View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14031_high_52 (Length: 240)

Name: NF14031_high_52
Description: NF14031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14031_high_52
NF14031_high_52
[»] chr8 (2 HSPs)
chr8 (19-240)||(29273895-29274116)
chr8 (55-209)||(31903728-31903882)
[»] chr1 (3 HSPs)
chr1 (19-240)||(268469-268690)
chr1 (39-174)||(28127858-28127993)
chr1 (33-199)||(28164515-28164681)
[»] chr4 (5 HSPs)
chr4 (19-236)||(18724201-18724418)
chr4 (19-236)||(18679683-18679900)
chr4 (19-236)||(18731620-18731837)
chr4 (19-236)||(18699516-18699733)
chr4 (19-236)||(18655593-18655810)
[»] chr6 (43 HSPs)
chr6 (19-239)||(26861457-26861677)
chr6 (33-240)||(26646334-26646541)
chr6 (33-240)||(26752302-26752509)
chr6 (19-240)||(31284129-31284350)
chr6 (19-240)||(26622817-26623038)
chr6 (19-240)||(26728795-26729016)
chr6 (19-240)||(27677739-27677960)
chr6 (122-240)||(26823784-26823902)
chr6 (19-240)||(27718504-27718725)
chr6 (19-240)||(27724970-27725191)
chr6 (19-240)||(28786119-28786340)
chr6 (19-240)||(28792240-28792461)
chr6 (19-240)||(26802283-26802504)
chr6 (19-240)||(27229073-27229294)
chr6 (19-240)||(27593145-27593366)
chr6 (19-240)||(27611127-27611348)
chr6 (19-240)||(27678787-27679008)
chr6 (19-240)||(27698619-27698840)
chr6 (19-240)||(28780980-28781201)
chr6 (19-240)||(27706527-27706748)
chr6 (122-240)||(27531322-27531440)
chr6 (19-239)||(27338191-27338411)
chr6 (19-239)||(27398931-27399151)
chr6 (38-240)||(26884023-26884225)
chr6 (122-240)||(25579663-25579781)
chr6 (122-240)||(26142809-26142927)
chr6 (122-240)||(26655933-26656051)
chr6 (122-240)||(26761904-26762022)
chr6 (122-240)||(27604830-27604948)
chr6 (85-239)||(28234471-28234625)
chr6 (122-238)||(25481686-25481802)
chr6 (122-240)||(26055870-26055988)
chr6 (122-240)||(26075840-26075958)
chr6 (34-239)||(28185222-28185427)
chr6 (34-239)||(28180970-28181175)
chr6 (162-240)||(25507034-25507112)
chr6 (124-170)||(27665312-27665358)
chr6 (85-239)||(28242711-28242865)
chr6 (55-232)||(26893604-26893781)
chr6 (152-239)||(28149912-28149998)
chr6 (96-239)||(28226868-28227011)
chr6 (122-240)||(25538484-25538602)
chr6 (122-199)||(29825971-29826048)
[»] scaffold1254 (1 HSPs)
scaffold1254 (19-240)||(42-263)
[»] scaffold0419 (1 HSPs)
scaffold0419 (19-240)||(7366-7587)
[»] scaffold0349 (3 HSPs)
scaffold0349 (19-240)||(3547-3768)
scaffold0349 (19-240)||(14480-14701)
scaffold0349 (19-104)||(8062-8147)
[»] scaffold0277 (2 HSPs)
scaffold0277 (19-240)||(4796-5017)
scaffold0277 (19-240)||(13757-13978)
[»] scaffold0038 (3 HSPs)
scaffold0038 (85-239)||(34632-34786)
scaffold0038 (85-239)||(42873-43027)
scaffold0038 (96-239)||(27366-27509)
[»] scaffold0019 (1 HSPs)
scaffold0019 (40-239)||(58408-58607)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 29274116 - 29273895
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  29274116 gctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattg 29274017  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
      |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  29274016 gccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgt 29273917  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||| ||||||    
T  29273916 cattgaagagtctagaattttt 29273895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 31903728 - 31903882
Alignment:
Q  55 tatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatcc 154  Q
    ||||||| ||||||| | || ||||||| ||||| ||||   ||||||||  ||||||||| ||   |||||||||| ||||||  ||| ||||||||||    
T  31903728 tatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatcc 31903827  T
Q  155 acaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcact 209  Q
    ||||||| ||||| |||   ||||||||||||||  ||||||||| | |||||||    
T  31903828 acacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 268690 - 268469
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| | |||| ||||||||||||| ||||||||||    
T  268690 gctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggttttattg 268591  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  268590 gccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgc 268491  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||||||||||    
T  268490 cattgaagagtctaggattttt 268469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 28127993 - 28127858
Alignment:
Q  39 ttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctctt 138  Q
    |||||||||||| || ||||||| ||| ||||| || ||||||| ||| |  ||||||||||||||||| ||||| | ||  |||||||||||||| |||    
T  28127993 ttcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctt 28127894  T
Q  139 actgacaagggaatccacaccttcattgatgattgt 174  Q
      |||||||||||||||||| |||||||||||||||    
T  28127893 tatgacaagggaatccacacattcattgatgattgt 28127858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 28164681 - 28164515
Alignment:
Q  33 ttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaag 132  Q
    |||||||||||||||||| || ||||||| ||| ||||| || |||||||  ||||  ||||||||||||||||| ||||| | ||  |||||||| |||    
T  28164681 ttcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataag 28164582  T
Q  133 gctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatca 199  Q
