View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14017_high_6 (Length: 202)

Name: NF14017_high_6
Description: NF14017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14017_high_6
NF14017_high_6
[»] chr8 (23 HSPs)
chr8 (8-185)||(36934512-36934685)
chr8 (3-78)||(24362241-24362316)
chr8 (5-78)||(22651921-22651994)
chr8 (106-173)||(36921508-36921575)
chr8 (5-67)||(4673466-4673528)
chr8 (1-78)||(926825-926902)
chr8 (5-78)||(2572097-2572170)
chr8 (27-68)||(3454474-3454515)
chr8 (5-78)||(29510345-29510418)
chr8 (107-176)||(36928971-36929040)
chr8 (27-78)||(16642029-16642080)
chr8 (5-78)||(27101460-27101533)
chr8 (5-65)||(24196638-24196698)
chr8 (1-37)||(34897071-34897107)
chr8 (1-40)||(20679432-20679471)
chr8 (4-47)||(24669409-24669452)
chr8 (5-55)||(22197783-22197833)
chr8 (5-55)||(24727795-24727845)
chr8 (1-43)||(31109555-31109597)
chr8 (1-46)||(29776013-29776058)
chr8 (1-78)||(44067461-44067538)
chr8 (1-37)||(39954316-39954352)
chr8 (7-47)||(41838166-41838206)
[»] scaffold0053 (1 HSPs)
scaffold0053 (5-78)||(8743-8816)
[»] chr3 (29 HSPs)
chr3 (7-78)||(16000059-16000130)
chr3 (1-78)||(34307817-34307894)
chr3 (5-64)||(25064868-25064927)
chr3 (5-78)||(3164066-3164139)
chr3 (1-66)||(4991004-4991069)
chr3 (5-78)||(10335327-10335400)
chr3 (5-78)||(11665889-11665962)
chr3 (1-78)||(24205078-24205155)
chr3 (1-64)||(8383216-8383279)
chr3 (5-78)||(750659-750733)
chr3 (1-47)||(5441068-5441114)
chr3 (5-55)||(14829658-14829708)
chr3 (5-78)||(15796335-15796408)
chr3 (1-36)||(6525717-6525752)
chr3 (19-78)||(10219644-10219703)
chr3 (5-56)||(10504944-10504995)
chr3 (1-47)||(9800016-9800062)
chr3 (1-75)||(11658764-11658837)
chr3 (1-47)||(14223890-14223936)
chr3 (5-78)||(14747512-14747579)
chr3 (5-78)||(21479069-21479136)
chr3 (5-55)||(41961691-41961741)
chr3 (1-58)||(12674538-12674595)
chr3 (2-43)||(21720744-21720785)
chr3 (5-78)||(35994778-35994851)
chr3 (7-47)||(14216868-14216908)
chr3 (7-47)||(14222997-14223037)
chr3 (5-37)||(15544679-15544711)
chr3 (5-37)||(23870600-23870632)
[»] chr7 (34 HSPs)
chr7 (1-78)||(1433399-1433476)
chr7 (5-74)||(26733253-26733322)
chr7 (1-64)||(7328728-7328791)
chr7 (1-64)||(27945000-27945063)
chr7 (1-47)||(5235962-5236008)
chr7 (1-77)||(21141019-21141095)
chr7 (1-78)||(26329419-26329496)
chr7 (1-61)||(2425770-2425830)
chr7 (1-52)||(11722135-11722186)
chr7 (1-44)||(22484004-22484047)
chr7 (5-68)||(24339597-24339660)
chr7 (1-60)||(48246850-48246909)
chr7 (1-43)||(25791633-25791675)
chr7 (1-78)||(22602747-22602824)
chr7 (1-78)||(30730982-30731059)
chr7 (5-77)||(11061117-11061189)
chr7 (1-37)||(32308106-32308142)
chr7 (27-78)||(9778453-9778504)
chr7 (27-78)||(29763237-29763288)
chr7 (1-43)||(598188-598230)
chr7 (5-47)||(4793839-4793881)
chr7 (1-47)||(19206026-19206072)
chr7 (1-43)||(20549771-20549813)
chr7 (1-43)||(21139030-21139072)
chr7 (5-47)||(24105654-24105696)
chr7 (1-55)||(43249961-43250015)
chr7 (1-47)||(49107797-49107843)
chr7 (2-47)||(2034417-2034462)
chr7 (1-58)||(4017831-4017888)
chr7 (5-78)||(5409877-5409950)
chr7 (1-38)||(6630949-6630986)
chr7 (1-78)||(17851376-17851453)
chr7 (1-37)||(23191882-23191918)
chr7 (5-37)||(42720931-42720963)
[»] chr6 (43 HSPs)
chr6 (1-78)||(13851681-13851758)
chr6 (5-78)||(16766642-16766715)
chr6 (3-78)||(9027123-9027198)
chr6 (5-78)||(1681703-1681776)
chr6 (5-78)||(7938061-7938134)
chr6 (1-78)||(8805609-8805686)
chr6 (1-64)||(9658839-9658901)
chr6 (1-75)||(5732547-5732621)
chr6 (5-78)||(426555-426628)
chr6 (5-62)||(3398580-3398637)
chr6 (1-78)||(7086740-7086817)
chr6 (5-78)||(8777014-8777087)
chr6 (5-78)||(9107411-9107484)
chr6 (1-82)||(21395344-21395425)
chr6 (5-54)||(1532207-1532258)
chr6 (1-64)||(6389702-6389765)
chr6 (3-78)||(10294052-10294127)
chr6 (1-64)||(25038108-25038171)
chr6 (1-55)||(5000663-5000717)
chr6 (1-47)||(7625098-7625144)
chr6 (1-78)||(20371147-20371219)
chr6 (5-64)||(8365560-8365619)
chr6 (5-64)||(12696284-12696342)
chr6 (7-78)||(24115890-24115961)
chr6 (4-61)||(6665177-6665232)
chr6 (5-47)||(16833284-16833326)
chr6 (8-58)||(19343379-19343429)
chr6 (7-65)||(33340428-33340486)
chr6 (1-42)||(677818-677859)
chr6 (1-58)||(9629348-9629405)
chr6 (1-82)||(10339163-10339244)
chr6 (2-47)||(18803549-18803594)
chr6 (1-34)||(19040341-19040374)
chr6 (2-55)||(19044432-19044485)
chr6 (1-42)||(25096404-25096445)
chr6 (1-37)||(7265630-7265666)
chr6 (1-37)||(7723287-7723323)
chr6 (1-61)||(7996415-7996475)
chr6 (1-61)||(8022326-8022386)
chr6 (1-37)||(10760878-10760914)
chr6 (11-55)||(11352327-11352371)
chr6 (1-65)||(30866181-30866245)
chr6 (6-78)||(34290119-34290191)
[»] chr4 (18 HSPs)
chr4 (5-78)||(20633430-20633503)
chr4 (1-78)||(36635269-36635346)
chr4 (5-78)||(19482613-19482686)
chr4 (1-76)||(847898-847973)
chr4 (5-78)||(23293027-23293100)
chr4 (125-176)||(29342774-29342825)
chr4 (5-77)||(14126152-14126224)
chr4 (1-37)||(17345452-17345488)
chr4 (5-61)||(28084483-28084539)
chr4 (1-37)||(35723422-35723458)
chr4 (27-78)||(4157103-4157154)
chr4 (27-78)||(28470342-28470393)
chr4 (1-47)||(5832731-5832777)
chr4 (5-55)||(21945471-21945521)
chr4 (1-78)||(24343452-24343529)
chr4 (5-66)||(40179677-40179738)
chr4 (5-37)||(5096137-5096169)
chr4 (7-47)||(11651177-11651217)
[»] chr1 (31 HSPs)
chr1 (5-78)||(398806-398879)
chr1 (5-79)||(31694753-31694825)
chr1 (1-78)||(3490427-3490498)
chr1 (1-78)||(609495-609572)
chr1 (1-58)||(20157387-20157444)
chr1 (1-78)||(41877507-41877584)
chr1 (1-64)||(10572626-10572689)
chr1 (5-68)||(48040503-48040566)
chr1 (1-47)||(2896158-2896204)
chr1 (5-78)||(16927226-16927297)
chr1 (1-43)||(36878441-36878483)
chr1 (5-78)||(1486750-1486823)
chr1 (1-62)||(19562658-19562718)
chr1 (5-78)||(38078702-38078770)
chr1 (1-78)||(38503265-38503342)
chr1 (13-78)||(41597519-41597584)
chr1 (1-37)||(17831568-17831604)
chr1 (5-64)||(5927381-5927440)
chr1 (19-78)||(47989443-47989502)
chr1 (1-47)||(5376537-5376583)
chr1 (5-47)||(5944257-5944299)
chr1 (1-47)||(6427326-6427372)
chr1 (1-55)||(7918248-7918302)
chr1 (1-47)||(9709796-9709842)
chr1 (5-55)||(13011257-13011307)
chr1 (5-47)||(14359562-14359604)
chr1 (1-35)||(21057771-21057805)
chr1 (5-55)||(40917719-40917769)
chr1 (5-54)||(17754280-17754329)
chr1 (5-78)||(42359490-42359563)
chr1 (7-55)||(38743038-38743086)
[»] chr2 (26 HSPs)
chr2 (1-77)||(21616708-21616784)
chr2 (7-63)||(21624226-21624282)
chr2 (5-67)||(11670711-11670773)
chr2 (1-78)||(18276466-18276543)
chr2 (5-64)||(20539715-20539774)
chr2 (1-60)||(21782855-21782914)
chr2 (1-68)||(4142877-4142944)
chr2 (1-64)||(23717986-23718048)
chr2 (1-64)||(24105658-24105720)
chr2 (22-60)||(15349803-15349841)
chr2 (2-43)||(6736470-6736511)
chr2 (5-45)||(36756385-36756425)
chr2 (27-78)||(40361817-40361868)
chr2 (1-55)||(10535796-10535850)
chr2 (7-45)||(10547973-10548011)
chr2 (1-55)||(18420471-18420525)
chr2 (5-47)||(29663985-29664027)
chr2 (1-67)||(31727813-31727879)
chr2 (1-43)||(37411281-37411323)
chr2 (5-43)||(39323244-39323282)
chr2 (7-64)||(6940214-6940271)
chr2 (33-78)||(26769462-26769507)
chr2 (5-78)||(28412295-28412368)
chr2 (1-78)||(31283993-31284070)
chr2 (5-61)||(19536439-19536495)
chr2 (1-37)||(29970586-29970622)
[»] chr5 (30 HSPs)
chr5 (1-64)||(19820431-19820494)
chr5 (1-78)||(6326334-6326411)
chr5 (5-78)||(15382422-15382495)
chr5 (5-78)||(36642803-36642875)
chr5 (7-78)||(21522695-21522766)
chr5 (7-78)||(21533261-21533332)
chr5 (6-64)||(22013373-22013431)
chr5 (1-78)||(6770488-6770565)
chr5 (5-74)||(13287440-13287509)
chr5 (4-43)||(27144443-27144482)
chr5 (7-54)||(42488096-42488143)
chr5 (1-43)||(6035463-6035505)
chr5 (1-47)||(15410485-15410531)
chr5 (1-67)||(16203832-16203898)
chr5 (1-78)||(19579646-19579723)
chr5 (5-66)||(21191097-21191158)
chr5 (8-77)||(41995417-41995486)
chr5 (5-53)||(19552584-19552632)
chr5 (19-78)||(26799115-26799174)
chr5 (1-40)||(39205863-39205902)
chr5 (1-64)||(42469180-42469243)
chr5 (1-43)||(7175056-7175098)
chr5 (5-78)||(17177064-17177137)
chr5 (1-78)||(26205797-26205874)
chr5 (1-34)||(38816732-38816765)
chr5 (1-37)||(3966489-3966525)
chr5 (1-45)||(5873550-5873594)
chr5 (2-38)||(9878070-9878106)
chr5 (1-37)||(11685925-11685961)
chr5 (1-37)||(17123034-17123070)
[»] scaffold0652 (1 HSPs)
scaffold0652 (5-77)||(503-575)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-43)||(26373-26415)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-55)||(225305-225359)
[»] scaffold0027 (1 HSPs)
scaffold0027 (5-78)||(46627-46700)
[»] scaffold0021 (1 HSPs)
scaffold0021 (5-78)||(130427-130500)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-62)||(135349-135410)
[»] scaffold0003 (1 HSPs)
scaffold0003 (6-55)||(241562-241611)
[»] scaffold0223 (1 HSPs)
scaffold0223 (5-61)||(20134-20190)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-37)||(92793-92829)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-64)||(13359-13422)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-64)||(21905-21968)
[»] scaffold0018 (2 HSPs)
scaffold0018 (5-64)||(178860-178919)
scaffold0018 (1-47)||(192286-192332)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-67)||(263409-263475)
