19702313 aaaataaataaattaacgactagggcgttacagt 19702280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 27366222 - 27366185
Alignment:
Q  16 aattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  27366222 aattctaaaaataataaaataacgactagggcgttaca 27366185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 23167964 - 23167928
Alignment:
Q  17 attctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  23167964 attctaaaataactaaaataacaactagggcgttaca 23167928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 23579221 - 23579185
Alignment:
Q  17 attctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  23579221 attctaaaataactaaaataacaactagggcgttaca 23579185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 32651944 - 32651983
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32651944 ataattctaaaataaataaaataacgactagggcgttaca 32651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 11158443 - 11158482
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  11158443 ataattccaaaataaataaaataacgactagggcgttaca 11158482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 18713171 - 18713210
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18713171 ataattctaaaataaataaaataatgactagggcgttaca 18713210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 19663199 - 19663160
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19663199 ataattctaaaataaataaattaacgactagggcgttaca 19663160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 21409499 - 21409466
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||||||||||||||||||||||||    
T  21409499 aaaataaataaaataacgactagggcgttacagt 21409466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 20850810 - 20850770
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  20850810 taattctaaaaataataaaataacgactagggcgttacagt 20850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 21699442 - 21699474
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||||||||||||||||||||||||    
T  21699442 aaataaataaaataacgactagggcgttacagt 21699474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 23634868 - 23634900
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||||||||||||||||||||||||    
T  23634868 aaataaataaaataacgactagggcgttacagt 23634900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 29553272 - 29553240
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||||||||||    
T  29553272 aaaataaataaaataacgactagggcgttacag 29553240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 11139939 - 11139908
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  11139939 aaaataaataaaataacgactagggcgttaca 11139908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 15315337 - 15315306
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  15315337 aaaataaataaaataacgactagggcgttaca 15315306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 20940680 - 20940649
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  20940680 aaaataaataaaataacgactagggcgttaca 20940649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 23713551 - 23713582
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  23713551 aaataaataaaataacgactagggcgttacag 23713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 31926134 - 31926103
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  31926134 aaataaataaaataacgactagggcgttacag 31926103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 20857437 - 20857399
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  20857437 taattctaaaaataataaaataacgactagggcgttaca 20857399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 21706655 - 21706693
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  21706655 taattctaaaaataataaaataacgactagggcgttaca 21706693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 21711197 - 21711235
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  21711197 taattctaaaaataataaaataacgactagggcgttaca 21711235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 30490266 - 30490236
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  30490266 aaataaataaaataacgactagggcgttaca 30490236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 20805692 - 20805721
Alignment:
Q  24 aataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||    
T  20805692 aataaataaaataacgactagggcgttaca 20805721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20044615 - 20044576
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  20044615 ataattctaaaataaataaaat-actactagggcgttacag 20044576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 20823244 - 20823212
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||| ||||||||||||||||||||    
T  20823244 aaaataaataaattaacgactagggcgttacag 20823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 20837044 - 20837012
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||| ||||||||||||||||||||    
T  20837044 aaaataaataaattaacgactagggcgttacag 20837012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 121106 - 121066
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacag 54  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  121106 ataattccaaaataaataaaataacgactagggcgttacag 121066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 490370 - 490438
Alignment:
Q  56 gactggatcacctccttttcaggtagaactaatgattttctaggttgtttagttttacggtgcctcaca 124  Q
    ||||||||||||||||||||||| ||||||||   |||||| |||||||| |||||||  |||||||||    
T  490370 gactggatcacctccttttcagggagaactaaaacttttctgggttgtttggttttacactgcctcaca 490438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 15408503 - 15408542
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15408503 ataattccaaaataaataaaataacgactagggcgttaca 15408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 40909755 - 40909794
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  40909755 ataattccaaaataaataaaataacgactagggcgttaca 40909794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 14554897 - 14554863
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    |||||||||||||||||||||||||||||||||||    