    || |||   ||||||||||| ||||| ||||||||||||||||| ||| | ||||| || |||||||    
T  28164581 gcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatca 28164515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 18724418 - 18724201
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||| ||||||||| | || ||| ||| ||| ||||| || ||||||| ||| |  ||||||||||||||| | ||||||| ||    
T  18724418 gctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactg 18724319  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||| ||||||||||||||||    
T  18724318 gtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgc 18724219  T
Q  219 cattgaagagtctaggat 236  Q
    ||||||||||||||||||    
T  18724218 cattgaagagtctaggat 18724201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 18679900 - 18679683
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||| | ||||||| | || ||| ||| ||| ||||| || ||||||| ||| |  ||||||||||||||| | ||||||| ||    
T  18679900 gctatgcaatcaccttcctcattctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactg 18679801  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| || ||||||||||||||||||||| ||||||||||||||||    
T  18679800 gtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgc 18679701  T
Q  219 cattgaagagtctaggat 236  Q
    ||||||||||||||||||    
T  18679700 cattgaagagtctaggat 18679683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 18731837 - 18731620
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||| ||||||||| | || ||| ||| ||| ||||| || ||||||| ||| |  ||||||||||||||||| ||||||| ||    
T  18731837 gctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactg 18731738  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
      ||||||||||  ||||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||| ||||||||||||||||    
T  18731737 gccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgc 18731638  T
Q  219 cattgaagagtctaggat 236  Q
    ||||||||||||||||||    
T  18731637 cattgaagagtctaggat 18731620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 18699733 - 18699516
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||| ||||||||| | || ||| ||| ||| ||||| || ||||||| ||| |  |||| |||||||||||| ||||||| ||    
T  18699733 gctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactg 18699634  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| || ||||| ||||||||||||||| ||||||||||||||||    
T  18699633 gccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgc 18699534  T
Q  219 cattgaagagtctaggat 236  Q
    ||||||||||||||||||    
T  18699533 cattgaagagtctaggat 18699516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 18655810 - 18655593
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||| ||||||||||||||| ||||||||| | || ||| ||| ||| ||||| || ||||||| ||| |  ||||||||||||||| | ||||||| ||    
T  18655810 gctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactg 18655711  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| || ||||| ||||||||||||||| ||||||||||||||||    
T  18655710 ggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgc 18655611  T
Q  219 cattgaagagtctaggat 236  Q
    |||| |||||||||||||    
T  18655610 cattcaagagtctaggat 18655593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 26861457 - 26861677
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||| |||||||||||| || || ||||||| ||  |||||||| |||||||  || | ||| |||||||||||  |||||||||  |    
T  26861457 gctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggttttaccg 26861556  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
     | ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  26861557 gtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgc 26861656  T
Q  219 cattgaagagtctaggatttt 239  Q
    ||||||||||||||| |||||    
T  26861657 cattgaagagtctagaatttt 26861677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 26646334 - 26646541
Alignment:
Q  33 ttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaag 132  Q
    |||||||||||||| ||| || || |||| |||||||||||||||||||||||| |  ||||||||||||||||| ||||||| ||  ||||||||||||    
T  26646334 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26646433  T
Q  133 gctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtcta 232  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||| |||||||||| | ||||||||  ||| ||||||||||| ||||    
T  26646434 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26646533  T
Q  233 ggattttt 240  Q
    ||||||||    
T  26646534 ggattttt 26646541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 26752302 - 26752509
Alignment:
Q  33 ttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaag 132  Q
    |||||||||||||| ||| || || |||| |||||||||||||||||||||||| |  ||||||||||||||||| ||||||| ||  ||||||||||||    
T  26752302 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26752401  T
Q  133 gctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtcta 232  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||| |||||||||| | ||||||||  ||| ||||||||||| ||||    
T  26752402 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26752501  T
Q  233 ggattttt 240  Q
    ||||||||    
T  26752502 ggattttt 26752509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 31284129 - 31284350
