View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1401_low_3 (Length: 592)
Name: NF1401_low_3
Description: NF1401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1401_low_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 468; Significance: 0; HSPs: 56)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 80 - 563
Target Start/End: Original strand, 27505531 - 27506014
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctaca |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27505531 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagattaaatcttttgaatgtgagaaactaaactgctacaaaaatgggtcaaatatctaca |
27505630 |
T |
|
| Q |
180 |
tcagtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattgga |
279 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27505631 |
ttagtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattgga |
27505730 |
T |
|
| Q |
280 |
tggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctc |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27505731 |
tggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctc |
27505830 |
T |
|
| Q |
380 |
ctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatg |
479 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27505831 |
ctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatg |
27505930 |
T |
|
| Q |
480 |
tatgtgttgaaaataaagacttgtttgtaaatagaatgctcaagtttctgaatttcaaatgcttttggttgtgaatgattgtgt |
563 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27505931 |
tatgtgttgaaaataaagacttgtttgtaaatagaatgctcaagtttctgaatttcaaatgcttttggttgtgaatggttgtgt |
27506014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 80 - 492
Target Start/End: Complemental strand, 27480213 - 27479800
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaa-tgggtcaaatatctac |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
27480213 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagattaaatattttgaacgtgagaaactaaactactacaaaaaatggatcaaataactac |
27480114 |
T |
|
| Q |
179 |
atcagtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattgg |
278 |
Q |
| |
|
||||||| |||||||||||||| || |||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27480113 |
gtcagtcctatgatatcttcaaaaaggtaattcaattcaagtgagaattaatatctaagaaaatgtcttctctgcaaggaatggtgagaccacccattgg |
27480014 |
T |
|
| Q |
279 |
atggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctct |
378 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27480013 |
atgatcatattcaaattgttcctcagcttggttcaacaacttttggaatgatgtttggttcaagtatgatacaggaatcacaaaacgcttcattttctct |
27479914 |
T |
|
| Q |
379 |
cctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtat |
478 |
Q |
| |
|
|||||||| ||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27479913 |
cctacgtatactgctagatagccttttggcacgtccaaaccttttgaagatgatgcccttgatctgatgatacttggtaaacgaaaacccattgttgtat |
27479814 |
T |
|
| Q |
479 |
gtatgtgttgaaaa |
492 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27479813 |
gtatgtgttgaaaa |
27479800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 80 - 483
Target Start/End: Original strand, 27523231 - 27523635
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctaca |
179 |
Q |
| |
|
|||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
27523231 |
tgaggtgaacatatttacaagcaaatatgataacaacaaaagataaaatcttttgaaggtgagaaactaaactgctacaaaactgggtcaaatatctatg |
27523330 |
T |
|
| Q |
180 |
tca-gtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattgg |
278 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
27523331 |
tcatgtcctatgatatcttcaaagagctaattcaattcaagtgagaagtaatatctaagaaaatgtcttctttgcaaggaatagttagaccacccattgg |
27523430 |
T |
|
| Q |
279 |
atggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctct |
378 |
Q |
| |
|
|||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27523431 |
atggtcatattcaaattgttcctcggcttcgctcaacaattcttggaatgaagtttggttcaaatatgatacaggaatcacaaaccgcttcattttctct |
27523530 |
T |
|
| Q |
379 |
cctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtat |
478 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27523531 |
cctacgtacactgctagatagccctttggaacgtccacagcttttgaagatgatgcccttgatctgatgatactacgtaaacgaaaacccattgttgtat |
27523630 |
T |
|
| Q |
479 |
gtatg |
483 |
Q |
| |
|
||||| |
|
|
| T |
27523631 |
gtatg |
27523635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 80 - 559
Target Start/End: Complemental strand, 27487297 - 27486795
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaa-tgggtcaaatatctac |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||| ||||||| |||||||| |
|
|
| T |
27487297 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagattaaatcttttgaaggtgagaata-aaactgctacaaaaaatgggtcagatatctac |
27487199 |
T |
|
| Q |
179 |
atcagtccaatgatatcttcaaagagctaat---tcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccat |
275 |
Q |
| |
|
||||||| |||||||||||||||| ||||| |||||||||||||||| | |||||||||||||| |||||| ||||||||||||| ||||||||||| |
|
|
| T |
27487198 |
gtcagtcctatgatatcttcaaagaactaataattcaattcaagtgagaagtaatatctaagaaaatgtcttctttgcaaggaatagtaagaccacccat |
27487099 |
T |
|
| Q |
276 |
tggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttc |
375 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||| || || | |||||| |||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
27487098 |
tggatgatcatattcaaattgttcttcagcttggttcaacaattcttgaaacgatggttggtttaagtatgataaagggatcacaaaccgcttcattttc |
27486999 |
T |
|
| Q |
376 |
tctcctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttg |
475 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || |||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27486998 |
tctcctacgtacactgctagatatccctttggaacgtccacagcttttgaagatgatgcccttgatctgatgatacttggtaaacggaaacccattgttg |
27486899 |
T |
|
| Q |
476 |
tatgtatgtgttgaaaa--------------------taaagacttgtttgtaaatagaatgctcaagtttctgaatttcaaatgcttttggttgtgaat |
555 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
27486898 |
tatgtatgtgttgaaaagagaagcttgatctaaaaatgaaagacttgtttgtaaatagaaggctcaactttctgaatttcaaatgcttttggttgtgagt |
27486799 |
T |
|
| Q |
556 |
gatt |
559 |
Q |
| |
|
|||| |
|
|
| T |
27486798 |
gatt |
27486795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 80 - 492
Target Start/End: Original strand, 27525942 - 27526350
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctaca |
179 |
Q |
| |
|
|||| ||||| |||| | || ||||||| |||||||||||||||||| |||| | || ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27525942 |
tgaggtgaactttttcataaacaagtatcataacaacaaaagataaa-tcttctaaaggtgagaaactaaactgctacaaaaatgggtcaaatatctacg |
27526040 |
T |
|
| Q |
180 |
tcagtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattgga |
279 |
Q |
| |
|
||| || ||| ||||||| ||||| |||||||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27526041 |
tcaatcttatggtatcttccgagagccaattcaattcaaacgagaagtgatctctaagaaaacgtcttctctgcaaggaatagtgagaccacccgttgga |
27526140 |
T |
|
| Q |
280 |
tggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctc |
379 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27526141 |
tgatcatattcaaattgttcctcagcttggctcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctc |
27526240 |
T |
|
| Q |
380 |
ctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatg |
479 |
Q |
| |
|
| || |||||||||||||| |||||||| || || | ||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27526241 |
caacatacactgctagatatccctttggaacatcgacaccttttgaagatgatgccct---tttgatgatactaggtaaacgaaaacccattgttgtatg |
27526337 |
T |
|
| Q |
480 |
tatgtgttgaaaa |
492 |
Q |
| |
|
||||||||||||| |
|
|
| T |
27526338 |
tatgtgttgaaaa |