T  14554897 aaaataaataaaataacgactagggcgttacagtg 14554863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 14487034 - 14487073
Alignment:
Q  15 taattctaaaataaataaaa-taacgactagggcgttaca 53  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  14487034 taattctaaaataaataaaattaacgactagggcgttaca 14487073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 14991453 - 14991422
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  14991453 aaataaataaaataacgactagggcgttacag 14991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 16485975 - 16486006
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  16485975 aaataaataaaataacgactagggcgttacag 16486006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 27906649 - 27906688
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  27906649 ataattctaaaaataataaaataacgactagggcgttaca 27906688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 56582156 - 56582117
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  56582156 ataattctaaaataaataaaataacagctagggcgttaca 56582117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 15003960 - 15003930
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  15003960 aaataaataaaataacgactagggcgttaca 15003930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 16146536 - 16146498
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  16146536 taattctaaaaataataaaataacgactagggcgttaca 16146498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 17143649 - 17143679
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  17143649 aaataaataaaataacgactagggcgttaca 17143679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 27848347 - 27848317
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  27848347 aaataaataaaataacgactagggcgttaca 27848317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 30240378 - 30240408
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  30240378 aaataaataaaataacgactagggcgttaca 30240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 26076591 - 26076559
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||| ||||||||||||||||||||    
T  26076591 aaaataaataaattaacgactagggcgttacag 26076559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 26473 - 26434
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  26473 ataattcaaaaataaataaaataacgactagggcgttaca 26434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 5526 - 5487
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  5526 ataattccaaaataaataaaataacgactagggcgttaca 5487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 73668 - 73707
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  73668 ataattctaaaaataataaaataacgactagggcgttaca 73707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 28908975 - 28908932
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacagtga 57  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  28908975 ataattctaaaaataataaaataacgactagggcgttacagtga 28908932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 28945370 - 28945327
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacagtga 57  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  28945370 ataattctaaaaataataaaataacgactagggcgttacagtga 28945327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 21830846 - 21830878
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||||    
T  21830846 taaaataaataaaataacgactagggcgttaca 21830878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 6403327 - 6403296
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  6403327 aaaataaataaaataacgactagggcgttaca 6403296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 22006562 - 22006531
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  22006562 aaaataaataaaataacgactagggcgttaca 22006531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 22231546 - 22231515
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  22231546 aaaataaataaaataacgactagggcgttaca 22231515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 23560425 - 23560394
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  23560425 aaaataaataaaataacgactagggcgttaca 23560394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 28889025 - 28888986
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  28889025 ataattctaaaaataataaaataacgactagggcgttaca 28888986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 28895729 - 28895690
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  28895729 ataattctaaaaataataaaataacgactagggcgttaca 28895690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 28924555 - 28924516
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  28924555 ataattctaaaaataataaaataacgactagggcgttaca 28924516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 10036464 - 10036494
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  10036464 aaataaataaaataacgactagggcgttaca 10036494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 15192816 - 15192786
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  15192816 aaataaataaaataacgactagggcgttaca 15192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 19237277 - 19237315
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  19237277 taattctaaaaataataaaataacgactagggcgttaca 19237315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 21889902 - 21889932
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  21889902 aaataaataaaataacgactagggcgttaca 21889932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 22236699 - 22236669
Alignment:
Q  22 aaaataaataaaataacgactagggcgttac 52  Q
    |||||||||||||||||||||||||||||||    
T  22236699 aaaataaataaaataacgactagggcgttac 22236669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 23443071 - 23443041
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  23443071 aaataaataaaataacgactagggcgttaca 23443041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 17021596 - 17021564
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagt 55  Q
    |||||| ||||||||||||||||||||||||||    