[»] scaffold1528 (1 HSPs)
scaffold1528 (5-54)||(1004-1053)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-77)||(3262-3338)
[»] scaffold0122 (1 HSPs)
scaffold0122 (7-55)||(8634-8682)


Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 36934685 - 36934512
Alignment:
Q  8 aattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcatactttagtaacatgtgtgtgtaggtactga 107  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||    
T  36934685 aattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatgcttcatactttagtaacatgtgt----aggtactga 36934590  T
Q  108 tggtgtagttggaactgtactccccaacactgaaaaagaagttgttttgaaacttaagcaaggagacatcatacctgt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36934589 tggtgtagttggaactgtactccccaacactgaaaaagaagttgttttgaaacttaagcaaggagacatcatacctgt 36934512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 24362241 - 24362316
Alignment:
Q  3 tctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||  |||||||||    
T  24362241 tctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcata 24362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22651994 - 22651921
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| |||||||||||| ||||||||| ||||||| || ||||||||| | |||||||    
T  22651994 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcata 22651921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 36921508 - 36921575
Alignment:
Q  106 gatggtgtagttggaactgtactccccaacactgaaaaagaagttgttttgaaacttaagcaaggaga 173  Q
    ||||| ||||||||||  || ||||||||||||| |||||||||||||||||| |||||| |||||||    
T  36921508 gatggcgtagttggaatggttctccccaacactggaaaagaagttgttttgaagcttaagaaaggaga 36921575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 4673466 - 4673528
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 67  Q
    ||||||||||| | |||||| |||||||||||||||||||||| || |||| |||||||||||    
T  4673466 tcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgtatc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 926825 - 926902
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||  |||| | |||||||||||| ||||||||| ||||||| || | ||||||| |||||||||    
T  926825 tttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 2572097 - 2572170
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  ||||||||||||| || || ||||||||| | ||||| || |||||||||||||||||||    
T  2572097 tcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccgtatccatgcttcata 2572170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 3454515 - 3454474
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 68  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  3454515 gtgtcagtgtctctgtcgtgttcggtgtctgtatccgtatcc 3454474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 29510345 - 29510418
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| |||||||||||| ||||||||| |||||||  | || |||||| |||||||||    
T  29510345 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcata 29510418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 36928971 - 36929040
Alignment:
Q  107 atggtgtagttggaactgtactccccaacactgaaaaagaagttgttttgaaacttaagcaaggagacat 176  Q
    |||||||||||||||   ||||||||| ||| | ||||||||| |||||||| |||||||||||||||||    
T  36928971 atggtgtagttggaatgatactccccagcaccggaaaagaagtagttttgaagcttaagcaaggagacat 36929040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 16642029 - 16642080
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| |||||||||    
T  16642029 gtgtcagtgtctgtgtcgtgtccggcgtccgtatccgtatccgtgcttcata 16642080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 27101533 - 27101460
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||| ||||||| ||||  | |||| |||| |||| || || ||||||||||||||||    
T  27101533 tcaaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtgtctgtatccatgcttcata 27101460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 24196638 - 24196698
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 65  Q
    ||||||||||||  |||||| |||||| ||||| || |||| |||||||||||||||||||    
T  24196638 tcaaattattagttgtgtcggcgtgtcggtgtccgtatcgtattcggtgtctgtatccgta 24196698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34897107 - 34897071
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34897107 tttctcaaattattagcggtgtcgacgtgtctgtgtc 34897071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20679432 - 20679471
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgt 40  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  20679432 tttctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 24669452 - 24669409
Alignment:
Q  4 ctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||| |||||||  ||||||||||||||||||||||    
T  24669452 ctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgt 24669409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 22197783 - 22197833
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||| |||| | ||||| |||||||||||||||| |||||||    
T  22197783 tcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtc 22197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 24727795 - 24727845
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||  |||| ||||||||||||| |||||||||||| |||||    
T  24727795 tcaaattattagttgtgttgacgtgtcagtgtatgtgtcgtgttcagtgtc 24727845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31109555 - 31109597
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    ||||||||||||||| |||||||| |||||||||||| |||||    
T  31109555 tttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29776058 - 29776013
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtg 46  Q
    ||||||||||||||||| |||||||| ||||| |||| ||||||||    
T  29776058 tttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44067538 - 44067461
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||| | |||||| |||||||||||| |||| ||||  |||||| || || || ||| |||||||||    
T  44067538 tttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccgtgcttcata 44067461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39954316 - 39954352
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| |||||| |||||    
T  39954316 tttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 41838166 - 41838206
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||| ||||||||||||||||||| || ||||||    
T  41838166 aaattattagctgtgtcgacgtgtcagtgtccgtatcgtgt 41838206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8816 - 8743
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| |||||||||||| ||||||||| ||||||| || |||||||||||||||||||    
T  8816 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcata 8743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 16000059 - 16000130
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  16000059 aaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34307817 - 34307894
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||||  |||||  ||||||||||| ||| ||||||  || |||||||||||||||||||    
T  34307817 tttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatccatgcttcata 34307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 25064927 - 25064868
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    |||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||    
T  25064927 tcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgtacccgt 25064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3164066 - 3164139
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| ||||||||||| || |||| ||||||||| ||||||| || || |||||| |||||||||    
T  3164066 tcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcata 3164139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4991004 - 4991069
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 66  Q
    ||||||||| ||||||||||||||  |||||||| || ||||||||||||||||| || |||||||    
T  4991004 tttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgtccgtat 4991069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 10335327 - 10335400
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  |||||| |||||||||||| ||||||||| ||||||| || | ||||||| |||||||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 10335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11665962 - 11665889
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||| |||||  |||| ||||| |||||||||| |||||||||||||| ||| | |||||||||    
T  11665962 tcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtctgtatccatattcgtgcttcata 11665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24205078 - 24205155
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||| | |||||| |||||||||||| ||||||||| ||||||| || || || ||| |||||||||    
T  24205078 tttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcata 24205155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8383279 - 8383216
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||| | ||||| || |||||    
T  8383279 tttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgt 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 750659 - 750733
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtc-agtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  |||||| |||||| |||||| ||||||||| ||||||| || ||||||||| |||||||||    