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||| ||||||||||||||||||| || |||| || ||  ||||| || ||||| |  || |  || |||||||||||  ||||||| |  |    
T  31284129 gctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggtttcaccg 31284228  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  31284229 gcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgc 31284328  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||||||||||    
T  31284329 cattgaagagtctaggattttt 31284350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 26622817 - 26623038
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||| ||||||||||||||||| || |||  || ||  ||||| || ||||| |  || | |||||||||||||||  | ||||| | ||    
T  26622817 gctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactg 26622916  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  26622917 gaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgc 26623016  T
Q  219 cattgaagagtctaggattttt 240  Q
     || ||||||||||||||||||    
T  26623017 tatcgaagagtctaggattttt 26623038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 26728795 - 26729016
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||| ||||||||||||||||| || |||  || ||  ||||| || ||||| |  || | |||||||||||||||  | ||||| | ||    
T  26728795 gctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactg 26728894  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  26728895 gaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgc 26728994  T
Q  219 cattgaagagtctaggattttt 240  Q
     || ||||||||||||||||||    
T  26728995 tatcgaagagtctaggattttt 26729016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27677960 - 27677739
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||||||| ||||||| || ||||  ||||  ||||| || |||||||| || | ||| |||||||||||  | ||||| |  |    
T  27677960 gctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggtttcaccg 27677861  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||  |||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||| | |||||||   ||| ||    
T  27677860 gcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggc 27677761  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||||||||||    
T  27677760 cattgaagagtctaggattttt 27677739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26823784 - 26823902
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||| ||  ||||||| | ||||||||    
T  26823784 atctctacaaggctcttacagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccat 26823883  T
Q  222 tgaagagtctaggattttt 240  Q
    |||||||||||||||||||    
T  26823884 tgaagagtctaggattttt 26823902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27718725 - 27718504
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||||||||| ||||  |||||| ||| ||||| || |||||||  ||||  |||| |||||||||  |  ||||||  |    
T  27718725 gctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccg 27718626  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  27718625 gaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 27718526  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  27718525 cattgatgaatctaggattttt 27718504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27725191 - 27724970
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||||||||| | || ||||||| ||| ||||| || ||||| |  ||||  |||| |||||||||  | |||||||  |    
T  27725191 gctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccg 27725092  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  27725091 gaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 27724992  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  27724991 cattgatgaatctaggattttt 27724970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 28786119 - 28786340
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||||||||| | || ||||||| ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  28786119 gctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccg 28786218  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  28786219 gaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 28786318  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||| ||||| ||||||||||||    
T  28786319 catcgaagaatctaggattttt 28786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 28792240 - 28792461
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||||||||| | || ||||||| ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  28792240 gctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccg 28792339  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  28792340 gaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 28792439  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||| ||||| ||||||||||||    
T  28792440 catcgaagaatctaggattttt 28792461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 26802283 - 26802504
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||| || |||||||| ||||||||| | || ||||||| ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  26802283 gctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgg 26802382  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  26802383 gcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggc 26802482  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||| ||||| ||||||    