27526350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 112 - 492
Target Start/End: Complemental strand, 27469739 - 27469359
Alignment:
| Q |
112 |
acaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctacatcagtccaatgatatcttcaaagagctaattc |
211 |
Q |
| |
|
|||||||||| ||||||||||||| || ||||||||| | |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
27469739 |
acaacaaaagtgaaaatcttttgaaggtatgaaactaaagtgctacaaaaatgggtcagatatctacgtcagtcctatgatatcttcaaagagctaattc |
27469640 |
T |
|
| Q |
212 |
aattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggtt |
311 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| | |
|
|
| T |
27469639 |
aattgaagtgagaggtgatatctaagaaaatttcttctctgcaaggaatagttagaccacccattggatgttcatattcaaattgttcttcagcttggct |
27469540 |
T |
|
| Q |
312 |
caacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacc |
411 |
Q |
| |
|
||||| |||||| ||||| ||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
27469539 |
caacagttcttgtaatgatgtttgcttcaaatatgatatagggatcacaaaccgcttcattttctctcctacgtacactgctagatatccctttggaacg |
27469440 |
T |
|
| Q |
412 |
tccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatgtatgtgttgaaaa |
492 |
Q |
| |
|
|||| | |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27469439 |
tccacagcttttgaagatgatactcttgatctgatgagacttggtaaacgaaaacccattgttgtatgtatgtgtttaaaa |
27469359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 116 - 479
Target Start/End: Original strand, 27513641 - 27514004
Alignment:
| Q |
116 |
caaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctacatcagtccaatgatatcttcaaagagctaattcaatt |
215 |
Q |
| |
|
||||||| ||| |||||| || ||||||||||| |||||||||||| |||||||||||||||| ||| | | ||| || ||||||||| | |||||||| |
|
|
| T |
27513641 |
caaaagagaaactcttttcaaggtgagaaactatactactacaaaattgggtcaaatatctacgtcaatactatgctaacttcaaagatttgattcaatt |
27513740 |
T |
|
| Q |
216 |
caagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaac |
315 |
Q |
| |
|
|||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |
|
|
| T |
27513741 |
caagcgagaagtgatatctaagaatacttcttctctgcaaggaatagtgagaccacccattggatgatcatattcatattgttcttcagcttggttcaac |
27513840 |
T |
|
| Q |
316 |
aattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctcca |
415 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| || | |
|
|
| T |
27513841 |
aattcttggaacgaggtttggttcaagtatgatattgggatcacaaaccgcttcattttctctcctacatacactgctagatatccttttggcacgtcaa |
27513940 |
T |
|
| Q |
416 |
aaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatg |
479 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27513941 |
cagcttttgaagatgatacccttgatctgatgatacttggtaaacgaaaacccattgttgtatg |
27514004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 158 - 492
Target Start/End: Complemental strand, 27476920 - 27476589
Alignment:
| Q |
158 |
aaaaatgggtcaaatatctacatcagtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaagg |
257 |
Q |
| |
|
||||||| || |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| | ||||| |||||||| |||||||||||||| |
|
|
| T |
27476920 |
aaaaatgagtaaaatatctacgtcagtcctatgatatcttcaaagagctaattcaatttaagtgagaggtaatatccaagaaaatgtcttctctgcaagg |
27476821 |
T |
|
| Q |
258 |
aatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatc |
357 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27476820 |
aatagttagaccacccattggatgatcatattcaaattgttcctcactttggctcagcagttcttggaatgaggtttggttcaagtatgatacaggaatc |
27476721 |
T |
|
| Q |
358 |
acaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgatg-cctttgatctgatgatacttggt |
456 |
Q |
| |
|
|||||||||||||||||||| || || |||||||||||||| |||||||| || |||| |||||||||||||| ||||| |||||||||| ||| |
|
|
| T |
27476720 |
acaaaccgcttcattttctcaccaacatacactgctagatatccctttggaacgtccacggtttttgaagatgatgtccttt----tgatgatactaggt |
27476625 |
T |
|
| Q |
457 |
aaacgaaaacccattgttgtatgtatgtgttgaaaa |
492 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27476624 |
aaacggaaacccattgttgtatgtatgtgttgaaaa |
27476589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 80 - 395
Target Start/End: Complemental strand, 27460783 - 27460474
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctaca |
179 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| || |||| |||| | |||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
27460783 |
tgagatgaacatttttacaac----tatgataacaacaaaagattaa-tcttctgaaggatagaaactaaactgctacaaaa-tgggtcaaataactacg |
27460690 |
T |
|
| Q |
180 |
tcagtccaatgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattgga |
279 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | |||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27460689 |
tcagtcctatgatatcttcaaagagctaattcaaattaagtgagaggtgatatccaagaaaatgtcttctctgcaaggaatggtgagaccacccattgga |
27460590 |
T |
|
| Q |
280 |
tggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctc |
379 |
Q |
| |
|
|| ||||||||||||||||||||| |||| ||| ||||||||||||||| |||| ||||| ||||||| ||| |||||||| | |||||| | ||||| |
|
|
| T |
27460589 |
tgatcatattcaaattgttcctcactttggctcagcaattcttggaatgatttttgcttcaaatatgatatagggatcacaaatctcttcatgtcctctc |
27460490 |
T |
|
| Q |
380 |
ctacgtacactgctag |
395 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
27460489 |
ctatgtacactgctag |
27460474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 92 - 492
Target Start/End: Complemental strand, 27474178 - 27473793
Alignment:
| Q |
92 |
ttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctacatcagtccaatga |
191 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||| || |||||||||| | |||||||||| ||||||||||||| |||||| ||| |
|
|
| T |
27474178 |
ttttacatccaagtatgataacaacaaaagtgaaaatcttttgaaggttagaaactaaagtgctacaaaaattggtcaaatatctatgtcagtcttttga |
27474079 |
T |
|
| Q |
192 |
tatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattca |
291 |
Q |
| |
|
||||||||| |||||| ||||| |||| |||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
27474078 |
tatcttcaa-------------ttcaagcgagaagtgatgtctaagaaaacgtcttctccgcaaggaatggtgagaccacccattggatgatcatattca |
27473992 |
T |
|
| Q |
292 |
aattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactg |
391 |
Q |
| |
|
|||||||||||| |||| ||| ||||||||||||||| |||| ||||| ||||||| ||| |||||||| | |||||| | ||||||||||||||| | |
|
|
| T |
27473991 |
aattgttcctcactttggctcagcaattcttggaatgatttttgcttcaaatatgatatagggatcacaaatctcttcatctcctctcctacgtacacag |
27473892 |
T |
|
| Q |
392 |
ctagatacccctttggcacctccaaaccttttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgta-tgtatgtgttgaa |
490 |
Q |
| |
|
||||||| |||||||| || ||| | |||||||||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
27473891 |
ctagatatccctttggaacacccacagattttgaagatgatgccct---tttgatgatacttggtaaacgaaaacccattgttgtattgtatgtgttaaa |
27473795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 128 - 326
Target Start/End: Original strand, 27502011 - 27502210
Alignment:
| Q |
128 |
tcttttgaatgtgagaaactaaactactacaaaaa-tgggtcaaatatctacatcagtccaatgatatcttcaaagagctaattcaattcaagtgagaaa |
226 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27502011 |
tcttttgaaggtgagaaactaaactgctacaaaaaatgtgtcaaatatctacgtcagtcctatgatatcttcaaagagctaattcaatttaagtgagagg |
27502110 |
T |
|
| Q |
227 |
tgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaa |
326 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27502111 |
tgatatctaagaaaatgtcttctctgcaaggaatagttagaccacccattggatgatcatattcaaattgttcctcagcttggttcaacaattcttggaa |
27502210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 202 - 480
Target Start/End: Original strand, 27516560 - 27516835
Alignment:
| Q |
202 |
gagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcct |
301 |
Q |
| |
|