T  750659 tcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5441068 - 5441114
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||    
T  5441068 tttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgt 5441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 14829708 - 14829658
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||| |||||| |||||||||||||||||| ||| |||||||    
T  14829708 tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 14829658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 15796335 - 15796408
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| | |||||| ||||||| |||| ||||||||| ||||||| || ||| ||||| |||||||||    
T  15796335 tcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcata 15796408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6525717 - 6525752
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgt 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  6525717 tttctcaaattattagcggtgtcgacatgtcagtgt 6525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 10219703 - 10219644
Alignment:
Q  19 gtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||| ||||| ||||||||||||| | ||||||| ||||||||| || ||||||    
T  10219703 gtgtcgacgtatcagtatctgtgtcgtgtttgatgtctgtgtccgtatccttgattcata 10219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 10504944 - 10504995
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtct 56  Q
    ||||||||||| |||||| |||||||||||| || |||||||| ||||||||    
T  10504944 tcaaattattatcggtgttgacgtgtcagtgcctatgtcgtgtccggtgtct 10504995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9800062 - 9800016
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||||||| ||||||| |||||||||||  |||||||||    
T  9800062 tttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgt 9800016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11658837 - 11658764
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttc 75  Q
    ||||||||||||||| || ||| |  |||||||||||||||||||| || |||||||| | ||||||| ||||||    
T  11658837 tttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtg-tccgtgtctgtgttcgtatccgtgcttc 11658764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14223890 - 14223936
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||||| | |||||| |||||| |||||||||||||||    
T  14223890 tttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgt 14223936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 14747579 - 14747512
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||||||||||      |||| ||||||| |||||||||||| |||||||||    
T  14747579 tcaaattattagctgtgtcggcgtgtcagtgtc------gtgtccggtgtccgtatccgtatccgtgcttcata 14747512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21479136 - 21479069
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||||||||||      |||| ||||||| || |||||||||||||||||||    
T  21479136 tcaaattattagctgtgtcggcgtgtcagtgtc------gtgtccggtgtccgtgtccgtatccatgcttcata 21479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 41961691 - 41961741
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||  ||| || |||||||||||||||||||||| |||||||    
T  41961691 tcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtc 41961741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12674538 - 12674595
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 58  Q
    ||||||||||||||||| ||||||  |||||| |||| |||||||||  |||||||||    
T  12674538 tttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtctggtgtctgt 12674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 21720785 - 21720744
Alignment:
Q  2 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||| |||||||| |||||||||||| |||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 35994778 - 35994851
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| | ||||| ||||  |||||||| |||||||  | ||||||||| |||||||||    
T  35994778 tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcata 35994851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14216908 - 14216868
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||  ||||||||||||||||||| |||||||||    
T  14216908 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt 14216868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14223037 - 14222997
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||  ||||||||||||||||||| |||||||||    
T  14223037 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt 14222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 15544711 - 15544679
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||||||| |||||||||||||    
T  15544711 tcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 23870600 - 23870632
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||||||||||||||| |||||    
T  23870600 tcaaattattagcggtgtcgacgtgtccgtgtc 23870632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1433476 - 1433399
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||| ||  |||||||| |||||||||    
T  1433476 tttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcata 1433399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 26733322 - 26733253
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgctt 74  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||| ||| |||||    
T  26733322 tcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggtatccgtttccgtgctt 26733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7328728 - 7328791
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||||| || ||||||||| | |||||||||||||||||||||| ||||||||    
T  7328728 tttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgt 7328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27945063 - 27945000
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    |||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||| ||||||||    
T  27945063 tttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 27945000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5236008 - 5235962
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  5236008 tttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 5235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 21141019 - 21141095
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    ||||| |||||||||| |||||||||||||| | ||| ||||||||| ||||||| || ||||||||| ||||||||    
T  21141019 tttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26329419 - 26329496
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||| | ||||| || || |||| | |||||||||    
T  26329419 tttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctgtattcgtgcttcata 26329496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2425770 - 2425830
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||||||||||| ||||| || ||||||||| |||||||||||| | |||||||||||    
T  2425770 tttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtctgtatc 2425830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11722135 - 11722186
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggt 52  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||| ||||    
T  11722135 tttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggt 11722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22484047 - 22484004
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 44  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  22484047 tttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 24339660 - 24339597
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 68  Q
    ||||||||||||| |||||| ||||||| ||||  |||||||| ||||||| ||||||||||||    
T  24339660 tcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccgtatcc 24339597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48246850 - 48246909
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 60  Q
    |||||||||||| || | |||||||||||||| |||||||||||||||| ||||| ||||    
T  48246850 tttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcgtgttctgtgtccgtat 48246909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25791675 - 25791633
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtc 25791633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22602747 - 22602824
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||| |||  |||||||| |||||||||| |||||||||||| |||| | || ||||||||| | |||||||    
T  22602747 tttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtgtccgtatccgtccttcata 22602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30731059 - 30730982
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||| ||||||||| |||| || ||| ||||||||||  |||||| || ||||||||  |||||||||    
T  30731059 tttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcata 30730982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 11061117 - 11061189
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    ||||||||||||| ||||||  ||||||||||| ||||||| | || |||| || ||||||||| ||||||||    
T  11061117 tcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32308142 - 32308106
