View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1402_low_19 (Length: 316)
Name: NF1402_low_19
Description: NF1402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1402_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 53079233 - 53079085
Alignment:
| Q |
95 |
tatttgtccattttaccctcaaccactacttgttgaagatttgtaacctactctttggaaagtgaatctgttttgtcatnnnnnnnttgatgttgttttc |
194 |
Q |
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| T |
53079233 |
tatttgtccattttaccctcaaccactacttgttgaagatttgtaacctactctttggaaagtgaatctgttttgtcataaaaaaattgatgttgttttc |
53079134 |
T |
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| Q |
195 |
acaattaaataaattgtattaattgtttggtatatatcttctctgtggt |
243 |
Q |
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| T |
53079133 |
acaattaaataaattgtattaattgtttggtatatatcttctttgtggt |
53079085 |
T |
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