|||||| |||||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27516560 |
gagctacttcaattcaagttagaagtgatatctaagaaaacttcttctttgcaaggaatagtgagaccccccattggatggtcatattcaaattgttcct |
27516659 |
T |
|
| Q |
302 |
cagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagataccc |
401 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||| ||||||| ||| |||||||| | |||||| | || |||||| ||||| |||||||| || |
|
|
| T |
27516660 |
cagcttggttcaacaattcttggaatgatttttgcttcaaatatgatatagggatcacaaatctcttcatgtcctttcctacatacacagctagatatcc |
27516759 |
T |
|
| Q |
402 |
ctttggcacctccaaaccttttgaagatgatg-cctttgatctgatgatacttggtaaacgaaaacccattgttgtatgt |
480 |
Q |
| |
|
|||||| || ||| | |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27516760 |
ctttggaacgcccacagattttgaagatgatgaccttt----tgatgatactaggtaaacgaaaacccattgttgtatgt |
27516835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 92 - 492
Target Start/End: Complemental strand, 27467118 - 27466722
Alignment:
| Q |
92 |
ttttacaaccaagtatgataacaacaaaagataaaatcttttgaatgtgagaaactaaactactacaaaaatgggtcaaatatctacatcagtccaatga |
191 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||| |||||| || ||||||||| | ||||||||| | ||| ||||||| ||| || | | |
|
|
| T |
27467118 |
ttttacatccaagtatgataacaacaaaagtggaaatcgtttgaaggttagaaactaatttcatacaaaaattgatcagatatctatgtcaatcttctaa |
27467019 |
T |
|
| Q |
192 |
tatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattca |
291 |
Q |
| |
|
||||||| ||||||| ||||||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
27467018 |
tatcttc--agagctacttcaattcaagctagaagtgatgtctaagaaaacttcttctctgcaaggaatagtgagaccacccattggatgatcatattca |
27466921 |
T |
|
| Q |
292 |
aattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactg |
391 |
Q |
| |
|
|||||||||||| |||| ||| || |||||||||| | |||| ||||| ||||||| ||| |||||||| | |||||| | || |||||||||||||| |
|
|
| T |
27466920 |
aattgttcctcactttggctcagcagttcttggaataatttttgcttcaaatatgatatagggatcacaaatctcttcatctcctttcctacgtacactg |
27466821 |
T |
|
| Q |
392 |
ctagatacccctttggcacctccaaaccttttgaagatgatg-cctttgatctgatgatacttggtaaacgaaaacccattgttgta-tgtatgtgttga |
489 |
Q |
| |
|
||||||| |||||||| || ||| | |||||||||||||| ||||| |||||||||| |||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
27466820 |
ctagatatccctttggaacgcccacagattttgaagatgatgaccttt----tgatgatactaggtaaacggaaacccattgtcgtattgtatgtgttga |
27466725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 221 - 480
Target Start/End: Complemental strand, 27498585 - 27498329
Alignment:
| Q |
221 |
gagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattc |
320 |
Q |
| |
|
||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| || |
|
|
| T |
27498585 |
gagaagtgatatctaagaacatgtcttctccgcaaggaatagtgagaccacccattggatgatcatattcgaattgttcctcggcttggttcaacaagtc |
27498486 |
T |
|
| Q |
321 |
ttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaacct |
420 |
Q |
| |
|
|||||| || | ||||||||||||||||| ||| |||||||| || ||||||| |||||| || || ||||||||||| |||||||||| |||| ||| |
|
|
| T |
27498485 |
ttggaacgatggttggttcaagtatgatatagggatcacaaaacgtttcatttcctctccaacatatactgctagatatccctttggcatgtccacgcct |
27498386 |
T |
|
| Q |
421 |
tttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatgt |
480 |
Q |
| |
|
|||||||| |||| | | ||||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
27498385 |
tttgaagacgatgtcct---tctgatgatacctggtaaacgaaaacccattttcgtatgt |
27498329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 208 - 477
Target Start/End: Original strand, 27500295 - 27500561
Alignment:
| Q |
208 |
attcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagctt |
307 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | || ||||| |||| || |
|
|
| T |
27500295 |
attcaattcaagcaagaagtgaattctaagaaaaggtcttctctgcaaggaatagtgatgccacccattggatggtcatatccgaactgttcttcagatt |
27500394 |
T |
|
| Q |
308 |
ggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|| ||| ||||||||||||||| ||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
27500395 |
ggctcagcaattcttggaatgaactttggtttaagtatgatatagggatcacaaatcgcttcattttctctcctacgtacactgctagatatccttttgg |
27500494 |
T |
|
| Q |
408 |
cacctccaaaccttttgaagatgatg-cctttgatctgatgatacttggtaaacgaaaacccattgttgta |
477 |
Q |
| |
|
|| |||| | |||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
27500495 |
tacgtccacagattttgaagatgatgaccttt----tgatgatactaggtaaacgaaaacccattgttgta |
27500561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 229 - 430
Target Start/End: Original strand, 27444772 - 27444973
Alignment:
| Q |
229 |
atatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatg |
328 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| ||||| ||||| |||||||| |||| |
|
|
| T |
27444772 |
atatctaagaaaacgtcttctctgcaaggaattgtgagaccacccattggatggtcatatccgaattgttcctcggcttgattcaataattcttgaaatg |
27444871 |
T |
|
| Q |
329 |
aggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaaga |
428 |
Q |
| |
|
| | |||| |||||||||||| || |||||||||| |||||||| |||||| ||||| ||||| ||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
27444872 |
atgattggctcaagtatgatattgggatcacaaacctcttcatttcctctccaacgtatactgcaagatatccctttggcacatccacgccttttgaaga |
27444971 |
T |
|
| Q |
429 |
tg |
430 |
Q |
| |
|
|| |
|
|
| T |
27444972 |
tg |
27444973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 222 - 480
Target Start/End: Complemental strand, 27501486 - 27501231
Alignment:
| Q |
222 |
agaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattct |
321 |
Q |
| |
|
|||| ||||||||||||| || |||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
27501486 |
agaagtgatatctaagaacatgtcttctctacaaggaatagtgagaccacccgttggatgatcgtattcaaattgttcctcggcttggttcaacaagtct |
27501387 |
T |
|
| Q |
322 |
tggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaacctt |
421 |
Q |
| |
|
|| || | | |||||| |||||||||| || ||||||||||| ||||||| |||||| || || ||||||||| | |||||||| ||||| | ||||| |
|
|
| T |
27501386 |
tgaaacaatggttggtttaagtatgatattgggatcacaaaccgtttcatttcctctccaacatatactgctagacatccctttggaacctcgacacctt |
27501287 |
T |
|
| Q |
422 |
ttgaagatgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatgt |
480 |
Q |
| |
|
|||||||||||| | | ||| | ||||| |||||||||||||||||| |||||||| |
|
|
| T |
27501286 |
ttgaagatgatgtcct---tcttaggataccaggtaaacgaaaacccattcttgtatgt |
27501231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 215 - 480
Target Start/End: Original strand, 27502771 - 27503030
Alignment:
| Q |
215 |
tcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaa |
314 |
Q |
| |
|
||||| ||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||| ||| |
|
|
| T |
27502771 |
tcaagcgagaagtgatatctacgaaaaaatcttcttcacaaggaatagtaagaccacccattggatggtcatatccaaattcttccacagcttggctcag |
27502870 |
T |
|
| Q |
315 |
caattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctcc |
414 |
Q |
| |
|
||| ||||| ||||| ||||| ||||| ||||| | |||||||||||||||||||| ||||||||||| || || || ||||| || |||||||| ||| |
|
|
| T |
27502871 |
caagtcttgaaatgaagtttgattcaaatatgacattggaatcacaaaccgcttcatcttctctcctacataaacggcaagatatccttttggcacatcc |
27502970 |
T |
|
| Q |
415 |
aaaccttttgaagatgatg-cctttgatctgatgatacttggtaaacgaaaacccattgttgtatgt |
480 |
Q |
| |
|
|| |||||||||||||||| ||||| |||||| ||||||| ||||||||||| |||||||| |
|
|
| T |
27502971 |
aagccttttgaagatgatgaccttt-------tgatacctggtaaatgaaaacccattcttgtatgt |
27503030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 227 - 430
Target Start/End: Complemental strand, 27557653 - 27557450
Alignment:
| Q |
227 |
tgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaa |
326 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| || |
|
|
| T |
27557653 |