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32308142 tttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 9778504 - 9778453
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| ||||||||| ||||||| || ||||||||| |||||||||    
T  9778504 gtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 9778453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 29763237 - 29763288
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||| ||||||||||||||||||| | ||||||| | |||||||    
T  29763237 gtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgtacttcata 29763288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 598230 - 598188
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||    
T  598230 tttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtc 598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 4793881 - 4793839
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||| |||||||| || ||||||||||||||||||||||||||    
T  4793881 tcaagttattagctgtatcgacgtgtcagtgtctgtgtcgtgt 4793839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19206072 - 19206026
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||||||||||||||| |||||  ||||| |||||||||    
T  19206072 tttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgt 19206026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20549813 - 20549771
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    ||||||||||||||||||||||||  |||||||||| ||||||    
T  20549813 tttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21139030 - 21139072
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  21139030 tttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 24105696 - 24105654
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||| |||||| |||||||||||| |||||||||    
T  24105696 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 24105654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43250015 - 43249961
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||||| | |||||| |||||||||||| ||||| ||| |||||||    
T  43250015 tttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtc 43249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49107843 - 49107797
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||||    
T  49107843 tttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgt 49107797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 2034462 - 2034417
Alignment:
Q  2 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||||| ||||||||||||| ||| || |||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgt 2034417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4017831 - 4017888
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 58  Q
    ||||||||||||||| | |||||| |||||| ||||| ||||||||| | ||||||||    
T  4017831 tttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagtgtctgt 4017888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 5409877 - 5409950
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| || ||  ||||||||||||  |||||| | |||||||||| || |||||| |||||||||    
T  5409877 tcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccgtgcttcata 5409950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6630949 - 6630986
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtct 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6630949 tttctcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17851453 - 17851376
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||| |||||||||||||| |||| ||||| || ||  |||||||| ||||||| || || |||||| |||||||||    
T  17851453 tttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgtatccgtgcttcata 17851376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23191918 - 23191882
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  23191918 tttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 42720931 - 42720963
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||||||| |||||||||||||    
T  42720931 tcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13851758 - 13851681
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  |||| || |||| | || |||||||||    
T  13851758 tttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccgaacccgtgcttcata 13851681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 16766715 - 16766642
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||||||||||  |||||||| ||||||| || |||||||||||||||||||    
T  16766715 tcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 9027198 - 9027123
Alignment:
Q  3 tctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||| ||| || ||||||||  |||||||||    
T  9027198 tctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcata 9027123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 1681776 - 1681703
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  |||||| ||||| ||||| ||||||||||||||||||||| || |||||| |||||||||    
T  1681776 tcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgtgcttcata 1681703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 7938134 - 7938061
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||||||||||  |||||||| ||||||| || ||||||||| |||||||||    
T  7938134 tcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 7938061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8805609 - 8805686
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||||||  ||||| ||| |  ||||||||||||||||    
T  8805609 tttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttcata 8805686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9658901 - 9658839
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||| || ||||||||||||||    
T  9658901 tttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtg-tctgtgtctgtatccgt 9658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5732547 - 5732621
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttc 75  Q
    ||||||||||||||| |||||||| ||||||||||||  |||||||| | ||||| || || |||||||||||||    
T  5732547 tttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgtatccatgcttc 5732621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 426555 - 426628
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| | |||||| |||||||||||| ||||||||| |||| || || || ||||||||||||||||    
T  426555 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcata 426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 3398637 - 3398580
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatcc 62  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||| |||| ||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatcc 3398580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7086817 - 7086740
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||||||  ||| | ||| |  ||||||||||||||||    
T  7086817 tttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtatttgtgtttgtatccatgcttcata 7086740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 8777014 - 8777087
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  |||||| |||||||||||| ||||||||| || |||| || ||||||||| |||||||||    
T  8777014 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcata 8777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 9107411 - 9107484
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||| |||||| ||||||||| ||||||| || || |||||| |||||||||    
T  9107411 tcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcata 9107484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21395344 - 21395425
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcatacttt 82  Q
    |||||||||||||||||||||| | |||||| |||||  |||| | | |||||||||| || |||||| |||||||||||||    
T  21395344 tttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctgtatccgtgcttcatacttt 21395425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 1532258 - 1532207
Alignment:
Q  5 tcaaattattagcggtgt--cgacgtgtcagtgtctgtgtcgtgttcggtgt 54  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  1532258 tcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgt 1532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6389765 - 6389702
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||| | |||||| ||||| |||||| ||||||||| |||||||||| |||||    
T  6389765 tttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgt 6389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 10294127 - 10294052
Alignment:
Q  3 tctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||| ||| | ||||||| || ||||||||| ||||||  || ||||||||| |||||||||    
T  10294127 tctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 10294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25038108 - 25038171
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| |||  |||| ||||||||    
T  25038108 tttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgt 25038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5000663 - 5000717
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    |||||| ||||||||||||||||||||||||||| || ||||| ||| |||||||    
T  5000663 tttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtc 5000717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7625144 - 7625098
