View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14023_low_37 (Length: 251)
Name: NF14023_low_37
Description: NF14023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14023_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 2817503 - 2817717
Alignment:
| Q |
19 |
attcacccactcttccgataggaaaactctatcaattcggctcgtcgccacactatannnnnnnnnnnnaaattgtatacaaaaatgtagaatccatgaa |
118 |
Q |
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| T |
2817503 |
attcacccactcttccgataggaaaactctatcaattcggctcgtcgccacactatatgtgtgtgtgtgaaattgtatacaaaaatgtagaatccatgaa |
2817602 |
T |
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| Q |
119 |
catgaaattagtaaaagcaagaaagaaatgatgataataaaaaataacaatggagaaaaggcttgaaccgtaagaagaagtagtgaagggatagagagac |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
2817603 |
catgaaattagtaaaagcaagaaagaaatgatgataataaaaaataacaatggagaaaaggcttgaaccgt---aagaagtagtgaagggatagagagac |
2817699 |
T |
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| Q |
219 |
ttgtgggatgattctgtg |
236 |
Q |
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|||||||||||||||||| |
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| T |
2817700 |
ttgtgggatgattctgtg |
2817717 |
T |
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