tgatatctaagaaaacatcttctctgcatggaatagtgagaccacccattggatgaacatattcaaattgttcctcagcttgattcagcaattcttgaaa |
27557554 |
T |
|
| Q |
327 |
tgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaa |
426 |
Q |
| |
|
||| | |||||| |||||||| | || |||||||||| |||||||| |||||| || || || || ||||| ||| ||||||| |||| ||| |||||| |
|
|
| T |
27557553 |
tgatggttggtttaagtatgacattgggatcacaaacctcttcatttcctctccaacatatacggcaagatatccccttggcacatccacaccctttgaa |
27557454 |
T |
|
| Q |
427 |
gatg |
430 |
Q |
| |
|
|||| |
|
|
| T |
27557453 |
gatg |
27557450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 229 - 410
Target Start/End: Original strand, 27431126 - 27431307
Alignment:
| Q |
229 |
atatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatg |
328 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||| |||| |
|
|
| T |
27431126 |
atatttaagaaaacgtcttctctgcaaggaattgtgagaccaccggttggatggtcatatccaaattgttcctcggcttgattcaacaattcttgaaatg |
27431225 |
T |
|
| Q |
329 |
aggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
| | ||||||||||||||||| || |||||||||| |||||||| || || || || ||||| | ||| ||||||||||| |
|
|
| T |
27431226 |
acggttggttcaagtatgatattgggatcacaaacctcttcatttcatccccaacatatactgcaatatatccctttggcac |
27431307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 215 - 435
Target Start/End: Original strand, 27507777 - 27507997
Alignment:
| Q |
215 |
tcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaa |
314 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||||||||||| |||||| ||| |||| ||| | | |
|
|
| T |
27507777 |
tcaagcgagaagtgatatctaagaaaagatcttcttcacaaggaattgtaagaccacccattggatggtcatatccaaattcttcgacagcctggctgag |
27507876 |
T |
|
| Q |
315 |
caattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctcc |
414 |
Q |
| |
|
||| ||||| | ||| ||||| ||||| ||||| | ||||| ||||||||||||||||| ||||||||||||| || || || |||||||||| ||| |
|
|
| T |
27507877 |
caactcttgaagtgaagtttgattcaaatatgacattggaattacaaaccgcttcatttttactcctacgtacaccgcaaggtatccctttggcatatcc |
27507976 |
T |
|
| Q |
415 |
aaaccttttgaagatgatgcc |
435 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
27507977 |
aagccttttgaagatgatgcc |
27507997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 244 - 410
Target Start/End: Original strand, 27414297 - 27414463
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
||||| ||||| ||||| || ||||||||||||||||| |||||| |||||| ||| || | ||| || | |||||||| ||||||| ||||||||||| |
|
|
| T |
27414297 |
tcttcactgcacggaattgtaagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaatgagggttggttcaagt |
27414396 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||| || |||||||| |
|
|
| T |
27414397 |
atgatacaggaatcacaaaccgtctcattttatctccaacgtagactgcaagatagccttttggcac |
27414463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 480
Target Start/End: Complemental strand, 27554471 - 27554225
Alignment:
| Q |
229 |
atatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatg |
328 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||||| |||| ||||||| |||||| ||||||||||||||||||| |||| ||||||||| || | |
|
|
| T |
27554471 |
atatctaagaaaacgtcttctctacaaggaattgtgagactacccgttggatgatcatatccaaattgttcctcagcttgattcagcaattcttgaaacg |
27554372 |
T |
|
| Q |
329 |
aggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaaga |
428 |
Q |
| |
|
| | |||| | || | || | | ||||||||||||||||||| |||||| || || ||||| || || ||||||||||| |||| ||||||||||| |
|
|
| T |
27554371 |
atggttggcttaacaaagaaattgatatcacaaaccgcttcatttcctctccaacatatactgcaaggtatccctttggcacatccactccttttgaaga |
27554272 |
T |
|
| Q |
429 |
tgatgcctttgatctgatgatacttggtaaacgaaaacccattgttgtatgt |
480 |
Q |
| |
|
|| ||| | ||| ||||| |||||||||||||||||| |||||||| |
|
|
| T |
27554271 |
tg-----cttggtttgaggataccaggtaaacgaaaacccattcttgtatgt |
27554225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 244 - 410
Target Start/End: Complemental strand, 17970446 - 17970280
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||||||| || ||| | |||| |||||| || | ||| ||| | ||| ||||| ||||||||||||| |
|
|
| T |
17970446 |
tcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttggttcaagt |
17970347 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||| |||||||| || ||||| ||||||||||| |
|
|
| T |
17970346 |
atgacgtagggatcacaaaccgcttcatttcctctccaacgtacaccgcaagatatccctttggcac |
17970280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 389
Target Start/End: Complemental strand, 27504062 - 27503924
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||||| |||| | |||||| ||||| ||||||| ||||| ||||| | |||||||||||||||||| |
|
|
| T |
27504062 |
tgcaaggaatggtgaggccacccattggatgatcatatccaaactcttcctcggcttgactcaacaagtcttgaaatgaaggttggttcaagtatgatac |
27503963 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacac |
389 |
Q |
| |
|
||||| ||||||||| || ||||||||| || ||||| |
|
|
| T |
27503962 |
aggaactacaaaccgcgccaatttctctccaacatacac |
27503924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 250 - 407
Target Start/End: Original strand, 27424513 - 27424670
Alignment:
| Q |
250 |
ctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgata |
349 |
Q |
| |
|
||||| ||||| || ||||||||||||||||| |||||| || ||| ||| |||| ||| || | ||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
27424513 |
ctgcacggaatggtaagaccacccattggatgatcatatccatattcttcttcagattgatttagcaattcttgaaatgaaggttggttcaagtatgata |
27424612 |
T |
|
| Q |
350 |
caggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
| ||||||||||||||| |||||| ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27424613 |
ctggaatcacaaaccgcctcatttgatctccaacatagactgcgagatagccttttgg |
27424670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 251 - 392
Target Start/End: Complemental strand, 27524664 - 27524523
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||| |||||| |||| | |||||||||||| |||||||| ||||| ||||| | ||||||||| |||||||| |
|
|
| T |
27524664 |
tgcacggaatggtgaggccacccattggatgatcatatccaaactcttcctcagcttgattcaacaagtcttgaaatgaaggttggttcaaatatgatac |
27524565 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgc |
392 |
Q |
| |
|
||||| | |||||| ||| ||||||||| || |||||||| |
|
|
| T |
27524564 |
aggaactatgaaccgcgtcagtttctctccaacatacactgc |
27524523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 407
Target Start/End: Complemental strand, 27567436 - 27567239
Alignment:
| Q |
210 |
tcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttgg |
309 |
Q |
| |
|
|||||||||||||||| ||| ||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||| |||||| ||| || | ||| |
|
|
| T |
27567436 |
tcaattcaagtgagaagtgagttctaagaaagcatcttcgctgcaaggaattgtgagaccacccattggatgatcataaccaaattcttcttctgtttga |
27567337 |
T |
|
| Q |
310 |
ttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|| | |||||||| || || | |||||||||||||||||| |||||||| ||||| ||||| | ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27567336 |
tttagtaattcttgaaacgatggttggttcaagtatgatactggaatcacgaaccgtctcattctatctccaacatagactgcgagatagccttttgg |
27567239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 432
Target Start/End: Original strand, 27570049 - 27570230
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| | || | |||||||||||| ||| ||| ||||| ||||| | |||| | ||||||||||| |
|
|
| T |
27570049 |
tgcaaggaatggtgaggccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaagtatgatac |
27570148 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgat |
432 |
Q |
| |
|
|| |||||| ||||| || ||||||||| || || ||||| ||||| ||||||||||| |||| | ||||||||| |||| |
|
|
| T |
27570149 |
ggggatcacataccgcgtctgtttctctccaacatatactgcaagatatccctttggcacatccacagcttttgaagctgat |
27570230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 407