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||    
T  7625144 tttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgt 7625098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20371147 - 20371219
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||||| ||||||| ||||     ||||| |||| ||||| ||||||||| |||||||||    
T  20371147 tttctcaaattattagcggtgtcggcgtgtcaatgtc-----cgtgtccggtttctgtgtccgtatccgtgcttcata 20371219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 8365560 - 8365619
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||  |||||| |||||||||||| |||||||||  |||||| ||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgt 8365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 12696342 - 12696284
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||| |||||| |||||||||||| |||||||| || ||||| ||||||||    
T  12696342 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg-tccgtgtccgtatccgt 12696284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 24115890 - 24115961
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||  |||||  |||||||||| || ||||||||||||||||||| || |||||| | |||||||    
T  24115890 aaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtctgtatccgtacttcata 24115961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 6665232 - 6665177
Alignment:
Q  4 ctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||||||||||||| ||| ||| |  ||||| |||||||||||||||||||||||    
T  6665232 ctcaaattattagcggtttcggcgtat--gtgtccgtgtcgtgttcggtgtctgtatc 6665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 16833326 - 16833284
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||  |||||| ||||||||||||||||||||||    
T  16833326 tcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 19343429 - 19343379
Alignment:
Q  8 aattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 58  Q
    |||||||| ||||| |||| ||||| |||| ||||||||||||||||||||    
T  19343429 aattattaccggtgacgacatgtcaatgtcagtgtcgtgttcggtgtctgt 19343379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 33340428 - 33340486
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 65  Q
    ||||||| | |||||||| |||||| |||| ||||| |||| |||||||||||||||||    
T  33340428 aaattatcaacggtgtcggcgtgtctgtgtttgtgttgtgtccggtgtctgtatccgta 33340486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 677859 - 677818
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 42  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  677859 tttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9629405 - 9629348
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 58  Q
    |||||||||||||| ||||||||| ||||||| | || ||||||||| | ||||||||    
T  9629405 tttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgt 9629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10339163 - 10339244
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcatacttt 82  Q
    |||||||||||| | ||||||||| |||||||||||   |||||||| | |||||  | || |||||| |||||||||||||    
T  10339163 tttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcatacttt 10339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 18803549 - 18803594
Alignment:
Q  2 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||||    
T  18803549 ttctcgaattattagcggtgtcggcatgtcagtgtttgtgtcgtgt 18803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19040374 - 19040341
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  19040374 tttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 19044485 - 19044432
Alignment:
Q  2 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    |||||||||||||||  |||||| ||||||||||||  |||||| |||||||||    
T  19044485 ttctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgtattcggtgtc 19044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25096445 - 25096404
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 42  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  25096445 tttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgt 25096404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7265630 - 7265666
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  7265630 tttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7723287 - 7723323
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  7723287 tttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7996415 - 7996475
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||||||||||||| |||||| | ||||||||||  |||| ||| | |||||||||||    
T  7996415 tttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 7996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8022386 - 8022326
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||||||||||||| |||||| | ||||||||||  |||| ||| | |||||||||||    
T  8022386 tttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 8022326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10760878 - 10760914
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||| | |||||||||||||||||||    
T  10760878 tttctcaaattattatcagtgtcgacgtgtcagtgtc 10760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 11352371 - 11352327
Alignment:
Q  11 tattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    |||||||||||||||| ||| ||| ||||||||||||||| ||||    
T  11352371 tattagcggtgtcgacatgttagtatctgtgtcgtgttcgatgtc 11352327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30866181 - 30866245
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 65  Q
    |||||||||||||||||||||| |  ||||| ||||| ||||| ||| ||||||| |||| ||||    
T  30866181 tttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgta 30866245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 34290119 - 34290191
Alignment:
Q  6 caaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||  |||||| | ||||||||| |||||| | | |||||||||| ||||||||  |||||||||    
T  34290119 caaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccgtatctgtgcttcata 34290191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 20633503 - 20633430
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||||||||||||||||||| || ||||||  |||||| || ||||||||| |||||||||    
T  20633503 tcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcata 20633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36635346 - 36635269
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||| ||||| | |||||||||||| | ||||||| |||||||||| ||| |||||||||||||||    
T  36635346 tttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcata 36635269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19482686 - 19482613
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  |||||| ||||||||||||||||||||||  ||||||||| | ||||||| |||||||||    
T  19482686 tcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtgcttcata 19482613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 847973 - 847898
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttca 76  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||| ||| |||  | ||||||||| |||||||    
T  847973 tttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 23293027 - 23293100
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||| ||||||| || ||||||||  |||||||||    
T  23293027 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcata 23293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 29342774 - 29342825
Alignment:
Q  125 tactccccaacactgaaaaagaagttgttttgaaacttaagcaaggagacat 176  Q
    |||| |||||||||| ||||||||| |||||||| |||||||||||||||||    
T  29342774 tactacccaacactggaaaagaagtagttttgaagcttaagcaaggagacat 29342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 14126152 - 14126224
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    ||||||||||| | |||||| ||||| |||||||||||||||| |  ||||||| || ||||| |||||||||    
T  14126152 tcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtccactgtctgtgtctgtatctatgcttcat 14126224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17345452 - 17345488
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17345452 tttctcaaattattagcggtgtcggcgtgtcagtgtc 17345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 28084539 - 28084483
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||| ||||| |||||| |||||||| ||||||||||||| ||||||| |||||    
T  28084539 tcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatc 28084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35723422 - 35723458
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35723422 tttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 4157154 - 4157103
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||  |||||| || ||||||||| |||||||||    
T  4157154 gtgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcata 4157103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 28470393 - 28470342
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||| | | ||||||| |||||||||||| |||||||||    
T  28470393 gtgtcagtgtctgtgtcatatccggtgtccgtatccgtatccgtgcttcata 28470342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5832731 - 5832777
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||||||| |||||||||||| | ||| ||||||||||    
