View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14023_low_46 (Length: 228)
Name: NF14023_low_46
Description: NF14023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14023_low_46 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 53207984 - 53208197
Alignment:
| Q |
1 |
tatgaagggaattactactttgtttgtttatagctatgtgtacaattgggaatcattagtgatattgtactaattaattatctctattattgggttggct |
100 |
Q |
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| T |
53207984 |
tatgaagggaattactactttgtttgtttatagctatgcgtacaattgggaatcattagtgatattgtactaattaattatctctattattgggttggct |
53208083 |
T |
|
| Q |
101 |
tttcaacaaagaattttctattagttatcatcgttcaccaacaactattataatcttggtggtccttgaccttgtttcactcatagtttttgggtggtcc |
200 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53208084 |
tttcaacaaagaattttctattagtggtcatcgttcaccaacaactattataatcttggtggtccttgaccttgtttcactcatagtttttgggtggtcc |
53208183 |
T |
|
| Q |
201 |
ttcttgttatcaat |
214 |
Q |
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|||||||||||||| |
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| T |
53208184 |
ttcttgttatcaat |
53208197 |
T |
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