Target Start/End: Original strand, 27411455 - 27411612
Alignment:
| Q |
250 |
ctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgata |
349 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| |||||| |||||| ||| || ||||| || | |||||||| || || | ||||||||||||||||| |
|
|
| T |
27411455 |
ctgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaacgatggttggttcaagtatgata |
27411554 |
T |
|
| Q |
350 |
caggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
| |||||||| ||||| ||||| | ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27411555 |
ctggaatcacgaaccgtctcattctatctccaacatagactgcgagatagccttttgg |
27411612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 432
Target Start/End: Complemental strand, 27425952 - 27425771
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||| | ||||||| ||| |||| || ||||| ||||| | ||||||||||||||||| |
|
|
| T |
27425952 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
27425853 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgat |
432 |
Q |
| |
|
|| |||||| ||||||| ||||||||| || || ||||| ||||| ||||||||||| |||| | |||| |||| |||| |
|
|
| T |
27425852 |
tgggatcacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
27425771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 27475580 - 27475717
Alignment:
| Q |
252 |
gcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgataca |
351 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||| |||| | |||||| ||||| ||||||| ||||| ||||| | ||| ||||||||||||||| |
|
|
| T |
27475580 |
gcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcggcttgactcaacaagtcttgaaatgaaggttgattcaagtatgataca |
27475679 |
T |
|
| Q |
352 |
ggaatcacaaaccgcttcattttctctcctacgtacac |
389 |
Q |
| |
|
|||| ||||||||| || ||||||||| || ||||| |
|
|
| T |
27475680 |
ggaactacaaaccgcgccaatttctctccaacatacac |
27475717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 424
Target Start/End: Original strand, 27563346 - 27563519
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||||| |||| | ||| || ||||| ||| ||| ||||| || | |||||||||||||||||||| |
|
|
| T |
27563346 |
tgcaaggaattgtgaggccacccattggatgatcatatccaaactcttcttcggcttgactcagcaaatcttgaaacaatgtttggttcaagtatgatac |
27563445 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttg |
424 |
Q |
| |
|
|| ||||||| | ||| ||| ||||| ||||||||||| ||||| ||||||||||| |||| | |||||| |
|
|
| T |
27563446 |
ggggatcacaattctcttttgtttatctccaacgtacactgcaagatagccctttggcacgtccacaacttttg |
27563519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 426
Target Start/End: Complemental strand, 27415768 - 27415589
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||| | ||| |||||| |||| | |||||||||||| ||||||| ||||| || || | ||||||||||| |
|
|
| T |
27415768 |
tcttctgtgcaaggaatggtgaggccacccatggaatgatcatatccaaactcttcctcagcttgactcaacaagtcttgaaacgatggttggttcaagt |
27415669 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaa |
426 |
Q |
| |
|
|||||| || |||||||| |||| ||| | ||| || |||||||| ||||| ||||||||||| |||| | |||||||| |
|
|
| T |
27415668 |
atgatatggggatcacaaatcgct---tttgttttccaacatacactgcaagatatccctttggcacatccacaacttttgaa |
27415589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 389
Target Start/End: Original strand, 27468327 - 27468465
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||||| |||||| | ||| ||||||| ||||| ||||| | |||||| ||||||||||| |
|
|
| T |
27468327 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcctcggattgactcaacaagtcttgaaatgaaggttggtttaagtatgatac |
27468426 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacac |
389 |
Q |
| |
|
||| | ||||||||| || ||||||||| || ||||| |
|
|
| T |
27468427 |
agggactacaaaccgcaccagtttctctccaacatacac |
27468465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 244 - 426
Target Start/End: Complemental strand, 27585835 - 27585653
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| |||||||||| |||||||| ||||||||||| |||||| |||| | ||| || ||||| ||| ||| ||||| || | | ||||||||||| |
|
|
| T |
27585835 |
tcttctgtgcaaggaatggtgagacctcccattggatgatcatatccaaactcttcttcggcttgactcatcaaatcttgaaacaatggttggttcaagt |
27585736 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaa |
426 |
Q |
| |
|
||||||| || |||||||| | ||| ||| || || ||| ||||||| ||||| ||||||||||| |||| | |||||||| |
|
|
| T |
27585735 |
atgatacggggatcacaaatctcttttgtttatcaccaacgcacactgcgagatatccctttggcacgtccacaacttttgaa |
27585653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 389
Target Start/End: Complemental strand, 27515038 - 27514893
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| | |||||||| ||||| |||||||| ||||| |||||| |||||| |||||| | ||| ||||||| ||||| ||||| | ||| ||||||| |
|
|
| T |
27515038 |
tcttctgtacaaggaatggtgaggccacccatgggatgatcatatccaaattcttcctcggattgactcaacaagtcttgaaatgaaggttgattcaagt |
27514939 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacac |
389 |
Q |
| |
|
|||||||||| | ||||||||| || ||||||||| || ||||| |
|
|
| T |
27514938 |
atgatacagggactacaaaccgcaccagtttctctccaacatacac |
27514893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 251 - 365
Target Start/End: Complemental strand, 27412804 - 27412690
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||||| |||| | ||| |||||||| |||| || ||||| ||| | | ||||||||||||||||| |
|
|
| T |
27412804 |
tgcaaggaatggtgaggccacccattggatgatcatatccaaactcttcttcagcttgactcaataagtcttgaaataatggttggttcaagtatgatat |
27412705 |
T |
|
| Q |
351 |
aggaatcacaaaccg |
365 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
27412704 |
tgggatcacaaaccg |
27412690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 432
Target Start/End: Complemental strand, 27420548 - 27420367
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||| | ||||||| |||| ||| ||| |||| ||||| | |||| ||||||||||||| |
|
|
| T |
27420548 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaacttgactcagcaagccttgaaatgaaggttggctcaagtatgatac |
27420449 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgat |
432 |
Q |
| |
|
|| || | | ||||| || ||||||||| || || ||||| ||||| ||||||||||| |||| | |||||||| |||| |
|
|
| T |
27420448 |
ggggattaaataccgcgtctgtttctctccaacatatactgcaagatatccctttggcacgtccacagattttgaagctgat |
27420367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 426
Target Start/End: Original strand, 27565953 - 27566126
Alignment:
| Q |
253 |
caaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacag |
352 |
Q |
| |
|
|||||||| ||||| |||||||||||||| |||||| || | ||||||| |||| ||| ||| ||||| || | | |||||||| |||||||| | |
|
|
| T |
27565953 |
caaggaatggtgaggccacccattggatgatcatatccatgctcttcctcaacttgtatcagcaagtcttgaaacaatggttggttcaggtatgatatgg |
27566052 |
T |
|
| Q |
353 |
gaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaa |
426 |
Q |
| |
|
| |||||||| ||||| ||||||||| || |||||||| ||||| ||||||||||| |||| | |||||||| |
|
|
| T |
27566053 |
ggatcacaaatcgcttttgtttctctccaacatacactgcaagatatccctttggcacgtccacaacttttgaa |
27566126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 500 - 556
Target Start/End: Complemental strand, 27479771 - 27479715
Alignment:
| Q |
500 |
ttgtttgtaaatagaatgctcaagtttctgaatttcaaatgcttttggttgtgaatg |
556 |
Q |
| |
|
||||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
27479771 |
ttgtttgtaaacagaaggctcaagtttctgactttcaaatggttttggttgtgaatg |
27479715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 251 - 407
Target Start/End: Original strand, 27485943 - 27486099
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||||| ||| || ||||| | | ||||||||| || | | ||||||||||||||||| |
|
|
| T |
27485943 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggttcaagtatgatat |
