View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14018_high_13 (Length: 350)
Name: NF14018_high_13
Description: NF14018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14018_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 4761649 - 4761328
Alignment:
| Q |
1 |
aaatgtttcttgtacctcaatttaattttaataggactgaaaagaaccattgtgttatgaatgatgttgtcttgtcttgtggtaacgatttcaattgcgt |
100 |
Q |
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| T |
4761649 |
aaatgtttcttgtacctcaatttaattttaataggactgaaaagaaccattgtgttatgaatgatgttgtcttgtcttgtggtaacgatttcaattgcgt |
4761550 |
T |
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| Q |
101 |
gtatgaatatgtccttttcatagaacaattgggtataaacgcaaccttaattataatgtaattattaattattatggtttaccaacaaaccccgcctatt |
200 |
Q |
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| T |
4761549 |
gtatgaat--gtccttttcattgaacaattgggtataaacgcaaccttaattataatgtaattattaattattatggtttaccaataaaccctgcctatt |
4761452 |
T |
|
| Q |
201 |
gatattttctgttacgtaaatggtgagattaacatattgtaacaaacattaacaaaaattgttaacaaatctatgcatggtaagatataataagaaaaat |
300 |
Q |
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| T |
4761451 |
gatattttctgttacgtaaatggtgagattaacatattgtaacaaacattaacaaaaattgttaacaaatctatgcatggtaagatataataagaaaaat |
4761352 |
T |
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| Q |
301 |
ggttctggttccacttagtcatga |
324 |
Q |
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| T |
4761351 |
gattctggttccacttagtcatga |
4761328 |
T |
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