View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14018_high_14 (Length: 343)
Name: NF14018_high_14
Description: NF14018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14018_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 12 - 338
Target Start/End: Original strand, 29440918 - 29441244
Alignment:
| Q |
12 |
taatacttctgatgaatgaggagtcaatgccatacacttccttgcatctatatattgcaaatatggtggaagcactgaaatatctctaagatgcttgcag |
111 |
Q |
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| T |
29440918 |
taatacttctgatgaatgaggagtcaaagccatacacatccttgcatctatatattgcaaatatggtggaagcactgaaatatctctaagatgcttgcag |
29441017 |
T |
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| Q |
112 |
ttttctatgttaagaagcaagagatgagaaagatcttcaatgcaatcaggaatggtcaagaaattgttatctgataggatcaaccactttaattgtagaa |
211 |
Q |
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|||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29441018 |
ttttctatgttaagaagcaagagatgagaaaggtctttaatgcacacaggaatggtcaagaaattgttatctgataggatcaaccactttaattgtagaa |
29441117 |
T |
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| Q |
212 |
aacatctgagaattaactcaagatcttcatctgatagattgcaatttttgagacttagattacttaactttggaagccagtcagtagttctgttttccaa |
311 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29441118 |
aacatttgagaattaactcaagatcttcatctgatagattgcaatttttgagacttagattacttaactttggaagccagtcagtagttctgttttccaa |
29441217 |
T |
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| Q |
312 |
tgacttccatagaagttttggaagttg |
338 |
Q |
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||||||||||||||||||||||||||| |
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| T |
29441218 |
tgacttccatagaagttttggaagttg |
29441244 |
T |
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