T  26802483 cattgaagaatctagaattttt 26802504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 27229073 - 27229294
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||||||||||||| | || | ||||| ||| ||||| || ||||| |  ||||  |||| |||||||||  | |||||||  |    
T  27229073 gctatacaatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccg 27229172  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| | ||||||||| ||| ||    
T  27229173 gcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggc 27229272  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||| ||||||||    
T  27229273 cattgacgaatctcggattttt 27229294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27593366 - 27593145
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||||||| ||||||| || ||||  ||||  ||||| || |||||||  || | ||| |||||||||||  | ||||| |  |    
T  27593366 gctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccg 27593267  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| ||||||||||||||||   ||  |||||||||||  ||||||||| | |||||||   ||| ||    
T  27593266 gcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggc 27593167  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||||||||||    
T  27593166 cattgaagagtctaggattttt 27593145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27611348 - 27611127
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||| | |||||||||| |||||| | || ||||||| ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  27611348 gctatgcaattagcttcctcttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccg 27611249  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  ||| ||    
T  27611248 gaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggc 27611149  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  27611148 cattgatgaatctaggattttt 27611127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 27678787 - 27679008
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||||||||||| ||||||| || ||||  ||||  ||||| || |||||||  || | ||| |||||||||||  | ||||| |  |    
T  27678787 gctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccg 27678886  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| |||||||||||||| |   ||  ||||||||||| |||||||||| | |||||||   ||| ||    
T  27678887 ggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggc 27678986  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||||||||||    
T  27678987 cattgaagagtctaggattttt 27679008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27698840 - 27698619
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||| ||||| | || ||||||| ||| ||||| || ||| |||  ||||  |||| |||||||||  | |||||||  |    
T  27698840 gctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccg 27698741  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  27698740 gaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 27698641  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  27698640 cattgatgaatctaggattttt 27698619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 28780980 - 28781201
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||| ||||||||||||||||||| | || | || || ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  28780980 gctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccg 28781079  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  28781080 gcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 28781179  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||| ||||| ||||||||||||    
T  28781180 catcgaagaatctaggattttt 28781201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27706748 - 27706527
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||||||||| ||||||| ||||||| || ||||  ||||  ||||| || |||||||  || | |||  ||||||||||  | ||||| |  |    
T  27706748 gctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacag 27706649  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||| ||  |||||||||||||||||||||||||||  ||  ||||||||||||| |||||||||||| | |||||||   ||| ||    
T  27706648 gcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggc 27706549  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||||||||||||||||||||||    
T  27706548 cattgaagagtctaggattttt 27706527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 27531440 - 27531322
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | |||||||  | ||||||||    
T  27531440 atctctacaaggctcttactgacaagggaatctataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccat 27531341  T
Q  222 tgaagagtctaggattttt 240  Q
    |||| | ||||||||||||    
T  27531340 tgaaaaatctaggattttt 27531322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 27338411 - 27338191
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||||||||||| |||||||||||||||||| || | ||| | ||  ||||| || |||||||  ||||  | || |||||||| | | |||||||  |    
T  27338411 gctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccg 27338312  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||| ||||||||||||| | ||||||||||||||    || ||| ||||||| ||||||| || | ||||||| | ||| ||    
T  27338311 gcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggc 27338212  T
Q  219 cattgaagagtctaggatttt 239  Q
    |||||||||||||||||||||    
