View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1401_high_27 (Length: 248)
Name: NF1401_high_27
Description: NF1401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1401_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 39892998 - 39892866
Alignment:
| Q |
1 |
agtgagttgttttcattgtttggaatattatcagaaggtttgttgaaagtttgttcttgttcggtattaggtttggagagatgagattgaagagtgacag |
100 |
Q |
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| T |
39892998 |
agtgagttgttttcattgtttggaatattatcagaaggtttgttgaaagtttgttcttgttcggtattaggtttggagagatgagattgaagagtgacag |
39892899 |
T |
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| Q |
101 |
ggttgtttatcttctgaggttgagggtgtgaat |
133 |
Q |
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|||||||| |||||||||||||||||||||||| |
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| T |
39892898 |
ggttgtttttcttctgaggttgagggtgtgaat |
39892866 |
T |
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