View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14030_low_2 (Length: 479)
Name: NF14030_low_2
Description: NF14030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14030_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 116 - 472
Target Start/End: Complemental strand, 37926102 - 37925745
Alignment:
| Q |
116 |
gagattgaatctctaaccaattgatcaagagactcaaacgtctatcacatatacgttagtaattcatcatatattagactacgttagtaattcgtgattg |
215 |
Q |
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| T |
37926102 |
gagattgaatctctaaccaattgatcaagagactcaaacgtctatcacatatatattagtaattcatcatatattagactacgttagtaattcgtgattg |
37926003 |
T |
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| Q |
216 |
tttaaccatcctccgatgcatgaccttttttctcgttcgaggtcattgccatcatgtcatctcctcatagtattgaatcactactttgtacatatgatca |
315 |
Q |
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| T |
37926002 |
tttaaccatcctccgatgcatgatcttttttcttgttagaggtcattgccatcatgtcatctcttcatagtattgaatcactactttgtacatatgatca |
37925903 |
T |
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| Q |
316 |
atgtatttaataaaatcatttggtgctatgattgatttactaattcactgcaggtcttacttgtagttcttgaaggatgtactatcctagtctgggtggt |
415 |
Q |
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| T |
37925902 |
atgtatttaataaaatcatttggtgctatgattgatttactaattcactgtaggtcttacttgtagttcttgaaggatgtactatcctagtctgggtggt |
37925803 |
T |
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| Q |
416 |
gcacatattctagaatctagagtctcgaccttgcttgt-agggtgtagttgatgatgt |
472 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37925802 |
gcacatattctagaatctagagtctcgaccttgcttgtaagggtgtagttgatgatgt |
37925745 |
T |
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