T  27338211 cattgaagagtctaggatttt 27338191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 27399151 - 27398931
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||||||||||| |||||||||||||||||| || | ||| | ||  ||||| || |||||||  ||||  | || |||||||| | | |||||||  |    
T  27399151 gctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccg 27399052  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||| ||||||||||||| | ||||||||||||||    || ||| ||||||| ||||||| || | ||||||| | ||| ||    
T  27399051 gcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggc 27398952  T
Q  219 cattgaagagtctaggatttt 239  Q
    |||||||||||||||||||||    
T  27398951 cattgaagagtctaggatttt 27398931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 240
Target Start/End: Original strand, 26884023 - 26884225
Alignment:
Q  38 cttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctct 137  Q
    ||||||||||| | || ||||||| ||| ||||| || |||||||  || | ||| |||||||||||  ||||||| | ||   ||||||||||||||||    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  138 tactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatt 237  Q
    |||| |||||||||||||||||||||||||||||  | | |||| ||||||    ||||||| | ||||||||  ||| ||||||||||| ||||| |||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 26884222  T
Q  238 ttt 240  Q
    |||    
T  26884223 ttt 26884225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 25579663 - 25579781
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||| |||||||||  |||||||||||| |  |||||| ||||||||  ||| ||||||||||| |||||||||| | ||||||| | ||| |||||    
T  25579663 atctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccat 25579762  T
Q  222 tgaagagtctaggattttt 240  Q
    |||||| ||||||||||||    
T  25579763 tgaagaatctaggattttt 25579781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26142809 - 26142927
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||| |||||||||  |||||||||||| |  || ||||||||||||  ||| ||| ||||||| |||||||||| | ||||||| | ||| |||||    
T  26142809 atctctataaggctcttgttgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccat 26142908  T
Q  222 tgaagagtctaggattttt 240  Q
    |||||| ||||||||||||    
T  26142909 tgaagaatctaggattttt 26142927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26655933 - 26656051
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||||||   ||| ||||  ||||| |||||||||| | |||||||||  || |||||    
T  26655933 atctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccat 26656032  T
Q  222 tgaagagtctaggattttt 240  Q
    |||||| || |||||||||    
T  26656033 tgaagaatccaggattttt 26656051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26761904 - 26762022
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||||||   ||| ||||  ||||| |||||||||| | |||||||||  || |||||    
T  26761904 atctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccat 26762003  T
Q  222 tgaagagtctaggattttt 240  Q
    |||||| || |||||||||    
T  26762004 tgaagaatccaggattttt 26762022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 27604948 - 27604830
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||   ||| |||| |||||| |||||||||| | || ||||   ||| |||||    
T  27604948 atctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccat 27604849  T
Q  222 tgaagagtctaggattttt 240  Q
    ||| || || |||||||||    
T  27604848 tgatgaatccaggattttt 27604830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 28234471 - 28234625
Alignment:
Q  85 tttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaa 184  Q
    |||| ||| |||||||||||  |||||||||  ||  ||||||| |  ||||||  | ||||||||||||||||||||||||||||  | || ||||||     
T  28234471 tttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaag 28234570  T
Q  185 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    |||| |||||||| | | |||||||   ||| |||||||||||||||||||||||    
T  28234571 gaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggatttt 28234625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 25481686 - 25481802
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||| |||||||||  |||||||||||| |  || |||||||||||   ||| ||||||||||| |||||||||| | ||||||| | ||| |||||    
T  25481686 atctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccat 25481785  T
Q  222 tgaagagtctaggattt 238  Q
    |||||| ||||||||||    
T  25481786 tgaagaatctaggattt 25481802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26055870 - 26055988
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||| |||||||||  ||||||||||||  | || |||||||||||   ||| ||||||||||| |||||||||| ||||||||| | ||| |||||    
T  26055870 atctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccat 26055969  T
Q  222 tgaagagtctaggattttt 240  Q
     ||||| ||| ||||||||    
T  26055970 cgaagaatctgggattttt 26055988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26075840 - 26075958
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||| |||||||||  ||||||||||||  | || |||||||||||   ||| ||||||||||| |||||||||| ||||||||| | ||| |||||    
T  26075840 atctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccat 26075939  T
Q  222 tgaagagtctaggattttt 240  Q
     ||||| ||| ||||||||    
T  26075940 cgaagaatctgggattttt 26075958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 28185222 - 28185427
Alignment:
