View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14020_low_6 (Length: 343)
Name: NF14020_low_6
Description: NF14020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14020_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 21644697 - 21645021
Alignment:
| Q |
1 |
aaaacagggtaaattcactaacaaggcttctcaaatcactcaccaatgcctactatctaggagatgaaattccaatcactttcaacatggatagtagagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21644697 |
aaaacagggtaaattcactaacaaggcttctcaaatcactcaccaatgcctactatctaggagatgaaattccaatcactttcaacatggatagtagagt |
21644796 |
T |
|
| Q |
101 |
tgatgaagaaaccataaaactagtaggttcatttgaatggccacatggatcaaaaacactaagaagaagaatcatccaaggtggactcataagagcagtg |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21644797 |
tgatgaagcaaccataaaactagtaggttcatttgaatggccacatggatcaaaaacactaagaagaagaatcatccaaggtggactcataagagcagtg |
21644896 |
T |
|
| Q |
201 |
agtgaaagttggtatccatcttcagatgacaacttcggattactacttgaaggtgacattgaagtctcaccttattactacctatggatcaaatatgcac |
300 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21644897 |
agtgaaagttggtatccatcttcagatgacaactttggattactacttgaagatgatattgaagtctcaccttattactacctatggatcaaatatgcac |
21644996 |
T |
|
| Q |
301 |
tcatgaattaccattatgaccctca |
325 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
21644997 |
tcatgaattaccattatgaccctca |
21645021 |
T |
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