T  5832731 tttctcaaattattagcagtgtcgacgtgttaatgtttgtgtcgtgt 5832777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 21945521 - 21945471
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||| |||||| | |||||||||||||||| ||| |||||||    
T  21945521 tcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtc 21945471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24343529 - 24343452
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||| | |||||| |||||| | ||| ||||||||| ||||||| || || || ||| |||||||||    
T  24343529 tttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcata 24343452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 40179677 - 40179738
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 66  Q
    ||||| |||||  |||||| ||||||||||||| ||||| |||||||||||||  |||||||    
T  40179677 tcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctgagtccgtat 40179738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 5096137 - 5096169
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||||||| ||||    
T  5096137 tcaaattattagcggtgtcgacgtgtcaatgtc 5096169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 11651177 - 11651217
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||| ||||||||||||||||||| || ||||||    
T  11651177 aaattattagctgtgtcgacgtgtcagtgtccgtatcgtgt 11651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 398806 - 398879
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||| |  ||||||||| |||||||||    
T  398806 tcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 31694753 - 31694825
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcatac 79  Q
    |||||||||||||  ||||||||| |||||||||||  ||||| ||||||| |||||||||||| ||||||||||    
T  31694753 tcaaattattagctatgtcgacgtatcagtgtctgt--cgtgtccggtgtccgtatccgtatccgtgcttcatac 31694825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3490427 - 3490498
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||| |||||| ||||||||||||      |||| |||||||||||||||||||| |||||||||    
T  3490427 tttctcaaattattagcagtgtcggcgtgtcagtgtc------gtgtccggtgtctgtatccgtatccgtgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 609495 - 609572
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||| ||||||| |||||||||||   |||||||| || ||||||| ||||||| | |||||||||    
T  609495 tttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcata 609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20157387 - 20157444
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 58  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||| ||||||||||    
T  20157387 tttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtctgt 20157444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41877507 - 41877584
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||  ||| ||  | ||||||||| |||||||||    
T  41877507 tttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtccgtatccgtgcttcata 41877584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10572626 - 10572689
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    |||||||||||||||| ||||||| |||||||||||   |||||||| ||||||| ||||||||    
T  10572626 tttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgt 10572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 48040503 - 48040566
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 68  Q
    ||||||||||| | |||||| |||||||||||| ||||||||| ||||||| |||||| |||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatatcc 48040566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2896158 - 2896204
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  2896158 tttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgt 2896204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16927226 - 16927297
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||  || |||||||||||||||||||||||||| | ||||||| |  |||||| |||||||||    
T  16927226 tcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtttgatgtctgtgt--gtatccgtgcttcata 16927297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36878483 - 36878441
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  36878483 tttctcaaattattagcggtgtcggcgtgtcagtgtctatgtc 36878441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 1486750 - 1486823
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||  ||||||||| || ||||||| | |||| || || |||||||||||||||||||    
T  1486750 tcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgtatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19562658 - 19562718
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatcc 62  Q
    ||||||||||||||||| |||||| |||||||||||  |||| |||| ||||||||||||||    
T  19562658 tttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt-gtgtccggtgtctgtatcc 19562718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 38078702 - 38078770
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| ||||||||||||||||||     |||||| ||||||| || ||||||||| |||||||||    
T  38078702 tcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgtgtccgtatccgtgcttcata 38078770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38503342 - 38503265
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||||||||||  |||| |||||| ||||| ||| | ||||| || ||||||||| ||| |||||    
T  38503342 tttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccgtgcatcata 38503265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 41597519 - 41597584
Alignment:
Q  13 ttagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||| |||| | |||||| ||||| |||||||||| |||||| |||||||||||| |||||||||    
T  41597519 ttagctgtgttggcgtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcata 41597584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17831568 - 17831604
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17831568 tttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 5927381 - 5927440
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||| ||||   |||||||||||| ||||||||| ||||||| ||||||||    
T  5927381 tcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 5927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 47989502 - 47989443
Alignment:
Q  19 gtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||| ||||||||||||||||||||||  ||| || || || ||||||||||||||||    
T  47989502 gtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctgtatccatgcttcata 47989443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5376537 - 5376583
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||    
T  5376537 tttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgt 5376583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 5944299 - 5944257
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  5944299 tcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgt 5944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6427372 - 6427326
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||||||||||||| | |||||||||||| ||| |||||    
T  6427372 tttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgt 6427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7918248 - 7918302
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    |||||||||||||||| | ||||  ||||||| |||||||||||||| |||||||    
T  7918248 tttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtc 7918302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9709842 - 9709796
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||    
T  9709842 tttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgt 9709796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 13011257 - 13011307
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||| |||||| | |||||||||  |||||||||||||||||    
T  13011257 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtc 13011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 14359562 - 14359604
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||| |||||| |||||| |||||||||||||||    
T  14359562 tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgt 14359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21057805 - 21057771
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtg 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  21057805 tttctaaaattattagcggtgtcgacgtgtcagtg 21057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 40917769 - 40917719
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||| |||||| ||||||||| || ||||||||| |||||||    
T  40917769 tcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtc 40917719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 17754329 - 17754280
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 54  Q
    ||||||||||||||||||||  ||||||| ||||||||||| | ||||||    
T  17754329 tcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 17754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 42359490 - 42359563
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||  |||||  |||||||||||| |||| |||| ||||||  || ||||||||| |||||||||    
T  42359490 tcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcata 42359563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 38743038 - 38743086
