View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14023_high_13 (Length: 431)
Name: NF14023_high_13
Description: NF14023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14023_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 409
Target Start/End: Complemental strand, 26341063 - 26340655
Alignment:
| Q |
1 |
tgcacccggccagatctcacttcagttactgtattctaggcccattcacaactgaaaatctttcctttatgtattcccacatttctttcgtagtatatgt |
100 |
Q |
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||||||||| ||||||| |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26341063 |
tgcacccggtcagatctgacttcaatttctgtattataggcccattcacaactgaaaatctttcctttatgtattcccacatttctttcgtagtatatgt |
26340964 |
T |
|
| Q |
101 |
atacgatatggtggaacgcatggaagtttcaaccgtgttaagtatccatgaaactatcatggattgcaccgtccaccaatattccatgtcatgtgagttt |
200 |
Q |
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|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
26340963 |
atacgatatggtggaacgcacggaaggttcaaccgtgttaagtatccatgaaactatcatggattgcaccgtccaccaatcttccatgtcatgtgagttt |
26340864 |
T |
|
| Q |
201 |
tctgcaggttttgggatgcttccttctattaatccccattttctctgcgcacataacaaatttttcatggcacgagccgattcatcctagttttcgcctc |
300 |
Q |
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|||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| |
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| T |
26340863 |
tctgcaggttttgggatgattccttctattaatccccattctctctgcgcacgtaacaaatttttcatggcacgagccgattcatcgtagttttcgtctc |
26340764 |
T |
|
| Q |
301 |
gaagttgaacttaagttattatgttacctggattgtcgtagttgttcaagtcataaggagacaccattatgtttccttgacttgaagagacttccaattt |
400 |
Q |
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||||||||||||||||||||||||| ||||||||| | | |||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||| |
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| T |
26340763 |
gaagttgaacttaagttattatgtttcctggattgccattgttgttcaagtcttaagaagacactattttgtttccttgacttgaagagacttccaattc |
26340664 |
T |
|
| Q |
401 |
tttcttttc |
409 |
Q |
| |
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|||||||| |
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| T |
26340663 |
cttcttttc |
26340655 |
T |
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