T  17021596 aaataattaaaataacgactagggcgttacagt 17021564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22468157 - 22468197
Alignment:
Q  15 taattctaaaata-aataaaataacgactagggcgttacag 54  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  22468157 taattctaaaaaataataaaataacgactagggcgttacag 22468197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 980 - 1014
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagtga 57  Q
    |||||||||||||||||||||||||||||||||||    
T  980 aaataaataaaataacgactagggcgttacagtga 1014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 19689 - 19720
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  19689 aaaataaataaaataacgactagggcgttaca 19720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 15654 - 15620
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagtga 57  Q
    |||||||||||||||||||||||||||||||||||    
T  15654 aaataaataaaataacgactagggcgttacagtga 15620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 10594 - 10625
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  10594 aaaataaataaaataacgactagggcgttaca 10625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 56047 - 56005
Alignment:
Q  11 tagataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  56047 tagataattccaaaataaataaaacaacgactagggcgttaca 56005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 142586 - 142628
Alignment:
Q  11 tagataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  142586 tagataattccaaaataaataaaacaacgactagggcgttaca 142628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 1798 - 1767
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  1798 aaaataaataaaataacgactagggcgttaca 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 371730 - 371764
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    |||||||||||||||||||||||||||||||||||    
T  371730 aaaataaataaaataacgactagggcgttacagtg 371764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 583 - 550
Alignment:
Q  23 aaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||||||||||||||||||||||||||||||    
T  583 aaataaataaaataacgactagggcgttacagtg 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 5533 - 5492
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacagt 55  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  5533 ataattctaaaaataataaaataacgactagggcgttacagt 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 2971632 - 2971673
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttacagtg 56  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  2971632 taattctaaaaataataaaataacgactagggcgttacagtg 2971673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 16184289 - 16184252
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgtta 51  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  16184289 ataattccaaaataaataaaataacgactagggcgtta 16184252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 80927 - 80896
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  80927 aaaataaataaaataacgactagggcgttaca 80896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 11854241 - 11854210
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  11854241 aaaataaataaaataacgactagggcgttaca 11854210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 14168371 - 14168340
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  14168371 aaaataaataaaataacgactagggcgttaca 14168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 14172618 - 14172587
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  14172618 aaaataaataaaataacgactagggcgttaca 14172587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 14231158 - 14231197
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  14231158 ataattctaaaaataataaaataacgactagggcgttaca 14231197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 14319297 - 14319258
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  14319297 ataattctaaaaataataaaataacgactagggcgttaca 14319258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 15103171 - 15103140
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  15103171 aaaataaataaaataacgactagggcgttaca 15103140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 11218966 - 11218924
Alignment:
Q  11 tagataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||| || |||||||||||| |||||||||||||||||||    
T  11218966 tagataaatccaaaataaataaattaacgactagggcgttaca 11218924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 16072881 - 16072851
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  16072881 aaataaataaaataacgactagggcgttaca 16072851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 16091453 - 16091491
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  16091453 taattctaaaaataataaaataacgactagggcgttaca 16091491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 16474954 - 16474924
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  16474954 aaataaataaaataacgactagggcgttaca 16474924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 20906138 - 20906100
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  20906138 taattctaaaaataataaaataacgactagggcgttaca 20906100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 29180785 - 29180747
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  29180785 taattctaaaaataataaaataacgactagggcgttaca 29180747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 35961561 - 35961527
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||| |||||||||||||||||||||||||||    
T  35961561 aaaataattaaaataacgactagggcgttacagtg 35961527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 41780724 - 41780694
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  41780724 aaataaataaaataacgactagggcgttaca 41780694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 10521114 - 10521143
Alignment:
Q  22 aaaataaataaaataacgactagggcgtta 51  Q
    ||||||||||||||||||||||||||||||    
T  10521114 aaaataaataaaataacgactagggcgtta 10521143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 12800437 - 12800409
Alignment:
Q  23 aaataaataaaataacgactagggcgtta 51  Q