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||| |||||||| ||||||||| | ||| ||||||||||||||||||    
T  38743038 aaattgttagcggtatcgacgtgttaatgtttgtgtcgtgttcggtgtc 38743086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21616784 - 21616708
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||   |||||||| ||||||||| ||||||||    
T  21616784 tttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 21624282 - 21624226
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccg 63  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccg 21624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 11670773 - 11670711
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 67  Q
    |||||||||||| || |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  11670773 tcaaattattagtggcgtcgacgtgtcagtgtctatgtcgtattcggtgtccgtatccgtatc 11670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18276543 - 18276466
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||||||||||||||| | | ||||||||||| |||||| ||||||| || || |||||| |||||||||    
T  18276543 tttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgcttcata 18276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 20539715 - 20539774
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  20539715 tcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgt 20539774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21782855 - 21782914
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 60  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||| | ||||||||||    
T  21782855 tttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtat 21782914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4142877 - 4142944
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 68  Q
    ||||| ||||| |||| ||||||| |||||||||||| | ||||||||||||||| ||||||| ||||    
T  4142877 tttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtatccgaatcc 4142944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23718048 - 23717986
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| || || ||||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatg-tccgtgtctgtatccgt 23717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24105720 - 24105658
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| || || ||||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatg-tccgtgtctgtatccgt 24105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 15349841 - 15349803
Alignment:
Q  22 tcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 60  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15349841 tcgacgtgtcattgtctgtgtcgtgttcggtgtctgtat 15349803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 6736511 - 6736470
Alignment:
Q  2 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  6736511 ttctcaaattattaccggtgtcgacgtgtcagtgtctttgtc 6736470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 36756385 - 36756425
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 45  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  36756385 tcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 40361817 - 40361868
Alignment:
Q  27 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||| || ||||||||||||||||| || || |||||||||||||||||||    
T  40361817 gtgtccgtatctgtgtcgtgttcggtatccgtgtccgtatccatgcttcata 40361868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10535796 - 10535850
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||||| |||||||| ||| | ||| |||||||||||| |||||||    
T  10535796 tttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgtacggtgtc 10535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 10547973 - 10548011
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 45  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  10547973 aaattattaacggtgtcgacgtgtcagtgtccgtgtcgt 10548011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18420471 - 18420525
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||||||| |||| | ||||||||| | ||| ||||||||||||||    
T  18420471 tttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcggtgtc 18420525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 29664027 - 29663985
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    |||||||||||||  ||||||| ||||||||||||||||||||    
T  29664027 tcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgt 29663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31727879 - 31727813
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 67  Q
    ||||||||||||||||  |||||  ||||||||| |||||||| |||||| ||||||| | ||||||    
T  31727879 tttctcaaattattagtagtgtcagcgtgtcagtatctgtgtcatgttcgatgtctgtgttcgtatc 31727813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37411281 - 37411323
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||||||||||||| | |||||| |||||||||    
T  37411281 tttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 39323282 - 39323244
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  39323282 tcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 6940271 - 6940214
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||| |||||| |||||||||||| ||||||| || | |||| ||||||||    
T  6940271 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtatttgatgtccgtatccgt 6940214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 26769507 - 26769462
Alignment:
Q  33 gtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||| ||||||| || ||||||||| |||||||||    
T  26769507 gtgtctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 26769462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 28412368 - 28412295
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| |||||| ||||||| |||||| |||||||||  |||||| || ||| ||| | |||||||||    
T  28412368 tcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcata 28412295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31284070 - 31283993
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||| |||||| ||||| |||||  ||||  ||| ||||||| || ||||||||  |||||||||    
T  31284070 tttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcata 31283993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 19536439 - 19536495
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||||||||  |||||| ||||||| |||| ||||||||| ||||||| |||||    
T  19536439 tcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 19536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29970586 - 29970622
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    ||||||||||||||||||||||| | |||||||||||    
T  29970586 tttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19820431 - 19820494
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||| ||||||||    
T  19820431 tttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 19820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6326334 - 6326411
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||||| ||||| ||||| |||||||||||| ||||||||| |||| || || ||| |||||||||||||||    
T  6326334 tttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcata 6326411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 15382495 - 15382422
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||| ||||||| || ||||||||| |||||||||    
T  15382495 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 15382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 36642803 - 36642875
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| | |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtct-tgtccgtatccatgcttcata 36642875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 21522766 - 21522695
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| |||||| |||||||||||| ||||||||| ||||| | || ||||||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcata 21522695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 21533332 - 21533261
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| |||||| |||||||||||| ||||||||| ||||| | || ||||||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcata 21533261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 22013431 - 22013373
Alignment:
Q  6 caaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    |||||||||||| |||||| |||||||||||| ||||||||| ||||||| ||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 22013373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6770565 - 6770488
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||| ||||||||||  |||||   ||||||||||| ||||| ||||||||||| |||||||||||| |||||||||    
T  6770565 tttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcata 6770488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 13287440 - 13287509
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgctt 74  Q
    ||||||||||| | |||||||||||| |||||| ||||||||| ||||||| || ||||||||| |||||    
T  13287440 tcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 27144482 - 27144443
Alignment:
Q  4 ctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  27144482 ctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 42488096 - 42488143
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 54  Q