Q  34 tcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaagg 133  Q
    ||||| ||||||||  |||| ||||||| ||||||  | || ||||| | ||||| ||| |||||||||||| || |||||| ||   ||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  134 ctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctag 233  Q
    |||||  ||||||||||||||  |||||||| |||||  | || |||||| |||| || ||||| | |||||||||   ||| |||||||||||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  234 gatttt 239  Q
    ||||||    
T  28185422 gatttt 28185427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 28180970 - 28181175
Alignment:
Q  34 tcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaagg 133  Q
    ||||| ||||||||  |||| ||||||| ||||||  | |  ||||| | ||||| |||  ||||||||||| ||||||||| ||   ||||| | |  |    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  134 ctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctag 233  Q
    |||||  ||||||||||||||  |||||||| |||||  | || |||||| |||| || ||||| | |||||||||   ||| |||||||||||||||||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  234 gatttt 239  Q
    ||||||    
T  28181170 gatttt 28181175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 25507112 - 25507034
Alignment:
Q  162 cattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggattttt 240  Q
    ||||||||||||||| ||  ||||||| |||||||||| | ||||| ||| ||  ||||||||||| ||||||||||||    
T  25507112 cattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggattttt 25507034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 27665358 - 27665312
Alignment:
Q  124 ctctacaaggctcttactgacaagggaatccacaccttcattgatga 170  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatga 27665312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 28242711 - 28242865
Alignment:
Q  85 tttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaa 184  Q
    |||| ||| |||||||||||| ||||||||| ||   |||||||||| | ||||  | | |||||||| | |||||||||||||||  | ||||||| |     
T  28242711 tttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccag 28242810  T
Q  185 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    |||| ||  |||| | | |||||||   ||| |||||||||||||||||||||||    
T  28242811 gaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggatttt 28242865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 232
Target Start/End: Complemental strand, 26893781 - 26893604
Alignment:
Q  55 tatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatcc 154  Q
    ||||||| ||||||| | ||||||||||| |||| ||||  ||||||||||  ||||||||  | |||||| || || ||||||  ||| |  ||||| |    
T  26893781 tatggattcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattc 26893682  T
Q  155 acaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtcta 232  Q
    |||||||||||||||||   || ||||| ||||| || ||||||  | |||||||   ||| || |||||||||||||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtcta 26893604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 28149912 - 28149998
Alignment:
Q  152 tccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    ||||||||||||||||||||   || ||| || ||||||| ||||||| | ||||||||  ||| |||||||||||||| ||||||||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggatttt 28149998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 28226868 - 28227011
Alignment:
Q  96 tgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaa 195  Q
    |||||||||| ||||||||| ||   |||||||||  | ||||  | | |||||||| ||||| ||| |||||||| | || |||||| |||| ||||||    
T  28226868 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 28226967  T
Q  196 atcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    || | |||||||||   ||| | ||||||||| |||||||||||    
T  28226968 ataacatcatcacttttcaaggtcattgaagaatctaggatttt 28227011  T

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Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 25538484 - 25538602
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccat 221  Q
    ||||||| |||||||||  ||||||||||||    || ||||| ||||||  ||| ||| ||||||| |||||||||| | ||||||| | ||| |||||    
T  25538484 atctctataaggctcttgttgacaagggaattagtactttcatagatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccat 25538583  T
Q  222 tgaagagtctaggattttt 240  Q
     ||||| ||||| ||||||    
T  25538584 cgaagaatctagaattttt 25538602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 29825971 - 29826048
Alignment:
Q  122 atctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatca 199  Q
    |||||||||| ||||| |||||||||  ||| | |||||||||||||||    || |||||||||||||| |||||||    
T  29825971 atctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatca 29826048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 263 - 42
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||||||||||||| |||||||||||||| | ||||||| || ||| ||||| || ||||| |  ||||  |||| |||||||||  | |||||||  |    
T  263 gctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccg 164  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  163 gcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 64  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||| ||||| ||||||||||||    
T  63 catcgaagaatctaggattttt 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 7366 - 7587