    |||||||||||||||||||||||||||||    
T  12800437 aaataaataaaataacgactagggcgtta 12800409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 21230644 - 21230612
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||| |||||||||||||||||||    
T  21230644 taaaataaataaattaacgactagggcgttaca 21230612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 1627 - 1587
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  1627 ataattctaaaaataataaaataacgactagggcgttacag 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 6493 - 6461
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||||    
T  6493 taaaataaataaaataacgactagggcgttaca 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 10851 - 10819
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||| ||||||||||||||||||||||    
T  10851 taaaataaattaaataacgactagggcgttaca 10819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 27224 - 27256
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||||    
T  27224 taaaataaataaaataacgactagggcgttaca 27256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 31151 - 31183
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||||||||||    
T  31151 aaaataaataaaataacgactagggcgttacag 31183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 45677 - 45709
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||||||||||    
T  45677 aaaataaataaaataacgactagggcgttacag 45709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 1727 - 1766
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  1727 ataattctaaaaataataaaataacgactagggcgttaca 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 2465 - 2434
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  2465 aaaataaataaaataacgactagggcgttaca 2434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 3080 - 3041
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  3080 ataattctaaaaataataaaataacgactagggcgttaca 3041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 5402 - 5433
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  5402 aaataaataaaataacgactagggcgttacag 5433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 12507 - 12476
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  12507 aaaataaataaaataacgactagggcgttaca 12476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 1686 - 1655
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  1686 aaaataaataaaataacgactagggcgttaca 1655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 4555 - 4586
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  4555 aaaataaataaaataacgactagggcgttaca 4586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 13984 - 14015
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  13984 aaaataaataaaataacgactagggcgttaca 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 28583 - 28614
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  28583 aaaataaataaaataacgactagggcgttaca 28614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 7930 - 7969
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  7930 ataattcctaaataaataaaataacgactagggcgttaca 7969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 26931 - 26962
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  26931 aaaataaataaaataacgactagggcgttaca 26962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 10606 - 10637
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  10606 aaaataaataaaataacgactagggcgttaca 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 52623 - 52654
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  52623 aaaataaataaaataacgactagggcgttaca 52654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 16265 - 16234
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  16265 aaaataaataaaataacgactagggcgttaca 16234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 78766 - 78735
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  78766 aaaataaataaaataacgactagggcgttaca 78735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 79167 - 79129
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  79167 taattctaaaaataataaaataacgactagggcgttaca 79129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 50751 - 50782
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  50751 aaaataaataaaataacgactagggcgttaca 50782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 122280 - 122311
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  122280 aaataaataaaataacgactagggcgttacag 122311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 133156 - 133187
Alignment:
Q  23 aaataaataaaataacgactagggcgttacag 54  Q
    ||||||||||||||||||||||||||||||||    
T  133156 aaataaataaaataacgactagggcgttacag 133187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 70125 - 70156
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  70125 aaaataaataaaataacgactagggcgttaca 70156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 148301 - 148332
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  148301 aaaataaataaaataacgactagggcgttaca 148332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 186658 - 186627
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  186658 aaaataaataaaataacgactagggcgttaca 186627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 196284 - 196253
Alignment:
Q  22 aaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||||    
T  196284 aaaataaataaaataacgactagggcgttaca 196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 274059 - 274098
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  274059 ataattctaaaaataataaaataacgactagggcgttaca 274098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 1634 - 1596
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  1634 taattctaaaaataataaaataacgactagggcgttaca 1596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 1049 - 1019
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  1049 aaataaataaaataacgactagggcgttaca 1019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 4177 - 4147
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  4177 aaataaataaaataacgactagggcgttaca 4147  T

