View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14029_high_17 (Length: 232)
Name: NF14029_high_17
Description: NF14029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14029_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 45071371 - 45071152
Alignment:
| Q |
1 |
atttagtaaagcaataacaaagtgcaagcgcatactaattgtttctagttcatacactttgaagctcatctctatgattaaagaaaacaaatcgcatgcc |
100 |
Q |
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| T |
45071371 |
atttagtaaagcaataacaaagtgcaagcgcatactaattgtttctagttcatacactttgaagctcatctctatgattaaagaaaacaaatcgcatgcc |
45071272 |
T |
|
| Q |
101 |
attattgttccaatctctcacacacaaagtatttggggaaggttcatatgtacac-aaaacttcctcttcaaagtagttttcgtccattataaatgttgc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45071271 |
attattgttccaatctctcacacacaaagtatttggggaaggttcatatgtacacaaaaacttcctcttcaaagtagttttcgtccattataaatgttgc |
45071172 |
T |
|
| Q |
200 |
taggcttaaaatgattttgt |
219 |
Q |
| |
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|||||||||||||||||||| |
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| T |
45071171 |
taggcttaaaatgattttgt |
45071152 |
T |
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