View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14016_low_8 (Length: 318)
Name: NF14016_low_8
Description: NF14016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14016_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 11067379 - 11067099
Alignment:
| Q |
13 |
atactacaattaatgtggcaccatactggccgtagagggtccaaacacacagttgctcccctctttccatgttgattgcataatgtttgtctctcttttg |
112 |
Q |
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| T |
11067379 |
atactacaattaatgtggcaccatactggccgtagagggtccaaacacacagtggctcccctctttccatgttgattgcataatgtttgtctctcttttg |
11067280 |
T |
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| Q |
113 |
atattatgcaaaagacaaatctttgtatgtatagttaaaaatgcatgtgacatagcannnnnnnnctttacatttggcatttgggttacgaactaaaaac |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
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| T |
11067279 |
atattatgcaaaagacaaatctttgtatgtatagttaaaaatgcatgtgacatagca---tttttctttacatttggca-ttgggttacgaactaaaaac |
11067184 |
T |
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| Q |
213 |
atgtgtatgtgtgcactataaggttaagaaaatcctctcgnnnnnnngtagggttcagaaaatgacatttgaaatagttcggtgatcatat |
303 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11067183 |
------atgtgtgcactataaggttaagaaaatcctctcgaaaaaaagtagggttcagaaaatgacatttgaaatagttcggtgatcatat |
11067099 |
T |
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