View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14030_low_5 (Length: 277)
Name: NF14030_low_5
Description: NF14030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14030_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 11 - 261
Target Start/End: Original strand, 18297611 - 18297861
Alignment:
| Q |
11 |
tccaagaatatgcgcctccataaaccactggtagggcggtgtaacaaacttcaatcctcacctcatgaaaaaagaatgaaacttagacatacaatagtga |
110 |
Q |
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| T |
18297611 |
tccaacaaaatgcgcctccataaaccaccggtaaggcggtgtaacaggcttcaatcctcacctcatgaaaaaagattgaaacttagacatacaatagtga |
18297710 |
T |
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| Q |
111 |
tttgcactcatcatgataaccaaccgcggcaaagccgacggtttaatgagaagaggtggtgatgccgagggcgagttcaccacccatgtgctgctacaat |
210 |
Q |
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| T |
18297711 |
tttgcactcatcatgataaccaaccgcggcaaagccgggggtttaatgagaagaggtggtgataccgagggcgagttcaccacccatgtgctgctacaat |
18297810 |
T |
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| Q |
211 |
ggatcaaaatgatttggatgtgttgaaataagtgggttcaaacctcgatat |
261 |
Q |
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| T |
18297811 |
ggatcaaaacgatttggatgtgttgaaataagtgggttcaaacctcgatat |
18297861 |
T |
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