27486042 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|| | |||||||||||| ||||||||| || |||||||| | ||| |||||||| |
|
|
| T |
27486043 |
tgggacaacaaaccgcttctgtttctctccaacatacactgcaacatagccctttgg |
27486099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 27478884 - 27479039
Alignment:
| Q |
252 |
gcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgataca |
351 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||| |||||| ||| || ||||| | | ||||||||| || | | ||||||||||||||||| |
|
|
| T |
27478884 |
gcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggttcaagtatgatatt |
27478983 |
T |
|
| Q |
352 |
ggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|| | |||||||||||| ||||||||| || |||||||| | ||| |||||||| |
|
|
| T |
27478984 |
gggacaacaaaccgcttctgtttctctccaacatacactgcaacatagccctttgg |
27479039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 390
Target Start/End: Complemental strand, 27490096 - 27489961
Alignment:
| Q |
255 |
aggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacagga |
354 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||| |||| | |||||| ||||| |||||||| ||||| ||||| | || ||| |||||||| ||||| |
|
|
| T |
27490096 |
aggaatggtgaggccacccattggatgatcatatccaaactcttcctcggcttgattcaacaaatcttgaaatgatggtttgtttaagtatgacacaggg |
27489997 |
T |
|
| Q |
355 |
atcacaaaccgcttcattttctctcctacgtacact |
390 |
Q |
| |
|
| |||||||| || ||||||||| || |||||| |
|
|
| T |
27489996 |
actacaaaccgtttttgtttctctccaacatacact |
27489961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 407
Target Start/End: Original strand, 27556372 - 27556535
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||| | ||| |||||| |||||| ||| || ||||| | | |||||||| ||||| | ||||||||| |
|
|
| T |
27556372 |
tcttcactgcatggaattgtgagaccacccatagaatgatcatatccaaattcttcttctgcttgatgtagtaattcttgaaatgaaggttggttcaata |
27556471 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|||| | ||||||||||| ||||||||||| ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27556472 |
atgaaatgggaatcacaaatcgcttcattttttctccaacataaactgcgagatagccttttgg |
27556535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 27571762 - 27571607
Alignment:
| Q |
252 |
gcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgataca |
351 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| |||||| ||| || | ||| || | |||||||| || || | ||| |||| |||||||| |
|
|
| T |
27571762 |
gcaaggaattgtgagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaacgatggctggctcaaatatgatact |
27571663 |
T |
|
| Q |
352 |
ggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|||||||| |||||| ||||| | ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27571662 |
ggaatcacgaaccgcctcattctatctccaacatagactgcgagatagccttttgg |
27571607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 244 - 407
Target Start/End: Original strand, 27421924 - 27422091
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattca----aattgttcctcagcttggttcaacaattcttggaatgaggtttggttc |
339 |
Q |
| |
|
||||| ||||||||||| |||||||||||| ||||||| || ||| || |||| ||| || ||||| || | |||||||| ||| | | ||||||| |
|
|
| T |
27421924 |
tcttcactgcaaggaattgtgagaccacccgttggatgatcgtatccatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttc |
27422023 |
T |
|
| Q |
340 |
aagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
||||||||||| |||||||| ||||| |||||| | ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27422024 |
aagtatgatactggaatcacgaaccgtttcattctatctccaacatagactgcgagatagccttttgg |
27422091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 407
Target Start/End: Complemental strand, 27506838 - 27506682
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||||| ||| || ||||| | | ||||||||| || | | |||||| |||||||||| |
|
|
| T |
27506838 |
tgcaaggaatggtgagtccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggtttaagtatgatat |
27506739 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|| |||||||||||| || ||||||||| || || ||||| | ||| |||||||| |
|
|
| T |
27506738 |
tgggatcacaaaccgcgtctgtttctctccgacatatactgcaacatagccctttgg |
27506682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 27419072 - 27419227
Alignment:
| Q |
252 |
gcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgataca |
351 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||| |||||| ||| || | ||| || | |||||||| || || | ||| |||| |||||||| |
|
|
| T |
27419072 |
gcaaggaattgtaagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaacgatggctggctcaaatatgatact |
27419171 |
T |
|
| Q |
352 |
ggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|||||||| |||||| ||||| | ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27419172 |
ggaatcacgaaccgcctcattctatctccaacatagactgcgagatagccttttgg |
27419227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 27495689 - 27495646
Alignment:
| Q |
238 |
aaaatctcttctctgcaaggaatagtgagaccacccattggatg |
281 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
27495689 |
aaaatatcttctctgcaaggaatggtgagaccacccattggatg |
27495646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 407
Target Start/End: Original strand, 27559233 - 27559396
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| |||||| |||| | ||| || | |||| | || || | ||| ||||| | ||| ||||| |
|
|
| T |
27559233 |
tcttcactgcaaggaattgtgagaccacccattggatgatcatatccaaactcttcttctgattggcttaataactattgaaatgaagattgattcaata |
27559332 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|||| | |||||||| ||| | ||||||||| ||||| || || ||||| ||||| || ||||| |
|
|
| T |
27559333 |
atgaaataggaatcagaaatctcttcattttgtctccaacataaactgcgagatagccttttgg |
27559396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 349
Target Start/End: Complemental strand, 27423400 - 27423264
Alignment:
| Q |
213 |
attcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttc |
312 |
Q |
| |
|
||||||||||||| | |||| | ||||| ||||| ||||||||| ||||| |||||||| ||||| | || |||| | |||||| ||||| || |
|
|
| T |
27423400 |
attcaagtgagaagttatatgttggaaaacatcttccgtgcaaggaacggtgaggccacccatgggatgattgtaaccaaactcttcctcggcttgactc |
27423301 |
T |
|
| Q |
313 |
aacaattcttggaatgaggtttggttcaagtatgata |
349 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
27423300 |
aacaattcttgaaatgaaggttggttcaagtatgata |
27423264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 380
Target Start/End: Complemental strand, 27446306 - 27446158
Alignment:
| Q |
232 |
tctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgagg |
331 |
Q |
| |
|
|||||||||| ||||| ||||||||||| | ||||||| ||||| |||| ||||||||||| | ||| || | |||| | ||| | ||||| ||||| | |
|
|
| T |
27446306 |
tctaagaaaacatcttcactgcaaggaatcgagagaccatccattcgatgatcatattcaaactcttcttctgattggcttaacgactcttgaaatgaag |
27446207 |
T |
|
| Q |
332 |
tttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcc |
380 |
Q |
| |
|
||| ||||| |||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
27446206 |
gttgattcaataatgaagttggaatcacaaatcgcttcattttttctcc |
27446158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 407
Target Start/End: Original strand, 27497322 - 27497478
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| ||||| | ||||| |||||| |||| | |||||||||||| ||||||| | ||| || | | |||||| |||||||| | |
|
|
| T |
27497322 |
tgcaaggaatggtgaggccacctgtgggatgatcatatccaaactcttcctcagcttgactcaacaaatattgaaacaatggttggtttaagtatgagat |
27497421 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
||| |||||||||||||| ||| ||||| || |||||||| | ||| |||||||| |
|
|
| T |
27497422 |
agggatcacaaaccgcttttgtttatctccaacatacactgcaacatagccctttgg |
27497478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 27476964 - 27476928
Alignment:
| Q |
80 |