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Target: scaffold0326 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 3954 - 3924
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  3954 aaataaataaaataacgactagggcgttaca 3924  T

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Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 19136 - 19106
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  19136 aaataaataaaataacgactagggcgttaca 19106  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 3670 - 3700
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  3670 aaataaataaaataacgactagggcgttaca 3700  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 22898 - 22868
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  22898 aaataaataaaataacgactagggcgttaca 22868  T

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Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 5601 - 5571
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  5601 aaataaataaaataacgactagggcgttaca 5571  T

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Target: scaffold0244 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 1130 - 1160
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  1130 aaataaataaaataacgactagggcgttaca 1160  T

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Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 14804 - 14834
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  14804 aaataaataaaataacgactagggcgttaca 14834  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 11706 - 11740
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||| |||||||||||||||||||||||||||    
T  11706 aaaataattaaaataacgactagggcgttacagtg 11740  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 13777 - 13807
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  13777 aaataaataaaataacgactagggcgttaca 13807  T

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Target: scaffold0169 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 7328 - 7358
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  7328 aaataaataaaataacgactagggcgttaca 7358  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 21591 - 21561
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  21591 aaataaataaaataacgactagggcgttaca 21561  T

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Target: scaffold0091; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 25788 - 25758
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  25788 aaataaataaaataacgactagggcgttaca 25758  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 49647 - 49609
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  49647 taattctaaaaataataaaataacgactagggcgttaca 49609  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 26046 - 26076
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  26046 aaataaataaaataacgactagggcgttaca 26076  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 59275 - 59245
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  59275 aaataaataaaataacgactagggcgttaca 59245  T

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Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 60839 - 60809
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  60839 aaataaataaaataacgactagggcgttaca 60809  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 160 - 198
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  160 taattctaaaaagaataaaataacgactagggcgttaca 198  T

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Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 2606 - 2576
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  2606 aaataaataaaataacgactagggcgttaca 2576  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 135816 - 135854
Alignment:
Q  15 taattctaaaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  135816 taattctaaaaataataaaataacgactagggcgttaca 135854  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 37497 - 37463
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||||||||||||| |||||||||||||||||    
T  37497 aaaataaataaaataacaactagggcgttacagtg 37463  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 135557 - 135523
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagtg 56  Q
    ||||||||||||||||| |||||||||||||||||    
T  135557 aaaataaataaaataacaactagggcgttacagtg 135523  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Original strand, 13924 - 13954
Alignment:
Q  23 aaataaataaaataacgactagggcgttaca 53  Q
    |||||||||||||||||||||||||||||||    
T  13924 aaataaataaaataacgactagggcgttaca 13954  T

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Target: scaffold0947 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 3029 - 3000
Alignment:
Q  24 aataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||    
T  3029 aataaataaaataacgactagggcgttaca 3000  T

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Target: scaffold0610 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 6878 - 6911
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||||||| |||||||||||||||||    
T  6878 aaaataaataaaataatgactagggcgttacagt 6911  T

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Target: scaffold0261 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 8141 - 8112
Alignment:
Q  24 aataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||    
T  8141 aataaataaaataacgactagggcgttaca 8112  T

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Target: scaffold0193 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 1751 - 1722
Alignment:
Q  24 aataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||||||||||||||||||||    
T  1751 aataaataaaataacgactagggcgttaca 1722  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 44945 - 44905
Alignment:
Q  14 ataattctaaaataaataaaataacgactagggcgttacagt 55  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  44945 ataattctaaaataaataaaat-actactagggcgttacagt 44905  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 40217 - 40185
Alignment:
Q  21 taaaataaataaaataacgactagggcgttaca 53  Q
    ||||||||||||| |||||||||||||||||||    
T  40217 taaaataaataaattaacgactagggcgttaca 40185  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 45611 - 45579
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||| ||||||    
T  45611 aaaataaataaaataacgactagggcattacag 45579  T

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Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 49884 - 49852
Alignment:
Q  22 aaaataaataaaataacgactagggcgttacag 54  Q
    |||||||||||||||||||||||||| ||||||    
T  49884 aaaataaataaaataacgactagggcattacag 49852  T

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