View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14028_low_24 (Length: 267)
Name: NF14028_low_24
Description: NF14028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14028_low_24 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 8188419 - 8188670
Alignment:
| Q |
16 |
aatgatgcagactttgagttagagcttcaggagttgctggacagtgatgctgacgagaatgcagcggtagaaacccgaaatgagtgtgatggtgctggac |
115 |
Q |
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| T |
8188419 |
aatgatgcagactttgagttagagcttcaggagttgctggacagtgatgctgacgagaatgcagcggtagaaacccgaaatgagtgtgatggtgctggac |
8188518 |
T |
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| Q |
116 |
gacgaccaaagactagacaaaataatcgccggaagagctcttcccaaagtgagagaaaaacattcggacaggttaacaggccactgcggcccattttgcc |
215 |
Q |
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| T |
8188519 |
gacgaccaaagactagacaaaataatcgccggaagagctcttcccaaagtgagagaaaaacattcggacaggttaacaggccactgcggcccattttgcc |
8188618 |
T |
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| Q |
216 |
ttgttggcttaatggacaacttgtttcagggaatggtttgatgcctgaagct |
267 |
Q |
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| T |
8188619 |
ttgttggcttaatggacaacttgtttcagggaatggtttgatgcctgaagct |
8188670 |
T |
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