tgagatgaacatttttacaaccaagtatgataacaaca |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27476964 |
tgagatgaacatttttacaa-caagtatgataacaaca |
27476928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 27600700 - 27600663
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatg |
281 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
27600700 |
tcttctttgcaaggaattgtgagaccacccattggatg |
27600663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 130; Significance: 4e-67; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 189 - 387
Target Start/End: Complemental strand, 1759454 - 1759252
Alignment:
| Q |
189 |
tgatatcttcaaagagctaattcaattcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatat |
288 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||| |
|
|
| T |
1759454 |
tgatattttcagagagctgattcaattcaagtgagaagtgatatctaagaaaacttcttctctgcaaagaatggtgagaccacccattggatggttgtat |
1759355 |
T |
|
| Q |
289 |
tcaaattgttcctcag----cttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacg |
384 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1759354 |
tcaaattgttcctcagcttgcttggctcaacaattcttggaatgatgtttggtttaaatatgatacaggaatcacaaaccgcttcattttctctcctacg |
1759255 |
T |
|
| Q |
385 |
tac |
387 |
Q |
| |
|
||| |
|
|
| T |
1759254 |
tac |
1759252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 480
Target Start/End: Original strand, 1754206 - 1754467
Alignment:
| Q |
215 |
tcaagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaa |
314 |
Q |
| |
|
||||| ||||| ||||||||||||||| | |||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||| || ||| | |
|
|
| T |
1754206 |
tcaagcgagaagtgatatctaagaaaaggt-ttctctacaaggaatagtgagaccacccatcggatgatcatattcaaactgttcctcagatttgtttag |
1754304 |
T |
|
| Q |
315 |
caattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctcc |
414 |
Q |
| |
|
||||| ||| ||||| | |||||||||||||||||| || ||||||||||||||||||| ||||| || || || |||||||| || |||||| | ||| |
|
|
| T |
1754305 |
caatttttgaaatgacgattggttcaagtatgatacggggatcacaaaccgcttcatttcttctccaacatatacagctagatatccttttggctcgtcc |
1754404 |
T |
|
| Q |
415 |
aaaccttttgaagatgatg-cctttgatctgatgatacttggtaaacgaaaacccattgttgtatgt |
480 |
Q |
| |
|
| ||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1754405 |
acgccttttggggatgatgtccttt----tgatgatactaggtaaacgaaaacccattgttgtatgt |
1754467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 407
Target Start/End: Original strand, 1756757 - 1756913
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| |||||||| || || |||||| |||||| ||| |||||||| ||||||| | ||| || || | ||||||||||||||||| |
|
|
| T |
1756757 |
tgcaaggaatggtgaggccacccatggggtgatcatatccaaattcttcttcagcttgactcaacaagtattgaaacgatggttggttcaagtatgatat |
1756856 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|| ||||||||||||||| ||||||||| || | |||||| ||||| |||||||| |
|
|
| T |
1756857 |
tgggatcacaaaccgcttctgtttctctccaacattcactgcaagatagccctttgg |
1756913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 407
Target Start/End: Complemental strand, 1754835 - 1754672
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| ||||| |||| ||||| |||||||||||||| |||||| |||| | |||| ||||||| ||||||| ||| || || | ||| ||||||| |
|
|
| T |
1754835 |
tcttctgtgcaaagaatggtgaggccacccattggatgatcatatccaaactcttccgcagcttgactcaacaaggattgaaacgatggttgattcaagt |
1754736 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
|||||| || |||||| ||| ||| ||||||||| | |||||||| | ||| |||||||| |
|
|
| T |
1754735 |
atgatattgggatcacatgccgtttctgtttctctccaatatacactgcaacatagccctttgg |
1754672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 1754502 - 1754558
Alignment:
| Q |
503 |
tttgtaaatagaatgctcaagtttctgaatttcaaatgcttttggttgtgaatgatt |
559 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||| || | ||||||||||| |
|
|
| T |
1754502 |
tttgtatatagaagactcaagtttctgaatttcaaatgccttggaatgtgaatgatt |
1754558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 221 - 410
Target Start/End: Original strand, 50904762 - 50904951
Alignment:
| Q |
221 |
gagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattc |
320 |
Q |
| |
|
||||| |||||| || |||| |||||||||||||||||| ||||| |||||||||||||| |||||| | |||| ||||| ||| | ||||||| || |
|
|
| T |
50904762 |
gagaagtgatatgcaaaaaaacctcttctctgcaaggaatggtgaggccacccattggatgatcatatccgaattcatcctctgctcgactcaacaagtc |
50904861 |
T |
|
| Q |
321 |
ttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
||| ||||| |||||||||||||| || | | | ||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
50904862 |
ttgaaatgaagtttggttcaagtaggacatatggatcacaaaccgcttcatttcttctccaacgtacactgcaagatatccctttggcac |
50904951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 235 - 410
Target Start/End: Complemental strand, 55084942 - 55084767
Alignment:
| Q |
235 |
aagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggttt |
334 |
Q |
| |
|
||||||| |||||| |||||||||| ||||| |||||||||||||| || ||| |||||| |||||| || | ||||||| ||||| ||||| | || |
|
|
| T |
55084942 |
aagaaaacatcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccaaattcttcctccgcccgactcaacaagtcttgaaatgatggtt |
55084843 |
T |
|
| Q |
335 |
ggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||||||||| || | ||| |||||||||||||||||||||||||| || |||||||| ||| |||| |||||||| |
|
|
| T |
55084842 |
ggttcaagtaagacatagggatcacaaaccgcttcattttctctccaacatacactgcaagacacccttttggcac |
55084767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 217 - 410
Target Start/End: Original strand, 38028732 - 38028925
Alignment:
| Q |
217 |
aagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaaca |
316 |
Q |
| |
|
||||||||| | |||| ||||||| |||||| |||||||||| ||||| || |||||||||||||||||| |||||| |||||| ||||| |||||| |
|
|
| T |
38028732 |
aagtgagaagtaatatgcaagaaaacgtcttctgtgcaaggaattgtgaggccgcccattggatggtcatatccaaattcttcctcggcttgactcaaca |
38028831 |
T |
|
| Q |
317 |
attcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
| ||| ||||| | ||||||||||||||| || || ||||| |||||||||| |||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
38028832 |
ggttttgaaatgaagcttggttcaagtatgacgtggggataacaaatcgcttcatttgctctccaacgtacactgcaagatagccctttggcac |
38028925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 251 - 410
Target Start/End: Complemental strand, 38044043 - 38043884
Alignment:
| Q |
251 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
350 |
Q |
| |
|
|||||||||| ||||| || ||||||||||| |||||| |||||| |||||| ||||| ||| ||| ||||| || || ||||| ||||||||||| | |
|
|
| T |
38044043 |
tgcaaggaattgtgaggccgcccattggatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaacgaagtttgattcaagtatgacat |
38043944 |
T |
|
| Q |
351 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
||| ||||||||||||||||||| |||||| | ||||||||| ||||| | ||||||||| |
|
|
| T |
38043943 |
agggatcacaaaccgcttcatttcctctccaaagtacactgcaagatagctctttggcac |
38043884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 244 - 410
Target Start/End: Complemental strand, 50910107 - 50909941
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||||||| |||||| |||||| |||||| |||| |||||||| | ||| ||||| | ||||||||||| |
|
|
| T |
50910107 |
tcttctgtgcaaggaattgtgaggccacccattggatgatcatatccaaattcttcctccacttgattcaacaagttttgaaatgaagcttggttcaagt |
50910008 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||| | || || ||||||||| ||||| |||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
50910007 |
atgacatggggataacaaaccgcagcatttgctctccaacatacactgcaagataaccctttggcac |
50909941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 217 - 410
Target Start/End: Original strand, 38040047 - 38040240
Alignment:
| Q |
217 |
aagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaaca |
316 |
Q |
