View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14031_low_32 (Length: 337)
Name: NF14031_low_32
Description: NF14031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14031_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 8829606 - 8829302
Alignment:
| Q |
11 |
tagattattctaggattttaggcaaacttgagttggaacttggatctacatgtttaccatgagagtctggtatcaacataatggcatctgtggagtcttt |
110 |
Q |
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| T |
8829606 |
tagattatcctaggattttaggcaaacttgagttggaacttggatctacatgtttaccatgagagtctggtatcaacataatggcatctgtggagtcttt |
8829507 |
T |
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| Q |
111 |
taaccatgcagcaattagtttaatataaactataaatagtatgagaggaagtcataataagttttccaattcaattcatcatgttgttcacaatacaagc |
210 |
Q |
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| T |
8829506 |
taaccatgcagcaattagtttaatataaactataaatagtatgagaggaagtca------gttttccaattcaattcatcatgttgttcacaatacaagc |
8829413 |
T |
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| Q |
211 |
aacactttctcaagacagtggagggggaggcaaatcatgttttacatcatgataatggtcatggtaatcttcatcataacttggaatttttgcattgctt |
310 |
Q |
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| T |
8829412 |
aacactttctcaagacagtggagggggaggcaaatcatgttttacatcatgataatggtcatggtaatcttcatcataacttggaatttttgcattgctt |
8829313 |
T |
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| Q |
311 |
tgaatcattga |
321 |
Q |
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| T |
8829312 |
tgaatcattga |
8829302 |
T |
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