View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14018_high_8 (Length: 411)
Name: NF14018_high_8
Description: NF14018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14018_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 8 - 384
Target Start/End: Original strand, 22575595 - 22575971
Alignment:
| Q |
8 |
cctcgtcttgcgtttcaagctattgtctttataccctttgtttattcatttaaatttcttttttatcaatgtgcactcaaatttttgtccaagaatcttt |
107 |
Q |
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| T |
22575595 |
cctcgtcttccgtttcaagctattgtctttataccctttgtttagtcatttaaatttcttttttatcaatgtgcactcaaatttttgtccaagaatcttt |
22575694 |
T |
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| Q |
108 |
cgtcaaagtcattcacatttctgatcatttcaaattcaacgagttatttgtttgtattttatgcttcatgaatagttctctccttcatatacatatcctt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22575695 |
cgtcaaagtcattcacatttctgatcatttcaaattcaacgagttatttgtttgtattttatgcttcatgaatagttctctccttcatatacatatcctt |
22575794 |
T |
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| Q |
208 |
gataagtttcattgaatagttaaacatttcaaatcttgtcatctttcaattgttttatgcatgatatttctatataaaatttaaaacttttgcaagcttt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22575795 |
gataagtttcattgaatagttaaacatttcaaatcttgtcatctttcaattgttttatgcatgatatttctatataaaatttaaaacttttgcaagcttt |
22575894 |
T |
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| Q |
308 |
acttgcatagtaaccacaatttgaccccatactcattattttaaaattatggtgaagtttgactacaaaaaatgaag |
384 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
22575895 |
acttgcatagtaaccacaatttgacaccatactcattattttaaaattatggtgaagcttgactacaaaaaatgaag |
22575971 |
T |
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