| |
|
||||||||| | |||| ||||||| |||||| |||||||||| ||||| || |||||||||||||||||| | |||| |||||| ||||| |||||| |
|
|
| T |
38040047 |
aagtgagaagtaatatgcaagaaaacgtcttctgtgcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttgactcaaca |
38040146 |
T |
|
| Q |
317 |
attcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
| ||| ||||| | ||||||||||||||| || || ||||| |||||||||| |||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
38040147 |
ggttttgaaatgaagcttggttcaagtatgacgtggggataacaaatcgcttcatttgctctccaacgtacactgcaagatagccctttggcac |
38040240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 410
Target Start/End: Original strand, 38036759 - 38036952
Alignment:
| Q |
217 |
aagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaaca |
316 |
Q |
| |
|
||||||||| | |||| ||||||| | |||| |||||||||| ||||| || |||||||||||||||||| | |||| |||||| ||||| |||||| |
|
|
| T |
38036759 |
aagtgagaagtaatatgcaagaaaacgtattctgtgcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttgactcaaca |
38036858 |
T |
|
| Q |
317 |
attcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
| | ||| ||||| | |||||||||||||| | || | |||||||| ||||||| |||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
38036859 |
aattttgaaatgaagcttggttcaagtatggcatggggacaacaaaccgtttcatttgctctccaacgtacactgcaagatagccctttggcac |
38036952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 38024861 - 38025031
Alignment:
| Q |
237 |
gaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttgg |
336 |
Q |
| |
|
|||||| |||||| |||||||||| ||||| ||||||||||| || |||||| |||||| |||||| ||||| |||| || | ||| || || | |||| |
|
|
| T |
38024861 |
gaaaatgtcttctgtgcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttgg |
38024960 |
T |
|
| Q |
337 |
ttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
||||||||||| | || || |||||||||||||||| |||||| || || ||||| ||||| |||||||| |
|
|
| T |
38024961 |
ttcaagtatgacatggggataacaaaccgcttcatttgctctccaacatatactgcaagatagccctttgg |
38025031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 38031313 - 38031483
Alignment:
| Q |
237 |
gaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttgg |
336 |
Q |
| |
|
|||||| |||||| |||||||||| ||||| ||||||||||| || |||||| |||||| |||||| ||||| |||| || | ||| || || | |||| |
|
|
| T |
38031313 |
gaaaatgtcttctgtgcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttgg |
38031412 |
T |
|
| Q |
337 |
ttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
||||||||||| | || || |||||||||||||||| |||||| || || ||||| ||||| |||||||| |
|
|
| T |
38031413 |
ttcaagtatgacatggggataacaaaccgcttcatttgctctccaacatatactgcaagatagccctttgg |
38031483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 410
Target Start/End: Original strand, 38033802 - 38033938
Alignment:
| Q |
274 |
attggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattt |
373 |
Q |
| |
|
||||||||||||||| |||||| |||||| ||||| ||||||| | ||| ||||| | ||||||||||||||| || || |||||||||||||||| |
|
|
| T |
38033802 |
attggatggtcatatccaaattcttcctcggcttgactcaacaagttttgaaatgaagcttggttcaagtatgacgtggggataacaaaccgcttcattt |
38033901 |
T |
|
| Q |
374 |
tctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||||| | ||||||||| ||||| ||||||||||| |
|
|
| T |
38033902 |
gctctccaatgtacactgcaagatagccctttggcac |
38033938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 410
Target Start/End: Original strand, 48840696 - 48840870
Alignment:
| Q |
235 |
aagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggttt |
334 |
Q |
| |
|
||||||| |||||| |||||||||| ||||| |||||||||||||| |||||| |||||| || ||| ||| | |||||| ||||| ||||||| || |
|
|
| T |
48840696 |
aagaaaacatcttctgtgcaaggaattgtgaggccacccattggatgatcatatccaaattctttctccacttact-caacaagtcttgaaatgaggctt |
48840794 |
T |
|
| Q |
335 |
ggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||||||||||| | || || ||||| |||||||| | |||||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
48840795 |
ggttcaagtatggcatggggattacaaatcgcttcatctcctctccgacgtacaatgcaagatatccctttggcac |
48840870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 245 - 410
Target Start/End: Original strand, 50911863 - 50912028
Alignment:
| Q |
245 |
cttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagta |
344 |
Q |
| |
|
||||| |||||||||| || || ||||||||||| || |||||| |||||| |||||| ||||| ||||||| | ||| ||||| | |||||||||||| |
|
|
| T |
50911863 |
cttctgtgcaaggaattgttaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaacaagttttgaaatgaagcttggttcaagta |
50911962 |
T |
|
| Q |
345 |
tgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
||| || ||||||||||| ||||| || ||||| || || || || ||||| ||||||||||| |
|
|
| T |
50911963 |
tgacttggggatcacaaaccgtttcatcttgtctccaacatataccgcaagatagccctttggcac |
50912028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 48838719 - 48838781
Alignment:
| Q |
317 |
attcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctc |
379 |
Q |
| |
|
||||||| ||||| | |||||||| ||| || || |||||||||||||||||||||| ||||| |
|
|
| T |
48838719 |
attcttgaaatgaagattggttcaggtaggacacgggaatcacaaaccgcttcatttcctctc |
48838781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 55088043 - 55088081
Alignment:
| Q |
243 |
ctcttctctgcaaggaatagtgagaccacccattggatg |
281 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
55088043 |
ctcttctttgcatggaatagtgagaccacccattggatg |
55088081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 244 - 410
Target Start/End: Complemental strand, 3073716 - 3073550
Alignment:
| Q |
244 |
tcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagt |
343 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||||||| || ||| | |||| |||||| || | ||| ||| | ||| ||||| ||||||||||||| |
|
|
| T |
3073716 |
tcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttggttcaagt |
3073617 |
T |
|
| Q |
344 |
atgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||| |||||||| || ||||| ||||||||||| |
|
|
| T |
3073616 |
atgacgtagggatcacaaaccgcttcatttcctctccaacgtacaccgcaagatatccctttggcac |
3073550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 410
Target Start/End: Original strand, 21604720 - 21604913
Alignment:
| Q |
217 |
aagtgagaaatgatatctaagaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaaca |
316 |
Q |
| |
|
||||||||| | |||| ||||||| |||||| |||||||||| ||||| || |||||||||||||||||| | |||| |||||| |||| |||||| |
|
|
| T |
21604720 |
aagtgagaagtaatatgcaagaaaacgtcttctgtgcaaggaattgtgaggccgcccattggatggtcatatcctaattcttcctcgtcttgactcaaca |
21604819 |
T |
|
| Q |
317 |
attcttggaatgaggtttggttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcac |
410 |
Q |
| |
|
| ||| ||||| | ||||||||||||||| || || ||||| |||||||||| ||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
21604820 |
tgttttgaaatgaagcttggttcaagtatgacgtggggataacaaatcgcttcatttgctctcctacttacactgcaagatagccctttggcac |
21604913 |
T |
|
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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 21607282 - 21607452
Alignment:
| Q |
237 |
gaaaatctcttctctgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttgg |
336 |
Q |
| |
|
|||||| |||||| ||||||||| ||||| ||||||||||| || |||||| |||||| |||||| ||||| |||| || | ||| || || | | || |
|
|
| T |
21607282 |
gaaaatatcttctgtgcaaggaaccgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagctcgg |
21607381 |
T |
|
| Q |
337 |
ttcaagtatgatacaggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg |
407 |
Q |
| |
|
||||||||||| | || || |||||||||||||||| |||||| || || || || ||||| |||||||| |
|
|
| T |
21607382 |
ttcaagtatgacatggggataacaaaccgcttcatttgctctccaacatataccgcaagatatccctttgg |
21607452 |
T |
|
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