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||||||||||||| |||||||||||||| | ||||||| || ||| ||||| || ||||| |  ||||  |||| |||||||||  | |||||||  |    
T  7366 gctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccg 7465  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  7466 gcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 7565  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||| ||||| ||||||||||||    
T  7566 catcgaagaatctaggattttt 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 3768 - 3547
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||||||||| | || ||||||| ||| ||||| || ||||| |  ||||  |||| |||||||||  | |||||||  |    
T  3768 gctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccg 3669  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  3668 gaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 3569  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  3568 cattgatgaatctaggattttt 3547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 14701 - 14480
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||| ||||| | || ||||||| ||| ||||| || ||| |||  ||||  |||| |||||||||  | |||||||  |    
T  14701 gctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccg 14602  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  14601 gaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 14502  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  14501 cattgatgaatctaggattttt 14480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 8147 - 8062
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcg 104  Q
    ||||| |||||||||||||| ||||||||| ||||  |||||| ||| ||||| || |||||||  ||||  |||| |||||||||    
T  8147 gctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 5017 - 4796
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    ||||| |||||||||||||| ||||||||| | || ||||||| ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  5017 gctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccg 4918  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | |||| |||  ||| ||    
T  4917 gaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggc 4818  T
Q  219 cattgaagagtctaggattttt 240  Q
    |||||| || ||||||||||||    
T  4817 cattgatgaatctaggattttt 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 13978 - 13757
Alignment:
Q  19 gctatgcaatcaccttcctcttcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattg 118  Q
    |||||||||| ||||||||||||||||||| | || | || || ||| ||||| || |||||||  ||||  |||| |||||||||  | |||||||  |    
T  13978 gctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccg 13879  T
Q  119 atcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgc 218  Q
       |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| ||    
T  13878 gcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggc 13779  T
Q  219 cattgaagagtctaggattttt 240  Q
    ||| ||||| ||||||||||||    
T  13778 catcgaagaatctaggattttt 13757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 34632 - 34786
Alignment:
Q  85 tttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaa 184  Q
    |||| ||| |||||||||||  |||||||||  ||  ||||||| |  ||||||  | ||||||||||||||||||||||||||||  | || ||||||     
T  34632 tttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaag 34731  T
Q  185 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    |||| |||||||| | | |||||||   ||| |||||||||||||||||||||||    
T  34732 gaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggatttt 34786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 42873 - 43027
Alignment:
Q  85 tttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaa 184  Q
    |||| ||| |||||||||||| ||||||||| ||   |||||||||| | ||||  | | |||||||| | |||||||||||||||  | ||||||| |     
T  42873 tttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccag 42972  T
Q  185 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    |||| ||  |||| | | |||||||   ||| |||||||||||||||||||||||    
T  42973 gaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggatttt 43027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 27366 - 27509
Alignment:
Q  96 tgacactcgtgatggttttattgatcatctctacaaggctcttactgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaa 195  Q
    |||||||||| ||||||||| ||   |||||||||  | ||||  | | |||||||| ||||| ||| |||||||| | || |||||| |||| ||||||    
T  27366 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 27465  T
Q  196 atcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
    || | |||||||||   ||| | ||||||||| |||||||||||    
T  27466 ataacatcatcacttttcaaggtcattgaagaatctaggatttt 27509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 58607 - 58408
Alignment:
Q  40 tcctcttcaatctcatatggatacacctaccaggtcttcctcaactttaaaggcagtgacactcgtgatggttttattgatcatctctacaaggctctta 139  Q
    ||||||||  |||| ||||||| |||||| || || ||||| | ||||| |||  ||||||||||  ||||||||| ||   |||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  140 ctgacaagggaatccacaccttcattgatgattgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 239  Q
     ||||||||||||||  |||||||| |||||  | || |||||| |||| || ||||| | | |||||||   ||| |||||| ||||||||||||||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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