    ||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  42488096 aaattatcaacggtgtcgacgtgtcagtgtctgtgtcgtgttcagtgt 42488143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6035505 - 6035463
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagtgtctttgtc 6035463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15410485 - 15410531
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||    
T  15410485 tttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 15410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16203832 - 16203898
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 67  Q
    ||||||||||||||||| |||||| | ||| |||||| ||||| |||||||||||||| || |||||    
T  16203832 tttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgtctgtatc 16203898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19579723 - 19579646
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||||||| |||||| ||| |||||||| |||| || | ||||||| || | ||||||| |||||||||    
T  19579723 tttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcata 19579646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 21191097 - 21191158
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 66  Q
    ||||||||||||| |||||| | |||||||||| ||||||||| ||||||| || |||||||    
T  21191097 tcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 41995486 - 41995417
Alignment:
Q  8 aattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    |||||||||  |||||| |||||||||||||||||||| | | ||||| || ||||||||| ||||||||    
T  41995486 aattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19552584 - 19552632
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtg 53  Q
    ||||||||||| | |||||| |||||||||||| |||||||||||||||    
T  19552584 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtg 19552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 26799174 - 26799115
Alignment:
Q  19 gtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    |||||||||| ||||| ||||||||||||| | ||||||| ||||||||| || ||||||    
T  26799174 gtgtcgacgtatcagtatctgtgtcgtgtttgatgtctgtgtccgtatccttgattcata 26799115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39205902 - 39205863
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgt 40  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  39205902 tttctcaaattattagcagtgtcgacgtgtccgtgtctgt 39205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42469243 - 42469180
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||| | |||||| ||||||| | || ||||||||||||||||| || |||||    
T  42469243 tttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgt 42469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7175056 - 7175098
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||    
T  7175056 tttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 17177064 - 17177137
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||||| |||| | ||| |||||||| | ||||| |  ||||||||| ||||||||| |||||||||    
T  17177064 tcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcata 17177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26205797 - 26205874
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||| | ||| |||| ||||||||||||||||  |||| ||| ||||||| || || || |||||||||||||    
T  26205797 tttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtgtctgtgtccatgcttcata 26205874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38816732 - 38816765
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  38816732 tttctcaaattattagcggtgtcggcgtgtcagt 38816765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3966525 - 3966489
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  3966525 tttctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5873550 - 5873594
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 45  Q
    |||||||||||||||| ||||||| | |||||||||| |||||||    
T  5873550 tttctcaaattattagaggtgtcggcatgtcagtgtccgtgtcgt 5873594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 9878070 - 9878106
Alignment:
Q  2 ttctcaaattattagcggtgtcgacgtgtcagtgtct 38  Q
    ||||||||||||||  |||||||||||||||||||||    
T  9878070 ttctcaaattattattggtgtcgacgtgtcagtgtct 9878106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11685961 - 11685925
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  11685961 tttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17123070 - 17123034
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  17123070 tttctcaaattattagcggtgttggcgtgtcagtgtc 17123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 503 - 575
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    ||||||||||||| |||||| ||| |||||||| ||| ||||||||||||| || ||||||||| ||||||||    
T  503 tcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26415 - 26373
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 43  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  26415 tttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 225305 - 225359
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||||||| | |||||| |||||||||||| ||||||||| |||||||    
T  225305 tttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 225359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 46700 - 46627
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||||||||| | |||||| ||||||| |||| ||||||||| || |||| || ||||||||| |||||||||    
T  46700 tcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcata 46627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 130500 - 130427
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 78  Q
    ||||| ||||| | |||||| | ||||| |||| ||||||||| ||||||| || |||||||||||||||||||    
T  130500 tcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcata 130427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 135349 - 135410
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatcc 62  Q
    ||||||||||||||||| ||||||  ||||  ||||||||||||| ||||||||| ||||||    
T  135349 tttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtatcc 135410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 241611 - 241562
Alignment:
Q  6 caaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    |||||||||||| |||||| |||||||||||| ||||||||| |||||||    
T  241611 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 241562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 20190 - 20134
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 61  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||| ||||||| |||||    
T  20190 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 20134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 92829 - 92793
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  92829 tttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13422 - 13359
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||||  |||||| |||||||||||| ||||| | | ||||||| ||||||||    
T  13422 tttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgt 13359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21905 - 21968
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||||||  |||||| |||||||||||| ||||| | | ||||||| ||||||||    
T  21905 tttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgt 21968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 178860 - 178919
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 64  Q
    ||||||||||||  |||||| |||||||||||| ||||||||| |||||||  |||||||    
T  178860 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgt 178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 192286 - 192332
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 47  Q
    ||||||||||||||| |||||||| |||||||||||| || ||||||    
T  192286 tttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgt 192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 263409 - 263475
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 67  Q
    ||||||||||||||||| |||| ||| |||||||||| ||||||| | | ||||| || ||||||||    
T  263409 tttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccgtatc 263475  T

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Target: scaffold1528 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 1053 - 1004
Alignment:
Q  5 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 54  Q
    ||||||||||||||||||||  ||||||| ||||||||||| | ||||||    
T  1053 tcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 1004  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3338 - 3262
Alignment:
Q  1 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 77  Q
    ||||| ||||| |||||  ||||||||||||||| || ||||||||| ||||||| || ||  ||||| ||||||||    
T  3338 tttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgtgtctatatccgtgcttcat 3262  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 8682 - 8634
Alignment:
Q  7 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 55  Q
    ||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  8682 aaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtc 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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